-ctat genome lib [/tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.FIHry4Xgdl/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary
-sample contains 15304622 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir -J /tmp/nxf.FIHry4Xgdl/PX_FFPE_kid_TRNA_nat_03_A23MVY2LT4_1.Chimeric.out.junction -O /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.FIHry4Xgdl/PX_FFPE_kid_TRNA_nat_03_A23MVY2LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=66666.67/min
[20000], rate=44444.44/min
[30000], rate=43902.44/min
[40000], rate=45283.02/min
[50000], rate=46153.85/min
[60000], rate=50000.00/min
[70000], rate=51851.85/min
[80000], rate=54545.45/min
[90000], rate=58064.52/min
[100000], rate=61224.49/min
[110000], rate=64077.67/min
[120000], rate=66666.67/min
[130000], rate=70270.27/min
[140000], rate=72413.79/min
[150000], rate=73770.49/min
[160000], rate=75000.00/min
[170000], rate=75000.00/min
[180000], rate=73972.60/min
[190000], rate=70807.45/min
[200000], rate=68965.52/min
[210000], rate=68852.46/min
[220000], rate=68041.24/min
[230000], rate=67317.07/min -building interval tree based on /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=60000.00/min
[20000], rate=54545.45/min
[30000], rate=60000.00/min
[40000], rate=63157.89/min
[50000], rate=60000.00/min
[60000], rate=56250.00/min
[70000], rate=54545.45/min
[80000], rate=53932.58/min
[90000], rate=55670.10/min
[100000], rate=55555.56/min
[110000], rate=55462.18/min
[120000], rate=55384.62/min
[130000], rate=56115.11/min
[140000], rate=57931.03/min
[150000], rate=58064.52/min
[160000], rate=58536.59/min
[170000], rate=60714.29/min
[180000], rate=60674.16/min
[190000], rate=60962.57/min
[200000], rate=61855.67/min
[210000], rate=62686.57/min
[220000], rate=62559.24/min
[230000], rate=63594.47/min -building interval tree based on /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=66666.67/min
[20000], rate=70588.24/min
[30000], rate=66666.67/min
[40000], rate=60000.00/min
[50000], rate=58823.53/min
[60000], rate=53731.34/min
[70000], rate=54545.45/min
[80000], rate=52747.25/min
[90000], rate=51428.57/min
[100000], rate=50847.46/min
[110000], rate=50769.23/min
[120000], rate=51798.56/min
[130000], rate=53061.22/min
[140000], rate=51533.74/min
[150000], rate=51428.57/min
[160000], rate=51336.90/min
[170000], rate=51515.15/min
[180000], rate=52173.91/min
[190000], rate=52534.56/min
[200000], rate=51724.14/min
[210000], rate=51428.57/min
[220000], rate=51562.50/min
[230000], rate=52272.73/min -building interval tree based on /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=150000.00/min
[20000], rate=150000.00/min
[30000], rate=150000.00/min
[40000], rate=150000.00/min
[50000], rate=150000.00/min
[60000], rate=144000.00/min
[70000], rate=110526.32/min
[80000], rate=76190.48/min
[90000], rate=65853.66/min
[100000], rate=60606.06/min
[110000], rate=58407.08/min
[120000], rate=55384.62/min
[130000], rate=54545.45/min
[140000], rate=54545.45/min
[150000], rate=53571.43/min
[160000], rate=53932.58/min
[170000], rate=52849.74/min
[180000], rate=51923.08/min
[190000], rate=51583.71/min
[200000], rate=51948.05/min
[210000], rate=52500.00/min
[220000], rate=51764.71/min
[230000], rate=51301.12/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir --filt_file /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
4000000.00 reads per min processed...
3600000.00 reads per min processed...
3428571.43 reads per min processed...
3750000.00 reads per min processed...
3600000.00 reads per min processed...
3500000.00 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.FIHry4Xgdl/PX_FFPE_kid_TRNA_nat_03_A23MVY2LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -24198.281060
EM: Round [1] log likelihood: -24174.668109
EM: Round [2] log likelihood: -24163.242361
EM: Round [3] log likelihood: -24157.001699
EM: Round [4] log likelihood: -24153.537052
EM: Round [5] log likelihood: -24151.612872
EM: Round [6] log likelihood: -24150.533418
EM: Round [7] log likelihood: -24149.914357
EM: Round [8] log likelihood: -24149.547878
EM: Round [9] log likelihood: -24149.322439
EM: Round [10] log likelihood: -24149.177839
EM: Round [11] log likelihood: -24149.081085
EM: Round [12] log likelihood: -24149.013683
EM: Round [13] log likelihood: -24148.964978
EM: Round [14] log likelihood: -24148.928637
EM: Round [15] log likelihood: -24148.900768
EM: Round [16] log likelihood: -24148.878896
EM: Round [17] log likelihood: -24148.861394
EM: Round [18] log likelihood: -24148.847157
EM: Round [19] log likelihood: -24148.835415
EM: Round [20] log likelihood: -24148.825613
EM: Round [21] log likelihood: -24148.817345
EM: Round [22] log likelihood: -24148.810305
EM: Round [23] log likelihood: -24148.804262
EM: Round [24] log likelihood: -24148.799035
EM: Round [25] log likelihood: -24148.794482
EM: Round [26] log likelihood: -24148.790491
EM: Round [27] log likelihood: -24148.786972
EM: Round [28] log likelihood: -24148.783852
EM: Round [29] log likelihood: -24148.781070
EM: Round [30] log likelihood: -24148.778577
EM: Round [31] log likelihood: -24148.776333
EM: Round [32] log likelihood: -24148.774304
EM: Round [33] log likelihood: -24148.772461
EM: Round [34] log likelihood: -24148.770781
EM: Round [35] log likelihood: -24148.769242
EM: Round [36] log likelihood: -24148.767829
EM: Round [37] log likelihood: -24148.766526
EM: Round [38] log likelihood: -24148.765321
EM: Round [39] log likelihood: -24148.764203
EM: Round [40] log likelihood: -24148.763163
EM: Round [41] log likelihood: -24148.762194
EM: Round [42] log likelihood: -24148.761287
EM: Round [43] log likelihood: -24148.760438
EM: Round [44] log likelihood: -24148.759640
EM: Round [45] log likelihood: -24148.758890
EM: Round [46] log likelihood: -24148.758183
EM: Round [47] log likelihood: -24148.757516
EM: Round [48] log likelihood: -24148.756886
EM: Round [49] log likelihood: -24148.756289
EM: Round [50] log likelihood: -24148.755724
EM: Round [51] log likelihood: -24148.755188
EM: Round [52] log likelihood: -24148.754679
EM: Round [53] log likelihood: -24148.754195
EM: Round [54] log likelihood: -24148.753735
EM: Round [55] log likelihood: -24148.753297
EM: Round [56] log likelihood: -24148.752880
EM: Round [57] log likelihood: -24148.752482
EM: Round [58] log likelihood: -24148.752103
EM: Round [59] log likelihood: -24148.751742
EM: Round [60] log likelihood: -24148.751396
EM: Round [61] log likelihood: -24148.751067
EM: Round [62] log likelihood: -24148.750752
EM: Round [63] log likelihood: -24148.750451
EM: Round [64] log likelihood: -24148.750163
EM: Round [65] log likelihood: -24148.749888
EM: Round [66] log likelihood: -24148.749624
EM: Round [67] log likelihood: -24148.749373
EM: Round [68] log likelihood: -24148.749131
EM: Round [69] log likelihood: -24148.748901
EM: Round [70] log likelihood: -24148.748680
EM: Round [71] log likelihood: -24148.748468
EM: Round [72] log likelihood: -24148.748266
EM: Round [73] log likelihood: -24148.748071
EM: Round [74] log likelihood: -24148.747885
EM: Round [75] log likelihood: -24148.747707
EM: Round [76] log likelihood: -24148.747536
EM: Round [77] log likelihood: -24148.747372
EM: Round [78] log likelihood: -24148.747215
EM: Round [79] log likelihood: -24148.747064
EM: Round [80] log likelihood: -24148.746920
EM: Round [81] log likelihood: -24148.746781
EM: Round [82] log likelihood: -24148.746648
EM: Round [83] log likelihood: -24148.746521
EM: Round [84] log likelihood: -24148.746398
EM: Round [85] log likelihood: -24148.746281
EM: Round [86] log likelihood: -24148.746168
EM: Round [87] log likelihood: -24148.746060
EM: Round [88] log likelihood: -24148.745956
EM: Round [89] log likelihood: -24148.745856
EM: Stopping iterations at round 89 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -24185.823440
EM: Round [1] log likelihood: -24163.144359
EM: Round [2] log likelihood: -24152.542296
EM: Round [3] log likelihood: -24146.929632
EM: Round [4] log likelihood: -24143.872177
EM: Round [5] log likelihood: -24142.189938
EM: Round [6] log likelihood: -24141.249887
EM: Round [7] log likelihood: -24140.711240
EM: Round [8] log likelihood: -24140.391991
EM: Round [9] log likelihood: -24140.195071
EM: Round [10] log likelihood: -24140.068292
EM: Round [11] log likelihood: -24139.983120
EM: Round [12] log likelihood: -24139.923581
EM: Round [13] log likelihood: -24139.880466
EM: Round [14] log likelihood: -24139.848289
EM: Round [15] log likelihood: -24139.823664
EM: Round [16] log likelihood: -24139.804428
EM: Round [17] log likelihood: -24139.789146
EM: Round [18] log likelihood: -24139.776837
EM: Round [19] log likelihood: -24139.766811
EM: Round [20] log likelihood: -24139.758568
EM: Round [21] log likelihood: -24139.751736
EM: Round [22] log likelihood: -24139.746037
EM: Round [23] log likelihood: -24139.741256
EM: Round [24] log likelihood: -24139.737225
EM: Round [25] log likelihood: -24139.733813
EM: Round [26] log likelihood: -24139.730913
EM: Round [27] log likelihood: -24139.728441
EM: Round [28] log likelihood: -24139.726327
EM: Round [29] log likelihood: -24139.724514
EM: Round [30] log likelihood: -24139.722956
EM: Round [31] log likelihood: -24139.721614
EM: Round [32] log likelihood: -24139.720455
EM: Round [33] log likelihood: -24139.719453
EM: Round [34] log likelihood: -24139.718585
EM: Round [35] log likelihood: -24139.717831
EM: Round [36] log likelihood: -24139.717175
EM: Round [37] log likelihood: -24139.716604
EM: Round [38] log likelihood: -24139.716105
EM: Round [39] log likelihood: -24139.715670
EM: Round [40] log likelihood: -24139.715289
EM: Round [41] log likelihood: -24139.714955
EM: Round [42] log likelihood: -24139.714662
EM: Round [43] log likelihood: -24139.714404
EM: Round [44] log likelihood: -24139.714177
EM: Round [45] log likelihood: -24139.713978
EM: Round [46] log likelihood: -24139.713801
EM: Round [47] log likelihood: -24139.713645
EM: Round [48] log likelihood: -24139.713507
EM: Round [49] log likelihood: -24139.713385
EM: Round [50] log likelihood: -24139.713276
EM: Round [51] log likelihood: -24139.713180
EM: Stopping iterations at round 51 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 15304622 > /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir > /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir --annotate /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir
-done, see /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 298, filtered: 2741)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.FIHry4Xgdl/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.FIHry4Xgdl/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
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WARNING, no entry stored in dbm for [ENSG00000225594.1]
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WARNING, no entry stored in dbm for [ENSG00000231166.2]
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WARNING, no entry stored in dbm for [ENSG00000263327.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000228140.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000266433.6]
WARNING, no entry stored in dbm for [ENSG00000187621.15]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [IGL-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000251278.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000222826.1]
WARNING, no entry stored in dbm for [ENSG00000239218.2]
WARNING, no entry stored in dbm for [ENSG00000287618.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000222386.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000200131.1]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000201010.1]
WARNING, no entry stored in dbm for [ENSG00000276672.1]
WARNING, no entry stored in dbm for [ENSG00000251562.8]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000232748.3]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000229835.2]
WARNING, no entry stored in dbm for [ENSG00000265279.1]
WARNING, no entry stored in dbm for [ENSG00000274922.1]
WARNING, no entry stored in dbm for [ENSG00000256139.2]
WARNING, no entry stored in dbm for [ENSG00000228347.1]
WARNING, no entry stored in dbm for [ENSG00000257038.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000265091.5]
WARNING, no entry stored in dbm for [ENSG00000220472.1]
WARNING, no entry stored in dbm for [ENSG00000280767.3]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000226149.6]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000282924.1]
WARNING, no entry stored in dbm for [ENSG00000282924.1]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000230027.2]
WARNING, no entry stored in dbm for [ENSG00000205976.4]
WARNING, no entry stored in dbm for [ENSG00000279259.1]
WARNING, no entry stored in dbm for [ENSG00000249604.1]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000263843.1]
WARNING, no entry stored in dbm for [ENSG00000263272.1]
WARNING, no entry stored in dbm for [ENSG00000276871.1]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
WARNING, no entry stored in dbm for [ENSG00000275877.1]
WARNING, no entry stored in dbm for [ENSG00000283274.1]
* STAR-Fusion complete. See output: /tmp/nxf.FIHry4Xgdl/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)