AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 114
Pass (FILTER=PASS): 11 (9.6%)
Fail (FILTER=FAIL): 103 (90.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 16
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(2.0<8.0);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 1
aih_curated_blacklist: 1
Breakdown by confidence:
high: 11 pass, 4 fail (total: 15)
low: 0 pass, 61 fail (total: 61)
medium: 0 pass, 38 fail (total: 38)
Arriba filter: 114 rows -> 11 PASS; wrote 659_gK-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered.tsv and 659_gK-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_gK-T1-TRNA-1_A23MVY2LT4_2.arriba.fusions.filter_summary.txt