Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/7238f0b0121c57c7f3d17977abb6da/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/7238f0b0121c57c7f3d17977abb6da/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/a863f4bbcbf97ab47bd8bc15910655/659_bua-T1-TRNA-1_A23MVY2LT4_2
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/21528cbe3de1d907f41b66e56a0dd6/659_bua-T1-TRNA-1_A23MVY2LT4_2.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bua-T1-TRNA-1_A23MVY2LT4_2/abundance.h5
Successfully converted 659_bua-T1-TRNA-1_A23MVY2LT4_2/abundance.h5 to 659_bua-T1-TRNA-1_A23MVY2LT4_2_kallisto_mqc.tsv
  Sample: 659_bua-T1-TRNA-1_A23MVY2LT4_2
  Mean Fragment Length: 154.2 bp
  Median Fragment Length: 142.0 bp
  pct_mito_est_counts: 0.005%
  pct_ribo_est_counts: 0.726%
  pct_hk_est_counts: 0.583%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.011%
  pct_ribo_tpm: 2.416%
  pct_hk_tpm: 0.874%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.012%