Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/6209ae75911fc0ab4d1a1baa1ffc91/659_bGW-T1-TRNA-1_A23MVY2LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/d7d98dcd43aceeea135c818ddc0eb9/659_bGW-T1-TRNA-1_A23MVY2LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/2d64dc50a02a8b9d31d232315bbb2e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/2d64dc50a02a8b9d31d232315bbb2e/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bGW-T1-TRNA-1_A23MVY2LT4_1/abundance.h5
Successfully converted 659_bGW-T1-TRNA-1_A23MVY2LT4_1/abundance.h5 to 659_bGW-T1-TRNA-1_A23MVY2LT4_1_kallisto_mqc.tsv
  Sample: 659_bGW-T1-TRNA-1_A23MVY2LT4_1
  Mean Fragment Length: 154.9 bp
  Median Fragment Length: 144.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 1.243%
  pct_hk_est_counts: 0.655%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.033%
  pct_ribo_tpm: 4.078%
  pct_hk_tpm: 0.962%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.011%