Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/78084d7c92299e23f914d8b886611d/659_bGc-T1-TRNA-1_A23MVY2LT4_2
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/bd11cbe59594bd9b9d355f57397cd5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/bd11cbe59594bd9b9d355f57397cd5/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/84d0c5c1770398d3f2d9464220c1e6/659_bGc-T1-TRNA-1_A23MVY2LT4_2.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bGc-T1-TRNA-1_A23MVY2LT4_2/abundance.h5
Successfully converted 659_bGc-T1-TRNA-1_A23MVY2LT4_2/abundance.h5 to 659_bGc-T1-TRNA-1_A23MVY2LT4_2_kallisto_mqc.tsv
  Sample: 659_bGc-T1-TRNA-1_A23MVY2LT4_2
  Mean Fragment Length: 151.6 bp
  Median Fragment Length: 140.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 0.965%
  pct_hk_est_counts: 0.405%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.011%
  pct_ribo_tpm: 3.004%
  pct_hk_tpm: 0.607%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.09%