File Info
- Filename
- 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
- Size
- 6.3 KB
- Workflow Run
- dev_rna_exp0016-2cae617
- Published
- May 16, 2026 9:44 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| NFKB1--CISD2 | 261 | 1 | 261.00 | 0.99 | NFKB1^ENSG00000109320.13 | 15079 | chr4:102580639:+ | CISD2^ENSG00000145354.12 | 38245 | chr4:102885216:+ | ONLY_REF_SPLICE | YES | 305 | 656 | 0.86 | 0.40 | GT | 1.7232 | AG | 1.9219 | 0.8901 | 1890 | 0 |
| NFKB1--CISD2 | 2 | 1 | 2.00 | 0.01 | NFKB1^ENSG00000109320.13 | 15079 | chr4:102580639:+ | CISD2^ENSG00000145354.12 | 37142 | chr4:102882771:+ | ONLY_REF_SPLICE | YES | 305 | 633 | 0.01 | 0.01 | GT | 1.7232 | AG | 1.7465 | 0.0068 | 2786 | 0 |
| NFKB1--CISD2 | 1 | 0 | 1.00 | 0.00 | NFKB1^ENSG00000109320.13 | 13974 | chr4:102579039:+ | CISD2^ENSG00000145354.12 | 38245 | chr4:102885216:+ | ONLY_REF_SPLICE | YES | 396 | 656 | 0.01 | 0.00 | GT | 1.9329 | AG | 1.9219 | 0.0034 | 1533 | 0 |
| NFKB1--CISD2 | 1 | 0 | 1.00 | 0.00 | NFKB1^ENSG00000109320.13 | 11974 | chr4:102577039:+ | CISD2^ENSG00000145354.12 | 38245 | chr4:102885216:+ | ONLY_REF_SPLICE | YES | 376 | 656 | 0.01 | 0.00 | GT | 1.7465 | AG | 1.9219 | 0.0034 | 1607 | 0 |
| PKD1--PKMYT1 | 248 | 1 | 248.00 | 1.00 | PKD1^ENSG00000008710.20 | 23890 | chr16:2097728:- | PKMYT1^ENSG00000127564.17 | 44544 | chr16:2968515:- | ONLY_REF_SPLICE | YES | 254 | 48 | 0.98 | 5.10 | GT | 1.8256 | AG | 1.6895 | 0.8459 | 545 | 0 |
| CASTOR2--LIMK1 | 168 | 0 | 168.00 | 0.00 | CASTOR2^ENSG00000274070.2 | 1394 | chr7:74965098:+ | LIMK1^ENSG00000106683.15 | 23760 | chr7:74096622:+ | ONLY_REF_SPLICE | YES | 235 | 623 | 0.72 | 0.27 | GT | 1.8892 | AG | 1.8323 | 0.5708 | 1178 | 0 |
| TRIM35--SCARA5 | 135 | 0 | 135.00 | 0.00 | TRIM35^ENSG00000104228.13 | 1472 | chr8:27310801:- | SCARA5^ENSG00000168079.17 | 16772 | chr8:27922245:- | ONLY_REF_SPLICE | YES | 274 | 32 | 0.49 | 4.12 | GT | 1.8892 | AG | 1.8323 | 0.4586 | 263 | 0 |
| TRIM35--SCARA5 | 5 | 0 | 5.00 | 0.00 | TRIM35^ENSG00000104228.13 | 1472 | chr8:27310801:- | SCARA5^ENSG00000168079.17 | 18447 | chr8:27909743:- | ONLY_REF_SPLICE | YES | 274 | 112 | 0.02 | 0.05 | GT | 1.8892 | AG | 1.5058 | 0.017 | 1470 | 0 |
| TLK2--AC240565.1 | 106 | 0 | 106.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 371 | 44 | 0.29 | 2.38 | GT | 1.8892 | AG | 1.8892 | 0.3601 | 1734 | 0 |
| VTI1A--TCF7L2 | 104 | 0 | 104.00 | 0.00 | VTI1A^ENSG00000151532.14 | 6899 | chr10:112464657:+ | TCF7L2^ENSG00000148737.17 | 26793 | chr10:113040025:+ | ONLY_REF_SPLICE | YES | 296 | 517 | 0.35 | 0.20 | GT | 1.9086 | AG | 1.8892 | 0.3533 | 3451 | 0 |
| VTI1A--TCF7L2 | 1 | 0 | 1.00 | 0.00 | VTI1A^ENSG00000151532.14 | 6899 | chr10:112464657:+ | TCF7L2^ENSG00000148737.17 | 35607 | chr10:113141184:+ | ONLY_REF_SPLICE | YES | 296 | 325 | 0.01 | 0.01 | GT | 1.9086 | AG | 1.8892 | 0.0034 | 1870 | 0 |
| VTI1A--TCF7L2 | 1 | 0 | 1.00 | 0.00 | VTI1A^ENSG00000151532.14 | 1470 | chr10:112447467:+ | TCF7L2^ENSG00000148737.17 | 26793 | chr10:113040025:+ | ONLY_REF_SPLICE | YES | 539 | 517 | 0.00 | 0.00 | GT | 1.7232 | AG | 1.8892 | 0.0034 | 2885 | 0 |
| VTI1A--TCF7L2 | 1 | 0 | 1.00 | 0.00 | VTI1A^ENSG00000151532.14 | 1470 | chr10:112447467:+ | TCF7L2^ENSG00000148737.17 | 35607 | chr10:113141184:+ | ONLY_REF_SPLICE | YES | 539 | 325 | 0.00 | 0.01 | GT | 1.7232 | AG | 1.8892 | 0.0034 | 5729 | 0 |
| GRK2--KDM2A | 90 | 0 | 90.00 | 0.00 | GRK2^ENSG00000173020.11 | 4223 | chr11:67277348:+ | KDM2A^ENSG00000173120.15 | 46158 | chr11:67257484:+ | INCL_NON_REF_SPLICE | YES | 1253 | 0 | 0.07 | 91.00 | GT | 1.9899 | AG | 1.8892 | 0.3058 | 76 | 1 |
| GRAMD4--WDR97 | 59 | 1 | 59.00 | 1.00 | GRAMD4^ENSG00000075240.17 | 2229 | chr22:46577290:+ | WDR97^ENSG00000179698.14 | 34193 | chr8:144115943:+ | ONLY_REF_SPLICE | YES | 79 | 299 | 0.76 | 0.20 | GT | 1.9656 | AG | 1.6729 | 0.2038 | 319 | 0 |
| TENT4B--RMI2 | 43 | 1 | 43.00 | 0.64 | TENT4B^ENSG00000121274.14 | 2349 | chr16:50154259:+ | RMI2^ENSG00000175643.10 | 30478 | chr16:11379822:+ | ONLY_REF_SPLICE | YES | 94 | 14 | 0.47 | 3.00 | GT | 1.7232 | AG | 1.7968 | 0.1483 | 1411 | 0 |
| TENT4B--RMI2 | 24 | 1 | 24.00 | 0.36 | TENT4B^ENSG00000121274.14 | 2349 | chr16:50154259:+ | RMI2^ENSG00000175643.10 | 28359 | chr16:11350642:+ | ONLY_REF_SPLICE | YES | 94 | 326 | 0.27 | 0.08 | GT | 1.7232 | AG | 1.5656 | 0.0827 | 1146 | 0 |
| TENT4B--RMI2 | 2 | 0 | 2.00 | 0.00 | TENT4B^ENSG00000121274.14 | 1122 | chr16:50153032:+ | RMI2^ENSG00000175643.10 | 28359 | chr16:11350642:+ | ONLY_REF_SPLICE | YES | 40 | 326 | 0.07 | 0.01 | GT | 1.6402 | AG | 1.5656 | 0.0068 | 1146 | 0 |
| ANO2--NOP2 | 37 | 0 | 37.00 | 0.00 | ANO2^ENSG00000047617.15 | 4549 | chr12:5921040:- | NOP2^ENSG00000111641.12 | 54126 | chr12:6557642:- | ONLY_REF_SPLICE | YES | 73 | 216 | 0.51 | 0.18 | GT | 1.6895 | AG | 1.8295 | 0.1257 | 464 | 0 |
| ETV6--AC008014.1 | 36 | 0 | 36.00 | 0.00 | ETV6^ENSG00000139083.11 | 1487 | chr12:11650160:+ | AC008014.1^ENSG00000257261.6 | 31901 | chr12:46874817:+ | ONLY_REF_SPLICE | YES | 2470 | 0 | 0.01 | 37.00 | GT | 1.9329 | AG | 1.9329 | 0.1223 | 474 | 0 |
| ETV6--AC008014.1 | 10 | 0 | 10.00 | 0.00 | ETV6^ENSG00000139083.11 | 1487 | chr12:11650160:+ | AC008014.1^ENSG00000257261.6 | 33659 | chr12:46876575:+ | INCL_NON_REF_SPLICE | YES | 2470 | 0 | 0.00 | 11.00 | GT | 1.9329 | AG | 1.9329 | 0.034 | 1276 | 0 |
| NR6A1--SCAI | 26 | 0 | 26.00 | 0.00 | NR6A1^ENSG00000148200.17 | 4637 | chr9:124554328:- | SCAI^ENSG00000173611.18 | 25602 | chr9:125029739:- | ONLY_REF_SPLICE | YES | 54 | 80 | 0.49 | 0.33 | GT | 1.6895 | AG | 1.8892 | 0.0883 | 5184 | 0 |
| ATG5--AC004083.1 | 19 | 0 | 19.00 | 0.00 | ATG5^ENSG00000057663.16 | 7147 | chr6:106248150:- | AC004083.1^ENSG00000254180.2 | 32445 | chr8:90201050:- | ONLY_REF_SPLICE | YES | 189 | 0 | 0.11 | 20.00 | GT | 1.7056 | AG | 1.2729 | 0.0645 | 1088 | 0 |
| PABPC1L--CCN5 | 16 | 0 | 16.00 | 0.00 | PABPC1L^ENSG00000101104.13 | 16033 | chr20:44938748:+ | CCN5^ENSG00000064205.11 | 28922 | chr20:44727087:+ | ONLY_REF_SPLICE | YES | 1008 | 234 | 0.02 | 0.07 | GT | 1.8892 | AG | 1.9086 | 0.0544 | 323 | 0 |
| PABPC1L--CCN5 | 4 | 0 | 4.00 | 0.00 | PABPC1L^ENSG00000101104.13 | 15476 | chr20:44938191:+ | CCN5^ENSG00000064205.11 | 28922 | chr20:44727087:+ | ONLY_REF_SPLICE | YES | 1443 | 234 | 0.00 | 0.02 | GT | 1.8295 | AG | 1.9086 | 0.0136 | 440 | 0 |
| PABPC1L--CCN5 | 2 | 0 | 2.00 | 0.00 | PABPC1L^ENSG00000101104.13 | 17664 | chr20:44952704:+ | CCN5^ENSG00000064205.11 | 28922 | chr20:44727087:+ | ONLY_REF_SPLICE | YES | 61 | 234 | 0.05 | 0.01 | GT | 1.9219 | AG | 1.9086 | 0.0068 | 1707 | 0 |
| MROH1--AL021392.1 | 15 | 1 | 15.00 | 1.00 | MROH1^ENSG00000179832.17 | 5212 | chr8:144168440:+ | AL021392.1^ENSG00000234869.1 | 43690 | chr22:46546688:+ | ONLY_REF_SPLICE | YES | 1547 | 0 | 0.01 | 17.00 | GT | 1.8256 | AG | 1.7232 | 0.0544 | 927 | 0 |
| SCAMP3--PLD5 | 9 | 0 | 9.00 | 0.00 | SCAMP3^ENSG00000116521.11 | 1345 | chr1:155262086:- | PLD5^ENSG00000180287.17 | 12684 | chr1:242348242:- | ONLY_REF_SPLICE | YES | 944 | 8 | 0.01 | 1.11 | GT | 1.8892 | AG | 1.9329 | 0.0306 | 1140 | 0 |
| SCAMP3--PLD5 | 8 | 0 | 8.00 | 0.00 | SCAMP3^ENSG00000116521.11 | 3101 | chr1:155260330:- | PLD5^ENSG00000180287.17 | 12684 | chr1:242348242:- | ONLY_REF_SPLICE | YES | 323 | 8 | 0.03 | 1.00 | GT | 1.8295 | AG | 1.9329 | 0.0272 | 1590 | 0 |
| SCAMP3--PLD5 | 1 | 0 | 1.00 | 0.00 | SCAMP3^ENSG00000116521.11 | 1774 | chr1:155261657:- | PLD5^ENSG00000180287.17 | 12684 | chr1:242348242:- | ONLY_REF_SPLICE | YES | 716 | 8 | 0.00 | 0.22 | GT | 1.9219 | AG | 1.9329 | 0.0034 | 1018 | 0 |
| SASH1--AL589693.1 | 7 | 0 | 7.00 | 0.00 | SASH1^ENSG00000111961.18 | 4813 | chr6:148440407:+ | AL589693.1^ENSG00000287092.1 | 36579 | chr6:156294754:- | ONLY_REF_SPLICE | YES | 225 | 0 | 0.04 | 8.00 | GT | 1.2310 | AG | 1.9329 | 0.0238 | 2784 | 0 |
32 rows