Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/c15a97476d2347ca584e232d648603/659_bGW-T1-TRNA-1_A23MVY2LT4_2.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/fe33839c510599cadd35f5a665ee42/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/802ab56d568b78b759f3e94fe65b85/659_bGW-T1-TRNA-1_A23MVY2LT4_2
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/fe33839c510599cadd35f5a665ee42/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bGW-T1-TRNA-1_A23MVY2LT4_2/abundance.h5
Successfully converted 659_bGW-T1-TRNA-1_A23MVY2LT4_2/abundance.h5 to 659_bGW-T1-TRNA-1_A23MVY2LT4_2_kallisto_mqc.tsv
  Sample: 659_bGW-T1-TRNA-1_A23MVY2LT4_2
  Mean Fragment Length: 154.1 bp
  Median Fragment Length: 142.0 bp
  pct_mito_est_counts: 0.013%
  pct_ribo_est_counts: 1.311%
  pct_hk_est_counts: 0.71%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.028%
  pct_ribo_tpm: 4.343%
  pct_hk_tpm: 1.057%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.011%