AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 119
Pass (FILTER=PASS): 5 (4.2%)
Fail (FILTER=FAIL): 114 (95.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 25
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high): 2
Breakdown by confidence:
high: 5 pass, 6 fail (total: 11)
low: 0 pass, 45 fail (total: 45)
medium: 0 pass, 63 fail (total: 63)
Arriba filter: 119 rows -> 5 PASS; wrote 659_6i-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_6i-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_6i-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt