AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 143
Pass (FILTER=PASS): 9 (6.3%)
Fail (FILTER=FAIL): 134 (93.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 18
confidence_below_min(medium<high): 17
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(low<high): 6
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
aih_curated_blacklist: 1
Breakdown by confidence:
high: 9 pass, 5 fail (total: 14)
low: 0 pass, 77 fail (total: 77)
medium: 0 pass, 52 fail (total: 52)
Arriba filter: 143 rows -> 9 PASS; wrote 659_epP-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_epP-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_epP-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt