Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/fd6484376dc3f961c236fd195b4ef2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/371531b18c15c7bab08f6802c0ac59/659_rd-T1-TRNA-1_A23MVY2LT4_2_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/fd6484376dc3f961c236fd195b4ef2/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/371531b18c15c7bab08f6802c0ac59/659_rd-T1-TRNA-1_A23MVY2LT4_2_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory