.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (659_bGc-T1-TRNA-1_A23MVY2LT4_2)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/bd11cbe59594bd9b9d355f57397cd5/.command.err
Size: 545 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (659_bGc-T1-TRNA-1_A23MVY2LT4_2)
Attempt

Content

Processing Kallisto file: 659_bGc-T1-TRNA-1_A23MVY2LT4_2/abundance.h5
Successfully converted 659_bGc-T1-TRNA-1_A23MVY2LT4_2/abundance.h5 to 659_bGc-T1-TRNA-1_A23MVY2LT4_2_kallisto_mqc.tsv
  Sample: 659_bGc-T1-TRNA-1_A23MVY2LT4_2
  Mean Fragment Length: 151.6 bp
  Median Fragment Length: 140.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 0.965%
  pct_hk_est_counts: 0.405%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.011%
  pct_ribo_tpm: 3.004%
  pct_hk_tpm: 0.607%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.09%