-ctat genome lib [/tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.RFLIPaAyzm/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary
-sample contains 168642470 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir -J /tmp/nxf.RFLIPaAyzm/659_Dl-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction -O /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.RFLIPaAyzm/659_Dl-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[1660000], rate=58691.81/min -building interval tree based on /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[1660000], rate=48943.49/min -building interval tree based on /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[1650000], rate=46808.51/min -building interval tree based on /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[470000], rate=31298.56/min
[480000], rate=31067.96/min
[490000], rate=30785.34/min
[500000], rate=30518.82/min
[510000], rate=30327.06/min
[520000], rate=30115.83/min
[530000], rate=29859.15/min
[540000], rate=29697.53/min
[550000], rate=29702.97/min
[560000], rate=29447.85/min
[570000], rate=29482.76/min
[580000], rate=29617.02/min
[590000], rate=29648.24/min
[600000], rate=29459.90/min
[610000], rate=29444.89/min
[620000], rate=29453.68/min
[630000], rate=29554.34/min
[640000], rate=29629.63/min
[650000], rate=29702.97/min
[660000], rate=29729.73/min
[670000], rate=29777.78/min
[680000], rate=29824.56/min
[690000], rate=29913.29/min
[700000], rate=29978.59/min
[710000], rate=30084.75/min
[720000], rate=30167.60/min
[730000], rate=30290.46/min
[740000], rate=30410.96/min
[750000], rate=30549.90/min
[760000], rate=30707.07/min
[770000], rate=30882.35/min
[780000], rate=31055.08/min
[790000], rate=31266.49/min
[800000], rate=31311.15/min
[810000], rate=31537.96/min
[820000], rate=31701.03/min
[830000], rate=31943.55/min
[840000], rate=32183.91/min
[850000], rate=32422.12/min
[860000], rate=32534.68/min
[870000], rate=32625.00/min
[880000], rate=32856.25/min
[890000], rate=33044.55/min
[900000], rate=32906.76/min
[910000], rate=32694.61/min
[920000], rate=32547.17/min
[930000], rate=32669.79/min
[940000], rate=32809.77/min
[950000], rate=32986.11/min
[960000], rate=32914.29/min
[970000], rate=32788.73/min
[980000], rate=32978.13/min
[990000], rate=33147.32/min
[1000000], rate=33333.33/min
[1010000], rate=33480.66/min
[1020000], rate=33589.46/min
[1030000], rate=33752.05/min
[1040000], rate=33913.04/min
[1050000], rate=34072.47/min
[1060000], rate=34248.79/min
[1070000], rate=34423.59/min
[1080000], rate=34578.44/min
[1090000], rate=34768.74/min
[1100000], rate=34939.12/min
[1110000], rate=35108.07/min
[1120000], rate=35294.12/min
[1130000], rate=35478.81/min
[1140000], rate=35662.15/min
[1150000], rate=35862.79/min
[1160000], rate=36080.87/min
[1170000], rate=36279.07/min
[1180000], rate=36067.24/min
[1190000], rate=35771.54/min
[1200000], rate=35538.01/min
[1210000], rate=35483.87/min
[1220000], rate=35465.12/min
[1230000], rate=35429.67/min
[1240000], rate=35378.03/min
[1250000], rate=34851.30/min
[1260000], rate=34100.14/min
[1270000], rate=33465.09/min
[1280000], rate=33391.30/min
[1290000], rate=33347.69/min
[1300000], rate=33319.09/min
[1310000], rate=33305.08/min
[1320000], rate=33263.33/min
[1330000], rate=33208.49/min
[1340000], rate=33168.32/min
[1350000], rate=33183.12/min
[1360000], rate=33197.72/min
[1370000], rate=33212.12/min
[1380000], rate=33253.01/min
[1390000], rate=33320.02/min
[1400000], rate=33293.70/min
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[1420000], rate=33464.26/min
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[1440000], rate=33644.86/min
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[1480000], rate=34022.99/min
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[1510000], rate=34396.36/min
[1520000], rate=34234.23/min
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[1540000], rate=33747.26/min
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[1570000], rate=32914.05/min
[1580000], rate=32543.77/min
[1590000], rate=32175.38/min
[1600000], rate=32182.37/min
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[1620000], rate=32217.43/min
[1630000], rate=32224.05/min
[1640000], rate=32220.04/min
[1650000], rate=32300.16/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir --filt_file /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
6000000.00 reads per min processed...
4800000.00 reads per min processed...
4285714.29 reads per min processed...
4500000.00 reads per min processed...
4200000.00 reads per min processed...
4000000.00 reads per min processed...
4153846.15 reads per min processed...
4000000.00 reads per min processed...
3882352.94 reads per min processed...
4000000.00 reads per min processed...
3900000.00 reads per min processed...
4000000.00 reads per min processed...
3913043.48 reads per min processed...
3840000.00 reads per min processed...
3777777.78 reads per min processed...
3724137.93 reads per min processed...
3677419.35 reads per min processed...
3636363.64 reads per min processed...
3600000.00 reads per min processed...
3567567.57 reads per min processed...
3538461.54 reads per min processed...
3512195.12 reads per min processed...
3571428.57 reads per min processed...
3545454.55 reads per min processed...
3521739.13 reads per min processed...
3500000.00 reads per min processed...
3551020.41 reads per min processed...
3529411.76 reads per min processed...
3509433.96 reads per min processed...
3490909.09 reads per min processed...
3535714.29 reads per min processed...
3578947.37 reads per min processed...
3620689.66 reads per min processed...
3600000.00 reads per min processed...
3580645.16 reads per min processed...
3562500.00 reads per min processed...
3600000.00 reads per min processed...
3582089.55 reads per min processed...
3617647.06 reads per min processed...
3600000.00 reads per min processed...
3633802.82 reads per min processed...
3616438.36 reads per min processed...
3600000.00 reads per min processed...
3584415.58 reads per min processed...
3569620.25 reads per min processed...
3600000.00 reads per min processed...
3585365.85 reads per min processed...
3571428.57 reads per min processed...
3558139.53 reads per min processed...
3586206.90 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.RFLIPaAyzm/659_Dl-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -135976.866619
EM: Round [1] log likelihood: -135893.110379
EM: Round [2] log likelihood: -135858.912331
EM: Round [3] log likelihood: -135841.554786
EM: Round [4] log likelihood: -135831.976400
EM: Round [5] log likelihood: -135826.461896
EM: Round [6] log likelihood: -135823.182175
EM: Round [7] log likelihood: -135821.167380
EM: Round [8] log likelihood: -135819.886990
EM: Round [9] log likelihood: -135819.044718
EM: Round [10] log likelihood: -135818.471516
EM: Round [11] log likelihood: -135818.068533
EM: Round [12] log likelihood: -135817.776391
EM: Round [13] log likelihood: -135817.558425
EM: Round [14] log likelihood: -135817.391382
EM: Round [15] log likelihood: -135817.260141
EM: Round [16] log likelihood: -135817.154633
EM: Round [17] log likelihood: -135817.068013
EM: Round [18] log likelihood: -135816.995529
EM: Round [19] log likelihood: -135816.933825
EM: Round [20] log likelihood: -135816.880486
EM: Round [21] log likelihood: -135816.833749
EM: Round [22] log likelihood: -135816.792303
EM: Round [23] log likelihood: -135816.755165
EM: Round [24] log likelihood: -135816.721581
EM: Round [25] log likelihood: -135816.690968
EM: Round [26] log likelihood: -135816.662872
EM: Round [27] log likelihood: -135816.636929
EM: Round [28] log likelihood: -135816.612849
EM: Round [29] log likelihood: -135816.590396
EM: Round [30] log likelihood: -135816.569376
EM: Round [31] log likelihood: -135816.549630
EM: Round [32] log likelihood: -135816.531023
EM: Round [33] log likelihood: -135816.513442
EM: Round [34] log likelihood: -135816.496790
EM: Round [35] log likelihood: -135816.480984
EM: Round [36] log likelihood: -135816.465954
EM: Round [37] log likelihood: -135816.451637
EM: Round [38] log likelihood: -135816.437978
EM: Round [39] log likelihood: -135816.424930
EM: Round [40] log likelihood: -135816.412450
EM: Round [41] log likelihood: -135816.400500
EM: Round [42] log likelihood: -135816.389047
EM: Round [43] log likelihood: -135816.378058
EM: Round [44] log likelihood: -135816.367508
EM: Round [45] log likelihood: -135816.357371
EM: Round [46] log likelihood: -135816.347623
EM: Round [47] log likelihood: -135816.338245
EM: Round [48] log likelihood: -135816.329216
EM: Round [49] log likelihood: -135816.320520
EM: Round [50] log likelihood: -135816.312139
EM: Round [51] log likelihood: -135816.304059
EM: Round [52] log likelihood: -135816.296266
EM: Round [53] log likelihood: -135816.288746
EM: Round [54] log likelihood: -135816.281487
EM: Round [55] log likelihood: -135816.274478
EM: Round [56] log likelihood: -135816.267708
EM: Round [57] log likelihood: -135816.261167
EM: Round [58] log likelihood: -135816.254845
EM: Round [59] log likelihood: -135816.248733
EM: Round [60] log likelihood: -135816.242823
EM: Round [61] log likelihood: -135816.237107
EM: Round [62] log likelihood: -135816.231577
EM: Round [63] log likelihood: -135816.226225
EM: Round [64] log likelihood: -135816.221046
EM: Round [65] log likelihood: -135816.216032
EM: Round [66] log likelihood: -135816.211178
EM: Round [67] log likelihood: -135816.206476
EM: Round [68] log likelihood: -135816.201923
EM: Round [69] log likelihood: -135816.197511
EM: Round [70] log likelihood: -135816.193237
EM: Round [71] log likelihood: -135816.189095
EM: Round [72] log likelihood: -135816.185081
EM: Round [73] log likelihood: -135816.181189
EM: Round [74] log likelihood: -135816.177416
EM: Round [75] log likelihood: -135816.173758
EM: Round [76] log likelihood: -135816.170210
EM: Round [77] log likelihood: -135816.166769
EM: Round [78] log likelihood: -135816.163431
EM: Round [79] log likelihood: -135816.160193
EM: Round [80] log likelihood: -135816.157050
EM: Round [81] log likelihood: -135816.154001
EM: Round [82] log likelihood: -135816.151041
EM: Round [83] log likelihood: -135816.148169
EM: Round [84] log likelihood: -135816.145380
EM: Round [85] log likelihood: -135816.142672
EM: Round [86] log likelihood: -135816.140043
EM: Round [87] log likelihood: -135816.137490
EM: Round [88] log likelihood: -135816.135010
EM: Round [89] log likelihood: -135816.132602
EM: Round [90] log likelihood: -135816.130262
EM: Round [91] log likelihood: -135816.127988
EM: Round [92] log likelihood: -135816.125779
EM: Round [93] log likelihood: -135816.123633
EM: Round [94] log likelihood: -135816.121547
EM: Round [95] log likelihood: -135816.119519
EM: Round [96] log likelihood: -135816.117548
EM: Round [97] log likelihood: -135816.115631
EM: Round [98] log likelihood: -135816.113768
EM: Round [99] log likelihood: -135816.111956
EM: Round [100] log likelihood: -135816.110194
EM: Round [101] log likelihood: -135816.108481
EM: Round [102] log likelihood: -135816.106814
EM: Round [103] log likelihood: -135816.105192
EM: Round [104] log likelihood: -135816.103615
EM: Round [105] log likelihood: -135816.102080
EM: Round [106] log likelihood: -135816.100586
EM: Round [107] log likelihood: -135816.099133
EM: Round [108] log likelihood: -135816.097718
EM: Round [109] log likelihood: -135816.096341
EM: Round [110] log likelihood: -135816.095000
EM: Round [111] log likelihood: -135816.093695
EM: Round [112] log likelihood: -135816.092424
EM: Round [113] log likelihood: -135816.091187
EM: Round [114] log likelihood: -135816.089982
EM: Round [115] log likelihood: -135816.088808
EM: Round [116] log likelihood: -135816.087665
EM: Round [117] log likelihood: -135816.086552
EM: Round [118] log likelihood: -135816.085467
EM: Round [119] log likelihood: -135816.084410
EM: Round [120] log likelihood: -135816.083380
EM: Round [121] log likelihood: -135816.082376
EM: Round [122] log likelihood: -135816.081397
EM: Round [123] log likelihood: -135816.080444
EM: Round [124] log likelihood: -135816.079514
EM: Round [125] log likelihood: -135816.078608
EM: Round [126] log likelihood: -135816.077725
EM: Round [127] log likelihood: -135816.076863
EM: Round [128] log likelihood: -135816.076023
EM: Round [129] log likelihood: -135816.075204
EM: Round [130] log likelihood: -135816.074405
EM: Round [131] log likelihood: -135816.073625
EM: Round [132] log likelihood: -135816.072865
EM: Round [133] log likelihood: -135816.072123
EM: Round [134] log likelihood: -135816.071399
EM: Round [135] log likelihood: -135816.070693
EM: Round [136] log likelihood: -135816.070003
EM: Round [137] log likelihood: -135816.069331
EM: Round [138] log likelihood: -135816.068674
EM: Round [139] log likelihood: -135816.068033
EM: Round [140] log likelihood: -135816.067407
EM: Round [141] log likelihood: -135816.066796
EM: Round [142] log likelihood: -135816.066200
EM: Round [143] log likelihood: -135816.065617
EM: Round [144] log likelihood: -135816.065048
EM: Round [145] log likelihood: -135816.064492
EM: Round [146] log likelihood: -135816.063950
EM: Round [147] log likelihood: -135816.063419
EM: Round [148] log likelihood: -135816.062901
EM: Round [149] log likelihood: -135816.062395
EM: Round [150] log likelihood: -135816.061901
EM: Round [151] log likelihood: -135816.061417
EM: Round [152] log likelihood: -135816.060945
EM: Round [153] log likelihood: -135816.060483
EM: Round [154] log likelihood: -135816.060032
EM: Round [155] log likelihood: -135816.059591
EM: Round [156] log likelihood: -135816.059160
EM: Round [157] log likelihood: -135816.058738
EM: Round [158] log likelihood: -135816.058326
EM: Round [159] log likelihood: -135816.057922
EM: Round [160] log likelihood: -135816.057528
EM: Round [161] log likelihood: -135816.057142
EM: Round [162] log likelihood: -135816.056765
EM: Round [163] log likelihood: -135816.056396
EM: Round [164] log likelihood: -135816.056035
EM: Round [165] log likelihood: -135816.055682
EM: Round [166] log likelihood: -135816.055336
EM: Round [167] log likelihood: -135816.054998
EM: Round [168] log likelihood: -135816.054667
EM: Round [169] log likelihood: -135816.054343
EM: Round [170] log likelihood: -135816.054026
EM: Round [171] log likelihood: -135816.053715
EM: Round [172] log likelihood: -135816.053411
EM: Round [173] log likelihood: -135816.053114
EM: Round [174] log likelihood: -135816.052823
EM: Round [175] log likelihood: -135816.052537
EM: Round [176] log likelihood: -135816.052258
EM: Round [177] log likelihood: -135816.051984
EM: Round [178] log likelihood: -135816.051716
EM: Round [179] log likelihood: -135816.051454
EM: Round [180] log likelihood: -135816.051197
EM: Round [181] log likelihood: -135816.050945
EM: Round [182] log likelihood: -135816.050698
EM: Round [183] log likelihood: -135816.050457
EM: Round [184] log likelihood: -135816.050220
EM: Round [185] log likelihood: -135816.049988
EM: Round [186] log likelihood: -135816.049760
EM: Round [187] log likelihood: -135816.049537
EM: Round [188] log likelihood: -135816.049319
EM: Round [189] log likelihood: -135816.049104
EM: Round [190] log likelihood: -135816.048894
EM: Round [191] log likelihood: -135816.048689
EM: Round [192] log likelihood: -135816.048487
EM: Round [193] log likelihood: -135816.048289
EM: Round [194] log likelihood: -135816.048095
EM: Round [195] log likelihood: -135816.047905
EM: Round [196] log likelihood: -135816.047718
EM: Round [197] log likelihood: -135816.047535
EM: Round [198] log likelihood: -135816.047355
EM: Round [199] log likelihood: -135816.047179
EM: Round [200] log likelihood: -135816.047006
EM: Round [201] log likelihood: -135816.046837
EM: Round [202] log likelihood: -135816.046671
EM: Round [203] log likelihood: -135816.046508
EM: Round [204] log likelihood: -135816.046348
EM: Round [205] log likelihood: -135816.046190
EM: Round [206] log likelihood: -135816.046036
EM: Round [207] log likelihood: -135816.045885
EM: Round [208] log likelihood: -135816.045737
EM: Round [209] log likelihood: -135816.045591
EM: Round [210] log likelihood: -135816.045448
EM: Round [211] log likelihood: -135816.045307
EM: Round [212] log likelihood: -135816.045170
EM: Round [213] log likelihood: -135816.045034
EM: Round [214] log likelihood: -135816.044901
EM: Round [215] log likelihood: -135816.044771
EM: Round [216] log likelihood: -135816.044643
EM: Round [217] log likelihood: -135816.044517
EM: Round [218] log likelihood: -135816.044394
EM: Round [219] log likelihood: -135816.044272
EM: Round [220] log likelihood: -135816.044153
EM: Round [221] log likelihood: -135816.044036
EM: Round [222] log likelihood: -135816.043921
EM: Round [223] log likelihood: -135816.043808
EM: Round [224] log likelihood: -135816.043697
EM: Round [225] log likelihood: -135816.043588
EM: Round [226] log likelihood: -135816.043481
EM: Round [227] log likelihood: -135816.043376
EM: Round [228] log likelihood: -135816.043273
EM: Round [229] log likelihood: -135816.043171
EM: Round [230] log likelihood: -135816.043072
EM: Stopping iterations at round 230 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -135877.038389
EM: Round [1] log likelihood: -135806.605177
EM: Round [2] log likelihood: -135778.214629
EM: Round [3] log likelihood: -135764.002390
EM: Round [4] log likelihood: -135756.256323
EM: Round [5] log likelihood: -135751.835083
EM: Round [6] log likelihood: -135749.220019
EM: Round [7] log likelihood: -135747.620939
EM: Round [8] log likelihood: -135746.610687
EM: Round [9] log likelihood: -135745.951768
EM: Round [10] log likelihood: -135745.508631
EM: Round [11] log likelihood: -135745.201801
EM: Round [12] log likelihood: -135744.983378
EM: Round [13] log likelihood: -135744.823706
EM: Round [14] log likelihood: -135744.703951
EM: Round [15] log likelihood: -135744.611877
EM: Round [16] log likelihood: -135744.539366
EM: Round [17] log likelihood: -135744.480931
EM: Round [18] log likelihood: -135744.432801
EM: Round [19] log likelihood: -135744.392342
EM: Round [20] log likelihood: -135744.357689
EM: Round [21] log likelihood: -135744.327505
EM: Round [22] log likelihood: -135744.300816
EM: Round [23] log likelihood: -135744.276906
EM: Round [24] log likelihood: -135744.255241
EM: Round [25] log likelihood: -135744.235419
EM: Round [26] log likelihood: -135744.217133
EM: Round [27] log likelihood: -135744.200146
EM: Round [28] log likelihood: -135744.184271
EM: Round [29] log likelihood: -135744.169363
EM: Round [30] log likelihood: -135744.155303
EM: Round [31] log likelihood: -135744.141998
EM: Round [32] log likelihood: -135744.129367
EM: Round [33] log likelihood: -135744.117347
EM: Round [34] log likelihood: -135744.105883
EM: Round [35] log likelihood: -135744.094929
EM: Round [36] log likelihood: -135744.084446
EM: Round [37] log likelihood: -135744.074398
EM: Round [38] log likelihood: -135744.064757
EM: Round [39] log likelihood: -135744.055496
EM: Round [40] log likelihood: -135744.046591
EM: Round [41] log likelihood: -135744.038022
EM: Round [42] log likelihood: -135744.029770
EM: Round [43] log likelihood: -135744.021817
EM: Round [44] log likelihood: -135744.014148
EM: Round [45] log likelihood: -135744.006749
EM: Round [46] log likelihood: -135743.999607
EM: Round [47] log likelihood: -135743.992710
EM: Round [48] log likelihood: -135743.986046
EM: Round [49] log likelihood: -135743.979605
EM: Round [50] log likelihood: -135743.973377
EM: Round [51] log likelihood: -135743.967354
EM: Round [52] log likelihood: -135743.961526
EM: Round [53] log likelihood: -135743.955886
EM: Round [54] log likelihood: -135743.950426
EM: Round [55] log likelihood: -135743.945139
EM: Round [56] log likelihood: -135743.940018
EM: Round [57] log likelihood: -135743.935056
EM: Round [58] log likelihood: -135743.930248
EM: Round [59] log likelihood: -135743.925589
EM: Round [60] log likelihood: -135743.921071
EM: Round [61] log likelihood: -135743.916691
EM: Round [62] log likelihood: -135743.912443
EM: Round [63] log likelihood: -135743.908323
EM: Round [64] log likelihood: -135743.904325
EM: Round [65] log likelihood: -135743.900446
EM: Round [66] log likelihood: -135743.896682
EM: Round [67] log likelihood: -135743.893028
EM: Round [68] log likelihood: -135743.889480
EM: Round [69] log likelihood: -135743.886036
EM: Round [70] log likelihood: -135743.882691
EM: Round [71] log likelihood: -135743.879443
EM: Round [72] log likelihood: -135743.876287
EM: Round [73] log likelihood: -135743.873222
EM: Round [74] log likelihood: -135743.870243
EM: Round [75] log likelihood: -135743.867349
EM: Round [76] log likelihood: -135743.864536
EM: Round [77] log likelihood: -135743.861801
EM: Round [78] log likelihood: -135743.859143
EM: Round [79] log likelihood: -135743.856559
EM: Round [80] log likelihood: -135743.854046
EM: Round [81] log likelihood: -135743.851602
EM: Round [82] log likelihood: -135743.849225
EM: Round [83] log likelihood: -135743.846913
EM: Round [84] log likelihood: -135743.844664
EM: Round [85] log likelihood: -135743.842476
EM: Round [86] log likelihood: -135743.840346
EM: Round [87] log likelihood: -135743.838274
EM: Round [88] log likelihood: -135743.836258
EM: Round [89] log likelihood: -135743.834295
EM: Round [90] log likelihood: -135743.832384
EM: Round [91] log likelihood: -135743.830524
EM: Round [92] log likelihood: -135743.828713
EM: Round [93] log likelihood: -135743.826950
EM: Round [94] log likelihood: -135743.825232
EM: Round [95] log likelihood: -135743.823560
EM: Round [96] log likelihood: -135743.821930
EM: Round [97] log likelihood: -135743.820343
EM: Round [98] log likelihood: -135743.818797
EM: Round [99] log likelihood: -135743.817291
EM: Round [100] log likelihood: -135743.815823
EM: Round [101] log likelihood: -135743.814392
EM: Round [102] log likelihood: -135743.812998
EM: Round [103] log likelihood: -135743.811639
EM: Round [104] log likelihood: -135743.810315
EM: Round [105] log likelihood: -135743.809023
EM: Round [106] log likelihood: -135743.807765
EM: Round [107] log likelihood: -135743.806537
EM: Round [108] log likelihood: -135743.805340
EM: Round [109] log likelihood: -135743.804173
EM: Round [110] log likelihood: -135743.803034
EM: Round [111] log likelihood: -135743.801924
EM: Round [112] log likelihood: -135743.800840
EM: Round [113] log likelihood: -135743.799784
EM: Round [114] log likelihood: -135743.798753
EM: Round [115] log likelihood: -135743.797747
EM: Round [116] log likelihood: -135743.796765
EM: Round [117] log likelihood: -135743.795807
EM: Round [118] log likelihood: -135743.794872
EM: Round [119] log likelihood: -135743.793959
EM: Round [120] log likelihood: -135743.793068
EM: Round [121] log likelihood: -135743.792198
EM: Round [122] log likelihood: -135743.791349
EM: Round [123] log likelihood: -135743.790520
EM: Round [124] log likelihood: -135743.789711
EM: Round [125] log likelihood: -135743.788920
EM: Round [126] log likelihood: -135743.788148
EM: Round [127] log likelihood: -135743.787394
EM: Round [128] log likelihood: -135743.786657
EM: Round [129] log likelihood: -135743.785937
EM: Round [130] log likelihood: -135743.785234
EM: Round [131] log likelihood: -135743.784547
EM: Round [132] log likelihood: -135743.783876
EM: Round [133] log likelihood: -135743.783220
EM: Round [134] log likelihood: -135743.782579
EM: Round [135] log likelihood: -135743.781953
EM: Round [136] log likelihood: -135743.781340
EM: Round [137] log likelihood: -135743.780742
EM: Round [138] log likelihood: -135743.780156
EM: Round [139] log likelihood: -135743.779584
EM: Round [140] log likelihood: -135743.779025
EM: Round [141] log likelihood: -135743.778478
EM: Round [142] log likelihood: -135743.777943
EM: Round [143] log likelihood: -135743.777420
EM: Round [144] log likelihood: -135743.776908
EM: Round [145] log likelihood: -135743.776408
EM: Round [146] log likelihood: -135743.775919
EM: Round [147] log likelihood: -135743.775440
EM: Round [148] log likelihood: -135743.774971
EM: Round [149] log likelihood: -135743.774513
EM: Round [150] log likelihood: -135743.774064
EM: Round [151] log likelihood: -135743.773625
EM: Round [152] log likelihood: -135743.773196
EM: Round [153] log likelihood: -135743.772776
EM: Round [154] log likelihood: -135743.772364
EM: Round [155] log likelihood: -135743.771961
EM: Round [156] log likelihood: -135743.771567
EM: Round [157] log likelihood: -135743.771181
EM: Round [158] log likelihood: -135743.770803
EM: Round [159] log likelihood: -135743.770433
EM: Round [160] log likelihood: -135743.770071
EM: Round [161] log likelihood: -135743.769716
EM: Round [162] log likelihood: -135743.769369
EM: Round [163] log likelihood: -135743.769029
EM: Round [164] log likelihood: -135743.768695
EM: Round [165] log likelihood: -135743.768369
EM: Round [166] log likelihood: -135743.768049
EM: Round [167] log likelihood: -135743.767736
EM: Round [168] log likelihood: -135743.767429
EM: Round [169] log likelihood: -135743.767128
EM: Round [170] log likelihood: -135743.766833
EM: Round [171] log likelihood: -135743.766544
EM: Round [172] log likelihood: -135743.766261
EM: Round [173] log likelihood: -135743.765984
EM: Round [174] log likelihood: -135743.765712
EM: Round [175] log likelihood: -135743.765445
EM: Round [176] log likelihood: -135743.765184
EM: Round [177] log likelihood: -135743.764928
EM: Round [178] log likelihood: -135743.764677
EM: Round [179] log likelihood: -135743.764431
EM: Round [180] log likelihood: -135743.764189
EM: Round [181] log likelihood: -135743.763953
EM: Round [182] log likelihood: -135743.763721
EM: Round [183] log likelihood: -135743.763493
EM: Round [184] log likelihood: -135743.763270
EM: Round [185] log likelihood: -135743.763051
EM: Round [186] log likelihood: -135743.762836
EM: Round [187] log likelihood: -135743.762625
EM: Round [188] log likelihood: -135743.762419
EM: Round [189] log likelihood: -135743.762216
EM: Round [190] log likelihood: -135743.762017
EM: Round [191] log likelihood: -135743.761822
EM: Round [192] log likelihood: -135743.761630
EM: Round [193] log likelihood: -135743.761442
EM: Round [194] log likelihood: -135743.761258
EM: Round [195] log likelihood: -135743.761077
EM: Round [196] log likelihood: -135743.760899
EM: Round [197] log likelihood: -135743.760725
EM: Round [198] log likelihood: -135743.760554
EM: Round [199] log likelihood: -135743.760386
EM: Round [200] log likelihood: -135743.760221
EM: Round [201] log likelihood: -135743.760059
EM: Round [202] log likelihood: -135743.759900
EM: Round [203] log likelihood: -135743.759744
EM: Round [204] log likelihood: -135743.759591
EM: Round [205] log likelihood: -135743.759440
EM: Round [206] log likelihood: -135743.759292
EM: Round [207] log likelihood: -135743.759147
EM: Round [208] log likelihood: -135743.759005
EM: Round [209] log likelihood: -135743.758865
EM: Round [210] log likelihood: -135743.758727
EM: Round [211] log likelihood: -135743.758592
EM: Round [212] log likelihood: -135743.758460
EM: Round [213] log likelihood: -135743.758330
EM: Round [214] log likelihood: -135743.758202
EM: Round [215] log likelihood: -135743.758076
EM: Round [216] log likelihood: -135743.757952
EM: Round [217] log likelihood: -135743.757831
EM: Round [218] log likelihood: -135743.757712
EM: Round [219] log likelihood: -135743.757595
EM: Round [220] log likelihood: -135743.757480
EM: Round [221] log likelihood: -135743.757366
EM: Round [222] log likelihood: -135743.757255
EM: Round [223] log likelihood: -135743.757146
EM: Round [224] log likelihood: -135743.757039
EM: Round [225] log likelihood: -135743.756933
EM: Round [226] log likelihood: -135743.756829
EM: Round [227] log likelihood: -135743.756727
EM: Round [228] log likelihood: -135743.756627
EM: Round [229] log likelihood: -135743.756529
EM: Stopping iterations at round 229 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 168642470 > /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir > /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir --annotate /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir
-done, see /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1514, filtered: 8718)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.RFLIPaAyzm/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.RFLIPaAyzm/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000215478.8]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259098.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000286103.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000287460.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000225255.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000228566.2]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000256658.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000127957.18]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000238124.1]
WARNING, no entry stored in dbm for [ENSG00000164385.9]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000229727.7]
WARNING, no entry stored in dbm for [ENSG00000271443.1]
WARNING, no entry stored in dbm for [ENSG00000280187.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000236397.3]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000230710.2]
WARNING, no entry stored in dbm for [ENSG00000280061.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000272009.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000235583.2]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000269293.3]
WARNING, no entry stored in dbm for [ENSG00000229956.11]
WARNING, no entry stored in dbm for [ENSG00000225264.3]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000231952.3]
WARNING, no entry stored in dbm for [ENSG00000227906.8]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000226091.7]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000286933.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000230859.1]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000224209.8]
WARNING, no entry stored in dbm for [ENSG00000267083.1]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000287352.1]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000227121.2]
WARNING, no entry stored in dbm for [ENSG00000285961.1]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000204362.6]
WARNING, no entry stored in dbm for [ENSG00000235137.2]
WARNING, no entry stored in dbm for [ENSG00000235137.2]
WARNING, no entry stored in dbm for [ENSG00000203307.2]
WARNING, no entry stored in dbm for [ENSG00000251536.2]
WARNING, no entry stored in dbm for [ENSG00000238755.3]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000244329.1]
WARNING, no entry stored in dbm for [ENSG00000232546.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000241749.4]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000255325.2]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000258285.1]
WARNING, no entry stored in dbm for [ENSG00000271856.1]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000270890.1]
WARNING, no entry stored in dbm for [ENSG00000232598.2]
WARNING, no entry stored in dbm for [ENSG00000218475.2]
WARNING, no entry stored in dbm for [ENSG00000213234.4]
WARNING, no entry stored in dbm for [ENSG00000240959.1]
WARNING, no entry stored in dbm for [ENSG00000229036.7]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000163016.10]
WARNING, no entry stored in dbm for [ENSG00000241015.2]
WARNING, no entry stored in dbm for [ENSG00000282164.3]
WARNING, no entry stored in dbm for [ENSG00000244128.7]
WARNING, no entry stored in dbm for [ENSG00000213440.2]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000233896.2]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000286953.1]
WARNING, no entry stored in dbm for [ENSG00000127589.4]
WARNING, no entry stored in dbm for [ENSG00000288536.1]
WARNING, no entry stored in dbm for [ENSG00000257771.6]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000231304.2]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000247950.7]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000183298.5]
WARNING, no entry stored in dbm for [ENSG00000226765.1]
WARNING, no entry stored in dbm for [ENSG00000272449.2]
WARNING, no entry stored in dbm for [ENSG00000225381.2]
WARNING, no entry stored in dbm for [ENSG00000213791.4]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000229235.1]
WARNING, no entry stored in dbm for [ENSG00000244708.1]
WARNING, no entry stored in dbm for [ENSG00000232379.1]
WARNING, no entry stored in dbm for [ENSG00000242941.1]
WARNING, no entry stored in dbm for [ENSG00000224839.1]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000200728.1]
WARNING, no entry stored in dbm for [ENSG00000207169.1]
WARNING, no entry stored in dbm for [ENSG00000199308.1]
WARNING, no entry stored in dbm for [ENSG00000229196.4]
WARNING, no entry stored in dbm for [ENSG00000253001.1]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000276487.2]
WARNING, no entry stored in dbm for [ENSG00000283123.1]
WARNING, no entry stored in dbm for [ENSG00000166770.11]
WARNING, no entry stored in dbm for [ENSG00000232949.2]
WARNING, no entry stored in dbm for [ENSG00000229023.1]
WARNING, no entry stored in dbm for [ENSG00000259632.2]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000281128.2]
WARNING, no entry stored in dbm for [ENSG00000231165.3]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000248990.1]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000232546.1]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000225622.1]
WARNING, no entry stored in dbm for [ENSG00000127957.18]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000231826.6]
WARNING, no entry stored in dbm for [ENSG00000186369.10]
WARNING, no entry stored in dbm for [ENSG00000237438.7]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000253154.2]
WARNING, no entry stored in dbm for [ENSG00000224647.2]
WARNING, no entry stored in dbm for [ENSG00000286027.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000223764.2]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000230457.3]
WARNING, no entry stored in dbm for [ENSG00000227070.1]
WARNING, no entry stored in dbm for [ENSG00000276531.1]
WARNING, no entry stored in dbm for [ENSG00000220721.2]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000201966.1]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000257476.1]
WARNING, no entry stored in dbm for [ENSG00000257476.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000286259.1]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000226320.6]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000287225.1]
WARNING, no entry stored in dbm for [ENSG00000286592.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000286170.1]
WARNING, no entry stored in dbm for [ENSG00000234801.3]
WARNING, no entry stored in dbm for [ENSG00000206803.1]
WARNING, no entry stored in dbm for [ENSG00000201270.1]
WARNING, no entry stored in dbm for [ENSG00000251842.1]
WARNING, no entry stored in dbm for [ENSG00000201852.1]
WARNING, no entry stored in dbm for [ENSG00000201294.1]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000272142.4]
WARNING, no entry stored in dbm for [ENSG00000276992.1]
WARNING, no entry stored in dbm for [ENSG00000255519.1]
WARNING, no entry stored in dbm for [ENSG00000259125.1]
WARNING, no entry stored in dbm for [ENSG00000255008.3]
WARNING, no entry stored in dbm for [ENSG00000226453.2]
WARNING, no entry stored in dbm for [ENSG00000231437.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000253877.6]
WARNING, no entry stored in dbm for [ENSG00000267779.7]
WARNING, no entry stored in dbm for [ENSG00000221949.6]
WARNING, no entry stored in dbm for [ENSG00000224167.2]
WARNING, no entry stored in dbm for [ENSG00000236963.7]
WARNING, no entry stored in dbm for [ENSG00000267586.7]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000225511.7]
WARNING, no entry stored in dbm for [ENSG00000223768.2]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000235448.3]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000227404.1]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000244151.1]
WARNING, no entry stored in dbm for [ENSG00000279778.1]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000226172.2]
WARNING, no entry stored in dbm for [ENSG00000224277.5]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000241120.1]
WARNING, no entry stored in dbm for [ENSG00000206149.10]
WARNING, no entry stored in dbm for [ENSG00000281207.1]
WARNING, no entry stored in dbm for [ENSG00000206149.10]
WARNING, no entry stored in dbm for [ENSG00000237390.1]
WARNING, no entry stored in dbm for [ENSG00000245849.8]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000130600.19]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000238105.7]
WARNING, no entry stored in dbm for [ENSG00000260290.2]
WARNING, no entry stored in dbm for [ENSG00000214145.7]
WARNING, no entry stored in dbm for [ENSG00000225446.3]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000216360.1]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000258960.1]
WARNING, no entry stored in dbm for [ENSG00000227288.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000288056.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000178162.8]
WARNING, no entry stored in dbm for [ENSG00000261455.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000234537.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000259245.2]
WARNING, no entry stored in dbm for [ENSG00000199672.1]
WARNING, no entry stored in dbm for [ENSG00000263883.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000279141.3]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000231099.1]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000230710.2]
WARNING, no entry stored in dbm for [ENSG00000230710.2]
WARNING, no entry stored in dbm for [ENSG00000232973.13]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000253771.6]
WARNING, no entry stored in dbm for [ENSG00000229385.2]
WARNING, no entry stored in dbm for [ENSG00000196810.5]
WARNING, no entry stored in dbm for [ENSG00000280927.1]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000198590.12]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000286981.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000255856.2]
WARNING, no entry stored in dbm for [ENSG00000287761.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000234456.8]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000198711.5]
WARNING, no entry stored in dbm for [ENSG00000261376.1]
WARNING, no entry stored in dbm for [ENSG00000196810.5]
WARNING, no entry stored in dbm for [ENSG00000280850.1]
WARNING, no entry stored in dbm for [ENSG00000253549.6]
WARNING, no entry stored in dbm for [ENSG00000242396.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000233642.1]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000206028.1]
WARNING, no entry stored in dbm for [ENSG00000231367.6]
WARNING, no entry stored in dbm for [ENSG00000287736.1]
WARNING, no entry stored in dbm for [ENSG00000264313.2]
WARNING, no entry stored in dbm for [ENSG00000258837.1]
WARNING, no entry stored in dbm for [ENSG00000243069.8]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000279561.2]
WARNING, no entry stored in dbm for [ENSG00000234997.2]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000228427.3]
WARNING, no entry stored in dbm for [ENSG00000229629.1]
WARNING, no entry stored in dbm for [ENSG00000226900.2]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000248503.2]
WARNING, no entry stored in dbm for [ENSG00000286424.1]
WARNING, no entry stored in dbm for [ENSG00000286424.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000277425.1]
WARNING, no entry stored in dbm for [ENSG00000224271.7]
WARNING, no entry stored in dbm for [ENSG00000224271.7]
WARNING, no entry stored in dbm for [ENSG00000286787.1]
WARNING, no entry stored in dbm for [ENSG00000286787.1]
WARNING, no entry stored in dbm for [ENSG00000262049.1]
WARNING, no entry stored in dbm for [ENSG00000183239.5]
WARNING, no entry stored in dbm for [ENSG00000243730.2]
WARNING, no entry stored in dbm for [ENSG00000220110.1]
WARNING, no entry stored in dbm for [ENSG00000244021.4]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000284747.1]
WARNING, no entry stored in dbm for [ENSG00000237015.1]
WARNING, no entry stored in dbm for [ENSG00000286652.1]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000256682.2]
WARNING, no entry stored in dbm for [ENSG00000229425.3]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000237527.1]
WARNING, no entry stored in dbm for [ENSG00000203262.3]
WARNING, no entry stored in dbm for [ENSG00000271676.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000285886.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000261298.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000233654.2]
WARNING, no entry stored in dbm for [ENSG00000243071.1]
WARNING, no entry stored in dbm for [ENSG00000260293.2]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000273328.5]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000251177.2]
WARNING, no entry stored in dbm for [ENSG00000242474.3]
WARNING, no entry stored in dbm for [ENSG00000249022.2]
WARNING, no entry stored in dbm for [ENSG00000267764.1]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000287860.1]
WARNING, no entry stored in dbm for [ENSG00000178636.8]
WARNING, no entry stored in dbm for [ENSG00000213393.5]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000240571.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000228655.7]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000284663.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000259543.1]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000287469.1]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000287677.2]
WARNING, no entry stored in dbm for [ENSG00000255910.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000287306.1]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000226552.2]
WARNING, no entry stored in dbm for [ENSG00000285587.1]
WARNING, no entry stored in dbm for [ENSG00000186076.5]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000272180.1]
WARNING, no entry stored in dbm for [ENSG00000275547.1]
WARNING, no entry stored in dbm for [ENSG00000283695.1]
WARNING, no entry stored in dbm for [ENSG00000235726.7]
WARNING, no entry stored in dbm for [ENSG00000287352.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000236975.2]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000279991.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000250928.1]
WARNING, no entry stored in dbm for [ENSG00000273569.1]
WARNING, no entry stored in dbm for [ENSG00000259106.1]
WARNING, no entry stored in dbm for [ENSG00000287123.1]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000283214.1]
WARNING, no entry stored in dbm for [ENSG00000268650.3]
WARNING, no entry stored in dbm for [ENSG00000258603.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000267122.1]
WARNING, no entry stored in dbm for [ENSG00000263366.2]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
* STAR-Fusion complete. See output: /tmp/nxf.RFLIPaAyzm/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)