Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/4db9959dc637a682d1710151220ecf/659_dts-T1-TRNA-1_A23MVY2LT4_2.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/36073a1b5dbb507ebd60653ea0f1c0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/36073a1b5dbb507ebd60653ea0f1c0/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_dts-T1-TRNA-1_A23MVY2LT4_2: vaf_p90=0.998430 -> CONTAMINATED (~0.1%)

Output saved to: 659_dts-T1-TRNA-1_A23MVY2LT4_2.predictions.csv
Summary: 1/1 samples flagged as contaminated