AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 228
Pass (FILTER=PASS): 23 (10.1%)
Fail (FILTER=FAIL): 205 (89.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 43
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 30
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 27
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
Breakdown by confidence:
high: 23 pass, 3 fail (total: 26)
low: 0 pass, 105 fail (total: 105)
medium: 0 pass, 97 fail (total: 97)
Arriba filter: 228 rows -> 23 PASS; wrote 659_ezg-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_ezg-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_ezg-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt