.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_ezg-T1-TRNA-1_A23MVY2LT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/68eaed5ddef83af2a736e2147b640f/.command.log
Size: 704 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (659_ezg-T1-TRNA-1_A23MVY2LT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/68eaed5ddef83af2a736e2147b640f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/7b4029079ddca49e26d2cbd9715f33/659_ezg-T1-TRNA-1_A23MVY2LT4_2.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/68eaed5ddef83af2a736e2147b640f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/7b4029079ddca49e26d2cbd9715f33/659_ezg-T1-TRNA-1_A23MVY2LT4_2.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 659_ezg-T1-TRNA-1_A23MVY2LT4_2.md.bam
[W::hts_idx_load3] The index file is older than the data file: 659_ezg-T1-TRNA-1_A23MVY2LT4_2.md.bai