Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/ad427ef5703d12c7c6b06c122cf808/659_bGc-T1-TRNA-1_A23MVY2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/0db63c5b19464652cd9bfb22f5326b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/0db63c5b19464652cd9bfb22f5326b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/ad427ef5703d12c7c6b06c122cf808/659_bGc-T1-TRNA-1_A23MVY2LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory