File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9dc61a9464b354b29953e1b01b9ad6/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/fb1e886ccc8eb9a817e26566af4b7d/659_buD-T1-TRNA-1_A23MVY2LT4_2
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/098ef142a709a3adf993b10252cbcf/659_buD-T1-TRNA-1_A23MVY2LT4_2.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9dc61a9464b354b29953e1b01b9ad6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9dc61a9464b354b29953e1b01b9ad6/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_buD-T1-TRNA-1_A23MVY2LT4_2/abundance.h5
Successfully converted 659_buD-T1-TRNA-1_A23MVY2LT4_2/abundance.h5 to 659_buD-T1-TRNA-1_A23MVY2LT4_2_kallisto_mqc.tsv
  Sample: 659_buD-T1-TRNA-1_A23MVY2LT4_2
  Mean Fragment Length: 152.8 bp
  Median Fragment Length: 140.0 bp
  pct_mito_est_counts: 0.012%
  pct_ribo_est_counts: 1.057%
  pct_hk_est_counts: 0.584%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.024%
  pct_ribo_tpm: 3.356%
  pct_hk_tpm: 0.871%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.012%