AIH curated blacklist: matched 0 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 43
Pass (FILTER=PASS): 10 (23.3%)
Fail (FILTER=FAIL): 33 (76.7%)
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 5
confidence_below_min(medium<high): 4
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 1
total_reads_below_min(5.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 1
total_reads_below_min(6.0<8.0): 1
total_reads_below_min(2.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 1
Breakdown by confidence:
high: 10 pass, 3 fail (total: 13)
low: 0 pass, 18 fail (total: 18)
medium: 0 pass, 12 fail (total: 12)
Arriba filter: 43 rows -> 10 PASS; wrote 659_bCu-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_bCu-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bCu-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt