NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bGW-T1-TRNA-1_A23MVY2LT4_2) - dev_rna_exp0014_exp0015-73d51683 - Workflow Tracker

Runs
dev_rna_exp0..15-73d51683
Tasks
GATK4_MARKDUPLICATES (659_bGW-T1-TRNA-1_A23MVY2LT4_2)

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Task Info

Status: succeeded
Hash: a8c1e50eedfc
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bGW-T1-TRNA-1_A23MVY2LT4_2
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: b2/c8b578
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/c8b5780e5712b27d62b873b7a9dab9
Native ID: nf-b2c8b5780e5712b27d62b873b7a9dab9-2979e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 60.5 GB / 74.0 GB
Process I/O (rchar / wchar): 62.8 GB / 44.1 GB
Disk I/O (read / write): 21.5 GB / 44.1 GB
Host: i-0accf8e1cee7296d5 ( spot)

Runtime

Submitted: Jun 08, 2026 2:04:38 AM
Completed: Jun 08, 2026 2:48:43 AM
Total Duration: 44m 4s

Phases

Queue: 1s
Execution: 41m 51s
Stage/Unstage: 2m 12s