Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/2937842e374e5ce64bb1b8a9e1d323/659_bQZ-T1-TRNA-1_A23MVY2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/eac15eb5b2e1398b05616868534632/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/eac15eb5b2e1398b05616868534632/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory