Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/5a1d293b1622f810f41a7f97b9848c/659_ciZ-T1-TRNA-1_A23MVY2LT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/9c87055ecb99041a94054480a7547b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/9c87055ecb99041a94054480a7547b/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_ciZ-T1-TRNA-1_A23MVY2LT4_1: vaf_p90=0.999670 -> CONTAMINATED (~0.0%)

Output saved to: 659_ciZ-T1-TRNA-1_A23MVY2LT4_1.predictions.csv
Summary: 1/1 samples flagged as contaminated