Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/a239a5ab84a3b47c5fe7c637c2be65/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/a239a5ab84a3b47c5fe7c637c2be65/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/64747de8494144bc824c2056848344/659_bUW-T1-TRNA-1_A23MVY2LT4_2_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/64747de8494144bc824c2056848344/659_bUW-T1-TRNA-1_A23MVY2LT4_2_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory