Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/83b6d9d8a81c1eb4fcb74c9594a7b8/659_bhK-T1-TRNA-1_A23MVY2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/d3cb20baa5b2e29dc161e5b404eb51/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/d3cb20baa5b2e29dc161e5b404eb51/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory