Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/01759d33a31ebb3cf1f53d9076de2e/659_Mt-T1-TRNA-1_A23MVY2LT4_2.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/c1b852d565fea5498cb224986e84d4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/c1b852d565fea5498cb224986e84d4/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_Mt-T1-TRNA-1_A23MVY2LT4_2: vaf_p90=1.000000 -> CLEAN

Output saved to: 659_Mt-T1-TRNA-1_A23MVY2LT4_2.predictions.csv
Summary: 0/1 samples flagged as contaminated