Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/ccebab75d7e089188d14cf3ad92873/PX_FFPE_bld_TRNA_nat_02_A23MVY2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/e7cfab2ea8e2789f9cb3fef77f7cbe/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/e7cfab2ea8e2789f9cb3fef77f7cbe/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory