Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/4e54160246e57d82b776dc46c9d1ee/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/4e54160246e57d82b776dc46c9d1ee/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/ef6b1fe615b2090f84dfd2974bcffe/PX_FFPE_gb_TRNA_nat_01_A23MVY2LT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/ef6b1fe615b2090f84dfd2974bcffe/PX_FFPE_gb_TRNA_nat_01_A23MVY2LT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory