NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_cIX-T1-TRNA-1_A23MVY2LT4_2) - dev_rna_exp0014_exp0015-73d51683 - Workflow Tracker

Runs
dev_rna_exp0..15-73d51683
Tasks
GATK4_MARKDUPLICATES (659_cIX-T1-TRNA-1_A23MVY2LT4_2)

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Task Info

Status: succeeded
Hash: fec05e49a99d
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_cIX-T1-TRNA-1_A23MVY2LT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 4c/608094
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/6080941d0ab3b634d3bc212d9d1cc2
Native ID: nf-4c6080941d0ab3b634d3bc212d9d1cc2-dcb06

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 119.9 GB / 148.0 GB
Process I/O (rchar / wchar): 55.3 GB / 37.2 GB
Disk I/O (read / write): 3.0 GB / 37.2 GB
Host: i-0e3e675b1e2565975 ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:38:41 AM
Completed: Jun 08, 2026 3:22:20 AM
Total Duration: 43m 38s

Phases

Queue: 5s
Execution: 41m 28s
Stage/Unstage: 2m 5s

Attempt 1

Execution

Status: failed
Hash: 0a/479ee1
Failure Reason: BackoffLimitExceeded ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/479ee17d580a1905fddd07642cbb4d
Native ID: nf-0a479ee17d580a1905fddd07642cbb4d-2f653

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08225c8148dd33143 ( spot)

Runtime

Submitted: Jun 08, 2026 1:51:37 AM
Completed: Jun 08, 2026 2:38:41 AM
Total Duration: 47m 3s

Phases

Queue: 47m 3s
Execution: -
Stage/Unstage: -