Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/0b276ab55153ea3b480615ed952537/659_Dl-T1-TRNA-1_A23MVY2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/3f8a3d0fbaf63be48a0015bda1eab0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/3f8a3d0fbaf63be48a0015bda1eab0/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory