Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/e54db301e56ded6d4b1bf36daa7dac/659_bua-T1-TRNA-1_A23MVY2LT4_2.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/03ef8b1082e56ad5201c8ae8befb0c/659_bua-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-bba2394f-ea06-4038-829e-f0bb41c45b0f/67/1d6e211d8f66f1c89f8ec9083ff96d/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/ea8c1376fb074463cf645bce71471b/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/ea8c1376fb074463cf645bce71471b/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
TPM3--NTRK1
starfusion
arriba
RARS1--WWC1
starfusion
arriba
CRACD--THEGL
starfusion
arriba
TLK2--AC240565.1
starfusion
TLK2P1--AC110079.1
starfusion
ADAMTS2--RARS1
starfusion
arriba
AVL9--SEPTIN7
arriba
AVL9--RNU6-1085P
arriba
ERBIN--ARHGAP26
arriba
TVP23C--CDRT4
arriba
WWC1--ADAMTS2
arriba
PCDHA4--PCDHA13
arriba
PCDHA4--PCDHAC1
arriba
PCDHA4--PCDHAC2
arriba
SPATA13--SPATA13
arriba
KANSL1--ARL17B
arriba
0%| | 0/16 [00:00<?, ?it/s]
Processing TPM3--NTRK1: 0%| | 0/16 [00:00<?, ?it/s]
Processing TPM3--NTRK1: 6%|▋ | 1/16 [00:00<00:01, 9.22it/s]
Processing RARS1--WWC1: 6%|▋ | 1/16 [00:00<00:01, 9.22it/s]
Processing RARS1--WWC1: 12%|█▎ | 2/16 [00:00<00:01, 9.46it/s]
Processing CRACD--THEGL: 12%|█▎ | 2/16 [00:00<00:01, 9.46it/s]
Processing CRACD--THEGL: 19%|█▉ | 3/16 [00:00<00:01, 9.54it/s]
Processing TLK2--AC240565.1: 19%|█▉ | 3/16 [00:00<00:01, 9.54it/s]
Processing TLK2--AC240565.1: 25%|██▌ | 4/16 [00:00<00:01, 9.58it/s]
Processing TLK2P1--AC110079.1: 25%|██▌ | 4/16 [00:00<00:01, 9.58it/s]
Processing TLK2P1--AC110079.1: 31%|███▏ | 5/16 [00:00<00:01, 9.60it/s]
Processing ADAMTS2--RARS1: 31%|███▏ | 5/16 [00:00<00:01, 9.60it/s]
Processing ADAMTS2--RARS1: 38%|███▊ | 6/16 [00:00<00:01, 9.61it/s]
Processing AVL9--SEPTIN7: 38%|███▊ | 6/16 [00:00<00:01, 9.61it/s]
Processing AVL9--SEPTIN7: 44%|████▍ | 7/16 [00:00<00:00, 9.62it/s]
Processing AVL9--RNU6-1085P: 44%|████▍ | 7/16 [00:00<00:00, 9.62it/s]
Processing AVL9--RNU6-1085P: 50%|█████ | 8/16 [00:00<00:00, 9.62it/s]
Processing ERBIN--ARHGAP26: 50%|█████ | 8/16 [00:00<00:00, 9.62it/s]
Processing ERBIN--ARHGAP26: 56%|█████▋ | 9/16 [00:00<00:00, 9.63it/s]
Processing TVP23C--CDRT4: 56%|█████▋ | 9/16 [00:00<00:00, 9.63it/s]
Processing TVP23C--CDRT4: 62%|██████▎ | 10/16 [00:01<00:00, 9.63it/s]
Processing WWC1--ADAMTS2: 62%|██████▎ | 10/16 [00:01<00:00, 9.63it/s]
Processing WWC1--ADAMTS2: 69%|██████▉ | 11/16 [00:01<00:00, 9.63it/s]
Processing PCDHA4--PCDHA13: 69%|██████▉ | 11/16 [00:01<00:00, 9.63it/s]
Processing PCDHA4--PCDHA13: 75%|███████▌ | 12/16 [00:01<00:00, 9.64it/s]
Processing PCDHA4--PCDHAC1: 75%|███████▌ | 12/16 [00:01<00:00, 9.64it/s]
Processing PCDHA4--PCDHAC1: 81%|████████▏ | 13/16 [00:01<00:00, 9.64it/s]
Processing PCDHA4--PCDHAC2: 81%|████████▏ | 13/16 [00:01<00:00, 9.64it/s]
Processing PCDHA4--PCDHAC2: 88%|████████▊ | 14/16 [00:01<00:00, 9.64it/s]
Processing SPATA13--SPATA13: 88%|████████▊ | 14/16 [00:01<00:00, 9.64it/s]
Processing SPATA13--SPATA13: 94%|█████████▍| 15/16 [00:01<00:00, 9.64it/s]
Processing KANSL1--ARL17B: 94%|█████████▍| 15/16 [00:01<00:00, 9.64it/s]
Processing KANSL1--ARL17B: 100%|██████████| 16/16 [00:01<00:00, 9.64it/s]
Processing KANSL1--ARL17B: 100%|██████████| 16/16 [00:01<00:00, 9.61it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory