Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/6fd5122e78df23e4731b8583b4a505/659_dm4-T1-TRNA-1_A23MVY2LT4_2_1.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/de0595ff9bdcef080b52097900cc33/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/de0595ff9bdcef080b52097900cc33/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/6fd5122e78df23e4731b8583b4a505/659_dm4-T1-TRNA-1_A23MVY2LT4_2_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/fdbf497f1ce0e709d55eee1aac80b1/659_dm4-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.2ErKiAA3Ab/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary
-sample contains 133389273 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir -J /tmp/nxf.2ErKiAA3Ab/659_dm4-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction -O /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.2ErKiAA3Ab/659_dm4-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
[10000], rate=25000.00/min
[20000], rate=27906.98/min
[30000], rate=28571.43/min
[40000], rate=29629.63/min
[50000], rate=30000.00/min
[60000], rate=30769.23/min
[70000], rate=31578.95/min
[80000], rate=32214.77/min
[90000], rate=30857.14/min
[100000], rate=30303.03/min
[110000], rate=31132.08/min
[120000], rate=32142.86/min
[130000], rate=32773.11/min
[140000], rate=33333.33/min
[150000], rate=34351.15/min
[160000], rate=35164.84/min
[170000], rate=36042.40/min
[180000], rate=36734.69/min
[190000], rate=37623.76/min
[200000], rate=38216.56/min
[210000], rate=38769.23/min
[220000], rate=39402.99/min
[230000], rate=40116.28/min
[240000], rate=40793.20/min
[250000], rate=41322.31/min
[260000], rate=41711.23/min
[270000], rate=42077.92/min
[280000], rate=42639.59/min
[290000], rate=43176.18/min
[300000], rate=43689.32/min
[310000], rate=44391.41/min
[320000], rate=45176.47/min
[330000], rate=46046.51/min
[340000], rate=46788.99/min
[350000], rate=47511.31/min
[360000], rate=48214.29/min
[370000], rate=48898.68/min
[380000], rate=49565.22/min
[390000], rate=50322.58/min
[400000], rate=50955.41/min
[410000], rate=51037.34/min
[420000], rate=50909.09/min
[430000], rate=50988.14/min
[440000], rate=51162.79/min
[450000], rate=51428.57/min
[460000], rate=51685.39/min
[470000], rate=51838.24/min
[480000], rate=52079.57/min
[490000], rate=52127.66/min
[500000], rate=52447.55/min
[510000], rate=52849.74/min
[520000], rate=53333.33/min
[530000], rate=54266.21/min
[540000], rate=55195.91/min
[550000], rate=55932.20/min
[560000], rate=56852.79/min
[570000], rate=57478.99/min
[580000], rate=58096.83/min
[590000], rate=59000.00/min
[600000], rate=60000.00/min
[610000], rate=60898.50/min
[620000], rate=61896.84/min
[630000], rate=62790.70/min
[640000], rate=63787.38/min
[650000], rate=64676.62/min
[660000], rate=65671.64/min
[670000], rate=66556.29/min
[680000], rate=67549.67/min
[690000], rate=68429.75/min
[700000], rate=68627.45/min
[710000], rate=69381.11/min
[720000], rate=70016.21/min
[730000], rate=70873.79/min
[740000], rate=71153.85/min
[750000], rate=72115.38/min
[760000], rate=72960.00/min
[770000], rate=73566.88/min
[780000], rate=74403.82/min
[790000], rate=74763.41/min
[800000], rate=75353.22/min
[810000], rate=76175.55/min
[820000], rate=77115.99/min
[830000], rate=77934.27/min
[840000], rate=78750.00/min
[850000], rate=79687.50/min
[860000], rate=80373.83/min
[870000], rate=80555.56/min
[880000], rate=81105.99/min
[890000], rate=81278.54/min
[900000], rate=81694.40/min
[910000], rate=82477.34/min
[920000], rate=83383.69/min
[930000], rate=84162.90/min
[940000], rate=85067.87/min
[950000], rate=85843.37/min
[960000], rate=86746.99/min
[970000], rate=87518.80/min
[980000], rate=88421.05/min
[990000], rate=89189.19/min
[1000000], rate=90090.09/min
[1010000], rate=90990.99/min
[1020000], rate=91343.28/min
[1030000], rate=91150.44/min
[1040000], rate=91094.89/min
[1050000], rate=91172.21/min
[1060000], rate=91379.31/min
[1070000], rate=91322.90/min
[1080000], rate=91396.33/min
[1090000], rate=91086.35/min
[1100000], rate=91034.48/min
[1110000], rate=90489.13/min
[1120000], rate=89839.57/min
[1130000], rate=89210.53/min
[1140000], rate=88144.33/min
[1150000], rate=87898.09/min
[1160000], rate=87767.97/min
[1170000], rate=87640.45/min
[1180000], rate=87623.76/min
[1190000], rate=87714.99/min
[1200000], rate=88343.56/min
[1210000], rate=88644.69/min
[1220000], rate=88619.85/min
[1230000], rate=88595.44/min
[1240000], rate=88571.43/min
[1250000], rate=88547.82/min
[1260000], rate=88628.37/min
[1270000], rate=88604.65/min
[1280000], rate=88683.60/min
[1290000], rate=86771.30/min
[1300000], rate=84507.04/min
[1310000], rate=82911.39/min
[1320000], rate=81733.75/min
[1330000], rate=80524.72/min
[1340000], rate=79603.96/min
[1350000], rate=78034.68/min
[1360000], rate=76763.88/min
[1370000], rate=75830.26/min
[1380000], rate=75204.36/min
[1390000], rate=74464.29/min
[1400000], rate=73878.63/min
[1410000], rate=73437.50/min
[1420000], rate=73133.05/min
[1430000], rate=72897.20/min
[1440000], rate=72666.11/min
[1450000], rate=72621.04/min
[1460000], rate=72516.56/min
[1470000], rate=72413.79/min
[1480000], rate=72312.70/min
[1490000], rate=72271.62/min
[1500000], rate=72231.14/min
[1510000], rate=72306.46/min
[1520000], rate=72380.95/min
[1530000], rate=72454.62/min
[1540000], rate=72641.51/min
[1550000], rate=72826.94/min
[1560000], rate=72897.20/min
[1570000], rate=72239.26/min -building interval tree based on /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
[10000], rate=54545.45/min
[20000], rate=57142.86/min
[30000], rate=56250.00/min
[40000], rate=55813.95/min
[50000], rate=52631.58/min
[60000], rate=52173.91/min
[70000], rate=52500.00/min
[80000], rate=52747.25/min
[90000], rate=52427.18/min
[100000], rate=50000.00/min
[110000], rate=49624.06/min
[120000], rate=51428.57/min
[130000], rate=52702.70/min
[140000], rate=53846.15/min
[150000], rate=55214.72/min
[160000], rate=57142.86/min
[170000], rate=56983.24/min
[180000], rate=56544.50/min
[190000], rate=56435.64/min
[200000], rate=56338.03/min
[210000], rate=56000.00/min
[220000], rate=56170.21/min
[230000], rate=56097.56/min
[240000], rate=56250.00/min
[250000], rate=56390.98/min
[260000], rate=56727.27/min
[270000], rate=57042.25/min
[280000], rate=57337.88/min
[290000], rate=58000.00/min
[300000], rate=58631.92/min
[310000], rate=59424.92/min
[320000], rate=60000.00/min
[330000], rate=60550.46/min
[340000], rate=61261.26/min
[350000], rate=61946.90/min
[360000], rate=62790.70/min
[370000], rate=63610.32/min
[380000], rate=64406.78/min
[390000], rate=65363.13/min
[400000], rate=65395.10/min
[410000], rate=64736.84/min
[420000], rate=64615.38/min
[430000], rate=64500.00/min
[440000], rate=64233.58/min
[450000], rate=64133.02/min
[460000], rate=63888.89/min
[470000], rate=63656.88/min
[480000], rate=63436.12/min
[490000], rate=63362.07/min
[500000], rate=63157.89/min
[510000], rate=62962.96/min
[520000], rate=62650.60/min
[530000], rate=62230.92/min
[540000], rate=61950.29/min
[550000], rate=61338.29/min
[560000], rate=61090.91/min
[570000], rate=61510.79/min
[580000], rate=61484.10/min
[590000], rate=61565.22/min
[600000], rate=61855.67/min
[610000], rate=62244.90/min
[620000], rate=62731.87/min
[630000], rate=63210.70/min
[640000], rate=62236.63/min
[650000], rate=60747.66/min
[660000], rate=59459.46/min
[670000], rate=58771.93/min
[680000], rate=58036.98/min
[690000], rate=57024.79/min
[700000], rate=56149.73/min
[710000], rate=55978.98/min
[720000], rate=56031.13/min
[730000], rate=55938.70/min
[740000], rate=55919.40/min
[750000], rate=55762.08/min
[760000], rate=55609.76/min
[770000], rate=55595.67/min
[780000], rate=55648.04/min
[790000], rate=55438.60/min
[800000], rate=55299.54/min
[810000], rate=55102.04/min
[820000], rate=55095.18/min
[830000], rate=55271.92/min
[840000], rate=55629.14/min
[850000], rate=55921.05/min
[860000], rate=56086.96/min
[870000], rate=56250.00/min
[880000], rate=56350.05/min
[890000], rate=56507.94/min
[900000], rate=56663.17/min
[910000], rate=56934.31/min
[920000], rate=57202.07/min
[930000], rate=57585.14/min
[940000], rate=57786.89/min
[950000], rate=58103.98/min
[960000], rate=57947.69/min
[970000], rate=57566.77/min
[980000], rate=57142.86/min
[990000], rate=56951.10/min
[1000000], rate=56764.43/min
[1010000], rate=56635.51/min
[1020000], rate=56457.56/min
[1030000], rate=56489.95/min
[1040000], rate=56419.53/min
[1050000], rate=56451.61/min
[1060000], rate=56483.13/min
[1070000], rate=56563.88/min
[1080000], rate=56742.56/min
[1090000], rate=56869.57/min
[1100000], rate=56994.82/min
[1110000], rate=57216.49/min
[1120000], rate=57485.03/min
[1130000], rate=57800.51/min
[1140000], rate=58113.85/min
[1150000], rate=58425.06/min
[1160000], rate=58635.21/min
[1170000], rate=58695.65/min
[1180000], rate=58512.40/min
[1190000], rate=58428.81/min
[1200000], rate=58346.84/min
[1210000], rate=58173.08/min
[1220000], rate=58141.38/min
[1230000], rate=58156.03/min
[1240000], rate=58125.00/min
[1250000], rate=58139.53/min
[1260000], rate=58198.61/min
[1270000], rate=58256.88/min
[1280000], rate=58314.35/min
[1290000], rate=58415.09/min
[1300000], rate=58514.63/min
[1310000], rate=58656.72/min
[1320000], rate=58797.33/min
[1330000], rate=59198.81/min
[1340000], rate=59511.47/min
[1350000], rate=59690.49/min
[1360000], rate=59824.05/min
[1370000], rate=60000.00/min
[1380000], rate=60174.42/min
[1390000], rate=60391.02/min
[1400000], rate=60301.51/min
[1410000], rate=60213.52/min
[1420000], rate=60212.01/min
[1430000], rate=60252.81/min
[1440000], rate=60167.13/min
[1450000], rate=60124.40/min
[1460000], rate=60123.54/min
[1470000], rate=60204.78/min
[1480000], rate=60244.23/min
[1490000], rate=60323.89/min
[1500000], rate=60443.25/min
[1510000], rate=60561.50/min
[1520000], rate=60678.64/min
[1530000], rate=60956.18/min
[1540000], rate=60949.87/min
[1550000], rate=60784.31/min
[1560000], rate=60818.71/min -building interval tree based on /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=60000.00/min
[20000], rate=54545.45/min
[30000], rate=60000.00/min
[40000], rate=61538.46/min
[50000], rate=62500.00/min
[60000], rate=62068.97/min
[70000], rate=60869.57/min
[80000], rate=60000.00/min
[90000], rate=59340.66/min
[100000], rate=57692.31/min
[110000], rate=56410.26/min
[120000], rate=54961.83/min
[130000], rate=55714.29/min
[140000], rate=56375.84/min
[150000], rate=56962.03/min
[160000], rate=57831.33/min
[170000], rate=58959.54/min
[180000], rate=60000.00/min
[190000], rate=60962.57/min
[200000], rate=62176.17/min
[210000], rate=63316.58/min
[220000], rate=64705.88/min
[230000], rate=65714.29/min
[240000], rate=65454.55/min
[250000], rate=65217.39/min
[260000], rate=64730.29/min
[270000], rate=64541.83/min
[280000], rate=64367.82/min
[290000], rate=64206.64/min
[300000], rate=64285.71/min
[310000], rate=64359.86/min
[320000], rate=64646.46/min
[330000], rate=65131.58/min
[340000], rate=65594.86/min
[350000], rate=66246.06/min
[360000], rate=67080.75/min
[370000], rate=67889.91/min
[380000], rate=68468.47/min
[390000], rate=69230.77/min
[400000], rate=68181.82/min
[410000], rate=66847.83/min
[420000], rate=66141.73/min
[430000], rate=66323.91/min
[440000], rate=66498.74/min
[450000], rate=65853.66/min
[460000], rate=65248.23/min
[470000], rate=64976.96/min
[480000], rate=64864.86/min
[490000], rate=64615.38/min
[500000], rate=64516.13/min
[510000], rate=64016.74/min
[520000], rate=63157.89/min
[530000], rate=62352.94/min
[540000], rate=61950.29/min
[550000], rate=61567.16/min
[560000], rate=60980.04/min
[570000], rate=60105.45/min
[580000], rate=60103.63/min
[590000], rate=60204.08/min
[600000], rate=60100.17/min
[610000], rate=60098.52/min
[620000], rate=59807.07/min
[630000], rate=59904.91/min
[640000], rate=59813.08/min
[650000], rate=59451.22/min
[660000], rate=59192.83/min
[670000], rate=59467.46/min
[680000], rate=59562.04/min
[690000], rate=59568.35/min
[700000], rate=59490.08/min
[710000], rate=59248.96/min
[720000], rate=57831.33/min
[730000], rate=57783.64/min
[740000], rate=57737.32/min
[750000], rate=57618.44/min
[760000], rate=57648.55/min
[770000], rate=57822.28/min
[780000], rate=57992.57/min
[790000], rate=58230.96/min
[800000], rate=58465.29/min
[810000], rate=58766.63/min
[820000], rate=58781.36/min
[830000], rate=57241.38/min
[840000], rate=55567.81/min
[850000], rate=54545.45/min
[860000], rate=53750.00/min
[870000], rate=53102.75/min
[880000], rate=52071.01/min
[890000], rate=51149.43/min
[900000], rate=50895.38/min
[910000], rate=50696.38/min
[920000], rate=50595.78/min
[930000], rate=50497.74/min
[940000], rate=50267.38/min
[950000], rate=50131.93/min
[960000], rate=50043.44/min
[970000], rate=49871.47/min
[980000], rate=49872.77/min
[990000], rate=49957.95/min
[1000000], rate=50083.47/min
[1010000], rate=50165.56/min
[1020000], rate=50205.09/min
[1030000], rate=50203.09/min
[1040000], rate=50282.03/min
[1050000], rate=50359.71/min
[1060000], rate=50476.19/min
[1070000], rate=50670.88/min
[1080000], rate=50823.53/min
[1090000], rate=51014.04/min
[1100000], rate=51242.24/min
[1110000], rate=51428.57/min
[1120000], rate=51612.90/min
[1130000], rate=51795.26/min
[1140000], rate=51936.22/min
[1150000], rate=52114.80/min
[1160000], rate=52528.30/min
[1170000], rate=52781.95/min
[1180000], rate=52914.80/min
[1190000], rate=53125.00/min
[1200000], rate=53254.44/min
[1210000], rate=53460.97/min
[1220000], rate=53430.66/min
[1230000], rate=52827.49/min
[1240000], rate=52173.91/min
[1250000], rate=51581.84/min
[1260000], rate=51115.62/min
[1270000], rate=50664.89/min
[1280000], rate=50163.29/min
[1290000], rate=50032.32/min
[1300000], rate=49586.78/min
[1310000], rate=49402.89/min
[1320000], rate=49101.05/min
[1330000], rate=48957.06/min
[1340000], rate=48786.41/min
[1350000], rate=48648.65/min
[1360000], rate=48600.36/min
[1370000], rate=48381.40/min
[1380000], rate=48336.25/min
[1390000], rate=48319.81/min
[1400000], rate=48359.24/min
[1410000], rate=48342.86/min
[1420000], rate=48217.32/min
[1430000], rate=48121.14/min
[1440000], rate=48133.70/min
[1450000], rate=48013.25/min
[1460000], rate=48052.66/min
[1470000], rate=48170.40/min
[1480000], rate=48313.38/min
[1490000], rate=48429.04/min
[1500000], rate=48569.89/min
[1510000], rate=48294.24/min
[1520000], rate=48075.91/min
[1530000], rate=47862.36/min
[1540000], rate=47604.33/min
[1550000], rate=47424.78/min
[1560000], rate=47177.42/min -building interval tree based on /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=120000.00/min
[20000], rate=200000.00/min
[30000], rate=163636.36/min
[40000], rate=150000.00/min
[50000], rate=176470.59/min
[60000], rate=200000.00/min
[70000], rate=233333.33/min
[80000], rate=266666.67/min
[90000], rate=245454.55/min
[100000], rate=240000.00/min
[110000], rate=235714.29/min
[120000], rate=225000.00/min
[130000], rate=222857.14/min
[140000], rate=240000.00/min
[150000], rate=257142.86/min
[160000], rate=266666.67/min
[170000], rate=275675.68/min
[180000], rate=257142.86/min
[190000], rate=253333.33/min
[200000], rate=250000.00/min
[210000], rate=247058.82/min
[220000], rate=240000.00/min
[230000], rate=246428.57/min
[240000], rate=240000.00/min
[250000], rate=238095.24/min
[260000], rate=236363.64/min
[270000], rate=234782.61/min
[280000], rate=230136.99/min
[290000], rate=235135.14/min
[300000], rate=197802.20/min
[310000], rate=130069.93/min
[320000], rate=104347.83/min
[330000], rate=94736.84/min
[340000], rate=85714.29/min
[350000], rate=78651.69/min
[360000], rate=74226.80/min
[370000], rate=70476.19/min
[380000], rate=67256.64/min
[390000], rate=65000.00/min
[400000], rate=63157.89/min
[410000], rate=61194.03/min
[420000], rate=59574.47/min
[430000], rate=58371.04/min
[440000], rate=57142.86/min
[450000], rate=55327.87/min
[460000], rate=52772.47/min
[470000], rate=51743.12/min
[480000], rate=49569.71/min
[490000], rate=48675.50/min
[500000], rate=47770.70/min
[510000], rate=47004.61/min
[520000], rate=46290.80/min
[530000], rate=45689.66/min
[540000], rate=45125.35/min
[550000], rate=44354.84/min
[560000], rate=44094.49/min
[570000], rate=43958.87/min
[580000], rate=43828.72/min
[590000], rate=43757.73/min
[600000], rate=43636.36/min
[610000], rate=43467.93/min
[620000], rate=43407.23/min
[630000], rate=43150.68/min
[640000], rate=43049.33/min
[650000], rate=42998.90/min
[660000], rate=42996.74/min
[670000], rate=42948.72/min
[680000], rate=42902.21/min
[690000], rate=42812.82/min
[700000], rate=43032.79/min
[710000], rate=43292.68/min
[720000], rate=43504.53/min
[730000], rate=43712.57/min
[740000], rate=43916.91/min
[750000], rate=44160.94/min
[760000], rate=43846.15/min
[770000], rate=44126.07/min
[780000], rate=44276.25/min
[790000], rate=44052.04/min
[800000], rate=43636.36/min
[810000], rate=43548.39/min
[820000], rate=43578.39/min
[830000], rate=43722.56/min
[840000], rate=43826.09/min
[850000], rate=44003.45/min
[860000], rate=44140.29/min
[870000], rate=44274.81/min
[880000], rate=44444.44/min
[890000], rate=44611.53/min
[900000], rate=44813.28/min
[910000], rate=45012.37/min
[920000], rate=45208.85/min
[930000], rate=45402.77/min
[940000], rate=45631.07/min
[950000], rate=45819.94/min
[960000], rate=46080.00/min
[970000], rate=46337.58/min
[980000], rate=45723.17/min
[990000], rate=45239.91/min
[1000000], rate=44876.59/min
[1010000], rate=44526.08/min
[1020000], rate=44283.65/min
[1030000], rate=44237.65/min
[1040000], rate=44098.94/min
[1050000], rate=43933.05/min
[1060000], rate=43862.07/min
[1070000], rate=43792.63/min
[1080000], rate=43813.39/min
[1090000], rate=43804.42/min
[1100000], rate=43679.68/min
[1110000], rate=43586.39/min
[1120000], rate=43579.77/min
[1130000], rate=43461.54/min
[1140000], rate=43456.16/min
[1150000], rate=43505.67/min
[1160000], rate=43527.20/min
[1170000], rate=43629.58/min
[1180000], rate=43784.79/min
[1190000], rate=43938.46/min
[1200000], rate=44090.63/min
[1210000], rate=44268.29/min
[1220000], rate=44444.44/min
[1230000], rate=44619.11/min
[1240000], rate=44471.01/min
[1250000], rate=44091.71/min
[1260000], rate=43775.33/min
[1270000], rate=43517.99/min
[1280000], rate=43121.84/min
[1290000], rate=42833.43/min
[1300000], rate=42739.73/min
[1310000], rate=42463.53/min
[1320000], rate=42105.26/min
[1330000], rate=41627.54/min
[1340000], rate=41062.31/min
[1350000], rate=40847.20/min
[1360000], rate=40637.45/min
[1370000], rate=40693.07/min
[1380000], rate=40748.03/min
[1390000], rate=40842.31/min
[1400000], rate=40677.97/min
[1410000], rate=40751.45/min
[1420000], rate=40785.06/min
[1430000], rate=40625.00/min
[1440000], rate=40620.59/min
[1450000], rate=40692.24/min
[1460000], rate=40820.13/min
[1470000], rate=40966.09/min
[1480000], rate=41054.09/min
[1490000], rate=41103.45/min
[1500000], rate=41208.79/min
[1510000], rate=41332.12/min
[1520000], rate=41473.40/min
[1530000], rate=41538.46/min
[1540000], rate=41696.75/min
[1550000], rate=41685.34/min
[1560000], rate=41785.71/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir --filt_file /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
6000000.00 reads per min processed...
9000000.00 reads per min processed...
6000000.00 reads per min processed...
5000000.00 reads per min processed...
4500000.00 reads per min processed...
4666666.67 reads per min processed...
4363636.36 reads per min processed...
4153846.15 reads per min processed...
4285714.29 reads per min processed...
4125000.00 reads per min processed...
4000000.00 reads per min processed...
4105263.16 reads per min processed...
4200000.00 reads per min processed...
4090909.09 reads per min processed...
4000000.00 reads per min processed...
3923076.92 reads per min processed...
4000000.00 reads per min processed...
3931034.48 reads per min processed...
3870967.74 reads per min processed...
3818181.82 reads per min processed...
3771428.57 reads per min processed...
3833333.33 reads per min processed...
3789473.68 reads per min processed...
3846153.85 reads per min processed...
3804878.05 reads per min processed...
3767441.86 reads per min processed...
3733333.33 reads per min processed...
3782608.70 reads per min processed...
3750000.00 reads per min processed...
3875000.00 reads per min processed...
3918367.35 reads per min processed...
4040816.33 reads per min processed...
4080000.00 reads per min processed...
4117647.06 reads per min processed...
4153846.15 reads per min processed...
4111111.11 reads per min processed...
4071428.57 reads per min processed...
4105263.16 reads per min processed...
4067796.61 reads per min processed...
4100000.00 reads per min processed...
4064516.13 reads per min processed...
4095238.10 reads per min processed...
4061538.46 reads per min processed...
4029850.75 reads per min processed...
4000000.00 reads per min processed...
3971830.99 reads per min processed...
3945205.48 reads per min processed...
3972972.97 reads per min processed...
3947368.42 reads per min processed...
3974025.97 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.2ErKiAA3Ab/659_dm4-T1-TRNA-1_A23MVY2LT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -125167.640409
EM: Round [1] log likelihood: -125109.980174
EM: Round [2] log likelihood: -125087.939912
EM: Round [3] log likelihood: -125077.143230
EM: Round [4] log likelihood: -125071.364292
EM: Round [5] log likelihood: -125068.137370
EM: Round [6] log likelihood: -125066.271863
EM: Round [7] log likelihood: -125065.151964
EM: Round [8] log likelihood: -125064.451369
EM: Round [9] log likelihood: -125063.994353
EM: Round [10] log likelihood: -125063.684160
EM: Round [11] log likelihood: -125063.465919
EM: Round [12] log likelihood: -125063.307417
EM: Round [13] log likelihood: -125063.189051
EM: Round [14] log likelihood: -125063.098459
EM: Round [15] log likelihood: -125063.027581
EM: Round [16] log likelihood: -125062.971008
EM: Round [17] log likelihood: -125062.925014
EM: Round [18] log likelihood: -125062.886971
EM: Round [19] log likelihood: -125062.854998
EM: Round [20] log likelihood: -125062.827718
EM: Round [21] log likelihood: -125062.804117
EM: Round [22] log likelihood: -125062.783434
EM: Round [23] log likelihood: -125062.765093
EM: Round [24] log likelihood: -125062.748655
EM: Round [25] log likelihood: -125062.733781
EM: Round [26] log likelihood: -125062.720208
EM: Round [27] log likelihood: -125062.707727
EM: Round [28] log likelihood: -125062.696176
EM: Round [29] log likelihood: -125062.685424
EM: Round [30] log likelihood: -125062.675366
EM: Round [31] log likelihood: -125062.665916
EM: Round [32] log likelihood: -125062.657005
EM: Round [33] log likelihood: -125062.648575
EM: Round [34] log likelihood: -125062.640577
EM: Round [35] log likelihood: -125062.632973
EM: Round [36] log likelihood: -125062.625727
EM: Round [37] log likelihood: -125062.618811
EM: Round [38] log likelihood: -125062.612198
EM: Round [39] log likelihood: -125062.605868
EM: Round [40] log likelihood: -125062.599801
EM: Round [41] log likelihood: -125062.593981
EM: Round [42] log likelihood: -125062.588391
EM: Round [43] log likelihood: -125062.583018
EM: Round [44] log likelihood: -125062.577851
EM: Round [45] log likelihood: -125062.572879
EM: Round [46] log likelihood: -125062.568090
EM: Round [47] log likelihood: -125062.563477
EM: Round [48] log likelihood: -125062.559030
EM: Round [49] log likelihood: -125062.554741
EM: Round [50] log likelihood: -125062.550604
EM: Round [51] log likelihood: -125062.546611
EM: Round [52] log likelihood: -125062.542757
EM: Round [53] log likelihood: -125062.539034
EM: Round [54] log likelihood: -125062.535439
EM: Round [55] log likelihood: -125062.531964
EM: Round [56] log likelihood: -125062.528606
EM: Round [57] log likelihood: -125062.525360
EM: Round [58] log likelihood: -125062.522221
EM: Round [59] log likelihood: -125062.519185
EM: Round [60] log likelihood: -125062.516249
EM: Round [61] log likelihood: -125062.513407
EM: Round [62] log likelihood: -125062.510658
EM: Round [63] log likelihood: -125062.507996
EM: Round [64] log likelihood: -125062.505420
EM: Round [65] log likelihood: -125062.502926
EM: Round [66] log likelihood: -125062.500511
EM: Round [67] log likelihood: -125062.498171
EM: Round [68] log likelihood: -125062.495906
EM: Round [69] log likelihood: -125062.493711
EM: Round [70] log likelihood: -125062.491584
EM: Round [71] log likelihood: -125062.489524
EM: Round [72] log likelihood: -125062.487527
EM: Round [73] log likelihood: -125062.485592
EM: Round [74] log likelihood: -125062.483716
EM: Round [75] log likelihood: -125062.481897
EM: Round [76] log likelihood: -125062.480134
EM: Round [77] log likelihood: -125062.478424
EM: Round [78] log likelihood: -125062.476767
EM: Round [79] log likelihood: -125062.475159
EM: Round [80] log likelihood: -125062.473600
EM: Round [81] log likelihood: -125062.472088
EM: Round [82] log likelihood: -125062.470621
EM: Round [83] log likelihood: -125062.469198
EM: Round [84] log likelihood: -125062.467817
EM: Round [85] log likelihood: -125062.466478
EM: Round [86] log likelihood: -125062.465178
EM: Round [87] log likelihood: -125062.463917
EM: Round [88] log likelihood: -125062.462693
EM: Round [89] log likelihood: -125062.461505
EM: Round [90] log likelihood: -125062.460353
EM: Round [91] log likelihood: -125062.459234
EM: Round [92] log likelihood: -125062.458148
EM: Round [93] log likelihood: -125062.457093
EM: Round [94] log likelihood: -125062.456070
EM: Round [95] log likelihood: -125062.455076
EM: Round [96] log likelihood: -125062.454111
EM: Round [97] log likelihood: -125062.453175
EM: Round [98] log likelihood: -125062.452265
EM: Round [99] log likelihood: -125062.451382
EM: Round [100] log likelihood: -125062.450524
EM: Round [101] log likelihood: -125062.449692
EM: Round [102] log likelihood: -125062.448883
EM: Round [103] log likelihood: -125062.448097
EM: Round [104] log likelihood: -125062.447334
EM: Round [105] log likelihood: -125062.446593
EM: Round [106] log likelihood: -125062.445874
EM: Round [107] log likelihood: -125062.445174
EM: Round [108] log likelihood: -125062.444495
EM: Round [109] log likelihood: -125062.443836
EM: Round [110] log likelihood: -125062.443195
EM: Round [111] log likelihood: -125062.442572
EM: Round [112] log likelihood: -125062.441967
EM: Round [113] log likelihood: -125062.441379
EM: Round [114] log likelihood: -125062.440808
EM: Round [115] log likelihood: -125062.440253
EM: Round [116] log likelihood: -125062.439714
EM: Round [117] log likelihood: -125062.439190
EM: Round [118] log likelihood: -125062.438681
EM: Round [119] log likelihood: -125062.438186
EM: Round [120] log likelihood: -125062.437705
EM: Round [121] log likelihood: -125062.437238
EM: Round [122] log likelihood: -125062.436784
EM: Round [123] log likelihood: -125062.436343
EM: Round [124] log likelihood: -125062.435914
EM: Round [125] log likelihood: -125062.435497
EM: Round [126] log likelihood: -125062.435092
EM: Round [127] log likelihood: -125062.434698
EM: Round [128] log likelihood: -125062.434315
EM: Round [129] log likelihood: -125062.433943
EM: Round [130] log likelihood: -125062.433581
EM: Round [131] log likelihood: -125062.433229
EM: Round [132] log likelihood: -125062.432887
EM: Round [133] log likelihood: -125062.432555
EM: Round [134] log likelihood: -125062.432232
EM: Round [135] log likelihood: -125062.431918
EM: Round [136] log likelihood: -125062.431612
EM: Round [137] log likelihood: -125062.431315
EM: Round [138] log likelihood: -125062.431026
EM: Round [139] log likelihood: -125062.430746
EM: Round [140] log likelihood: -125062.430473
EM: Round [141] log likelihood: -125062.430207
EM: Round [142] log likelihood: -125062.429949
EM: Round [143] log likelihood: -125062.429698
EM: Round [144] log likelihood: -125062.429454
EM: Round [145] log likelihood: -125062.429217
EM: Round [146] log likelihood: -125062.428986
EM: Round [147] log likelihood: -125062.428761
EM: Round [148] log likelihood: -125062.428543
EM: Round [149] log likelihood: -125062.428330
EM: Round [150] log likelihood: -125062.428124
EM: Round [151] log likelihood: -125062.427923
EM: Round [152] log likelihood: -125062.427728
EM: Round [153] log likelihood: -125062.427538
EM: Round [154] log likelihood: -125062.427353
EM: Round [155] log likelihood: -125062.427173
EM: Round [156] log likelihood: -125062.426998
EM: Round [157] log likelihood: -125062.426828
EM: Round [158] log likelihood: -125062.426662
EM: Round [159] log likelihood: -125062.426501
EM: Round [160] log likelihood: -125062.426344
EM: Round [161] log likelihood: -125062.426192
EM: Round [162] log likelihood: -125062.426044
EM: Round [163] log likelihood: -125062.425899
EM: Round [164] log likelihood: -125062.425759
EM: Round [165] log likelihood: -125062.425622
EM: Round [166] log likelihood: -125062.425489
EM: Round [167] log likelihood: -125062.425360
EM: Round [168] log likelihood: -125062.425234
EM: Round [169] log likelihood: -125062.425112
EM: Round [170] log likelihood: -125062.424993
EM: Round [171] log likelihood: -125062.424877
EM: Round [172] log likelihood: -125062.424764
EM: Round [173] log likelihood: -125062.424654
EM: Round [174] log likelihood: -125062.424547
EM: Round [175] log likelihood: -125062.424443
EM: Round [176] log likelihood: -125062.424342
EM: Round [177] log likelihood: -125062.424243
EM: Stopping iterations at round 177 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -125106.931276
EM: Round [1] log likelihood: -125053.701627
EM: Round [2] log likelihood: -125034.158046
EM: Round [3] log likelihood: -125025.010633
EM: Round [4] log likelihood: -125020.287770
EM: Round [5] log likelihood: -125017.713677
EM: Round [6] log likelihood: -125016.245836
EM: Round [7] log likelihood: -125015.370730
EM: Round [8] log likelihood: -125014.825183
EM: Round [9] log likelihood: -125014.469945
EM: Round [10] log likelihood: -125014.228954
EM: Round [11] log likelihood: -125014.059237
EM: Round [12] log likelihood: -125013.935645
EM: Round [13] log likelihood: -125013.842922
EM: Round [14] log likelihood: -125013.771486
EM: Round [15] log likelihood: -125013.715117
EM: Round [16] log likelihood: -125013.669658
EM: Round [17] log likelihood: -125013.632256
EM: Round [18] log likelihood: -125013.600910
EM: Round [19] log likelihood: -125013.574189
EM: Round [20] log likelihood: -125013.551053
EM: Round [21] log likelihood: -125013.530736
EM: Round [22] log likelihood: -125013.512668
EM: Round [23] log likelihood: -125013.496415
EM: Round [24] log likelihood: -125013.481650
EM: Round [25] log likelihood: -125013.468120
EM: Round [26] log likelihood: -125013.455628
EM: Round [27] log likelihood: -125013.444021
EM: Round [28] log likelihood: -125013.433175
EM: Round [29] log likelihood: -125013.422993
EM: Round [30] log likelihood: -125013.413397
EM: Round [31] log likelihood: -125013.404322
EM: Round [32] log likelihood: -125013.395715
EM: Round [33] log likelihood: -125013.387532
EM: Round [34] log likelihood: -125013.379736
EM: Round [35] log likelihood: -125013.372295
EM: Round [36] log likelihood: -125013.365182
EM: Round [37] log likelihood: -125013.358374
EM: Round [38] log likelihood: -125013.351850
EM: Round [39] log likelihood: -125013.345592
EM: Round [40] log likelihood: -125013.339583
EM: Round [41] log likelihood: -125013.333810
EM: Round [42] log likelihood: -125013.328259
EM: Round [43] log likelihood: -125013.322919
EM: Round [44] log likelihood: -125013.317778
EM: Round [45] log likelihood: -125013.312827
EM: Round [46] log likelihood: -125013.308056
EM: Round [47] log likelihood: -125013.303456
EM: Round [48] log likelihood: -125013.299021
EM: Round [49] log likelihood: -125013.294742
EM: Round [50] log likelihood: -125013.290613
EM: Round [51] log likelihood: -125013.286627
EM: Round [52] log likelihood: -125013.282778
EM: Round [53] log likelihood: -125013.279060
EM: Round [54] log likelihood: -125013.275469
EM: Round [55] log likelihood: -125013.271998
EM: Round [56] log likelihood: -125013.268642
EM: Round [57] log likelihood: -125013.265398
EM: Round [58] log likelihood: -125013.262262
EM: Round [59] log likelihood: -125013.259228
EM: Round [60] log likelihood: -125013.256292
EM: Round [61] log likelihood: -125013.253452
EM: Round [62] log likelihood: -125013.250704
EM: Round [63] log likelihood: -125013.248044
EM: Round [64] log likelihood: -125013.245469
EM: Round [65] log likelihood: -125013.242975
EM: Round [66] log likelihood: -125013.240561
EM: Round [67] log likelihood: -125013.238223
EM: Round [68] log likelihood: -125013.235958
EM: Round [69] log likelihood: -125013.233764
EM: Round [70] log likelihood: -125013.231638
EM: Round [71] log likelihood: -125013.229578
EM: Round [72] log likelihood: -125013.227582
EM: Round [73] log likelihood: -125013.225647
EM: Round [74] log likelihood: -125013.223772
EM: Round [75] log likelihood: -125013.221954
EM: Round [76] log likelihood: -125013.220191
EM: Round [77] log likelihood: -125013.218482
EM: Round [78] log likelihood: -125013.216825
EM: Round [79] log likelihood: -125013.215218
EM: Round [80] log likelihood: -125013.213660
EM: Round [81] log likelihood: -125013.212148
EM: Round [82] log likelihood: -125013.210682
EM: Round [83] log likelihood: -125013.209259
EM: Round [84] log likelihood: -125013.207879
EM: Round [85] log likelihood: -125013.206540
EM: Round [86] log likelihood: -125013.205241
EM: Round [87] log likelihood: -125013.203980
EM: Round [88] log likelihood: -125013.202757
EM: Round [89] log likelihood: -125013.201570
EM: Round [90] log likelihood: -125013.200417
EM: Round [91] log likelihood: -125013.199299
EM: Round [92] log likelihood: -125013.198213
EM: Round [93] log likelihood: -125013.197159
EM: Round [94] log likelihood: -125013.196136
EM: Round [95] log likelihood: -125013.195143
EM: Round [96] log likelihood: -125013.194179
EM: Round [97] log likelihood: -125013.193242
EM: Round [98] log likelihood: -125013.192333
EM: Round [99] log likelihood: -125013.191451
EM: Round [100] log likelihood: -125013.190593
EM: Round [101] log likelihood: -125013.189761
EM: Round [102] log likelihood: -125013.188953
EM: Round [103] log likelihood: -125013.188167
EM: Round [104] log likelihood: -125013.187405
EM: Round [105] log likelihood: -125013.186664
EM: Round [106] log likelihood: -125013.185945
EM: Round [107] log likelihood: -125013.185246
EM: Round [108] log likelihood: -125013.184567
EM: Round [109] log likelihood: -125013.183908
EM: Round [110] log likelihood: -125013.183267
EM: Round [111] log likelihood: -125013.182645
EM: Round [112] log likelihood: -125013.182040
EM: Round [113] log likelihood: -125013.181453
EM: Round [114] log likelihood: -125013.180882
EM: Round [115] log likelihood: -125013.180327
EM: Round [116] log likelihood: -125013.179789
EM: Round [117] log likelihood: -125013.179265
EM: Round [118] log likelihood: -125013.178756
EM: Round [119] log likelihood: -125013.178262
EM: Round [120] log likelihood: -125013.177781
EM: Round [121] log likelihood: -125013.177314
EM: Round [122] log likelihood: -125013.176860
EM: Round [123] log likelihood: -125013.176419
EM: Round [124] log likelihood: -125013.175991
EM: Round [125] log likelihood: -125013.175574
EM: Round [126] log likelihood: -125013.175169
EM: Round [127] log likelihood: -125013.174775
EM: Round [128] log likelihood: -125013.174393
EM: Round [129] log likelihood: -125013.174021
EM: Round [130] log likelihood: -125013.173659
EM: Round [131] log likelihood: -125013.173308
EM: Round [132] log likelihood: -125013.172966
EM: Round [133] log likelihood: -125013.172634
EM: Round [134] log likelihood: -125013.172311
EM: Round [135] log likelihood: -125013.171997
EM: Round [136] log likelihood: -125013.171692
EM: Round [137] log likelihood: -125013.171395
EM: Round [138] log likelihood: -125013.171107
EM: Round [139] log likelihood: -125013.170826
EM: Round [140] log likelihood: -125013.170553
EM: Round [141] log likelihood: -125013.170288
EM: Round [142] log likelihood: -125013.170030
EM: Round [143] log likelihood: -125013.169779
EM: Round [144] log likelihood: -125013.169535
EM: Round [145] log likelihood: -125013.169298
EM: Round [146] log likelihood: -125013.169068
EM: Round [147] log likelihood: -125013.168843
EM: Round [148] log likelihood: -125013.168625
EM: Round [149] log likelihood: -125013.168413
EM: Round [150] log likelihood: -125013.168206
EM: Round [151] log likelihood: -125013.168006
EM: Round [152] log likelihood: -125013.167811
EM: Round [153] log likelihood: -125013.167621
EM: Round [154] log likelihood: -125013.167436
EM: Round [155] log likelihood: -125013.167256
EM: Round [156] log likelihood: -125013.167081
EM: Round [157] log likelihood: -125013.166911
EM: Round [158] log likelihood: -125013.166746
EM: Round [159] log likelihood: -125013.166585
EM: Round [160] log likelihood: -125013.166429
EM: Round [161] log likelihood: -125013.166276
EM: Round [162] log likelihood: -125013.166128
EM: Round [163] log likelihood: -125013.165984
EM: Round [164] log likelihood: -125013.165844
EM: Round [165] log likelihood: -125013.165707
EM: Round [166] log likelihood: -125013.165575
EM: Round [167] log likelihood: -125013.165445
EM: Round [168] log likelihood: -125013.165320
EM: Round [169] log likelihood: -125013.165197
EM: Round [170] log likelihood: -125013.165078
EM: Round [171] log likelihood: -125013.164962
EM: Round [172] log likelihood: -125013.164850
EM: Round [173] log likelihood: -125013.164740
EM: Round [174] log likelihood: -125013.164633
EM: Round [175] log likelihood: -125013.164529
EM: Round [176] log likelihood: -125013.164428
EM: Round [177] log likelihood: -125013.164330
EM: Stopping iterations at round 177 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 133389273 > /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir > /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir --annotate /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir
-done, see /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1264, filtered: 8788)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.2ErKiAA3Ab/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.2ErKiAA3Ab/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000176700.20]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000226029.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000233013.10]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000272259.5]
WARNING, no entry stored in dbm for [ENSG00000265369.3]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000174715.7]
WARNING, no entry stored in dbm for [ENSG00000283342.1]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000231527.7]
WARNING, no entry stored in dbm for [ENSG00000225171.2]
WARNING, no entry stored in dbm for [ENSG00000229829.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000273986.1]
WARNING, no entry stored in dbm for [ENSG00000266441.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000284633.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000286493.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000260581.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000229956.11]
WARNING, no entry stored in dbm for [ENSG00000241464.3]
WARNING, no entry stored in dbm for [ENSG00000267279.2]
WARNING, no entry stored in dbm for [ENSG00000220248.1]
WARNING, no entry stored in dbm for [ENSG00000269439.6]
WARNING, no entry stored in dbm for [ENSG00000232998.3]
WARNING, no entry stored in dbm for [ENSG00000228010.6]
WARNING, no entry stored in dbm for [ENSG00000288086.1]
WARNING, no entry stored in dbm for [ENSG00000282602.1]
WARNING, no entry stored in dbm for [ENSG00000267686.2]
WARNING, no entry stored in dbm for [ENSG00000232496.2]
WARNING, no entry stored in dbm for [ENSG00000272848.2]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000258168.6]
WARNING, no entry stored in dbm for [ENSG00000240687.2]
WARNING, no entry stored in dbm for [ENSG00000272397.1]
WARNING, no entry stored in dbm for [ENSG00000278654.1]
WARNING, no entry stored in dbm for [ENSG00000284959.2]
WARNING, no entry stored in dbm for [ENSG00000286764.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000254163.1]
WARNING, no entry stored in dbm for [ENSG00000203729.8]
WARNING, no entry stored in dbm for [ENSG00000257210.1]
WARNING, no entry stored in dbm for [ENSG00000224437.2]
WARNING, no entry stored in dbm for [ENSG00000233338.1]
WARNING, no entry stored in dbm for [ENSG00000287243.2]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000282897.1]
WARNING, no entry stored in dbm for [ENSG00000272902.2]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000223727.6]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000259479.6]
WARNING, no entry stored in dbm for [ENSG00000274397.1]
WARNING, no entry stored in dbm for [ENSG00000280219.1]
WARNING, no entry stored in dbm for [ENSG00000287299.1]
WARNING, no entry stored in dbm for [ENSG00000230079.1]
WARNING, no entry stored in dbm for [ENSG00000249846.7]
WARNING, no entry stored in dbm for [ENSG00000227769.7]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000266433.6]
WARNING, no entry stored in dbm for [ENSG00000273133.1]
WARNING, no entry stored in dbm for [ENSG00000224713.4]
WARNING, no entry stored in dbm for [ENSG00000242207.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000160172.10]
WARNING, no entry stored in dbm for [ENSG00000286262.1]
WARNING, no entry stored in dbm for [ENSG00000256422.6]
WARNING, no entry stored in dbm for [ENSG00000240996.1]
WARNING, no entry stored in dbm for [ENSG00000234948.2]
WARNING, no entry stored in dbm for [ENSG00000266101.1]
WARNING, no entry stored in dbm for [ENSG00000279232.2]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000267218.2]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000283103.3]
WARNING, no entry stored in dbm for [ENSG00000228956.8]
WARNING, no entry stored in dbm for [ENSG00000287603.1]
WARNING, no entry stored in dbm for [ENSG00000279429.1]
WARNING, no entry stored in dbm for [ENSG00000203865.11]
WARNING, no entry stored in dbm for [ENSG00000235804.2]
WARNING, no entry stored in dbm for [ENSG00000237840.6]
WARNING, no entry stored in dbm for [ENSG00000242285.1]
WARNING, no entry stored in dbm for [ENSG00000230383.1]
WARNING, no entry stored in dbm for [ENSG00000240509.1]
WARNING, no entry stored in dbm for [ENSG00000229519.2]
WARNING, no entry stored in dbm for [ENSG00000244083.1]
WARNING, no entry stored in dbm for [ENSG00000241286.2]
WARNING, no entry stored in dbm for [ENSG00000215381.3]
WARNING, no entry stored in dbm for [ENSG00000248439.2]
WARNING, no entry stored in dbm for [ENSG00000213935.3]
WARNING, no entry stored in dbm for [ENSG00000213653.4]
WARNING, no entry stored in dbm for [ENSG00000239315.4]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000199933.1]
WARNING, no entry stored in dbm for [ENSG00000206625.1]
WARNING, no entry stored in dbm for [ENSG00000264229.1]
WARNING, no entry stored in dbm for [ENSG00000199849.1]
WARNING, no entry stored in dbm for [ENSG00000202538.1]
WARNING, no entry stored in dbm for [ENSG00000222328.1]
WARNING, no entry stored in dbm for [ENSG00000200296.1]
WARNING, no entry stored in dbm for [ENSG00000249642.2]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000222714.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000200794.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000202406.1]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000236948.2]
WARNING, no entry stored in dbm for [ENSG00000227204.1]
WARNING, no entry stored in dbm for [ENSG00000278147.1]
WARNING, no entry stored in dbm for [ENSG00000249936.3]
WARNING, no entry stored in dbm for [ENSG00000241772.2]
WARNING, no entry stored in dbm for [ENSG00000281128.2]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000173077.16]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000232000.3]
WARNING, no entry stored in dbm for [ENSG00000256963.1]
WARNING, no entry stored in dbm for [ENSG00000161103.11]
WARNING, no entry stored in dbm for [ENSG00000256029.6]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000287559.1]
WARNING, no entry stored in dbm for [ENSG00000267437.1]
WARNING, no entry stored in dbm for [ENSG00000275131.3]
WARNING, no entry stored in dbm for [ENSG00000233396.8]
WARNING, no entry stored in dbm for [ENSG00000272143.1]
WARNING, no entry stored in dbm for [ENSG00000265369.3]
WARNING, no entry stored in dbm for [ENSG00000215546.2]
WARNING, no entry stored in dbm for [ENSG00000257542.5]
WARNING, no entry stored in dbm for [ENSG00000234655.3]
WARNING, no entry stored in dbm for [ENSG00000241810.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000286952.1]
WARNING, no entry stored in dbm for [ENSG00000225377.6]
WARNING, no entry stored in dbm for [ENSG00000259275.4]
WARNING, no entry stored in dbm for [ENSG00000189238.6]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000277406.2]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000280623.1]
WARNING, no entry stored in dbm for [ENSG00000248671.8]
WARNING, no entry stored in dbm for [ENSG00000284620.2]
WARNING, no entry stored in dbm for [ENSG00000287117.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000133519.12]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000278867.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000210127.1]
WARNING, no entry stored in dbm for [ENSG00000261971.8]
WARNING, no entry stored in dbm for [ENSG00000227517.7]
WARNING, no entry stored in dbm for [ENSG00000255571.9]
WARNING, no entry stored in dbm for [ENSG00000275449.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000245832.7]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000235286.1]
WARNING, no entry stored in dbm for [ENSG00000242078.1]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000259516.2]
WARNING, no entry stored in dbm for [ENSG00000278052.1]
WARNING, no entry stored in dbm for [ENSG00000238242.2]
WARNING, no entry stored in dbm for [ENSG00000250668.2]
WARNING, no entry stored in dbm for [ENSG00000235643.2]
WARNING, no entry stored in dbm for [ENSG00000244128.7]
WARNING, no entry stored in dbm for [ENSG00000229891.2]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000258441.1]
WARNING, no entry stored in dbm for [ENSG00000125514.9]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000286348.1]
WARNING, no entry stored in dbm for [ENSG00000215208.3]
WARNING, no entry stored in dbm for [ENSG00000259172.1]
WARNING, no entry stored in dbm for [ENSG00000256721.1]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000242893.3]
WARNING, no entry stored in dbm for [ENSG00000276955.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000213211.2]
WARNING, no entry stored in dbm for [ENSG00000261575.2]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000179362.14]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000238013.1]
WARNING, no entry stored in dbm for [ENSG00000206417.8]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000223698.3]
WARNING, no entry stored in dbm for [ENSG00000255769.7]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000228718.2]
WARNING, no entry stored in dbm for [ENSG00000216917.2]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000225378.1]
WARNING, no entry stored in dbm for [ENSG00000261407.2]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000260628.5]
WARNING, no entry stored in dbm for [ENSG00000213489.3]
WARNING, no entry stored in dbm for [ENSG00000275620.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000288531.1]
WARNING, no entry stored in dbm for [ENSG00000249642.2]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000271379.1]
WARNING, no entry stored in dbm for [ENSG00000249162.1]
WARNING, no entry stored in dbm for [ENSG00000233508.3]
WARNING, no entry stored in dbm for [ENSG00000260112.1]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000235790.7]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000275139.1]
WARNING, no entry stored in dbm for [ENSG00000250900.6]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000215572.2]
WARNING, no entry stored in dbm for [ENSG00000232774.8]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000232202.1]
WARNING, no entry stored in dbm for [ENSG00000237928.6]
WARNING, no entry stored in dbm for [ENSG00000287485.1]
WARNING, no entry stored in dbm for [ENSG00000275139.1]
WARNING, no entry stored in dbm for [ENSG00000230955.1]
WARNING, no entry stored in dbm for [ENSG00000279711.1]
WARNING, no entry stored in dbm for [ENSG00000251095.7]
WARNING, no entry stored in dbm for [ENSG00000205584.6]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000260942.1]
WARNING, no entry stored in dbm for [ENSG00000198590.12]
WARNING, no entry stored in dbm for [ENSG00000255857.6]
WARNING, no entry stored in dbm for [ENSG00000279712.1]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000228008.1]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000180389.7]
WARNING, no entry stored in dbm for [ENSG00000284237.1]
WARNING, no entry stored in dbm for [ENSG00000204072.3]
WARNING, no entry stored in dbm for [ENSG00000215409.4]
WARNING, no entry stored in dbm for [ENSG00000273492.6]
WARNING, no entry stored in dbm for [ENSG00000240775.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000285561.1]
WARNING, no entry stored in dbm for [ENSG00000287088.1]
WARNING, no entry stored in dbm for [ENSG00000287459.1]
WARNING, no entry stored in dbm for [ENSG00000259516.2]
WARNING, no entry stored in dbm for [ENSG00000137970.7]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000234429.1]
WARNING, no entry stored in dbm for [ENSG00000285597.1]
WARNING, no entry stored in dbm for [ENSG00000234712.1]
WARNING, no entry stored in dbm for [ENSG00000273192.1]
WARNING, no entry stored in dbm for [ENSG00000288093.1]
WARNING, no entry stored in dbm for [ENSG00000258314.3]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000276888.1]
WARNING, no entry stored in dbm for [ENSG00000237174.7]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000286414.1]
WARNING, no entry stored in dbm for [ENSG00000260460.1]
WARNING, no entry stored in dbm for [ENSG00000229913.1]
WARNING, no entry stored in dbm for [ENSG00000231358.4]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000253704.2]
WARNING, no entry stored in dbm for [ENSG00000225680.1]
WARNING, no entry stored in dbm for [ENSG00000261411.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000280710.3]
WARNING, no entry stored in dbm for [ENSG00000216307.2]
WARNING, no entry stored in dbm for [ENSG00000286071.1]
WARNING, no entry stored in dbm for [ENSG00000287385.1]
WARNING, no entry stored in dbm for [ENSG00000280070.1]
WARNING, no entry stored in dbm for [ENSG00000262049.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000276116.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000267737.1]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000274993.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000283662.1]
WARNING, no entry stored in dbm for [ENSG00000279602.1]
WARNING, no entry stored in dbm for [ENSG00000286136.2]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000241770.1]
WARNING, no entry stored in dbm for [ENSG00000254285.3]
WARNING, no entry stored in dbm for [ENSG00000277509.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000205976.4]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000275139.1]
WARNING, no entry stored in dbm for [ENSG00000264497.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000264164.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000227617.9]
WARNING, no entry stored in dbm for [ENSG00000254409.3]
WARNING, no entry stored in dbm for [ENSG00000241889.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000270190.1]
WARNING, no entry stored in dbm for [ENSG00000247765.2]
WARNING, no entry stored in dbm for [ENSG00000258590.5]
WARNING, no entry stored in dbm for [ENSG00000259874.1]
WARNING, no entry stored in dbm for [ENSG00000262503.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000215263.2]
WARNING, no entry stored in dbm for [ENSG00000240674.1]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000286373.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000197813.6]
WARNING, no entry stored in dbm for [ENSG00000270087.5]
WARNING, no entry stored in dbm for [ENSG00000237149.5]
WARNING, no entry stored in dbm for [ENSG00000264578.1]
WARNING, no entry stored in dbm for [ENSG00000274220.1]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000255655.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000218586.3]
WARNING, no entry stored in dbm for [ENSG00000250847.1]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000267243.6]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000278730.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000254817.1]
WARNING, no entry stored in dbm for [ENSG00000214330.4]
* STAR-Fusion complete. See output: /tmp/nxf.2ErKiAA3Ab/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)