AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 187
Pass (FILTER=PASS): 6 (3.2%)
Fail (FILTER=FAIL): 181 (96.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 54
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 11
confidence_below_min(low<high): 4
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 2
total_reads_below_min(6.0<8.0): 1
Breakdown by confidence:
high: 6 pass, 4 fail (total: 10)
low: 0 pass, 68 fail (total: 68)
medium: 0 pass, 109 fail (total: 109)
Arriba filter: 187 rows -> 6 PASS; wrote 659_cfy-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_cfy-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cfy-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt