AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 167
Pass (FILTER=PASS): 2 (1.2%)
Fail (FILTER=FAIL): 165 (98.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 81
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high): 5
confidence_below_min(medium<high);aih_curated_blacklist: 3
total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
aih_curated_blacklist: 1
Breakdown by confidence:
high: 2 pass, 4 fail (total: 6)
low: 0 pass, 55 fail (total: 55)
medium: 0 pass, 106 fail (total: 106)
Arriba filter: 167 rows -> 2 PASS; wrote PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.arriba.fusions.filtered.tsv and PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: PX_FFPE_bld_TRNA_nat_04_A23MVY2LT4_1.arriba.fusions.filter_summary.txt