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1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/starfusion/1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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Workflow Run
dev_rna_exp0016-2cae617
Published
May 16, 2026 9:47 AM

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 358
Pass (CALL=1): 24 (6.7%)
Fail (CALL=0): 334 (93.3%)

Blacklist Flagging:
  Total blacklisted: 112
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 8: 118
  Excluded SpliceType: INCL_NON_REF_SPLICE: 56
  Blacklisted; aih_curated_blacklist score(3): 45
  Blacklisted: 41
  aih_curated_blacklist score(3): 22
  Read count too low: 2 < 8: 12
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 8
  Does not meet inclusion criteria: 5
  Read count too low: 7 < 8: 5
  Read count too low: 6 < 8: 5
  Read count too low: 4 < 8: 5
  Read count too low: 3 < 8: 5
  aih_curated_blacklist score(5): 2
  Read count too low: 5 < 8: 2
  aih_curated_blacklist score(6): 1
  aih_curated_blacklist score(4): 1
  Excluded annotation pattern: HGNC_GENEFAM: 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 168 fail (total: 168)
  ONLY_REF_SPLICE: 24 pass, 166 fail (total: 190)