#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	SpliceType	LeftGene	LeftBreakpoint	RightGene	RightBreakpoint	JunctionReads	SpanningFrags	LargeAnchorSupport	FFPM	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	annots	breakpoint_ID	blacklisted	blacklist_reasons	aih_curated_reason	CALL	filter_reason	FILTER	total_reads
HLA-C--MUC16	173	0	172.98	0.0	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269489:-	MUC16^ENSG00000181143.15	chr19:8848985:-	LH00995:25:23T55JLT4:2:1102:46336:24569,LH00995:25:23T55JLT4:2:1111:28409:19861,LH00995:25:23T55JLT4:2:1114:3459:22887,LH00995:25:23T55JLT4:2:1114:35836:4783,LH00995:25:23T55JLT4:2:1120:14235:17030,LH00995:25:23T55JLT4:2:1121:24833:28800,LH00995:25:23T55JLT4:2:1122:24655:21570,LH00995:25:23T55JLT4:2:1122:45204:26951,LH00995:25:23T55JLT4:2:1124:50058:29529,LH00995:25:23T55JLT4:2:1125:9786:24120,LH00995:25:23T55JLT4:2:1134:50762:10682,LH00995:25:23T55JLT4:2:1139:20092:28324,LH00995:25:23T55JLT4:2:1139:21427:18557,LH00995:25:23T55JLT4:2:1150:48205:18950,LH00995:25:23T55JLT4:2:1153:33481:11860,LH00995:25:23T55JLT4:2:1156:40075:16778,LH00995:25:23T55JLT4:2:1156:50818:19748,LH00995:25:23T55JLT4:2:1159:39751:19440,LH00995:25:23T55JLT4:2:1162:30019:22285,LH00995:25:23T55JLT4:2:1168:34986:28590,LH00995:25:23T55JLT4:2:1170:36046:17478,LH00995:25:23T55JLT4:2:1173:29671:17787,LH00995:25:23T55JLT4:2:1177:25019:18389,LH00995:25:23T55JLT4:2:1191:51668:14690,LH00995:25:23T55JLT4:2:1208:27414:19594,LH00995:25:23T55JLT4:2:1218:2925:9463,LH00995:25:23T55JLT4:2:1219:12213:18487,LH00995:25:23T55JLT4:2:1230:19906:9225,LH00995:25:23T55JLT4:2:1238:23862:16442,LH00995:25:23T55JLT4:2:1241:7302:12728,LH00995:25:23T55JLT4:2:1244:11679:21906,LH00995:25:23T55JLT4:2:1256:25836:5484,LH00995:25:23T55JLT4:2:1256:29372:1911,LH00995:25:23T55JLT4:2:1257:14130:16932,LH00995:25:23T55JLT4:2:1260:35253:16582,LH00995:25:23T55JLT4:2:1263:35552:19174,LH00995:25:23T55JLT4:2:1281:19073:22187,LH00995:25:23T55JLT4:2:1287:10829:17212,LH00995:25:23T55JLT4:2:1293:6574:6423,LH00995:25:23T55JLT4:2:1301:30601:14858,LH00995:25:23T55JLT4:2:1307:2108:24751,LH00995:25:23T55JLT4:2:1315:37826:11902,LH00995:25:23T55JLT4:2:1324:49710:10234,LH00995:25:23T55JLT4:2:1346:2230:2261,LH00995:25:23T55JLT4:2:1363:17924:20954,LH00995:25:23T55JLT4:2:1367:15667:22957,LH00995:25:23T55JLT4:2:1394:44184:16357,LH00995:25:23T55JLT4:2:1404:1938:16385,LH00995:25:23T55JLT4:2:1419:30682:17380,LH00995:25:23T55JLT4:2:1439:3621:25802,LH00995:25:23T55JLT4:2:1440:12900:4573,LH00995:25:23T55JLT4:2:1452:1178:13303,LH00995:25:23T55JLT4:2:1456:37454:21878,LH00995:25:23T55JLT4:2:1484:46344:25059,LH00995:25:23T55JLT4:2:1485:22689:22929,LH00995:25:23T55JLT4:2:1492:41596:2261,LH00995:25:23T55JLT4:2:2106:3387:27329,LH00995:25:23T55JLT4:2:2117:9470:1603,LH00995:25:23T55JLT4:2:2127:23919:22201,LH00995:25:23T55JLT4:2:2147:21152:15251,LH00995:25:23T55JLT4:2:2149:42340:27848,LH00995:25:23T55JLT4:2:2163:33870:25283,LH00995:25:23T55JLT4:2:2166:28919:21360,LH00995:25:23T55JLT4:2:2166:41126:19692,LH00995:25:23T55JLT4:2:2191:33983:20463,LH00995:25:23T55JLT4:2:2226:34840:12252,LH00995:25:23T55JLT4:2:2238:47032:23364,LH00995:25:23T55JLT4:2:2239:17431:17128,LH00995:25:23T55JLT4:2:2241:1235:25115,LH00995:25:23T55JLT4:2:2257:24995:7642,LH00995:25:23T55JLT4:2:2257:38182:24737,LH00995:25:23T55JLT4:2:2265:13661:20939,LH00995:25:23T55JLT4:2:2327:17876:15713,LH00995:25:23T55JLT4:2:2357:43926:12658,LH00995:25:23T55JLT4:2:2357:4948:20001,LH00995:25:23T55JLT4:2:2370:39371:25423,LH00995:25:23T55JLT4:2:2376:46587:25620,LH00995:25:23T55JLT4:2:2393:7148:26642,LH00995:25:23T55JLT4:2:2428:50446:9940,LH00995:25:23T55JLT4:2:2454:51393:24835,LH00995:25:23T55JLT4:5:1105:15271:28016,LH00995:25:23T55JLT4:5:1125:4285:21178,LH00995:25:23T55JLT4:5:1134:6550:17759,LH00995:25:23T55JLT4:5:1145:50365:13779,LH00995:25:23T55JLT4:5:1158:29234:21738,LH00995:25:23T55JLT4:5:1169:48456:10136,LH00995:25:23T55JLT4:5:1211:12852:15222,LH00995:25:23T55JLT4:5:1221:8491:23840,LH00995:25:23T55JLT4:5:1253:11290:23448,LH00995:25:23T55JLT4:5:1266:5320:9211,LH00995:25:23T55JLT4:5:1282:41304:11201,LH00995:25:23T55JLT4:5:1306:11913:14970,LH00995:25:23T55JLT4:5:1344:3459:22551,LH00995:25:23T55JLT4:5:1362:37729:21962,LH00995:25:23T55JLT4:5:1459:28668:4867,LH00995:25:23T55JLT4:5:2102:47566:2878,LH00995:25:23T55JLT4:5:2137:50155:5344,LH00995:25:23T55JLT4:5:2202:22932:6451,LH00995:25:23T55JLT4:5:2236:37502:25998,LH00995:25:23T55JLT4:5:2237:5142:17114,LH00995:25:23T55JLT4:5:2240:49330:10584,LH00995:25:23T55JLT4:5:2248:31046:11902,LH00995:25:23T55JLT4:5:2249:32041:20183,LH00995:25:23T55JLT4:5:2268:39330:14424,LH00995:25:23T55JLT4:5:2373:36135:9590,LH00995:25:23T55JLT4:5:2390:16444:1434,LH00995:25:23T55JLT4:5:2401:32721:19538,LH00995:25:23T55JLT4:5:2402:14810:21752,LH00995:25:23T55JLT4:5:2456:49758:15222,LH00995:25:23T55JLT4:5:2486:37122:21276,LH00995:25:23T55JLT4:5:2490:2302:2752,LH00995:25:23T55JLT4:5:2496:41976:17408,LH00995:25:23T55JLT4:6:1127:48788:19482,LH00995:25:23T55JLT4:6:1162:51821:6044,LH00995:25:23T55JLT4:6:1163:49216:11874,LH00995:25:23T55JLT4:6:1201:40220:24092,LH00995:25:23T55JLT4:6:1225:31459:4853,LH00995:25:23T55JLT4:6:1255:22908:9127,LH00995:25:23T55JLT4:6:1315:44646:13765,LH00995:25:23T55JLT4:6:1324:10028:25493,LH00995:25:23T55JLT4:6:1325:44791:15783,LH00995:25:23T55JLT4:6:1334:40568:10010,LH00995:25:23T55JLT4:6:1340:48424:9099,LH00995:25:23T55JLT4:6:1359:29533:9505,LH00995:25:23T55JLT4:6:1455:42186:25115,LH00995:25:23T55JLT4:6:1462:28611:13821,LH00995:25:23T55JLT4:6:1482:41442:11803,LH00995:25:23T55JLT4:6:1490:29857:7796,LH00995:25:23T55JLT4:6:1498:29703:7137,LH00995:25:23T55JLT4:6:2109:29477:7670,LH00995:25:23T55JLT4:6:2136:27673:15587,LH00995:25:23T55JLT4:6:2150:43602:29753,LH00995:25:23T55JLT4:6:2185:47113:11902,LH00995:25:23T55JLT4:6:2191:16298:13765,LH00995:25:23T55JLT4:6:2243:44710:3312,LH00995:25:23T55JLT4:6:2257:1324:13163,LH00995:25:23T55JLT4:6:2274:7334:14970,LH00995:25:23T55JLT4:6:2285:41612:8931,LH00995:25:23T55JLT4:6:2338:49993:17002,LH00995:25:23T55JLT4:6:2355:33190:17885,LH00995:25:23T55JLT4:6:2368:18555:10024,LH00995:25:23T55JLT4:6:2381:5571:19090,LH00995:25:23T55JLT4:6:2446:9066:18193,LH00995:25:23T55JLT4:6:2447:17851:8384,LH00995:25:23T55JLT4:8:1103:26362:20435,LH00995:25:23T55JLT4:8:1111:30973:23630,LH00995:25:23T55JLT4:8:1115:8637:10304,LH00995:25:23T55JLT4:8:1127:34412:2597,LH00995:25:23T55JLT4:8:1149:2780:29193,LH00995:25:23T55JLT4:8:1159:17269:20687,LH00995:25:23T55JLT4:8:1164:17301:22957,LH00995:25:23T55JLT4:8:1164:46967:22663,LH00995:25:23T55JLT4:8:1165:17099:6157,LH00995:25:23T55JLT4:8:1172:30051:3032,LH00995:25:23T55JLT4:8:1293:51700:9225,LH00995:25:23T55JLT4:8:1305:44840:5946,LH00995:25:23T55JLT4:8:1307:4907:8637,LH00995:25:23T55JLT4:8:1323:2238:8104,LH00995:25:23T55JLT4:8:1359:26176:2541,LH00995:25:23T55JLT4:8:1410:7941:22635,LH00995:25:23T55JLT4:8:1422:46757:2766,LH00995:25:23T55JLT4:8:1434:34727:25984,LH00995:25:23T55JLT4:8:1442:14575:6605,LH00995:25:23T55JLT4:8:2105:18976:27876,LH00995:25:23T55JLT4:8:2131:28004:6549,LH00995:25:23T55JLT4:8:2173:8394:16414,LH00995:25:23T55JLT4:8:2187:39905:8749,LH00995:25:23T55JLT4:8:2188:31378:1518,LH00995:25:23T55JLT4:8:2255:20796:15363,LH00995:25:23T55JLT4:8:2266:33093:13625,LH00995:25:23T55JLT4:8:2313:7423:6633,LH00995:25:23T55JLT4:8:2322:40439:12981,LH00995:25:23T55JLT4:8:2431:29800:3382	.	NO_LDAS	0.5857	GT	1.9656	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:31269489-chr19:8848985	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	173
HLA-A--C12orf40	159	0	157.29	0.0	INCL_NON_REF_SPLICE	HLA-A^ENSG00000206503.13	chr6:29942951:+	C12orf40^ENSG00000180116.15	chr12:39716794:+	LH00995:25:23T55JLT4:2:1103:22390:8903,LH00995:25:23T55JLT4:2:1112:13078:14858,LH00995:25:23T55JLT4:2:1112:25149:22733,LH00995:25:23T55JLT4:2:1112:46280:9758,LH00995:25:23T55JLT4:2:1115:8119:4895,LH00995:25:23T55JLT4:2:1140:20052:7263,LH00995:25:23T55JLT4:2:1145:13216:12546,LH00995:25:23T55JLT4:2:1155:51927:10598,LH00995:25:23T55JLT4:2:1161:26953:5456,LH00995:25:23T55JLT4:2:1164:6606:3004,LH00995:25:23T55JLT4:2:1168:45649:12756,LH00995:25:23T55JLT4:2:1171:37405:23784,LH00995:25:23T55JLT4:2:1205:26022:21668,LH00995:25:23T55JLT4:2:1256:51449:16526,LH00995:25:23T55JLT4:2:1258:46846:20911,LH00995:25:23T55JLT4:2:1262:29938:23238,LH00995:25:23T55JLT4:2:1270:12690:9253,LH00995:25:23T55JLT4:2:1275:21346:9758,LH00995:25:23T55JLT4:2:1279:36677:16918,LH00995:25:23T55JLT4:2:1286:10134:1967,LH00995:25:23T55JLT4:2:1287:13904:15531,LH00995:25:23T55JLT4:2:1289:38845:14676,LH00995:25:23T55JLT4:2:1336:13273:28310,LH00995:25:23T55JLT4:2:1348:28538:25886,LH00995:25:23T55JLT4:2:1353:4778:19118,LH00995:25:23T55JLT4:2:1364:44330:3606,LH00995:25:23T55JLT4:2:1379:20990:23209,LH00995:25:23T55JLT4:2:1413:20683:12084,LH00995:25:23T55JLT4:2:1416:6113:26026,LH00995:25:23T55JLT4:2:1422:22277:11481,LH00995:25:23T55JLT4:2:1426:8977:22018,LH00995:25:23T55JLT4:2:1427:33158:20351,LH00995:25:23T55JLT4:2:1439:11679:26334,LH00995:25:23T55JLT4:2:1445:38740:19790,LH00995:25:23T55JLT4:2:1476:33756:8244,LH00995:25:23T55JLT4:2:2129:22811:23812,LH00995:25:23T55JLT4:2:2129:26508:4601,LH00995:25:23T55JLT4:2:2132:2400:27665,LH00995:25:23T55JLT4:2:2141:39889:25648,LH00995:25:23T55JLT4:2:2242:25351:20477,LH00995:25:23T55JLT4:2:2247:37502:1504,LH00995:25:23T55JLT4:2:2260:18936:20911,LH00995:25:23T55JLT4:2:2262:46021:6423,LH00995:25:23T55JLT4:2:2277:27624:9085,LH00995:25:23T55JLT4:2:2280:14980:20001,LH00995:25:23T55JLT4:2:2293:2036:6689,LH00995:25:23T55JLT4:2:2294:25294:5050,LH00995:25:23T55JLT4:2:2322:30561:5960,LH00995:25:23T55JLT4:2:2339:13580:11131,LH00995:25:23T55JLT4:2:2380:8532:24162,LH00995:25:23T55JLT4:2:2407:7893:10164,LH00995:25:23T55JLT4:2:2450:31014:27035,LH00995:25:23T55JLT4:5:1111:10215:3536,LH00995:25:23T55JLT4:5:1130:51983:11201,LH00995:25:23T55JLT4:5:1143:48610:3957,LH00995:25:23T55JLT4:5:1151:24380:29389,LH00995:25:23T55JLT4:5:1161:25974:10907,LH00995:25:23T55JLT4:5:1187:24243:10767,LH00995:25:23T55JLT4:5:1187:7464:29431,LH00995:25:23T55JLT4:5:1210:24315:18599,LH00995:25:23T55JLT4:5:1264:17609:29123,LH00995:25:23T55JLT4:5:1275:1858:11874,LH00995:25:23T55JLT4:5:1285:25828:23238,LH00995:25:23T55JLT4:5:1293:17843:1280,LH00995:25:23T55JLT4:5:1314:25319:27988,LH00995:25:23T55JLT4:5:1323:19898:27203,LH00995:25:23T55JLT4:5:1326:45390:6927,LH00995:25:23T55JLT4:5:1332:45414:8314,LH00995:25:23T55JLT4:5:1363:24332:6269,LH00995:25:23T55JLT4:5:1402:40787:29221,LH00995:25:23T55JLT4:5:1408:50211:17717,LH00995:25:23T55JLT4:5:1409:7788:18641,LH00995:25:23T55JLT4:5:1413:29776:19622,LH00995:25:23T55JLT4:5:1447:6259:12462,LH00995:25:23T55JLT4:5:1456:42639:18249,LH00995:25:23T55JLT4:5:1495:24890:20379,LH00995:25:23T55JLT4:5:2101:6170:14158,LH00995:25:23T55JLT4:5:2111:6720:10682,LH00995:25:23T55JLT4:5:2143:51045:9772,LH00995:25:23T55JLT4:5:2187:42308:16133,LH00995:25:23T55JLT4:5:2189:6558:21864,LH00995:25:23T55JLT4:5:2221:37057:13989,LH00995:25:23T55JLT4:5:2292:4212:4657,LH00995:25:23T55JLT4:5:2302:19542:23336,LH00995:25:23T55JLT4:5:2333:8661:3144,LH00995:25:23T55JLT4:5:2349:26435:9856,LH00995:25:23T55JLT4:5:2381:42397:15391,LH00995:25:23T55JLT4:5:2395:14874:27637,LH00995:25:23T55JLT4:5:2437:18628:21808,LH00995:25:23T55JLT4:5:2456:38416:26713,LH00995:25:23T55JLT4:5:2467:8952:16568,LH00995:25:23T55JLT4:6:1107:15918:12182,LH00995:25:23T55JLT4:6:1107:20359:25255,LH00995:25:23T55JLT4:6:1130:10490:19118,LH00995:25:23T55JLT4:6:1136:45722:3270,LH00995:25:23T55JLT4:6:1147:25383:24989,LH00995:25:23T55JLT4:6:1150:11088:14830,LH00995:25:23T55JLT4:6:1162:1477:18137,LH00995:25:23T55JLT4:6:1176:9931:28856,LH00995:25:23T55JLT4:6:1183:28037:11621,LH00995:25:23T55JLT4:6:1188:36968:28268,LH00995:25:23T55JLT4:6:1198:43019:1869,LH00995:25:23T55JLT4:6:1268:36701:3760,LH00995:25:23T55JLT4:6:1295:27349:15138,LH00995:25:23T55JLT4:6:1318:11549:25550,LH00995:25:23T55JLT4:6:1334:30027:28100,LH00995:25:23T55JLT4:6:1389:50025:19076,LH00995:25:23T55JLT4:6:1414:42130:24905,LH00995:25:23T55JLT4:6:1459:7019:3046,LH00995:25:23T55JLT4:6:1464:16420:12434,LH00995:25:23T55JLT4:6:1486:19348:2625,LH00995:25:23T55JLT4:6:1491:41466:5008,LH00995:25:23T55JLT4:6:2105:47315:27049,LH00995:25:23T55JLT4:6:2106:29453:19566,LH00995:25:23T55JLT4:6:2107:7003:12910,LH00995:25:23T55JLT4:6:2108:4074:24681,LH00995:25:23T55JLT4:6:2165:36701:4293,LH00995:25:23T55JLT4:6:2178:6833:19090,LH00995:25:23T55JLT4:6:2183:24728:2527,LH00995:25:23T55JLT4:6:2186:46207:15461,LH00995:25:23T55JLT4:6:2189:24542:3971,LH00995:25:23T55JLT4:6:2214:17439:11537,LH00995:25:23T55JLT4:6:2277:25966:5456,LH00995:25:23T55JLT4:6:2292:15538:26965,LH00995:25:23T55JLT4:6:2326:16800:29375,LH00995:25:23T55JLT4:6:2365:2214:12182,LH00995:25:23T55JLT4:6:2427:50365:8763,LH00995:25:23T55JLT4:6:2430:42833:9197,LH00995:25:23T55JLT4:6:2437:24291:6171,LH00995:25:23T55JLT4:6:2471:34824:14830,LH00995:25:23T55JLT4:6:2477:23806:26797,LH00995:25:23T55JLT4:8:1129:27802:27581,LH00995:25:23T55JLT4:8:1189:33570:28884,LH00995:25:23T55JLT4:8:1203:32721:5806,LH00995:25:23T55JLT4:8:1259:45333:24485,LH00995:25:23T55JLT4:8:1318:11428:23266,LH00995:25:23T55JLT4:8:1389:51983:14732,LH00995:25:23T55JLT4:8:1406:1178:6325,LH00995:25:23T55JLT4:8:1410:11792:6633,LH00995:25:23T55JLT4:8:1421:23644:20659,LH00995:25:23T55JLT4:8:1430:24582:28898,LH00995:25:23T55JLT4:8:1436:9907:14354,LH00995:25:23T55JLT4:8:2138:45333:6185,LH00995:25:23T55JLT4:8:2155:41434:5008,LH00995:25:23T55JLT4:8:2157:15400:10781,LH00995:25:23T55JLT4:8:2157:28538:19664,LH00995:25:23T55JLT4:8:2272:16735:22957,LH00995:25:23T55JLT4:8:2282:49435:1715,LH00995:25:23T55JLT4:8:2304:38513:16400,LH00995:25:23T55JLT4:8:2312:40876:13793,LH00995:25:23T55JLT4:8:2342:9559:19048,LH00995:25:23T55JLT4:8:2351:39913:10753,LH00995:25:23T55JLT4:8:2369:7440:8314,LH00995:25:23T55JLT4:8:2415:20125:20169,LH00995:25:23T55JLT4:8:2422:13604:7278,LH00995:25:23T55JLT4:8:2433:21589:7263,LH00995:25:23T55JLT4:8:2437:41588:2023,LH00995:25:23T55JLT4:8:2465:14721:2065,LH00995:25:23T55JLT4:8:2474:27082:20813	.	YES_LDAS	0.5326	AT	1.5656	AC	1.7056	"[""INTERCHROMOSOMAL[chr6--chr12]""]"	chr6:29942951-chr12:39716794	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	159
HLA-C--NUMA1	128	0	128.0	0.0	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269493:-	NUMA1^ENSG00000137497.18	chr11:72013673:-	LH00995:25:23T55JLT4:2:1101:25448:2317,LH00995:25:23T55JLT4:2:1106:31936:19748,LH00995:25:23T55JLT4:2:1108:27608:25816,LH00995:25:23T55JLT4:2:1125:37421:24877,LH00995:25:23T55JLT4:2:1133:1607:2135,LH00995:25:23T55JLT4:2:1138:6501:10416,LH00995:25:23T55JLT4:2:1158:7334:17520,LH00995:25:23T55JLT4:2:1187:30367:6717,LH00995:25:23T55JLT4:2:1196:2125:13121,LH00995:25:23T55JLT4:2:1202:2594:4713,LH00995:25:23T55JLT4:2:1209:14373:24078,LH00995:25:23T55JLT4:2:1225:43561:12420,LH00995:25:23T55JLT4:2:1241:42939:2766,LH00995:25:23T55JLT4:2:1254:42987:12910,LH00995:25:23T55JLT4:2:1288:21565:24092,LH00995:25:23T55JLT4:2:1311:23846:20813,LH00995:25:23T55JLT4:2:1328:10821:20645,LH00995:25:23T55JLT4:2:1328:24817:16610,LH00995:25:23T55JLT4:2:1362:38594:26068,LH00995:25:23T55JLT4:2:1391:27907:22775,LH00995:25:23T55JLT4:2:1398:7415:1238,LH00995:25:23T55JLT4:2:1410:21500:2569,LH00995:25:23T55JLT4:2:1428:36458:20183,LH00995:25:23T55JLT4:2:1438:27754:8076,LH00995:25:23T55JLT4:2:1451:45066:4321,LH00995:25:23T55JLT4:2:1455:38295:19692,LH00995:25:23T55JLT4:2:1491:27220:25760,LH00995:25:23T55JLT4:2:1498:35965:22999,LH00995:25:23T55JLT4:2:2102:28409:1280,LH00995:25:23T55JLT4:2:2105:24857:20911,LH00995:25:23T55JLT4:2:2110:17544:25676,LH00995:25:23T55JLT4:2:2111:10004:20127,LH00995:25:23T55JLT4:2:2140:16460:7151,LH00995:25:23T55JLT4:2:2154:28328:24008,LH00995:25:23T55JLT4:2:2169:29679:21836,LH00995:25:23T55JLT4:2:2184:11614:20085,LH00995:25:23T55JLT4:2:2204:42057:20659,LH00995:25:23T55JLT4:2:2232:12892:25045,LH00995:25:23T55JLT4:2:2234:44193:20771,LH00995:25:23T55JLT4:2:2268:38449:29683,LH00995:25:23T55JLT4:2:2268:4390:15251,LH00995:25:23T55JLT4:2:2275:3508:9183,LH00995:25:23T55JLT4:2:2290:46320:28548,LH00995:25:23T55JLT4:2:2298:34185:24709,LH00995:25:23T55JLT4:2:2312:13402:5022,LH00995:25:23T55JLT4:2:2316:28676:29627,LH00995:25:23T55JLT4:2:2333:31969:24737,LH00995:25:23T55JLT4:2:2353:2925:5232,LH00995:25:23T55JLT4:2:2368:25674:21514,LH00995:25:23T55JLT4:2:2421:8637:4531,LH00995:25:23T55JLT4:2:2442:24024:25634,LH00995:25:23T55JLT4:2:2465:11363:9421,LH00995:25:23T55JLT4:5:1166:37122:15138,LH00995:25:23T55JLT4:5:1185:44637:19496,LH00995:25:23T55JLT4:5:1205:37809:18908,LH00995:25:23T55JLT4:5:1229:23523:15349,LH00995:25:23T55JLT4:5:1285:17285:8104,LH00995:25:23T55JLT4:5:1358:19745:11299,LH00995:25:23T55JLT4:5:1376:6679:1392,LH00995:25:23T55JLT4:5:1378:24113:7600,LH00995:25:23T55JLT4:5:1396:39266:28184,LH00995:25:23T55JLT4:5:1442:27001:12350,LH00995:25:23T55JLT4:5:1471:5878:27273,LH00995:25:23T55JLT4:5:1494:30035:1659,LH00995:25:23T55JLT4:5:2208:17075:14830,LH00995:25:23T55JLT4:5:2217:39169:15993,LH00995:25:23T55JLT4:5:2220:10206:20337,LH00995:25:23T55JLT4:5:2229:20173:24373,LH00995:25:23T55JLT4:5:2234:42728:23027,LH00995:25:23T55JLT4:5:2241:33708:28002,LH00995:25:23T55JLT4:5:2242:29550:25788,LH00995:25:23T55JLT4:5:2264:35755:1196,LH00995:25:23T55JLT4:5:2266:25149:6086,LH00995:25:23T55JLT4:5:2277:36976:25479,LH00995:25:23T55JLT4:5:2297:43375:15012,LH00995:25:23T55JLT4:5:2348:40156:27399,LH00995:25:23T55JLT4:5:2354:25189:16890,LH00995:25:23T55JLT4:5:2367:20796:15279,LH00995:25:23T55JLT4:5:2374:5336:26026,LH00995:25:23T55JLT4:5:2456:7148:2177,LH00995:25:23T55JLT4:5:2458:3443:4475,LH00995:25:23T55JLT4:6:1109:28401:3564,LH00995:25:23T55JLT4:6:1136:8669:18712,LH00995:25:23T55JLT4:6:1148:17827:28184,LH00995:25:23T55JLT4:6:1154:9656:21654,LH00995:25:23T55JLT4:6:1167:20327:28814,LH00995:25:23T55JLT4:6:1213:41329:24022,LH00995:25:23T55JLT4:6:1226:23498:13625,LH00995:25:23T55JLT4:6:1265:39913:25886,LH00995:25:23T55JLT4:6:1349:13273:24302,LH00995:25:23T55JLT4:6:1352:40835:1673,LH00995:25:23T55JLT4:6:1378:4996:23336,LH00995:25:23T55JLT4:6:1396:9397:11705,LH00995:25:23T55JLT4:6:1397:25674:1196,LH00995:25:23T55JLT4:6:1420:43901:27553,LH00995:25:23T55JLT4:6:1448:35520:15166,LH00995:25:23T55JLT4:6:1459:23968:29039,LH00995:25:23T55JLT4:6:1462:45624:19356,LH00995:25:23T55JLT4:6:1468:12140:15419,LH00995:25:23T55JLT4:6:2113:15344:3256,LH00995:25:23T55JLT4:6:2146:49734:1729,LH00995:25:23T55JLT4:6:2203:13677:9141,LH00995:25:23T55JLT4:6:2256:47598:5484,LH00995:25:23T55JLT4:6:2271:47550:13863,LH00995:25:23T55JLT4:6:2289:23951:6002,LH00995:25:23T55JLT4:6:2350:30488:18838,LH00995:25:23T55JLT4:6:2350:47558:6787,LH00995:25:23T55JLT4:6:2381:9462:16189,LH00995:25:23T55JLT4:6:2389:23919:3032,LH00995:25:23T55JLT4:6:2394:44435:2752,LH00995:25:23T55JLT4:6:2455:25440:26404,LH00995:25:23T55JLT4:6:2468:5239:29445,LH00995:25:23T55JLT4:8:1193:20384:22943,LH00995:25:23T55JLT4:8:1239:5676:25073,LH00995:25:23T55JLT4:8:1344:49451:9618,LH00995:25:23T55JLT4:8:1419:25521:19594,LH00995:25:23T55JLT4:8:1424:19445:2934,LH00995:25:23T55JLT4:8:1445:29574:8230,LH00995:25:23T55JLT4:8:2126:38772:9646,LH00995:25:23T55JLT4:8:2132:38093:9169,LH00995:25:23T55JLT4:8:2346:1097:15433,LH00995:25:23T55JLT4:8:2353:4285:23672,LH00995:25:23T55JLT4:8:2358:16622:19790,LH00995:25:23T55JLT4:8:2379:11679:2289,LH00995:25:23T55JLT4:8:2386:33247:2934,LH00995:25:23T55JLT4:8:2388:50624:24260,LH00995:25:23T55JLT4:8:2423:43052:8483,LH00995:25:23T55JLT4:8:2471:23021:21654	.	NO_LDAS	0.4334	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr6--chr11]""]"	chr6:31269493-chr11:72013673	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	128
AC092807.3--DDAH1	91	0	91.0	0.0	ONLY_REF_SPLICE	AC092807.3^ENSG00000282057.1	chr1:85577984:-	DDAH1^ENSG00000153904.21	chr1:85358847:-	LH00995:25:23T55JLT4:2:1102:4293:24274,LH00995:25:23T55JLT4:2:1121:29469:27021,LH00995:25:23T55JLT4:2:1123:14251:19384,LH00995:25:23T55JLT4:2:1123:32761:14059,LH00995:25:23T55JLT4:2:1148:33465:8272,LH00995:25:23T55JLT4:2:1169:12682:2597,LH00995:25:23T55JLT4:2:1236:24243:20071,LH00995:25:23T55JLT4:2:1238:51061:20533,LH00995:25:23T55JLT4:2:1281:6752:26124,LH00995:25:23T55JLT4:2:1286:22786:25115,LH00995:25:23T55JLT4:2:1292:4875:2976,LH00995:25:23T55JLT4:2:1361:47615:18768,LH00995:25:23T55JLT4:2:1361:51838:10977,LH00995:25:23T55JLT4:2:1368:38416:2780,LH00995:25:23T55JLT4:2:1380:38691:3620,LH00995:25:23T55JLT4:2:1464:38724:14550,LH00995:25:23T55JLT4:2:2156:27365:14746,LH00995:25:23T55JLT4:2:2221:28927:1589,LH00995:25:23T55JLT4:2:2224:18774:2667,LH00995:25:23T55JLT4:2:2235:6218:9646,LH00995:25:23T55JLT4:2:2312:32203:26769,LH00995:25:23T55JLT4:2:2340:28886:7824,LH00995:25:23T55JLT4:2:2372:20238:28324,LH00995:25:23T55JLT4:2:2417:33174:10598,LH00995:25:23T55JLT4:2:2456:45997:21514,LH00995:25:23T55JLT4:2:2470:12197:18151,LH00995:25:23T55JLT4:5:1178:11444:26348,LH00995:25:23T55JLT4:5:1184:10037:11719,LH00995:25:23T55JLT4:5:1258:31596:6297,LH00995:25:23T55JLT4:5:1260:39549:1210,LH00995:25:23T55JLT4:5:1273:25189:5792,LH00995:25:23T55JLT4:5:1302:48238:10262,LH00995:25:23T55JLT4:5:1330:14340:9646,LH00995:25:23T55JLT4:5:1331:38651:22103,LH00995:25:23T55JLT4:5:1369:20254:17871,LH00995:25:23T55JLT4:5:1403:38934:6675,LH00995:25:23T55JLT4:5:1438:27640:13037,LH00995:25:23T55JLT4:5:1440:25221:6128,LH00995:25:23T55JLT4:5:1449:3872:19314,LH00995:25:23T55JLT4:5:1469:21654:10767,LH00995:25:23T55JLT4:5:1471:47606:25928,LH00995:25:23T55JLT4:5:2132:43335:25143,LH00995:25:23T55JLT4:5:2145:24777:13373,LH00995:25:23T55JLT4:5:2196:6453:19300,LH00995:25:23T55JLT4:5:2241:18571:7249,LH00995:25:23T55JLT4:5:2261:13847:27399,LH00995:25:23T55JLT4:5:2312:5870:25017,LH00995:25:23T55JLT4:5:2385:9017:29459,LH00995:25:23T55JLT4:5:2448:38691:18417,LH00995:25:23T55JLT4:5:2458:36256:8511,LH00995:25:23T55JLT4:5:2472:8249:24821,LH00995:25:23T55JLT4:6:1182:15052:24947,LH00995:25:23T55JLT4:6:1228:25852:26642,LH00995:25:23T55JLT4:6:1228:7812:9295,LH00995:25:23T55JLT4:6:1229:18725:25171,LH00995:25:23T55JLT4:6:1235:6525:10290,LH00995:25:23T55JLT4:6:1262:38384:22957,LH00995:25:23T55JLT4:6:1292:39630:10038,LH00995:25:23T55JLT4:6:1320:6687:5806,LH00995:25:23T55JLT4:6:1338:19882:13443,LH00995:25:23T55JLT4:6:1350:39306:19090,LH00995:25:23T55JLT4:6:1398:21330:1154,LH00995:25:23T55JLT4:6:1473:49451:3088,LH00995:25:23T55JLT4:6:2154:8613:5330,LH00995:25:23T55JLT4:6:2297:30553:16203,LH00995:25:23T55JLT4:6:2349:32324:5008,LH00995:25:23T55JLT4:6:2388:34290:15839,LH00995:25:23T55JLT4:6:2434:26459:1350,LH00995:25:23T55JLT4:6:2453:14713:19370,LH00995:25:23T55JLT4:6:2480:40916:13891,LH00995:25:23T55JLT4:8:1115:29347:28716,LH00995:25:23T55JLT4:8:1202:20707:5596,LH00995:25:23T55JLT4:8:1248:17633:3522,LH00995:25:23T55JLT4:8:1249:15975:20855,LH00995:25:23T55JLT4:8:1254:9155:5372,LH00995:25:23T55JLT4:8:1257:44702:9547,LH00995:25:23T55JLT4:8:1272:37170:18726,LH00995:25:23T55JLT4:8:1304:47170:6815,LH00995:25:23T55JLT4:8:1346:22099:5288,LH00995:25:23T55JLT4:8:1350:50899:1448,LH00995:25:23T55JLT4:8:1440:23539:29361,LH00995:25:23T55JLT4:8:1451:22180:23868,LH00995:25:23T55JLT4:8:1463:36475:3200,LH00995:25:23T55JLT4:8:2123:37737:9758,LH00995:25:23T55JLT4:8:2159:21233:18978,LH00995:25:23T55JLT4:8:2167:20343:3172,LH00995:25:23T55JLT4:8:2208:5992:2724,LH00995:25:23T55JLT4:8:2223:29477:7109,LH00995:25:23T55JLT4:8:2334:12464:7516,LH00995:25:23T55JLT4:8:2374:24461:25017,LH00995:25:23T55JLT4:8:2446:14049:26460	.	YES_LDAS	0.3081	GT	1.8062	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[17122]""]"	chr1:85577984-chr1:85358847	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	91
MTAP--CDKN2B-AS1	77	2	77.0	2.0	ONLY_REF_SPLICE	MTAP^ENSG00000099810.21	chr9:21838010:+	CDKN2B-AS1^ENSG00000240498.9	chr9:22112320:+	LH00995:25:23T55JLT4:2:1124:48585:18599,LH00995:25:23T55JLT4:2:1152:22042:14830,LH00995:25:23T55JLT4:2:1175:7860:24008,LH00995:25:23T55JLT4:2:1179:30682:5274,LH00995:25:23T55JLT4:2:1191:14171:12630,LH00995:25:23T55JLT4:2:1197:48448:23125,LH00995:25:23T55JLT4:2:1228:49111:5190,LH00995:25:23T55JLT4:2:1282:49491:18123,LH00995:25:23T55JLT4:2:1304:48189:8441,LH00995:25:23T55JLT4:2:1331:49653:5596,LH00995:25:23T55JLT4:2:1337:33182:3915,LH00995:25:23T55JLT4:2:1414:19987:23125,LH00995:25:23T55JLT4:2:1444:6542:20267,LH00995:25:23T55JLT4:2:1447:32745:6829,LH00995:25:23T55JLT4:2:1475:40406:18473,LH00995:25:23T55JLT4:2:1476:50203:2233,LH00995:25:23T55JLT4:2:1478:11137:5806,LH00995:25:23T55JLT4:2:1478:40973:16371,LH00995:25:23T55JLT4:2:1491:51902:14172,LH00995:25:23T55JLT4:2:2106:32365:6647,LH00995:25:23T55JLT4:2:2126:26208:1420,LH00995:25:23T55JLT4:2:2153:6364:26264,LH00995:25:23T55JLT4:2:2172:2181:13947,LH00995:25:23T55JLT4:2:2239:14033:5974,LH00995:25:23T55JLT4:2:2286:14381:13807,LH00995:25:23T55JLT4:2:2321:40657:4111,LH00995:25:23T55JLT4:2:2362:45900:12378,LH00995:25:23T55JLT4:2:2368:5603:21500,LH00995:25:23T55JLT4:2:2423:26864:21892,LH00995:25:23T55JLT4:5:1150:45066:9842,LH00995:25:23T55JLT4:5:1248:19583:6339,LH00995:25:23T55JLT4:5:1270:9705:25157,LH00995:25:23T55JLT4:5:1292:24121:17871,LH00995:25:23T55JLT4:5:1298:9276:22397,LH00995:25:23T55JLT4:5:1337:42008:23266,LH00995:25:23T55JLT4:5:1339:20133:5806,LH00995:25:23T55JLT4:5:1349:1316:26965,LH00995:25:23T55JLT4:5:1403:45341:10514,LH00995:25:23T55JLT4:5:1414:10805:11453,LH00995:25:23T55JLT4:5:1438:18790:6002,LH00995:25:23T55JLT4:5:2143:45333:20533,LH00995:25:23T55JLT4:5:2207:39128:20323,LH00995:25:23T55JLT4:5:2211:16549:9127,LH00995:25:23T55JLT4:5:2283:3556:3214,LH00995:25:23T55JLT4:5:2374:51393:12196,LH00995:25:23T55JLT4:5:2470:42437:29697,LH00995:25:23T55JLT4:6:1103:14340:18137,LH00995:25:23T55JLT4:6:1108:31580:18936,LH00995:25:23T55JLT4:6:1112:43869:24891,LH00995:25:23T55JLT4:6:1156:11072:26068,LH00995:25:23T55JLT4:6:1162:51482:25578,LH00995:25:23T55JLT4:6:1295:50721:6829,LH00995:25:23T55JLT4:6:1350:5401:20477,LH00995:25:23T55JLT4:6:2180:10813:19959,LH00995:25:23T55JLT4:6:2184:42979:1294,LH00995:25:23T55JLT4:6:2296:41515:5568,LH00995:25:23T55JLT4:6:2323:45204:20505,LH00995:25:23T55JLT4:6:2332:19542:29389,LH00995:25:23T55JLT4:6:2421:38538:6577,LH00995:25:23T55JLT4:6:2426:26807:3550,LH00995:25:23T55JLT4:8:1139:50616:19258,LH00995:25:23T55JLT4:8:1238:1259:26278,LH00995:25:23T55JLT4:8:1317:19672:25045,LH00995:25:23T55JLT4:8:1371:47784:29459,LH00995:25:23T55JLT4:8:1446:3168:14592,LH00995:25:23T55JLT4:8:2126:10150:1546,LH00995:25:23T55JLT4:8:2147:43206:24667,LH00995:25:23T55JLT4:8:2150:50106:4223,LH00995:25:23T55JLT4:8:2214:30925:3480,LH00995:25:23T55JLT4:8:2270:40018:15531,LH00995:25:23T55JLT4:8:2308:47113:14928,LH00995:25:23T55JLT4:8:2318:15522:16848,LH00995:25:23T55JLT4:8:2409:15813:13485,LH00995:25:23T55JLT4:8:2409:51627:24008,LH00995:25:23T55JLT4:8:2415:50268:14900,LH00995:25:23T55JLT4:8:2473:51101:23041,LH00995:25:23T55JLT4:8:2477:7610:8609	LH00995:25:23T55JLT4:2:1267:30909:19006,LH00995:25:23T55JLT4:6:1271:7699:24036	YES_LDAS	0.2675	GT	1.5301	AG	1.8323	"[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr9:0.06Mb]"",""NEIGHBORS[56488]""]"	chr9:21838010-chr9:22112320	False			1		PASS	79
LEPROT--LEPR	72	0	72.0	0.0	ONLY_REF_SPLICE	LEPROT^ENSG00000213625.9	chr1:65425378:+	LEPR^ENSG00000116678.20	chr1:65565546:+	LH00995:25:23T55JLT4:2:1121:46304:12630,LH00995:25:23T55JLT4:2:1179:19639:23840,LH00995:25:23T55JLT4:2:1242:21314:17268,LH00995:25:23T55JLT4:2:1259:44330:13443,LH00995:25:23T55JLT4:2:1306:20732:10122,LH00995:25:23T55JLT4:2:1340:45131:9814,LH00995:25:23T55JLT4:2:1342:44953:2163,LH00995:25:23T55JLT4:2:1382:43359:7474,LH00995:25:23T55JLT4:2:1427:1105:21864,LH00995:25:23T55JLT4:2:1461:34986:25143,LH00995:25:23T55JLT4:2:1476:39557:17366,LH00995:25:23T55JLT4:2:2174:11104:24050,LH00995:25:23T55JLT4:2:2184:4818:3438,LH00995:25:23T55JLT4:2:2187:43699:22074,LH00995:25:23T55JLT4:2:2196:31030:1729,LH00995:25:23T55JLT4:2:2209:35560:1112,LH00995:25:23T55JLT4:2:2221:22981:21668,LH00995:25:23T55JLT4:2:2273:12868:15951,LH00995:25:23T55JLT4:2:2276:48820:23013,LH00995:25:23T55JLT4:2:2295:24040:28884,LH00995:25:23T55JLT4:2:2303:24817:25858,LH00995:25:23T55JLT4:2:2324:18143:3648,LH00995:25:23T55JLT4:2:2393:42542:26292,LH00995:25:23T55JLT4:5:1109:37979:25507,LH00995:25:23T55JLT4:5:1138:4818:26642,LH00995:25:23T55JLT4:5:1203:29032:5526,LH00995:25:23T55JLT4:5:1278:22738:27469,LH00995:25:23T55JLT4:5:1302:30529:13751,LH00995:25:23T55JLT4:5:1371:12973:25493,LH00995:25:23T55JLT4:5:1410:22867:2191,LH00995:25:23T55JLT4:5:2114:4357:8132,LH00995:25:23T55JLT4:5:2117:38918:10458,LH00995:25:23T55JLT4:5:2138:16177:14256,LH00995:25:23T55JLT4:5:2201:28919:9421,LH00995:25:23T55JLT4:5:2203:2246:13499,LH00995:25:23T55JLT4:5:2296:26200:27862,LH00995:25:23T55JLT4:5:2301:43731:2401,LH00995:25:23T55JLT4:5:2350:40059:26474,LH00995:25:23T55JLT4:5:2401:25901:28716,LH00995:25:23T55JLT4:6:1185:6016:8735,LH00995:25:23T55JLT4:6:1412:17358:2513,LH00995:25:23T55JLT4:6:1466:37543:13065,LH00995:25:23T55JLT4:6:1480:17326:14172,LH00995:25:23T55JLT4:6:2102:38044:8665,LH00995:25:23T55JLT4:6:2128:25327:11607,LH00995:25:23T55JLT4:6:2129:6048:6016,LH00995:25:23T55JLT4:6:2153:18758:3732,LH00995:25:23T55JLT4:6:2276:49200:12322,LH00995:25:23T55JLT4:6:2284:18709:9842,LH00995:25:23T55JLT4:6:2305:23628:1939,LH00995:25:23T55JLT4:6:2363:45002:12784,LH00995:25:23T55JLT4:6:2431:7464:10991,LH00995:25:23T55JLT4:8:1108:45309:16203,LH00995:25:23T55JLT4:8:1279:16864:15279,LH00995:25:23T55JLT4:8:1297:48545:25227,LH00995:25:23T55JLT4:8:1311:17649:19608,LH00995:25:23T55JLT4:8:1351:46878:6199,LH00995:25:23T55JLT4:8:1385:22115:21934,LH00995:25:23T55JLT4:8:1410:2578:29515,LH00995:25:23T55JLT4:8:1410:34994:17927,LH00995:25:23T55JLT4:8:1436:43926:7053,LH00995:25:23T55JLT4:8:1470:13208:1883,LH00995:25:23T55JLT4:8:1470:6032:23784,LH00995:25:23T55JLT4:8:1491:26977:16568,LH00995:25:23T55JLT4:8:2156:47995:21080,LH00995:25:23T55JLT4:8:2184:41668:23630,LH00995:25:23T55JLT4:8:2224:15497:8735,LH00995:25:23T55JLT4:8:2231:47162:29165,LH00995:25:23T55JLT4:8:2267:41442:17268,LH00995:25:23T55JLT4:8:2327:21848:11355,LH00995:25:23T55JLT4:8:2374:24412:10276,LH00995:25:23T55JLT4:8:2456:17374:18543	.	YES_LDAS	0.2438	GT	1.8256	AG	1.9219	"[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]"	chr1:65425378-chr1:65565546	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	72
ABLIM3--PTPRB	59	0	59.0	0.0	INCL_NON_REF_SPLICE	ABLIM3^ENSG00000173210.20	chr5:149251419:+	PTPRB^ENSG00000127329.16	chr12:70558894:-	LH00995:25:23T55JLT4:2:1126:10077:25129,LH00995:25:23T55JLT4:2:1160:49807:25479,LH00995:25:23T55JLT4:2:1206:21621:20127,LH00995:25:23T55JLT4:2:1208:30561:14396,LH00995:25:23T55JLT4:2:1223:21678:15573,LH00995:25:23T55JLT4:2:1281:15489:17128,LH00995:25:23T55JLT4:2:1304:33870:2471,LH00995:25:23T55JLT4:2:1431:31629:7726,LH00995:25:23T55JLT4:2:2109:3160:26460,LH00995:25:23T55JLT4:2:2216:30504:14886,LH00995:25:23T55JLT4:2:2249:17617:4811,LH00995:25:23T55JLT4:2:2260:7407:7053,LH00995:25:23T55JLT4:2:2266:5773:2681,LH00995:25:23T55JLT4:2:2278:9462:8931,LH00995:25:23T55JLT4:2:2379:9106:18039,LH00995:25:23T55JLT4:2:2424:52048:23083,LH00995:25:23T55JLT4:2:2431:7456:13947,LH00995:25:23T55JLT4:2:2464:24849:18403,LH00995:25:23T55JLT4:5:1149:13046:6983,LH00995:25:23T55JLT4:5:1196:28676:24330,LH00995:25:23T55JLT4:5:1207:10837:9744,LH00995:25:23T55JLT4:5:1213:41046:25522,LH00995:25:23T55JLT4:5:1304:47485:11761,LH00995:25:23T55JLT4:5:1352:43675:19819,LH00995:25:23T55JLT4:5:1390:33781:5736,LH00995:25:23T55JLT4:5:1410:14389:8328,LH00995:25:23T55JLT4:5:1439:15926:8188,LH00995:25:23T55JLT4:5:2273:41790:29501,LH00995:25:23T55JLT4:5:2340:36636:25507,LH00995:25:23T55JLT4:5:2413:46531:10781,LH00995:25:23T55JLT4:5:2454:40309:8384,LH00995:25:23T55JLT4:6:1145:27576:21948,LH00995:25:23T55JLT4:6:1161:51878:23602,LH00995:25:23T55JLT4:6:1188:12399:12700,LH00995:25:23T55JLT4:6:1232:30221:9604,LH00995:25:23T55JLT4:6:1247:10069:13149,LH00995:25:23T55JLT4:6:1295:16363:1939,LH00995:25:23T55JLT4:6:1295:37648:5344,LH00995:25:23T55JLT4:6:1296:6072:13569,LH00995:25:23T55JLT4:6:1374:11242:12322,LH00995:25:23T55JLT4:6:2111:42008:29599,LH00995:25:23T55JLT4:6:2138:46013:18123,LH00995:25:23T55JLT4:6:2182:10295:18193,LH00995:25:23T55JLT4:6:2226:18118:24036,LH00995:25:23T55JLT4:6:2288:31451:17142,LH00995:25:23T55JLT4:6:2330:3856:28702,LH00995:25:23T55JLT4:6:2407:22050:4447,LH00995:25:23T55JLT4:6:2427:17131:28520,LH00995:25:23T55JLT4:6:2455:13952:28478,LH00995:25:23T55JLT4:6:2470:10935:27147,LH00995:25:23T55JLT4:6:2492:17908:11201,LH00995:25:23T55JLT4:6:2493:42502:8398,LH00995:25:23T55JLT4:6:2496:42647:25550,LH00995:25:23T55JLT4:8:1132:12706:2415,LH00995:25:23T55JLT4:8:1144:20837:21570,LH00995:25:23T55JLT4:8:1284:32033:5848,LH00995:25:23T55JLT4:8:2317:3273:16792,LH00995:25:23T55JLT4:8:2409:9915:18347,LH00995:25:23T55JLT4:8:2484:15133:28842	.	NO_LDAS	0.1998	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr12]""]"	chr5:149251419-chr12:70558894	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	59
COL8A1--CMSS1	57	0	57.0	0.0	INCL_NON_REF_SPLICE	COL8A1^ENSG00000144810.16	chr3:99794382:+	CMSS1^ENSG00000184220.12	chr3:100146973:+	LH00995:25:23T55JLT4:2:1201:43739:19202,LH00995:25:23T55JLT4:2:1302:32786:13373,LH00995:25:23T55JLT4:2:1437:11274:17591,LH00995:25:23T55JLT4:2:2136:21055:18389,LH00995:25:23T55JLT4:2:2162:38263:12798,LH00995:25:23T55JLT4:2:2201:36402:18375,LH00995:25:23T55JLT4:2:2372:30973:6843,LH00995:25:23T55JLT4:5:1219:38400:8188,LH00995:25:23T55JLT4:5:1251:48618:6157,LH00995:25:23T55JLT4:5:1253:41822:17170,LH00995:25:23T55JLT4:5:1367:21492:7432,LH00995:25:23T55JLT4:5:1405:14891:11355,LH00995:25:23T55JLT4:5:1458:8847:22551,LH00995:25:23T55JLT4:5:1472:50867:16301,LH00995:25:23T55JLT4:5:1491:28441:21598,LH00995:25:23T55JLT4:5:2114:31540:25367,LH00995:25:23T55JLT4:5:2132:50891:23546,LH00995:25:23T55JLT4:5:2134:12261:22831,LH00995:25:23T55JLT4:5:2166:14518:20547,LH00995:25:23T55JLT4:5:2264:21338:23504,LH00995:25:23T55JLT4:5:2352:32389:19076,LH00995:25:23T55JLT4:5:2395:36653:8917,LH00995:25:23T55JLT4:5:2414:10409:2079,LH00995:25:23T55JLT4:6:1165:48763:9716,LH00995:25:23T55JLT4:6:1167:49969:13065,LH00995:25:23T55JLT4:6:1168:24493:16021,LH00995:25:23T55JLT4:6:1176:7529:13177,LH00995:25:23T55JLT4:6:1194:6679:24401,LH00995:25:23T55JLT4:6:1217:13855:19566,LH00995:25:23T55JLT4:6:1291:44516:4181,LH00995:25:23T55JLT4:6:1349:13200:10640,LH00995:25:23T55JLT4:6:1455:8427:22887,LH00995:25:23T55JLT4:6:2102:3783:22243,LH00995:25:23T55JLT4:6:2117:50228:23125,LH00995:25:23T55JLT4:6:2304:45908:2303,LH00995:25:23T55JLT4:6:2306:23822:18137,LH00995:25:23T55JLT4:6:2314:38012:9898,LH00995:25:23T55JLT4:6:2393:19300:27735,LH00995:25:23T55JLT4:6:2395:22026:22733,LH00995:25:23T55JLT4:6:2406:46749:11271,LH00995:25:23T55JLT4:6:2426:38683:8230,LH00995:25:23T55JLT4:8:1104:3281:9239,LH00995:25:23T55JLT4:8:1154:14284:23700,LH00995:25:23T55JLT4:8:1321:4689:28660,LH00995:25:23T55JLT4:8:1328:46215:23910,LH00995:25:23T55JLT4:8:1440:25618:14158,LH00995:25:23T55JLT4:8:1480:48537:1336,LH00995:25:23T55JLT4:8:2102:48666:12938,LH00995:25:23T55JLT4:8:2119:22843:17058,LH00995:25:23T55JLT4:8:2271:6339:25774,LH00995:25:23T55JLT4:8:2329:30270:15433,LH00995:25:23T55JLT4:8:2352:24679:19566,LH00995:25:23T55JLT4:8:2384:32761:22551,LH00995:25:23T55JLT4:8:2414:12366:17913,LH00995:25:23T55JLT4:8:2456:42744:16329,LH00995:25:23T55JLT4:8:2462:23029:29123,LH00995:25:23T55JLT4:8:2492:18717:14900	.	YES_LDAS	0.193	GT	1.8323	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[18611]""]"	chr3:99794382-chr3:100146973	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	57
CDV3--MT-RNR2	51	0	51.0	0.0	INCL_NON_REF_SPLICE	CDV3^ENSG00000091527.16	chr3:133575115:+	MT-RNR2^ENSG00000210082.2	chrM:2449:+	LH00995:25:23T55JLT4:2:1257:28708:7067,LH00995:25:23T55JLT4:2:1331:25804:21878,LH00995:25:23T55JLT4:2:1357:3071:5288,LH00995:25:23T55JLT4:2:1366:10870:25213,LH00995:25:23T55JLT4:2:1366:21767:14578,LH00995:25:23T55JLT4:2:1386:9737:22719,LH00995:25:23T55JLT4:2:1423:30965:20589,LH00995:25:23T55JLT4:2:1471:20586:9954,LH00995:25:23T55JLT4:2:2135:16331:16904,LH00995:25:23T55JLT4:2:2229:40681:1322,LH00995:25:23T55JLT4:2:2240:34031:11327,LH00995:25:23T55JLT4:2:2261:1178:8735,LH00995:25:23T55JLT4:2:2284:43917:7432,LH00995:25:23T55JLT4:2:2419:5352:25970,LH00995:25:23T55JLT4:2:2436:20634:15531,LH00995:25:23T55JLT4:5:1123:50931:6913,LH00995:25:23T55JLT4:5:1154:36596:13583,LH00995:25:23T55JLT4:5:1262:30100:7936,LH00995:25:23T55JLT4:5:1269:9834:15321,LH00995:25:23T55JLT4:5:1433:50988:17633,LH00995:25:23T55JLT4:5:1470:5352:25073,LH00995:25:23T55JLT4:5:1488:43845:29025,LH00995:25:23T55JLT4:5:2140:3904:26376,LH00995:25:23T55JLT4:5:2239:1704:13541,LH00995:25:23T55JLT4:5:2244:3273:2107,LH00995:25:23T55JLT4:5:2268:35593:2878,LH00995:25:23T55JLT4:5:2310:45916:19468,LH00995:25:23T55JLT4:5:2382:43772:8637,LH00995:25:23T55JLT4:5:2449:1202:7516,LH00995:25:23T55JLT4:6:1136:10004:14466,LH00995:25:23T55JLT4:6:1146:31815:27777,LH00995:25:23T55JLT4:6:1278:21484:2878,LH00995:25:23T55JLT4:6:1333:31168:8272,LH00995:25:23T55JLT4:6:1344:8928:11005,LH00995:25:23T55JLT4:6:1395:19971:6143,LH00995:25:23T55JLT4:6:1435:17665:14760,LH00995:25:23T55JLT4:6:1435:50511:21794,LH00995:25:23T55JLT4:6:1438:8152:22383,LH00995:25:23T55JLT4:6:1475:18774:23518,LH00995:25:23T55JLT4:6:2161:42558:22649,LH00995:25:23T55JLT4:6:2218:7084:6801,LH00995:25:23T55JLT4:6:2226:35318:9632,LH00995:25:23T55JLT4:6:2292:39516:25956,LH00995:25:23T55JLT4:6:2381:17415:8132,LH00995:25:23T55JLT4:6:2418:5336:21878,LH00995:25:23T55JLT4:8:1373:29671:13107,LH00995:25:23T55JLT4:8:1402:23150:26278,LH00995:25:23T55JLT4:8:1450:23466:10963,LH00995:25:23T55JLT4:8:2293:29194:12112,LH00995:25:23T55JLT4:8:2411:30448:10332,LH00995:25:23T55JLT4:8:2494:33659:28534	.	YES_LDAS	0.1727	GT	1.7968	AG	1.2419	"[""INTERCHROMOSOMAL[chr3--chrM]""]"	chr3:133575115-chrM:2449	False			0	Does not meet inclusion criteria	FAIL	51
KCNH5--NCOA3	48	0	48.0	0.0	INCL_NON_REF_SPLICE	KCNH5^ENSG00000140015.20	chr14:62950140:-	NCOA3^ENSG00000124151.19	chr20:47651081:+	LH00995:25:23T55JLT4:2:1133:17051:17170,LH00995:25:23T55JLT4:2:1171:6582:18571,LH00995:25:23T55JLT4:2:1239:20481:22607,LH00995:25:23T55JLT4:2:1264:31289:24877,LH00995:25:23T55JLT4:2:1281:46522:16119,LH00995:25:23T55JLT4:2:1456:38902:9814,LH00995:25:23T55JLT4:2:1471:33538:4643,LH00995:25:23T55JLT4:2:2112:30310:1631,LH00995:25:23T55JLT4:2:2151:1849:4713,LH00995:25:23T55JLT4:2:2207:25157:7614,LH00995:25:23T55JLT4:2:2238:43028:2135,LH00995:25:23T55JLT4:2:2246:21686:6058,LH00995:25:23T55JLT4:2:2282:18669:11537,LH00995:25:23T55JLT4:2:2286:28449:18417,LH00995:25:23T55JLT4:2:2437:15667:14970,LH00995:25:23T55JLT4:2:2458:31969:26474,LH00995:25:23T55JLT4:2:2470:49945:12490,LH00995:25:23T55JLT4:5:1128:16581:1112,LH00995:25:23T55JLT4:5:1152:39452:17492,LH00995:25:23T55JLT4:5:1159:14090:23896,LH00995:25:23T55JLT4:5:1244:25132:16540,LH00995:25:23T55JLT4:5:1302:6979:10486,LH00995:25:23T55JLT4:5:1323:23879:22803,LH00995:25:23T55JLT4:5:1469:31046:13275,LH00995:25:23T55JLT4:5:1469:46895:21024,LH00995:25:23T55JLT4:5:2289:3548:25003,LH00995:25:23T55JLT4:5:2368:42680:9183,LH00995:25:23T55JLT4:6:1204:50640:11481,LH00995:25:23T55JLT4:6:1223:42146:20589,LH00995:25:23T55JLT4:6:1238:22714:3774,LH00995:25:23T55JLT4:6:1249:45940:2163,LH00995:25:23T55JLT4:6:1336:14923:4293,LH00995:25:23T55JLT4:6:1397:35156:18095,LH00995:25:23T55JLT4:6:1439:8823:20855,LH00995:25:23T55JLT4:6:1476:30973:9870,LH00995:25:23T55JLT4:6:2240:32931:20939,LH00995:25:23T55JLT4:6:2334:8467:25984,LH00995:25:23T55JLT4:6:2375:26742:8679,LH00995:25:23T55JLT4:6:2377:2667:18067,LH00995:25:23T55JLT4:8:1102:27543:24078,LH00995:25:23T55JLT4:8:1116:37607:7684,LH00995:25:23T55JLT4:8:1119:18078:23938,LH00995:25:23T55JLT4:8:1125:22770:8749,LH00995:25:23T55JLT4:8:1317:2731:9800,LH00995:25:23T55JLT4:8:2175:30755:7754,LH00995:25:23T55JLT4:8:2183:49912:12490,LH00995:25:23T55JLT4:8:2365:36499:11145,LH00995:25:23T55JLT4:8:2425:10279:14186	.	NO_LDAS	0.1625	GT	1.7819	AG	1.5656	"[""INTERCHROMOSOMAL[chr14--chr20]""]"	chr14:62950140-chr20:47651081	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	48
TMEM65--ANXA13	45	1	45.0	0.58	ONLY_REF_SPLICE	TMEM65^ENSG00000164983.8	chr8:124371854:-	ANXA13^ENSG00000104537.17	chr8:123684722:-	LH00995:25:23T55JLT4:2:1106:23199:12826,LH00995:25:23T55JLT4:2:1116:37057:15587,LH00995:25:23T55JLT4:2:1131:7852:16596,LH00995:25:23T55JLT4:2:1134:26281:14914,LH00995:25:23T55JLT4:2:1384:19591:19636,LH00995:25:23T55JLT4:2:1430:16411:28506,LH00995:25:23T55JLT4:2:2315:2149:27315,LH00995:25:23T55JLT4:2:2374:9672:12406,LH00995:25:23T55JLT4:2:2401:47687:14242,LH00995:25:23T55JLT4:5:1221:39978:18571,LH00995:25:23T55JLT4:5:1242:19518:8188,LH00995:25:23T55JLT4:5:1326:11655:10907,LH00995:25:23T55JLT4:5:1367:1469:5624,LH00995:25:23T55JLT4:5:2162:36070:19987,LH00995:25:23T55JLT4:5:2175:20181:6927,LH00995:25:23T55JLT4:5:2253:1129:19833,LH00995:25:23T55JLT4:5:2303:6639:2359,LH00995:25:23T55JLT4:5:2312:28546:7039,LH00995:25:23T55JLT4:5:2370:34226:11439,LH00995:25:23T55JLT4:5:2403:8977:27147,LH00995:25:23T55JLT4:5:2462:13095:1883,LH00995:25:23T55JLT4:5:2476:18563:13009,LH00995:25:23T55JLT4:6:1116:22972:28941,LH00995:25:23T55JLT4:6:1176:14462:25297,LH00995:25:23T55JLT4:6:1295:46531:7278,LH00995:25:23T55JLT4:6:1329:24380:10640,LH00995:25:23T55JLT4:6:1391:43853:24919,LH00995:25:23T55JLT4:6:2160:38400:25760,LH00995:25:23T55JLT4:6:2192:26839:21738,LH00995:25:23T55JLT4:6:2337:2675:13681,LH00995:25:23T55JLT4:6:2344:40649:9253,LH00995:25:23T55JLT4:6:2433:8677:29039,LH00995:25:23T55JLT4:6:2485:5741:8931,LH00995:25:23T55JLT4:8:1130:49136:11593,LH00995:25:23T55JLT4:8:1226:32680:7810,LH00995:25:23T55JLT4:8:1348:28174:7432,LH00995:25:23T55JLT4:8:1411:41927:4517,LH00995:25:23T55JLT4:8:2106:13006:28520,LH00995:25:23T55JLT4:8:2187:14171:21710,LH00995:25:23T55JLT4:8:2194:47242:23840,LH00995:25:23T55JLT4:8:2222:50519:23938,LH00995:25:23T55JLT4:8:2251:15562:10584,LH00995:25:23T55JLT4:8:2280:49257:15615,LH00995:25:23T55JLT4:8:2311:1736:25367,LH00995:25:23T55JLT4:8:2340:51231:11355	LH00995:25:23T55JLT4:5:1369:35779:8889	YES_LDAS	0.1544	GT	1.9656	AG	1.9219	"[""INTRACHROMOSOMAL[chr8:0.57Mb]""]"	chr8:124371854-chr8:123684722	False			1		PASS	46
RPSAP52--HMGA2	44	0	44.0	0.0	ONLY_REF_SPLICE	RPSAP52^ENSG00000241749.4	chr12:65826843:-	HMGA2^ENSG00000149948.14	chr12:65828001:+	LH00995:25:23T55JLT4:2:1148:35496:26671,LH00995:25:23T55JLT4:2:1171:45503:19678,LH00995:25:23T55JLT4:2:1177:6420:7558,LH00995:25:23T55JLT4:2:2172:31168:28338,LH00995:25:23T55JLT4:2:2196:11938:23700,LH00995:25:23T55JLT4:2:2216:24372:10851,LH00995:25:23T55JLT4:2:2257:7674:18081,LH00995:25:23T55JLT4:2:2295:10384:8903,LH00995:25:23T55JLT4:2:2330:42073:2864,LH00995:25:23T55JLT4:2:2360:5684:12252,LH00995:25:23T55JLT4:2:2409:36402:23532,LH00995:25:23T55JLT4:2:2421:41159:4279,LH00995:25:23T55JLT4:2:2444:42947:29683,LH00995:25:23T55JLT4:2:2455:7035:8875,LH00995:25:23T55JLT4:2:2458:51198:16596,LH00995:25:23T55JLT4:5:1214:6000:29613,LH00995:25:23T55JLT4:5:1237:15085:21108,LH00995:25:23T55JLT4:5:1251:3880:23896,LH00995:25:23T55JLT4:5:1270:26799:28394,LH00995:25:23T55JLT4:5:1309:27179:2121,LH00995:25:23T55JLT4:5:1359:38707:15475,LH00995:25:23T55JLT4:5:1410:24655:2541,LH00995:25:23T55JLT4:5:2197:28377:14704,LH00995:25:23T55JLT4:5:2281:22811:29501,LH00995:25:23T55JLT4:5:2325:21621:7292,LH00995:25:23T55JLT4:5:2330:1073:1322,LH00995:25:23T55JLT4:5:2378:42146:17535,LH00995:25:23T55JLT4:6:1109:34234:10753,LH00995:25:23T55JLT4:6:1114:2553:15180,LH00995:25:23T55JLT4:6:1182:34185:23139,LH00995:25:23T55JLT4:6:1238:45212:4349,LH00995:25:23T55JLT4:6:1464:44079:16231,LH00995:25:23T55JLT4:6:2201:33247:27175,LH00995:25:23T55JLT4:6:2276:4996:24344,LH00995:25:23T55JLT4:6:2371:48302:12756,LH00995:25:23T55JLT4:6:2412:18709:29543,LH00995:25:23T55JLT4:8:2128:30351:13947,LH00995:25:23T55JLT4:8:2148:8313:20225,LH00995:25:23T55JLT4:8:2184:6081:20113,LH00995:25:23T55JLT4:8:2214:30367:24485,LH00995:25:23T55JLT4:8:2287:16055:11495,LH00995:25:23T55JLT4:8:2308:30407:29599,LH00995:25:23T55JLT4:8:2317:22398:25536,LH00995:25:23T55JLT4:8:2444:40042:18908	.	YES_LDAS	0.149	GT	1.9329	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[2537]""]"	chr12:65826843-chr12:65828001	False			1		PASS	44
B4GALT6--DSC3	44	0	44.0	0.0	ONLY_REF_SPLICE	B4GALT6^ENSG00000118276.11	chr18:31684312:-	DSC3^ENSG00000134762.17	chr18:30994372:-	LH00995:25:23T55JLT4:2:1126:29080:24330,LH00995:25:23T55JLT4:2:1148:40641:18487,LH00995:25:23T55JLT4:2:1152:13289:11775,LH00995:25:23T55JLT4:2:1209:18992:18684,LH00995:25:23T55JLT4:2:1209:23223:7936,LH00995:25:23T55JLT4:2:1422:13451:13121,LH00995:25:23T55JLT4:2:2105:48480:3312,LH00995:25:23T55JLT4:2:2176:32891:7614,LH00995:25:23T55JLT4:2:2191:8799:28969,LH00995:25:23T55JLT4:2:2204:29412:2513,LH00995:25:23T55JLT4:2:2241:34104:14144,LH00995:25:23T55JLT4:2:2321:22794:6465,LH00995:25:23T55JLT4:5:1103:35552:20771,LH00995:25:23T55JLT4:5:1261:6275:5848,LH00995:25:23T55JLT4:5:1328:51821:27119,LH00995:25:23T55JLT4:5:1436:26540:1490,LH00995:25:23T55JLT4:5:1457:40754:22915,LH00995:25:23T55JLT4:5:1458:33489:25970,LH00995:25:23T55JLT4:5:2168:47849:23714,LH00995:25:23T55JLT4:5:2221:50066:4545,LH00995:25:23T55JLT4:5:2390:24000:27918,LH00995:25:23T55JLT4:6:1110:42308:28884,LH00995:25:23T55JLT4:6:1142:20756:20141,LH00995:25:23T55JLT4:6:1143:11630:18375,LH00995:25:23T55JLT4:6:1156:15166:12784,LH00995:25:23T55JLT4:6:1251:21395:28422,LH00995:25:23T55JLT4:6:1404:31087:26713,LH00995:25:23T55JLT4:6:1409:34031:14017,LH00995:25:23T55JLT4:6:1488:6129:3018,LH00995:25:23T55JLT4:6:2156:48691:4461,LH00995:25:23T55JLT4:6:2295:1437:27119,LH00995:25:23T55JLT4:6:2344:19194:24863,LH00995:25:23T55JLT4:6:2351:32422:21010,LH00995:25:23T55JLT4:8:1161:7804:21808,LH00995:25:23T55JLT4:8:1183:44832:25381,LH00995:25:23T55JLT4:8:1256:37583:21290,LH00995:25:23T55JLT4:8:1268:39152:3690,LH00995:25:23T55JLT4:8:1278:49491:24120,LH00995:25:23T55JLT4:8:1364:21589:6255,LH00995:25:23T55JLT4:8:1384:26977:11719,LH00995:25:23T55JLT4:8:1423:4285:10809,LH00995:25:23T55JLT4:8:2302:51182:9590,LH00995:25:23T55JLT4:8:2337:13588:12070,LH00995:25:23T55JLT4:8:2339:4681:13149	.	YES_LDAS	0.149	GT	1.8323	AG	1.9086	"[""INTRACHROMOSOMAL[chr18:0.58Mb]""]"	chr18:31684312-chr18:30994372	False			1		PASS	44
BIRC3--PDGFD	43	0	43.0	0.0	ONLY_REF_SPLICE	BIRC3^ENSG00000023445.16	chr11:102317571:+	PDGFD^ENSG00000170962.13	chr11:104000255:-	LH00995:25:23T55JLT4:2:1113:43189:15054,LH00995:25:23T55JLT4:2:1132:36572:13485,LH00995:25:23T55JLT4:2:1216:22341:7446,LH00995:25:23T55JLT4:2:1216:22358:7446,LH00995:25:23T55JLT4:2:1280:38157:27862,LH00995:25:23T55JLT4:2:1282:32672:22733,LH00995:25:23T55JLT4:2:1310:19469:16035,LH00995:25:23T55JLT4:2:1348:39436:16540,LH00995:25:23T55JLT4:2:1419:16201:1238,LH00995:25:23T55JLT4:2:1419:47898:27133,LH00995:25:23T55JLT4:2:2116:3726:20996,LH00995:25:23T55JLT4:2:2146:49702:17086,LH00995:25:23T55JLT4:2:2163:40649:3676,LH00995:25:23T55JLT4:2:2174:17334:20071,LH00995:25:23T55JLT4:2:2369:1947:23910,LH00995:25:23T55JLT4:2:2391:2537:4867,LH00995:25:23T55JLT4:2:2452:33789:13317,LH00995:25:23T55JLT4:5:1184:22479:17436,LH00995:25:23T55JLT4:5:1186:26233:16764,LH00995:25:23T55JLT4:5:1277:21079:6409,LH00995:25:23T55JLT4:5:1327:45511:2878,LH00995:25:23T55JLT4:5:1458:28498:10682,LH00995:25:23T55JLT4:5:2333:28449:26600,LH00995:25:23T55JLT4:5:2457:26435:1813,LH00995:25:23T55JLT4:6:1114:19130:12476,LH00995:25:23T55JLT4:6:1262:26694:28212,LH00995:25:23T55JLT4:6:1469:29825:10094,LH00995:25:23T55JLT4:6:1486:34679:23378,LH00995:25:23T55JLT4:6:1490:11614:22663,LH00995:25:23T55JLT4:6:2104:18248:3746,LH00995:25:23T55JLT4:6:2173:11776:11789,LH00995:25:23T55JLT4:6:2175:42057:3788,LH00995:25:23T55JLT4:6:2272:42291:23083,LH00995:25:23T55JLT4:6:2344:48343:22775,LH00995:25:23T55JLT4:8:1151:9503:25620,LH00995:25:23T55JLT4:8:1348:27430:18305,LH00995:25:23T55JLT4:8:1373:32818:27189,LH00995:25:23T55JLT4:8:1374:49443:2345,LH00995:25:23T55JLT4:8:1386:30140:17338,LH00995:25:23T55JLT4:8:2103:33198:18319,LH00995:25:23T55JLT4:8:2177:48173:24022,LH00995:25:23T55JLT4:8:2357:27284:14858,LH00995:25:23T55JLT4:8:2493:23061:4937	.	YES_LDAS	0.1456	GT	1.8323	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:1.57Mb]""]"	chr11:102317571-chr11:104000255	False			1		PASS	43
TMEM123--PDGFD	42	0	42.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	PDGFD^ENSG00000170962.13	chr11:104000255:-	LH00995:25:23T55JLT4:2:1113:8629:19566,LH00995:25:23T55JLT4:2:1291:43238:27946,LH00995:25:23T55JLT4:2:1301:36580:3971,LH00995:25:23T55JLT4:2:1366:42518:19636,LH00995:25:23T55JLT4:2:1450:34954:23041,LH00995:25:23T55JLT4:2:2134:4082:1883,LH00995:25:23T55JLT4:2:2180:27972:28520,LH00995:25:23T55JLT4:2:2202:12900:23882,LH00995:25:23T55JLT4:2:2260:48351:6002,LH00995:25:23T55JLT4:2:2374:14737:24737,LH00995:25:23T55JLT4:2:2431:41830:14634,LH00995:25:23T55JLT4:2:2451:23555:6997,LH00995:25:23T55JLT4:2:2458:41312:3957,LH00995:25:23T55JLT4:5:1142:38521:2205,LH00995:25:23T55JLT4:5:1182:51571:24863,LH00995:25:23T55JLT4:5:1193:52096:21682,LH00995:25:23T55JLT4:5:1315:24663:6507,LH00995:25:23T55JLT4:5:2146:26160:13051,LH00995:25:23T55JLT4:5:2333:21387:25970,LH00995:25:23T55JLT4:5:2378:25909:22173,LH00995:25:23T55JLT4:5:2476:45503:10262,LH00995:25:23T55JLT4:6:1174:51118:17072,LH00995:25:23T55JLT4:6:1251:33619:12210,LH00995:25:23T55JLT4:6:1487:3120:8623,LH00995:25:23T55JLT4:6:2192:29825:25479,LH00995:25:23T55JLT4:6:2275:38627:7348,LH00995:25:23T55JLT4:6:2367:20489:18137,LH00995:25:23T55JLT4:6:2370:6574:8945,LH00995:25:23T55JLT4:6:2484:37785:13457,LH00995:25:23T55JLT4:8:1179:14122:29389,LH00995:25:23T55JLT4:8:1236:32891:27315,LH00995:25:23T55JLT4:8:1248:39670:15012,LH00995:25:23T55JLT4:8:1272:8184:2709,LH00995:25:23T55JLT4:8:1311:45697:16596,LH00995:25:23T55JLT4:8:1361:8572:1532,LH00995:25:23T55JLT4:8:2101:19065:16540,LH00995:25:23T55JLT4:8:2114:9592:27988,LH00995:25:23T55JLT4:8:2139:8613:12364,LH00995:25:23T55JLT4:8:2188:36839:3158,LH00995:25:23T55JLT4:8:2242:24137:3018,LH00995:25:23T55JLT4:8:2252:1105:18950,LH00995:25:23T55JLT4:8:2256:28401:2780	.	YES_LDAS	0.1422	GT	1.9656	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:1.44Mb]""]"	chr11:102448812-chr11:104000255	False			1		PASS	42
IGH@-ext--CREB3L2	41	0	41.0	0.0	INCL_NON_REF_SPLICE	IGH@-ext^IGH.g@-ext	chr14:105760805:-	CREB3L2^ENSG00000182158.15	chr7:137928171:-	LH00995:25:23T55JLT4:2:1108:24404:22229,LH00995:25:23T55JLT4:2:1188:24332:12406,LH00995:25:23T55JLT4:2:1190:22956:4727,LH00995:25:23T55JLT4:2:1201:27665:4643,LH00995:25:23T55JLT4:2:1222:9203:24316,LH00995:25:23T55JLT4:2:1281:13604:6297,LH00995:25:23T55JLT4:2:1332:8111:22537,LH00995:25:23T55JLT4:2:1350:17585:10248,LH00995:25:23T55JLT4:2:1382:16007:22425,LH00995:25:23T55JLT4:2:1418:46781:1406,LH00995:25:23T55JLT4:2:1429:15756:13415,LH00995:25:23T55JLT4:2:1435:21929:25872,LH00995:25:23T55JLT4:2:1443:47218:22929,LH00995:25:23T55JLT4:2:2225:4843:19931,LH00995:25:23T55JLT4:2:2270:19259:10262,LH00995:25:23T55JLT4:2:2353:9381:5400,LH00995:25:23T55JLT4:5:1375:6485:18039,LH00995:25:23T55JLT4:5:1381:46086:21388,LH00995:25:23T55JLT4:5:1401:8022:29585,LH00995:25:23T55JLT4:5:1447:24388:16175,LH00995:25:23T55JLT4:5:1455:20351:24961,LH00995:25:23T55JLT4:5:1493:1882:10739,LH00995:25:23T55JLT4:5:2237:33942:25073,LH00995:25:23T55JLT4:5:2347:21193:23167,LH00995:25:23T55JLT4:5:2397:42210:18487,LH00995:25:23T55JLT4:5:2477:29679:18557,LH00995:25:23T55JLT4:5:2498:45988:11327,LH00995:25:23T55JLT4:6:1150:33231:20309,LH00995:25:23T55JLT4:6:1253:29946:21374,LH00995:25:23T55JLT4:6:1386:6946:10402,LH00995:25:23T55JLT4:6:2286:30075:28324,LH00995:25:23T55JLT4:6:2305:19664:13933,LH00995:25:23T55JLT4:6:2331:49346:29137,LH00995:25:23T55JLT4:6:2335:44468:17184,LH00995:25:23T55JLT4:8:1104:29728:17605,LH00995:25:23T55JLT4:8:1244:48302:13681,LH00995:25:23T55JLT4:8:1316:26799:21416,LH00995:25:23T55JLT4:8:1320:11307:5316,LH00995:25:23T55JLT4:8:2125:35027:19188,LH00995:25:23T55JLT4:8:2301:14834:11453,LH00995:25:23T55JLT4:8:2432:10983:27511	.	NO_LDAS	0.1388	CC	1.4566	CC	1.9656	"[""INTERCHROMOSOMAL[chr14--chr7]""]"	chr14:105760805-chr7:137928171	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	41
CLTC--VMP1	38	3	38.0	3.0	ONLY_REF_SPLICE	CLTC^ENSG00000141367.12	chr17:59690711:+	VMP1^ENSG00000062716.13	chr17:59838295:+	LH00995:25:23T55JLT4:2:1112:23725:12140,LH00995:25:23T55JLT4:2:1142:27543:22145,LH00995:25:23T55JLT4:2:1170:4932:21374,LH00995:25:23T55JLT4:2:1252:31750:18165,LH00995:25:23T55JLT4:2:1258:34760:14073,LH00995:25:23T55JLT4:2:2135:22875:18291,LH00995:25:23T55JLT4:2:2314:51781:25283,LH00995:25:23T55JLT4:5:1194:18782:13415,LH00995:25:23T55JLT4:5:1431:18604:3242,LH00995:25:23T55JLT4:5:2104:44985:14101,LH00995:25:23T55JLT4:5:2166:42251:7628,LH00995:25:23T55JLT4:5:2184:27867:17997,LH00995:25:23T55JLT4:5:2236:23579:14662,LH00995:25:23T55JLT4:5:2257:27058:7516,LH00995:25:23T55JLT4:5:2282:27479:5162,LH00995:25:23T55JLT4:5:2356:30100:5050,LH00995:25:23T55JLT4:5:2474:39605:13947,LH00995:25:23T55JLT4:6:1218:1396:19398,LH00995:25:23T55JLT4:6:1395:10012:13891,LH00995:25:23T55JLT4:6:1428:27026:8637,LH00995:25:23T55JLT4:6:1437:14357:1855,LH00995:25:23T55JLT4:6:1444:6517:4027,LH00995:25:23T55JLT4:6:2157:39686:20561,LH00995:25:23T55JLT4:6:2172:12253:24583,LH00995:25:23T55JLT4:6:2222:24178:12084,LH00995:25:23T55JLT4:6:2262:6121:4321,LH00995:25:23T55JLT4:6:2420:1008:11944,LH00995:25:23T55JLT4:6:2421:17253:20155,LH00995:25:23T55JLT4:8:1135:44063:28422,LH00995:25:23T55JLT4:8:1149:12480:18445,LH00995:25:23T55JLT4:8:1153:32486:7754,LH00995:25:23T55JLT4:8:1186:31038:5778,LH00995:25:23T55JLT4:8:1363:45082:6143,LH00995:25:23T55JLT4:8:2135:17326:22635,LH00995:25:23T55JLT4:8:2238:49726:5694,LH00995:25:23T55JLT4:8:2290:21573:28450,LH00995:25:23T55JLT4:8:2346:39792:12336,LH00995:25:23T55JLT4:8:2401:44565:15867	LH00995:25:23T55JLT4:2:2409:47542:4405,LH00995:25:23T55JLT4:6:1256:44459:9463,LH00995:25:23T55JLT4:8:2260:36798:24919	YES_LDAS	0.1389	GT	1.8892	AG	1.8062	"[""Klijn_CellLines"",""Larsson_TCGA"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""NEIGHBORS[10236]""]"	chr17:59690711-chr17:59838295	False			1		PASS	41
TBC1D13--AL442224.1	32	0	32.0	0.0	ONLY_REF_SPLICE	TBC1D13^ENSG00000107021.16	chr9:128792574:+	AL442224.1^ENSG00000231990.2	chr9:93825711:+	LH00995:25:23T55JLT4:2:1161:8305:3985,LH00995:25:23T55JLT4:2:1259:37996:10038,LH00995:25:23T55JLT4:2:1344:11323:8483,LH00995:25:23T55JLT4:2:1379:33239:7908,LH00995:25:23T55JLT4:2:1386:17795:19496,LH00995:25:23T55JLT4:2:1495:20982:10192,LH00995:25:23T55JLT4:2:2154:41555:3228,LH00995:25:23T55JLT4:2:2342:8783:29697,LH00995:25:23T55JLT4:2:2367:36143:8314,LH00995:25:23T55JLT4:2:2386:21516:29445,LH00995:25:23T55JLT4:5:1244:18847:23308,LH00995:25:23T55JLT4:5:1273:10045:3410,LH00995:25:23T55JLT4:5:1391:46539:18529,LH00995:25:23T55JLT4:5:2197:35043:4559,LH00995:25:23T55JLT4:5:2214:28199:4727,LH00995:25:23T55JLT4:5:2280:1947:21976,LH00995:25:23T55JLT4:5:2291:11307:4783,LH00995:25:23T55JLT4:5:2325:2836:11467,LH00995:25:23T55JLT4:5:2430:46134:5638,LH00995:25:23T55JLT4:6:1187:39363:22943,LH00995:25:23T55JLT4:6:1219:44840:18782,LH00995:25:23T55JLT4:6:1222:10190:21066,LH00995:25:23T55JLT4:6:1305:11962:15923,LH00995:25:23T55JLT4:6:1479:3298:5428,LH00995:25:23T55JLT4:6:2117:13548:20799,LH00995:25:23T55JLT4:6:2195:30626:12154,LH00995:25:23T55JLT4:6:2333:34509:10360,LH00995:25:23T55JLT4:6:2390:41709:1589,LH00995:25:23T55JLT4:8:1132:45980:23139,LH00995:25:23T55JLT4:8:1141:24688:29613,LH00995:25:23T55JLT4:8:1395:24599:8188,LH00995:25:23T55JLT4:8:2271:36386:29501	.	YES_LDAS	0.1084	GT	1.9329	AG	1.9086	"[""INTRACHROMOSOMAL[chr9:34.93Mb]""]"	chr9:128792574-chr9:93825711	False			1		PASS	32
TMEM65--ANXA13	32	1	32.0	0.42	ONLY_REF_SPLICE	TMEM65^ENSG00000164983.8	chr8:124371854:-	ANXA13^ENSG00000104537.17	chr8:123688946:-	LH00995:25:23T55JLT4:2:1116:29186:12070,LH00995:25:23T55JLT4:2:1202:36305:14844,LH00995:25:23T55JLT4:2:2102:8661:25395,LH00995:25:23T55JLT4:2:2111:47420:7754,LH00995:25:23T55JLT4:2:2129:15683:27974,LH00995:25:23T55JLT4:2:2252:10910:19006,LH00995:25:23T55JLT4:2:2452:9681:19819,LH00995:25:23T55JLT4:2:2455:22155:27777,LH00995:25:23T55JLT4:5:1153:17083:1645,LH00995:25:23T55JLT4:5:1356:45074:9968,LH00995:25:23T55JLT4:5:1467:15497:13723,LH00995:25:23T55JLT4:5:1478:42469:13891,LH00995:25:23T55JLT4:5:2189:11703:11775,LH00995:25:23T55JLT4:5:2221:7245:16049,LH00995:25:23T55JLT4:5:2233:14243:19987,LH00995:25:23T55JLT4:5:2305:2893:19945,LH00995:25:23T55JLT4:5:2384:4721:7726,LH00995:25:23T55JLT4:5:2411:36402:5624,LH00995:25:23T55JLT4:5:2430:45131:1603,LH00995:25:23T55JLT4:5:2440:31629:24204,LH00995:25:23T55JLT4:6:1142:28045:7179,LH00995:25:23T55JLT4:6:1171:27244:19328,LH00995:25:23T55JLT4:6:1317:50624:22271,LH00995:25:23T55JLT4:6:1490:14713:8805,LH00995:25:23T55JLT4:6:2137:14001:9001,LH00995:25:23T55JLT4:6:2161:40212:7852,LH00995:25:23T55JLT4:6:2289:10902:9351,LH00995:25:23T55JLT4:6:2311:32413:3901,LH00995:25:23T55JLT4:6:2420:32543:8300,LH00995:25:23T55JLT4:8:1212:24696:4349,LH00995:25:23T55JLT4:8:1283:23466:24022,LH00995:25:23T55JLT4:8:2286:18385:21612	LH00995:25:23T55JLT4:5:1369:35779:8889	YES_LDAS	0.1098	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr8:0.57Mb]""]"	chr8:124371854-chr8:123688946	False			1		PASS	33
PDCD1LG2--DYNC2H1	31	2	31.0	1.41	ONLY_REF_SPLICE	PDCD1LG2^ENSG00000197646.8	chr9:5535050:+	DYNC2H1^ENSG00000187240.16	chr11:103114103:+	LH00995:25:23T55JLT4:2:1125:35463:13583,LH00995:25:23T55JLT4:2:1144:14090:12826,LH00995:25:23T55JLT4:2:1160:13483:19258,LH00995:25:23T55JLT4:2:1165:28660:21248,LH00995:25:23T55JLT4:2:1203:42105:7600,LH00995:25:23T55JLT4:2:1213:33805:19314,LH00995:25:23T55JLT4:2:1343:38246:11229,LH00995:25:23T55JLT4:2:1435:11121:10823,LH00995:25:23T55JLT4:2:2103:38157:20071,LH00995:25:23T55JLT4:2:2106:15837:13331,LH00995:25:23T55JLT4:2:2408:41369:10893,LH00995:25:23T55JLT4:5:1219:35884:25970,LH00995:25:23T55JLT4:5:1308:49063:23322,LH00995:25:23T55JLT4:5:1436:3427:21066,LH00995:25:23T55JLT4:5:2353:20974:17492,LH00995:25:23T55JLT4:5:2407:11679:25858,LH00995:25:23T55JLT4:6:1145:27009:23770,LH00995:25:23T55JLT4:6:1369:19227:4685,LH00995:25:23T55JLT4:6:1485:18571:21038,LH00995:25:23T55JLT4:6:2340:51409:24050,LH00995:25:23T55JLT4:8:1107:45535:11019,LH00995:25:23T55JLT4:8:1129:8338:10402,LH00995:25:23T55JLT4:8:1203:11622:2415,LH00995:25:23T55JLT4:8:1327:16411:6871,LH00995:25:23T55JLT4:8:2171:9211:3844,LH00995:25:23T55JLT4:8:2183:22050:8398,LH00995:25:23T55JLT4:8:2307:5992:3929,LH00995:25:23T55JLT4:8:2307:6768:3985,LH00995:25:23T55JLT4:8:2387:11533:20954,LH00995:25:23T55JLT4:8:2396:50414:23840,LH00995:25:23T55JLT4:8:2489:35407:2163	LH00995:25:23T55JLT4:8:1496:15158:26166,LH00995:25:23T55JLT4:8:2334:1073:1743	YES_LDAS	0.1098	GT	1.9219	AG	1.8323	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:5535050-chr11:103114103	False			1		PASS	33
SAA4--SAA1	28	0	28.0	0.0	ONLY_REF_SPLICE	SAA4^ENSG00000148965.10	chr11:18232395:-	SAA1^ENSG00000173432.12	chr11:18269717:+	LH00995:25:23T55JLT4:2:1127:20748:23658,LH00995:25:23T55JLT4:2:1298:23571:29613,LH00995:25:23T55JLT4:2:1479:41806:10500,LH00995:25:23T55JLT4:2:2151:33376:29361,LH00995:25:23T55JLT4:2:2339:40973:10038,LH00995:25:23T55JLT4:2:2366:42154:4853,LH00995:25:23T55JLT4:2:2419:14486:22088,LH00995:25:23T55JLT4:5:1176:39072:29053,LH00995:25:23T55JLT4:5:1270:14834:9267,LH00995:25:23T55JLT4:5:1434:18410:5400,LH00995:25:23T55JLT4:5:1492:29226:15699,LH00995:25:23T55JLT4:5:2121:9745:28534,LH00995:25:23T55JLT4:5:2143:5644:25550,LH00995:25:23T55JLT4:5:2366:14963:5848,LH00995:25:23T55JLT4:5:2382:45390:28254,LH00995:25:23T55JLT4:5:2496:5668:3592,LH00995:25:23T55JLT4:6:1134:3734:17899,LH00995:25:23T55JLT4:6:1207:10514:7894,LH00995:25:23T55JLT4:6:2159:40924:4293,LH00995:25:23T55JLT4:6:2250:4001:16428,LH00995:25:23T55JLT4:6:2336:18329:6241,LH00995:25:23T55JLT4:6:2341:28482:6199,LH00995:25:23T55JLT4:8:1210:4713:16259,LH00995:25:23T55JLT4:8:1364:27284:22565,LH00995:25:23T55JLT4:8:2156:43125:1546,LH00995:25:23T55JLT4:8:2194:41442:5050,LH00995:25:23T55JLT4:8:2327:51158:23952,LH00995:25:23T55JLT4:8:2426:35285:3046	.	YES_LDAS	0.0948	GT	1.9329	AG	1.7819	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.03Mb]"",""LOCAL_INVERSION:-:+:[29458]""]"	chr11:18232395-chr11:18269717	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	28
SH3BP5--AC002074.1	27	0	27.0	0.0	ONLY_REF_SPLICE	SH3BP5^ENSG00000131370.16	chr3:15304103:-	AC002074.1^ENSG00000285090.1	chr7:94279390:-	LH00995:25:23T55JLT4:2:1230:17261:12798,LH00995:25:23T55JLT4:2:1262:5919:23952,LH00995:25:23T55JLT4:2:1327:27600:28492,LH00995:25:23T55JLT4:2:1395:29865:4055,LH00995:25:23T55JLT4:2:1402:33692:11467,LH00995:25:23T55JLT4:2:2144:19825:9085,LH00995:25:23T55JLT4:2:2173:46353:29473,LH00995:25:23T55JLT4:2:2214:33239:6283,LH00995:25:23T55JLT4:5:1137:26087:10262,LH00995:25:23T55JLT4:5:1318:36175:26867,LH00995:25:23T55JLT4:5:1319:1299:6199,LH00995:25:23T55JLT4:5:1452:44136:26558,LH00995:25:23T55JLT4:5:2178:4721:29445,LH00995:25:23T55JLT4:5:2225:27689:7768,LH00995:25:23T55JLT4:5:2293:15538:20435,LH00995:25:23T55JLT4:5:2442:50665:5722,LH00995:25:23T55JLT4:6:1421:34929:28072,LH00995:25:23T55JLT4:8:1206:39727:8637,LH00995:25:23T55JLT4:8:1280:44904:22621,LH00995:25:23T55JLT4:8:1341:14251:1168,LH00995:25:23T55JLT4:8:1430:4786:5288,LH00995:25:23T55JLT4:8:1447:8410:2485,LH00995:25:23T55JLT4:8:2102:11873:18235,LH00995:25:23T55JLT4:8:2154:10854:9407,LH00995:25:23T55JLT4:8:2253:1275:12938,LH00995:25:23T55JLT4:8:2397:48771:20015,LH00995:25:23T55JLT4:8:2498:5959:8889	.	YES_LDAS	0.0914	GT	1.5546	AG	1.5546	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:15304103-chr7:94279390	False			1		PASS	27
LILRB1--AC245884.12	27	0	24.84	0.0	ONLY_REF_SPLICE	LILRB1^ENSG00000104972.15	chr19:54633318:+	AC245884.12^ENSG00000276758.1	chr19:54296252:-	LH00995:25:23T55JLT4:2:1242:6388:5092,LH00995:25:23T55JLT4:2:1274:35374:17156,LH00995:25:23T55JLT4:2:1376:29970:28926,LH00995:25:23T55JLT4:2:2131:28692:4489,LH00995:25:23T55JLT4:2:2197:44354:26096,LH00995:25:23T55JLT4:2:2285:31710:12798,LH00995:25:23T55JLT4:2:2387:30545:4139,LH00995:25:23T55JLT4:5:1220:5587:25788,LH00995:25:23T55JLT4:5:1277:24501:19594,LH00995:25:23T55JLT4:5:1344:3629:7179,LH00995:25:23T55JLT4:5:1354:1801:24583,LH00995:25:23T55JLT4:5:2282:41434:21262,LH00995:25:23T55JLT4:5:2359:6105:1210,LH00995:25:23T55JLT4:5:2385:45786:22327,LH00995:25:23T55JLT4:6:1331:34072:23756,LH00995:25:23T55JLT4:6:1343:10465:23672,LH00995:25:23T55JLT4:6:1374:41490:11607,LH00995:25:23T55JLT4:6:1409:28627:17520,LH00995:25:23T55JLT4:6:1433:11606:7263,LH00995:25:23T55JLT4:6:2458:17843:15517,LH00995:25:23T55JLT4:6:2462:6898:28282,LH00995:25:23T55JLT4:6:2471:13030:25704,LH00995:25:23T55JLT4:8:1150:42858:13023,LH00995:25:23T55JLT4:8:1319:8774:21080,LH00995:25:23T55JLT4:8:1319:8783:21094,LH00995:25:23T55JLT4:8:1379:1955:15040,LH00995:25:23T55JLT4:8:2303:16751:3256	.	YES_LDAS	0.0841	GT	1.9329	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr19:0.32Mb]""]"	chr19:54633318-chr19:54296252	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	27
UMAD1--GLCCI1	27	2	27.0	2.0	ONLY_REF_SPLICE	UMAD1^ENSG00000219545.11	chr7:7801743:+	GLCCI1^ENSG00000106415.13	chr7:8003908:+	LH00995:25:23T55JLT4:2:1262:50122:16582,LH00995:25:23T55JLT4:2:1342:8912:18235,LH00995:25:23T55JLT4:2:1451:47509:24106,LH00995:25:23T55JLT4:2:2103:8297:13023,LH00995:25:23T55JLT4:2:2141:43966:8945,LH00995:25:23T55JLT4:2:2187:22819:20771,LH00995:25:23T55JLT4:2:2216:39670:15124,LH00995:25:23T55JLT4:2:2347:48812:5568,LH00995:25:23T55JLT4:5:1269:23377:21458,LH00995:25:23T55JLT4:5:1396:30957:21584,LH00995:25:23T55JLT4:5:1473:37348:14214,LH00995:25:23T55JLT4:5:2224:29258:23574,LH00995:25:23T55JLT4:5:2273:20497:27595,LH00995:25:23T55JLT4:6:1124:31588:10150,LH00995:25:23T55JLT4:6:1244:39298:19664,LH00995:25:23T55JLT4:6:1395:40560:8763,LH00995:25:23T55JLT4:6:1405:16751:27133,LH00995:25:23T55JLT4:6:1418:25181:20687,LH00995:25:23T55JLT4:6:1420:33611:23826,LH00995:25:23T55JLT4:6:1468:9923:6030,LH00995:25:23T55JLT4:6:2194:45568:25648,LH00995:25:23T55JLT4:6:2297:1502:17983,LH00995:25:23T55JLT4:6:2362:12561:29347,LH00995:25:23T55JLT4:6:2459:7116:21626,LH00995:25:23T55JLT4:8:1191:37486:13107,LH00995:25:23T55JLT4:8:1268:1267:8441,LH00995:25:23T55JLT4:8:2229:25941:27413	LH00995:25:23T55JLT4:6:1421:33570:15321,LH00995:25:23T55JLT4:6:1421:33578:15307	YES_LDAS	0.0982	GT	1.9656	AG	1.7465	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]"	chr7:7801743-chr7:8003908	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	29
COL1A1--SLC45A4	26	0	26.0	0.0	INCL_NON_REF_SPLICE	COL1A1^ENSG00000108821.14	chr17:50189867:-	SLC45A4^ENSG00000022567.10	chr8:141254178:-	LH00995:25:23T55JLT4:2:1138:27568:28800,LH00995:25:23T55JLT4:2:2175:24979:9295,LH00995:25:23T55JLT4:2:2263:40204:28352,LH00995:25:23T55JLT4:2:2356:28498:17100,LH00995:25:23T55JLT4:2:2377:17423:19300,LH00995:25:23T55JLT4:2:2425:8241:18333,LH00995:25:23T55JLT4:5:1153:48869:22369,LH00995:25:23T55JLT4:5:1388:21023:9337,LH00995:25:23T55JLT4:5:1404:11113:24597,LH00995:25:23T55JLT4:5:2154:25941:25395,LH00995:25:23T55JLT4:5:2175:34768:24961,LH00995:25:23T55JLT4:5:2181:21888:28604,LH00995:25:23T55JLT4:5:2364:27673:10682,LH00995:25:23T55JLT4:5:2418:37373:15265,LH00995:25:23T55JLT4:5:2482:42461:26012,LH00995:25:23T55JLT4:6:1163:20408:1350,LH00995:25:23T55JLT4:6:1372:38335:3620,LH00995:25:23T55JLT4:6:1406:7496:5862,LH00995:25:23T55JLT4:6:2157:1210:13219,LH00995:25:23T55JLT4:6:2365:27017:29641,LH00995:25:23T55JLT4:8:1306:17762:23083,LH00995:25:23T55JLT4:8:1491:17536:2822,LH00995:25:23T55JLT4:8:2233:8766:10332,LH00995:25:23T55JLT4:8:2288:34315:10304,LH00995:25:23T55JLT4:8:2387:24599:22173,LH00995:25:23T55JLT4:8:2401:5061:27203	.	YES_LDAS	0.088	GT	1.7056	AG	1.7819	"[""INTERCHROMOSOMAL[chr17--chr8]""]"	chr17:50189867-chr8:141254178	False			0	Does not meet inclusion criteria	FAIL	26
CHST11--MME	25	0	25.0	0.0	INCL_NON_REF_SPLICE	CHST11^ENSG00000171310.11	chr12:104601991:+	MME^ENSG00000196549.13	chr3:155183570:+	LH00995:25:23T55JLT4:2:1231:21468:5960,LH00995:25:23T55JLT4:2:1245:21816:5890,LH00995:25:23T55JLT4:2:1346:4883:28464,LH00995:25:23T55JLT4:2:1427:9543:2317,LH00995:25:23T55JLT4:2:1443:5280:15643,LH00995:25:23T55JLT4:2:2201:20481:6213,LH00995:25:23T55JLT4:2:2454:43909:25101,LH00995:25:23T55JLT4:5:1129:37429:12196,LH00995:25:23T55JLT4:5:1161:23005:13555,LH00995:25:23T55JLT4:5:1272:13273:15615,LH00995:25:23T55JLT4:5:2144:38772:19314,LH00995:25:23T55JLT4:5:2167:47898:5050,LH00995:25:23T55JLT4:5:2192:18393:25970,LH00995:25:23T55JLT4:5:2314:41361:7404,LH00995:25:23T55JLT4:5:2390:44929:11117,LH00995:25:23T55JLT4:5:2490:13362:12462,LH00995:25:23T55JLT4:6:1357:21678:12098,LH00995:25:23T55JLT4:6:1409:30747:9898,LH00995:25:23T55JLT4:6:1468:11517:27904,LH00995:25:23T55JLT4:6:2274:27746:2233,LH00995:25:23T55JLT4:8:1127:34849:17394,LH00995:25:23T55JLT4:8:1418:38707:23966,LH00995:25:23T55JLT4:8:2293:9179:4461,LH00995:25:23T55JLT4:8:2373:10894:5918,LH00995:25:23T55JLT4:8:2404:28765:12770	.	NO_LDAS	0.0846	GT	1.7056	AG	1.9656	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:104601991-chr3:155183570	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	25
AL033504.1--SASH1	24	0	24.0	0.0	ONLY_REF_SPLICE	AL033504.1^ENSG00000227681.5	chr6:147947519:+	SASH1^ENSG00000111961.18	chr6:148390134:+	LH00995:25:23T55JLT4:2:1124:38837:16484,LH00995:25:23T55JLT4:2:1160:47340:26390,LH00995:25:23T55JLT4:2:1453:38263:13667,LH00995:25:23T55JLT4:2:1456:7990:3606,LH00995:25:23T55JLT4:2:1483:11404:15545,LH00995:25:23T55JLT4:2:2319:40050:14326,LH00995:25:23T55JLT4:2:2362:20545:17338,LH00995:25:23T55JLT4:5:1347:22455:28044,LH00995:25:23T55JLT4:5:1402:11590:12728,LH00995:25:23T55JLT4:5:1489:45495:28856,LH00995:25:23T55JLT4:5:2280:27438:12070,LH00995:25:23T55JLT4:5:2369:46247:8749,LH00995:25:23T55JLT4:5:2440:51991:6367,LH00995:25:23T55JLT4:6:1179:42761:21542,LH00995:25:23T55JLT4:6:1430:27527:6899,LH00995:25:23T55JLT4:6:1454:9551:7908,LH00995:25:23T55JLT4:6:2235:21791:5232,LH00995:25:23T55JLT4:6:2371:2804:23434,LH00995:25:23T55JLT4:6:2479:15020:28506,LH00995:25:23T55JLT4:8:1108:43553:18936,LH00995:25:23T55JLT4:8:1150:37615:20757,LH00995:25:23T55JLT4:8:1487:50179:26769,LH00995:25:23T55JLT4:8:2211:37397:19566,LH00995:25:23T55JLT4:8:2409:38489:28324	.	YES_LDAS	0.0813	GT	1.5329	AG	1.9219	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.32Mb]""]"	chr6:147947519-chr6:148390134	False			1		PASS	24
TMEM123--PPP2R2C	23	0	23.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	PPP2R2C^ENSG00000074211.14	chr4:6381094:-	LH00995:25:23T55JLT4:2:1252:23078:9842,LH00995:25:23T55JLT4:2:1271:36062:28380,LH00995:25:23T55JLT4:2:1412:34307:3004,LH00995:25:23T55JLT4:2:1414:23579:7628,LH00995:25:23T55JLT4:2:2277:31669:16540,LH00995:25:23T55JLT4:2:2284:13151:11902,LH00995:25:23T55JLT4:5:1246:25424:1518,LH00995:25:23T55JLT4:5:1323:3904:25395,LH00995:25:23T55JLT4:5:1461:35253:15825,LH00995:25:23T55JLT4:5:2180:38303:26769,LH00995:25:23T55JLT4:6:1449:2715:9351,LH00995:25:23T55JLT4:6:1486:2715:18908,LH00995:25:23T55JLT4:6:1498:10886:9407,LH00995:25:23T55JLT4:6:2294:30197:9533,LH00995:25:23T55JLT4:6:2386:22447:5946,LH00995:25:23T55JLT4:8:1245:13904:12056,LH00995:25:23T55JLT4:8:2136:37801:15699,LH00995:25:23T55JLT4:8:2146:36628:20141,LH00995:25:23T55JLT4:8:2206:32648:17899,LH00995:25:23T55JLT4:8:2326:31451:19524,LH00995:25:23T55JLT4:8:2342:14793:18557,LH00995:25:23T55JLT4:8:2374:27390:20897,LH00995:25:23T55JLT4:8:2388:35981:6241	.	YES_LDAS	0.0779	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr11--chr4]""]"	chr11:102448812-chr4:6381094	False			1		PASS	23
NONO--KAT6A	21	0	21.0	0.0	INCL_NON_REF_SPLICE	NONO^ENSG00000147140.17	chrX:71290778:+	KAT6A^ENSG00000083168.11	chr8:41933275:-	LH00995:25:23T55JLT4:2:1264:2958:15265,LH00995:25:23T55JLT4:2:2168:22681:3046,LH00995:25:23T55JLT4:2:2174:51296:2639,LH00995:25:23T55JLT4:2:2242:38230:11817,LH00995:25:23T55JLT4:2:2252:33222:14298,LH00995:25:23T55JLT4:5:1104:31702:19819,LH00995:25:23T55JLT4:5:1458:16678:28716,LH00995:25:23T55JLT4:6:1306:47631:18459,LH00995:25:23T55JLT4:6:1359:10926:2808,LH00995:25:23T55JLT4:6:1376:22689:17128,LH00995:25:23T55JLT4:6:1406:15335:6969,LH00995:25:23T55JLT4:6:1421:16436:1897,LH00995:25:23T55JLT4:6:2110:45244:3396,LH00995:25:23T55JLT4:6:2351:21751:22088,LH00995:25:23T55JLT4:6:2434:7949:26993,LH00995:25:23T55JLT4:8:1191:16096:16245,LH00995:25:23T55JLT4:8:1298:47113:18712,LH00995:25:23T55JLT4:8:1460:22697:4363,LH00995:25:23T55JLT4:8:1481:6040:23294,LH00995:25:23T55JLT4:8:2163:33716:22411,LH00995:25:23T55JLT4:8:2446:17981:8665	.	NO_LDAS	0.0711	GC	1.7819	AG	1.4566	"[""INTERCHROMOSOMAL[chrX--chr8]""]"	chrX:71290778-chr8:41933275	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	21
AC239859.5--AC013734.1	21	0	5.04	0.0	INCL_NON_REF_SPLICE	AC239859.5^ENSG00000277702.1	chr1:143419625:-	AC013734.1^ENSG00000277146.1	chrY:26453985:+	LH00995:25:23T55JLT4:2:1184:16468:24765,LH00995:25:23T55JLT4:2:1430:15643:18964,LH00995:25:23T55JLT4:2:1495:23102:28184,LH00995:25:23T55JLT4:2:2246:4430:25353,LH00995:25:23T55JLT4:2:2285:7836:23097,LH00995:25:23T55JLT4:2:2319:4851:17871,LH00995:25:23T55JLT4:2:2402:12358:5120,LH00995:25:23T55JLT4:2:2402:45317:1953,LH00995:25:23T55JLT4:5:1281:17293:1701,LH00995:25:23T55JLT4:5:1384:49127:19734,LH00995:25:23T55JLT4:5:2293:43481:19034,LH00995:25:23T55JLT4:5:2406:32017:14704,LH00995:25:23T55JLT4:6:1278:38918:19426,LH00995:25:23T55JLT4:6:1492:14696:5890,LH00995:25:23T55JLT4:6:2140:25472:18025,LH00995:25:23T55JLT4:6:2307:25327:26096,LH00995:25:23T55JLT4:6:2495:30537:23069,LH00995:25:23T55JLT4:8:1122:29153:16834,LH00995:25:23T55JLT4:8:1463:46984:15909,LH00995:25:23T55JLT4:8:2321:9025:22327,LH00995:25:23T55JLT4:8:2348:51846:26180	.	YES_LDAS	0.0171	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chrY]""]"	chr1:143419625-chrY:26453985	False			0	Does not meet inclusion criteria	FAIL	21
AC104123.1--CAST	21	0	21.0	0.0	ONLY_REF_SPLICE	AC104123.1^ENSG00000251314.2	chr5:96379652:+	CAST^ENSG00000153113.24	chr5:96675539:+	LH00995:25:23T55JLT4:2:1138:37688:1659,LH00995:25:23T55JLT4:2:1260:26168:18137,LH00995:25:23T55JLT4:2:2117:31685:9225,LH00995:25:23T55JLT4:2:2339:31370:25550,LH00995:25:23T55JLT4:2:2389:37259:19692,LH00995:25:23T55JLT4:2:2432:43901:24274,LH00995:25:23T55JLT4:5:1173:30901:29697,LH00995:25:23T55JLT4:5:1205:44484:7852,LH00995:25:23T55JLT4:5:1349:7318:21724,LH00995:25:23T55JLT4:5:1457:27665:25886,LH00995:25:23T55JLT4:5:2301:6566:6913,LH00995:25:23T55JLT4:5:2376:41062:5876,LH00995:25:23T55JLT4:5:2470:32284:1687,LH00995:25:23T55JLT4:6:1113:19842:21080,LH00995:25:23T55JLT4:6:1294:32713:16105,LH00995:25:23T55JLT4:6:1308:14882:24569,LH00995:25:23T55JLT4:6:2467:32858:25746,LH00995:25:23T55JLT4:8:1261:4050:24443,LH00995:25:23T55JLT4:8:1380:7933:24555,LH00995:25:23T55JLT4:8:2124:32147:18964,LH00995:25:23T55JLT4:8:2411:19413:17254	.	YES_LDAS	0.0711	GT	1.7819	AG	1.8295	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.11Mb]""]"	chr5:96379652-chr5:96675539	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	21
TLK2P1--AC110079.1	20	0	20.0	0.0	INCL_NON_REF_SPLICE	TLK2P1^ENSG00000226049.3	chr17:34039043:-	AC110079.1^ENSG00000260404.3	chr4:118595912:+	LH00995:25:23T55JLT4:2:1103:25343:20939,LH00995:25:23T55JLT4:2:1151:28166:29725,LH00995:25:23T55JLT4:2:1496:31839:14592,LH00995:25:23T55JLT4:2:2126:11412:25760,LH00995:25:23T55JLT4:2:2168:11509:15867,LH00995:25:23T55JLT4:2:2385:16808:15965,LH00995:25:23T55JLT4:2:2410:37898:3901,LH00995:25:23T55JLT4:5:1334:2683:23728,LH00995:25:23T55JLT4:5:1351:51781:4237,LH00995:25:23T55JLT4:5:1405:45657:16301,LH00995:25:23T55JLT4:5:2120:27778:5428,LH00995:25:23T55JLT4:5:2173:21047:19188,LH00995:25:23T55JLT4:5:2418:7415:20463,LH00995:25:23T55JLT4:6:1180:24202:17142,LH00995:25:23T55JLT4:6:1232:11088:24807,LH00995:25:23T55JLT4:6:2453:21290:3830,LH00995:25:23T55JLT4:8:1244:37332:19090,LH00995:25:23T55JLT4:8:1409:9147:14662,LH00995:25:23T55JLT4:8:1449:21662:6941,LH00995:25:23T55JLT4:8:2476:23790:15447	.	YES_LDAS	0.0677	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr4]""]"	chr17:34039043-chr4:118595912	False			0	Does not meet inclusion criteria	FAIL	20
AC242842.1--SEC22B2P	20	0	3.33	0.0	ONLY_REF_SPLICE	AC242842.1^ENSG00000275557.1	chr1:149608516:+	SEC22B2P^ENSG00000274423.1	chr1:149351251:+	LH00995:25:23T55JLT4:2:1317:28150:11874,LH00995:25:23T55JLT4:2:2151:2885:15895,LH00995:25:23T55JLT4:2:2194:42995:18922,LH00995:25:23T55JLT4:2:2345:16589:14634,LH00995:25:23T55JLT4:5:2124:22714:12126,LH00995:25:23T55JLT4:5:2151:48658:18726,LH00995:25:23T55JLT4:5:2384:46652:5638,LH00995:25:23T55JLT4:6:1183:3063:24527,LH00995:25:23T55JLT4:6:1415:1801:21500,LH00995:25:23T55JLT4:6:2358:50697:7852,LH00995:25:23T55JLT4:6:2395:48149:28268,LH00995:25:23T55JLT4:6:2492:34792:17100,LH00995:25:23T55JLT4:8:1117:21662:5260,LH00995:25:23T55JLT4:8:1228:46474:25059,LH00995:25:23T55JLT4:8:1284:10352:15993,LH00995:25:23T55JLT4:8:1390:44403:3536,LH00995:25:23T55JLT4:8:2116:37656:14746,LH00995:25:23T55JLT4:8:2147:47663:4979,LH00995:25:23T55JLT4:8:2441:44112:16091,LH00995:25:23T55JLT4:8:2488:19397:21626	.	YES_LDAS	0.0113	GT	1.7819	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.25Mb]""]"	chr1:149608516-chr1:149351251	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	20
TMEM123--DYNC2H1	20	1	20.0	0.69	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	DYNC2H1^ENSG00000187240.16	chr11:103280348:+	LH00995:25:23T55JLT4:2:1311:16687:15587,LH00995:25:23T55JLT4:2:2145:28166:13975,LH00995:25:23T55JLT4:2:2193:24299:13387,LH00995:25:23T55JLT4:2:2193:2974:14312,LH00995:25:23T55JLT4:2:2247:47857:28941,LH00995:25:23T55JLT4:2:2291:16209:3494,LH00995:25:23T55JLT4:5:1185:36823:14760,LH00995:25:23T55JLT4:5:1376:50851:9463,LH00995:25:23T55JLT4:5:2107:36054:12532,LH00995:25:23T55JLT4:5:2422:43084:7642,LH00995:25:23T55JLT4:5:2466:31540:24190,LH00995:25:23T55JLT4:6:1142:10012:20197,LH00995:25:23T55JLT4:6:1325:34727:17661,LH00995:25:23T55JLT4:6:1392:18741:3424,LH00995:25:23T55JLT4:6:2137:43230:22383,LH00995:25:23T55JLT4:6:2247:34792:6871,LH00995:25:23T55JLT4:8:1343:17940:21878,LH00995:25:23T55JLT4:8:1478:20311:9533,LH00995:25:23T55JLT4:8:2159:26791:10697,LH00995:25:23T55JLT4:8:2449:7334:11579	LH00995:25:23T55JLT4:8:1417:39290:13625	YES_LDAS	0.07	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr11:0.64Mb]""]"	chr11:102448812-chr11:103280348	False			1		PASS	21
SAMD5--SASH1	19	0	19.0	0.0	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	SASH1^ENSG00000111961.18	chr6:148390134:+	LH00995:25:23T55JLT4:2:1316:41604:17044,LH00995:25:23T55JLT4:2:2192:7593:4825,LH00995:25:23T55JLT4:2:2226:7237:9898,LH00995:25:23T55JLT4:2:2434:16339:26755,LH00995:25:23T55JLT4:5:1393:26742:20645,LH00995:25:23T55JLT4:5:1401:51085:24919,LH00995:25:23T55JLT4:5:1489:44815:23924,LH00995:25:23T55JLT4:5:2188:6178:26138,LH00995:25:23T55JLT4:5:2247:29808:8917,LH00995:25:23T55JLT4:5:2328:25092:5736,LH00995:25:23T55JLT4:6:1121:34590:22523,LH00995:25:23T55JLT4:6:1161:12617:24513,LH00995:25:23T55JLT4:6:1161:23531:8048,LH00995:25:23T55JLT4:6:1190:16015:3774,LH00995:25:23T55JLT4:6:1235:19259:8272,LH00995:25:23T55JLT4:6:2368:46393:22649,LH00995:25:23T55JLT4:8:2271:25456:8889,LH00995:25:23T55JLT4:8:2467:10239:13779,LH00995:25:23T55JLT4:8:2496:14996:14452	.	YES_LDAS	0.0643	GT	1.8295	AG	1.9219	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]"	chr6:147509387-chr6:148390134	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	19
RPS3AP11--SEPTIN7	19	0	6.33	0.0	INCL_NON_REF_SPLICE	RPS3AP11^ENSG00000230116.1	chr1:42491744:+	SEPTIN7^ENSG00000122545.20	chr7:35832798:+	LH00995:25:23T55JLT4:2:1325:28943:15489,LH00995:25:23T55JLT4:2:2153:28514:24667,LH00995:25:23T55JLT4:2:2438:10684:21808,LH00995:25:23T55JLT4:5:1145:40083:19370,LH00995:25:23T55JLT4:5:1265:22123:16203,LH00995:25:23T55JLT4:5:2185:33166:17478,LH00995:25:23T55JLT4:5:2189:43384:16063,LH00995:25:23T55JLT4:5:2216:47194:10080,LH00995:25:23T55JLT4:5:2218:46935:21794,LH00995:25:23T55JLT4:5:2283:25521:28898,LH00995:25:23T55JLT4:5:2422:25230:2808,LH00995:25:23T55JLT4:6:1329:51182:5274,LH00995:25:23T55JLT4:6:1434:10295:19538,LH00995:25:23T55JLT4:6:2330:18361:23868,LH00995:25:23T55JLT4:8:1227:2796:11005,LH00995:25:23T55JLT4:8:1446:44184:13975,LH00995:25:23T55JLT4:8:2221:20295:26853,LH00995:25:23T55JLT4:8:2336:8208:3957,LH00995:25:23T55JLT4:8:2417:38942:15461	.	NO_LDAS	0.0214	GT	1.9329	AG	1.7968	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:42491744-chr7:35832798	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	19
CPSF6--GRM8	19	0	19.0	0.0	INCL_NON_REF_SPLICE	CPSF6^ENSG00000111605.18	chr12:69262562:+	GRM8^ENSG00000179603.18	chr7:126445313:-	LH00995:25:23T55JLT4:2:1130:35868:10164,LH00995:25:23T55JLT4:2:1142:16355:19272,LH00995:25:23T55JLT4:2:1363:20732:8272,LH00995:25:23T55JLT4:2:1405:3071:29277,LH00995:25:23T55JLT4:2:1426:28894:12462,LH00995:25:23T55JLT4:2:1468:16371:12882,LH00995:25:23T55JLT4:2:1475:15433:15741,LH00995:25:23T55JLT4:2:2126:18029:16624,LH00995:25:23T55JLT4:2:2164:16824:20449,LH00995:25:23T55JLT4:5:2183:44904:11579,LH00995:25:23T55JLT4:5:2193:23442:12182,LH00995:25:23T55JLT4:5:2266:3023:2457,LH00995:25:23T55JLT4:6:1165:27187:22929,LH00995:25:23T55JLT4:6:1166:31653:7067,LH00995:25:23T55JLT4:6:1287:50252:1140,LH00995:25:23T55JLT4:6:1495:10546:21962,LH00995:25:23T55JLT4:6:2168:43731:2373,LH00995:25:23T55JLT4:6:2306:42558:20183,LH00995:25:23T55JLT4:8:1257:5692:25578	.	NO_LDAS	0.0643	GT	1.9899	AG	1.8256	"[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr12--chr7]""]"	chr12:69262562-chr7:126445313	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	19
SRGAP2--FCGR1B	18	1	6.0	0.25	ONLY_REF_SPLICE	SRGAP2^ENSG00000266028.7	chr1:206343008:+	FCGR1B^ENSG00000198019.13	chr1:121092996:+	LH00995:25:23T55JLT4:2:1295:4940:26853,LH00995:25:23T55JLT4:2:1453:24243:21556,LH00995:25:23T55JLT4:2:2142:51514:1168,LH00995:25:23T55JLT4:2:2331:12714:17899,LH00995:25:23T55JLT4:2:2433:3395:13303,LH00995:25:23T55JLT4:5:2120:46223:28296,LH00995:25:23T55JLT4:5:2324:11744:4531,LH00995:25:23T55JLT4:5:2455:4592:16890,LH00995:25:23T55JLT4:5:2462:39177:3284,LH00995:25:23T55JLT4:6:1247:29088:1589,LH00995:25:23T55JLT4:6:1323:12973:9800,LH00995:25:23T55JLT4:6:1355:18555:21374,LH00995:25:23T55JLT4:6:2104:18693:6871,LH00995:25:23T55JLT4:6:2438:33878:1280,LH00995:25:23T55JLT4:8:1130:40584:20183,LH00995:25:23T55JLT4:8:1281:39646:14354,LH00995:25:23T55JLT4:8:1385:41846:7292,LH00995:25:23T55JLT4:8:1387:24979:14564	LH00995:25:23T55JLT4:5:1342:4171:29417	YES_LDAS	0.0211	GT	1.7968	AG	1.9329	"[""INTRACHROMOSOMAL[chr1:85.11Mb]""]"	chr1:206343008-chr1:121092996	False			1		PASS	19
TMEM123--PDGFD	17	0	17.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	PDGFD^ENSG00000170962.13	chr11:104000237:-	LH00995:25:23T55JLT4:2:1162:47695:18039,LH00995:25:23T55JLT4:2:1172:50187:21206,LH00995:25:23T55JLT4:2:2210:45244:9477,LH00995:25:23T55JLT4:5:1365:14526:6941,LH00995:25:23T55JLT4:5:2277:37381:9758,LH00995:25:23T55JLT4:6:1271:14462:13667,LH00995:25:23T55JLT4:6:1276:51967:18768,LH00995:25:23T55JLT4:6:1391:10967:14788,LH00995:25:23T55JLT4:6:1491:10732:10935,LH00995:25:23T55JLT4:6:2156:4576:13919,LH00995:25:23T55JLT4:6:2333:26354:24989,LH00995:25:23T55JLT4:6:2365:12706:13149,LH00995:25:23T55JLT4:6:2471:5053:13429,LH00995:25:23T55JLT4:8:1174:23781:23392,LH00995:25:23T55JLT4:8:2113:45390:26012,LH00995:25:23T55JLT4:8:2144:42324:7922,LH00995:25:23T55JLT4:8:2251:11331:28114	.	YES_LDAS	0.0576	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr11:1.44Mb]""]"	chr11:102448812-chr11:104000237	False			1		PASS	17
TLR4--AL160272.1	17	0	17.0	0.0	ONLY_REF_SPLICE	TLR4^ENSG00000136869.16	chr9:117704565:+	AL160272.1^ENSG00000284977.2	chr9:117848065:+	LH00995:25:23T55JLT4:2:1115:11938:9099,LH00995:25:23T55JLT4:2:1248:22471:8146,LH00995:25:23T55JLT4:2:2131:24186:4055,LH00995:25:23T55JLT4:2:2327:25270:29249,LH00995:25:23T55JLT4:2:2337:11234:13793,LH00995:25:23T55JLT4:5:1184:44686:19552,LH00995:25:23T55JLT4:5:2108:18782:3859,LH00995:25:23T55JLT4:5:2196:45139:20925,LH00995:25:23T55JLT4:5:2215:24615:8048,LH00995:25:23T55JLT4:5:2360:5789:28632,LH00995:25:23T55JLT4:5:2405:49241:2583,LH00995:25:23T55JLT4:6:2263:33028:27553,LH00995:25:23T55JLT4:6:2358:36103:21080,LH00995:25:23T55JLT4:6:2475:22107:23378,LH00995:25:23T55JLT4:8:1321:12391:4363,LH00995:25:23T55JLT4:8:1402:17714:28100,LH00995:25:23T55JLT4:8:2195:21427:20323	.	YES_LDAS	0.0576	GT	1.7968	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[34720]""]"	chr9:117704565-chr9:117848065	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	17
PTPRM--TTC39C	17	0	17.0	0.0	ONLY_REF_SPLICE	PTPRM^ENSG00000173482.17	chr18:7567891:+	TTC39C^ENSG00000168234.13	chr18:24064140:+	LH00995:25:23T55JLT4:2:1193:6477:1659,LH00995:25:23T55JLT4:2:1275:33125:9113,LH00995:25:23T55JLT4:2:1309:10126:23167,LH00995:25:23T55JLT4:2:1327:4729:16203,LH00995:25:23T55JLT4:2:2239:34557:2401,LH00995:25:23T55JLT4:2:2309:37866:13037,LH00995:25:23T55JLT4:2:2349:42130:17198,LH00995:25:23T55JLT4:5:1236:39905:29263,LH00995:25:23T55JLT4:5:1473:30529:13275,LH00995:25:23T55JLT4:5:2148:24841:6030,LH00995:25:23T55JLT4:5:2148:50244:17661,LH00995:25:23T55JLT4:5:2281:50090:6100,LH00995:25:23T55JLT4:6:1265:13839:11747,LH00995:25:23T55JLT4:6:2142:19316:16414,LH00995:25:23T55JLT4:6:2398:28846:5960,LH00995:25:23T55JLT4:8:2314:42041:18277,LH00995:25:23T55JLT4:8:2434:4762:13317	.	YES_LDAS	0.0576	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr18:15.59Mb]""]"	chr18:7567891-chr18:24064140	False			1		PASS	17
PKNOX2--MEIS3	16	0	16.0	0.0	ONLY_REF_SPLICE	PKNOX2^ENSG00000165495.16	chr11:125385722:+	MEIS3^ENSG00000105419.18	chr19:47417350:-	LH00995:25:23T55JLT4:2:1205:33311:21318,LH00995:25:23T55JLT4:2:2387:39881:27567,LH00995:25:23T55JLT4:2:2403:14931:15853,LH00995:25:23T55JLT4:2:2405:33724:13569,LH00995:25:23T55JLT4:5:1322:37348:6143,LH00995:25:23T55JLT4:5:1434:30448:9463,LH00995:25:23T55JLT4:5:2491:21168:27049,LH00995:25:23T55JLT4:6:1128:9446:27231,LH00995:25:23T55JLT4:6:1129:40479:21178,LH00995:25:23T55JLT4:6:1283:47234:9702,LH00995:25:23T55JLT4:6:2303:23045:7768,LH00995:25:23T55JLT4:6:2358:43828:28492,LH00995:25:23T55JLT4:8:1464:4697:26769,LH00995:25:23T55JLT4:8:2225:11994:29431,LH00995:25:23T55JLT4:8:2369:37834:19762,LH00995:25:23T55JLT4:8:2386:13693:2667	.	NO_LDAS	0.0542	GT	1.9656	AG	1.9656	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]"	chr11:125385722-chr19:47417350	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	16
YAF2--RYBP	15	0	15.0	0.0	INCL_NON_REF_SPLICE	YAF2^ENSG00000015153.15	chr12:42238155:-	RYBP^ENSG00000163602.11	chr3:72446621:-	LH00995:25:23T55JLT4:2:1182:15335:23840,LH00995:25:23T55JLT4:2:2106:46150:6507,LH00995:25:23T55JLT4:2:2404:43950:4321,LH00995:25:23T55JLT4:5:1118:10975:19819,LH00995:25:23T55JLT4:5:1224:36709:12770,LH00995:25:23T55JLT4:5:1236:32430:26516,LH00995:25:23T55JLT4:5:1465:2505:21486,LH00995:25:23T55JLT4:5:2283:32349:26124,LH00995:25:23T55JLT4:5:2410:21848:19594,LH00995:25:23T55JLT4:6:1342:26799:23602,LH00995:25:23T55JLT4:6:2195:46102:17717,LH00995:25:23T55JLT4:6:2212:27082:13779,LH00995:25:23T55JLT4:6:2287:12981:2724,LH00995:25:23T55JLT4:6:2484:9697:12672,LH00995:25:23T55JLT4:8:1368:41960:10991	.	YES_LDAS	0.0508	GT	1.5656	AG	1.4566	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:42238155-chr3:72446621	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	15
EWSR1--IGH@-ext	15	0	15.0	0.0	INCL_NON_REF_SPLICE	EWSR1^ENSG00000182944.18	chr22:29287118:+	IGH@-ext^IGH.g@-ext	chr14:106679373:-	LH00995:25:23T55JLT4:2:1310:36208:26390,LH00995:25:23T55JLT4:2:1398:12237:20099,LH00995:25:23T55JLT4:2:1427:48318:19875,LH00995:25:23T55JLT4:2:1484:3039:3494,LH00995:25:23T55JLT4:2:2256:11517:2794,LH00995:25:23T55JLT4:2:2419:36920:23195,LH00995:25:23T55JLT4:5:1384:38805:4461,LH00995:25:23T55JLT4:5:1432:29946:25437,LH00995:25:23T55JLT4:5:2469:4131:27862,LH00995:25:23T55JLT4:6:2420:31572:18081,LH00995:25:23T55JLT4:8:1144:3184:21962,LH00995:25:23T55JLT4:8:1183:24429:18431,LH00995:25:23T55JLT4:8:1320:32624:14438,LH00995:25:23T55JLT4:8:2262:21816:6451,LH00995:25:23T55JLT4:8:2335:47024:13261	.	NO_LDAS	0.0508	AG	1.5656	TC	1.7465	"[""INTERCHROMOSOMAL[chr22--chr14]""]"	chr22:29287118-chr14:106679373	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	15
AC008740.1--CRYM-AS1	15	0	15.0	0.0	INCL_NON_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21338921:+	LH00995:25:23T55JLT4:2:2119:36863:4433,LH00995:25:23T55JLT4:2:2197:18660:29151,LH00995:25:23T55JLT4:2:2394:19162:7768,LH00995:25:23T55JLT4:5:1473:11533:21318,LH00995:25:23T55JLT4:5:2115:24574:9267,LH00995:25:23T55JLT4:5:2349:28004:27371,LH00995:25:23T55JLT4:6:1363:34792:10458,LH00995:25:23T55JLT4:6:1461:42874:14144,LH00995:25:23T55JLT4:6:2405:4244:19790,LH00995:25:23T55JLT4:8:1132:43222:19118,LH00995:25:23T55JLT4:8:1225:6315:23266,LH00995:25:23T55JLT4:8:1238:44921:4489,LH00995:25:23T55JLT4:8:1465:48933:28198,LH00995:25:23T55JLT4:8:2382:28611:10010,LH00995:25:23T55JLT4:8:2475:51668:9085	.	YES_LDAS	0.0508	GT	1.7232	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"	chr16:21352138-chr16:21338921	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	15
TRIM58--OR2W3	14	0	14.0	0.0	INCL_NON_REF_SPLICE	TRIM58^ENSG00000162722.9	chr1:247868063:+	OR2W3^ENSG00000238243.3	chr1:247895557:+	LH00995:25:23T55JLT4:2:1274:25238:10725,LH00995:25:23T55JLT4:2:1344:19275:14298,LH00995:25:23T55JLT4:2:1473:20667:8441,LH00995:25:23T55JLT4:2:2113:32753:22117,LH00995:25:23T55JLT4:2:2389:24008:21318,LH00995:25:23T55JLT4:5:1114:51239:19160,LH00995:25:23T55JLT4:5:1428:6477:13205,LH00995:25:23T55JLT4:5:1477:11735:21304,LH00995:25:23T55JLT4:5:2162:41757:5064,LH00995:25:23T55JLT4:5:2260:2311:22103,LH00995:25:23T55JLT4:6:1446:41466:23924,LH00995:25:23T55JLT4:6:2497:28312:12938,LH00995:25:23T55JLT4:8:1434:16233:8356,LH00995:25:23T55JLT4:8:2256:45819:20001	.	YES_LDAS	0.0474	GT	1.8892	AG	1.6729	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[15449]""]"	chr1:247868063-chr1:247895557	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	14
PTPN2--NPIPB3	14	0	6.96	0.0	ONLY_REF_SPLICE	PTPN2^ENSG00000175354.20	chr18:12869025:-	NPIPB3^ENSG00000169246.16	chr16:21406859:-	LH00995:25:23T55JLT4:2:1188:5110:25353,LH00995:25:23T55JLT4:2:1232:31402:9576,LH00995:25:23T55JLT4:2:1273:36467:22355,LH00995:25:23T55JLT4:2:1439:12763:4587,LH00995:25:23T55JLT4:5:1255:2327:2345,LH00995:25:23T55JLT4:5:2243:46992:29375,LH00995:25:23T55JLT4:5:2294:15586:5190,LH00995:25:23T55JLT4:5:2401:50066:14858,LH00995:25:23T55JLT4:6:1152:36912:3088,LH00995:25:23T55JLT4:6:1423:7472:25269,LH00995:25:23T55JLT4:6:2396:3508:15685,LH00995:25:23T55JLT4:6:2470:13451:12896,LH00995:25:23T55JLT4:8:2138:27754:8945,LH00995:25:23T55JLT4:8:2250:13548:7011	.	YES_LDAS	0.0236	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr18--chr16]""]"	chr18:12869025-chr16:21406859	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	14
NSF--LRRC37A3	14	0	13.75	0.0	ONLY_REF_SPLICE	NSF^ENSG00000073969.18	chr17:46704854:+	LRRC37A3^ENSG00000176809.10	chr17:64892600:-	LH00995:25:23T55JLT4:2:1240:11218:20996,LH00995:25:23T55JLT4:2:2106:4802:4027,LH00995:25:23T55JLT4:2:2186:1922:13779,LH00995:25:23T55JLT4:2:2262:6170:6871,LH00995:25:23T55JLT4:2:2324:13895:18095,LH00995:25:23T55JLT4:5:1186:23927:26614,LH00995:25:23T55JLT4:5:1295:31394:28422,LH00995:25:23T55JLT4:5:2183:33902:2051,LH00995:25:23T55JLT4:5:2189:33522:18319,LH00995:25:23T55JLT4:5:2217:48464:27637,LH00995:25:23T55JLT4:6:1444:49419:8973,LH00995:25:23T55JLT4:6:1493:39775:1967,LH00995:25:23T55JLT4:8:1108:8952:1238,LH00995:25:23T55JLT4:8:2126:38796:3046	.	YES_LDAS	0.0466	GT	1.6729	AG	1.7232	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr17:18.10Mb]""]"	chr17:46704854-chr17:64892600	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	14
LILRB1--LILRA5	14	0	13.64	0.0	ONLY_REF_SPLICE	LILRB1^ENSG00000104972.15	chr19:54631107:+	LILRA5^ENSG00000187116.14	chr19:54312370:-	LH00995:25:23T55JLT4:2:1189:6283:13625,LH00995:25:23T55JLT4:2:1196:47606:13121,LH00995:25:23T55JLT4:2:1234:37551:20477,LH00995:25:23T55JLT4:5:1154:26686:25704,LH00995:25:23T55JLT4:5:2162:3273:17689,LH00995:25:23T55JLT4:5:2182:18127:10570,LH00995:25:23T55JLT4:5:2219:22390:3550,LH00995:25:23T55JLT4:5:2261:43246:12714,LH00995:25:23T55JLT4:5:2307:1615:21794,LH00995:25:23T55JLT4:5:2318:4770:18824,LH00995:25:23T55JLT4:5:2419:6792:11089,LH00995:25:23T55JLT4:5:2465:3581:27021,LH00995:25:23T55JLT4:6:1226:1963:21388,LH00995:25:23T55JLT4:8:1257:20012:6997	.	YES_LDAS	0.0462	GT	1.7819	AG	1.7465	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]"	chr19:54631107-chr19:54312370	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	14
CCDC198--NPIPB3	14	0	6.96	0.0	ONLY_REF_SPLICE	CCDC198^ENSG00000100557.10	chr14:57475582:-	NPIPB3^ENSG00000169246.16	chr16:21406859:-	LH00995:25:23T55JLT4:2:1188:5110:25353,LH00995:25:23T55JLT4:2:1232:31402:9576,LH00995:25:23T55JLT4:2:1273:36467:22355,LH00995:25:23T55JLT4:2:1439:12763:4587,LH00995:25:23T55JLT4:5:1255:2327:2345,LH00995:25:23T55JLT4:5:2243:46992:29375,LH00995:25:23T55JLT4:5:2294:15586:5190,LH00995:25:23T55JLT4:5:2401:50066:14858,LH00995:25:23T55JLT4:6:1152:36912:3088,LH00995:25:23T55JLT4:6:1423:7472:25269,LH00995:25:23T55JLT4:6:2396:3508:15685,LH00995:25:23T55JLT4:6:2470:13451:12896,LH00995:25:23T55JLT4:8:2138:27754:8945,LH00995:25:23T55JLT4:8:2250:13548:7011	.	YES_LDAS	0.0236	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr14--chr16]""]"	chr14:57475582-chr16:21406859	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	14
APLP2--CERS3	13	0	13.0	0.0	INCL_NON_REF_SPLICE	APLP2^ENSG00000084234.18	chr11:130121799:+	CERS3^ENSG00000154227.14	chr15:100402823:-	LH00995:25:23T55JLT4:2:1254:25577:8202,LH00995:25:23T55JLT4:2:2210:50284:20673,LH00995:25:23T55JLT4:2:2358:50122:2906,LH00995:25:23T55JLT4:2:2409:4390:21696,LH00995:25:23T55JLT4:5:1214:34412:23532,LH00995:25:23T55JLT4:5:2462:23781:29249,LH00995:25:23T55JLT4:6:1430:38101:13779,LH00995:25:23T55JLT4:6:2232:15756:23448,LH00995:25:23T55JLT4:6:2252:13984:3508,LH00995:25:23T55JLT4:6:2326:38651:17759,LH00995:25:23T55JLT4:6:2376:49936:24330,LH00995:25:23T55JLT4:6:2440:9794:3284,LH00995:25:23T55JLT4:8:2205:44071:18291	.	NO_LDAS	0.044	GT	1.7819	AG	0.9968	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:130121799-chr15:100402823	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	13
AP001347.1--ANKRD20A11P	13	0	13.0	0.0	ONLY_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13970110:-	LH00995:25:23T55JLT4:2:1158:48828:15265,LH00995:25:23T55JLT4:2:1256:30577:4391,LH00995:25:23T55JLT4:2:2175:43707:26993,LH00995:25:23T55JLT4:2:2386:50600:3396,LH00995:25:23T55JLT4:5:2127:11533:22467,LH00995:25:23T55JLT4:6:1163:1752:17605,LH00995:25:23T55JLT4:6:1418:9381:24344,LH00995:25:23T55JLT4:6:2254:43974:10108,LH00995:25:23T55JLT4:6:2379:32616:20113,LH00995:25:23T55JLT4:8:1282:39824:1490,LH00995:25:23T55JLT4:8:1354:32786:26292,LH00995:25:23T55JLT4:8:1436:13127:25395,LH00995:25:23T55JLT4:8:2341:6364:11944	.	YES_LDAS	0.044	GT	1.8323	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13970110	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	13
PDCD1LG2--DYNC2H1	13	2	13.0	0.59	ONLY_REF_SPLICE	PDCD1LG2^ENSG00000197646.8	chr9:5535050:+	DYNC2H1^ENSG00000187240.16	chr11:103113537:+	LH00995:25:23T55JLT4:2:1204:8969:21416,LH00995:25:23T55JLT4:2:1452:10481:9295,LH00995:25:23T55JLT4:2:2133:29582:12252,LH00995:25:23T55JLT4:2:2154:23288:3760,LH00995:25:23T55JLT4:2:2290:4236:29109,LH00995:25:23T55JLT4:5:2271:42510:1294,LH00995:25:23T55JLT4:5:2445:45843:2611,LH00995:25:23T55JLT4:5:2489:1372:12350,LH00995:25:23T55JLT4:6:1323:21864:13121,LH00995:25:23T55JLT4:6:1412:39816:24148,LH00995:25:23T55JLT4:6:2242:45600:23322,LH00995:25:23T55JLT4:6:2469:9972:28310,LH00995:25:23T55JLT4:8:1159:18094:15026	LH00995:25:23T55JLT4:8:1496:15158:26166,LH00995:25:23T55JLT4:8:2334:1073:1743	YES_LDAS	0.046	GT	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:5535050-chr11:103113537	False			1		PASS	15
TPTE--BAGE2	12	0	6.0	0.0	ONLY_REF_SPLICE	TPTE^ENSG00000274391.5	chr21:10527412:+	BAGE2^ENSG00000187172.15	chr21:10514122:+	LH00995:25:23T55JLT4:2:1119:12908:5764,LH00995:25:23T55JLT4:2:1319:24154:11173,LH00995:25:23T55JLT4:2:2104:32203:26432,LH00995:25:23T55JLT4:5:1137:3152:29053,LH00995:25:23T55JLT4:5:1210:13103:8090,LH00995:25:23T55JLT4:5:1451:42469:23588,LH00995:25:23T55JLT4:5:2276:18499:21052,LH00995:25:23T55JLT4:5:2291:24145:20379,LH00995:25:23T55JLT4:6:1420:11379:6563,LH00995:25:23T55JLT4:8:2412:27964:23546,LH00995:25:23T55JLT4:8:2446:40317:27679,LH00995:25:23T55JLT4:8:2467:3888:17997	.	YES_LDAS	0.0203	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5122]""]"	chr21:10527412-chr21:10514122	False			1		PASS	12
TMED3--MINAR1	12	0	12.0	0.0	ONLY_REF_SPLICE	TMED3^ENSG00000166557.14	chr15:79314005:+	MINAR1^ENSG00000169330.9	chr15:79456098:+	LH00995:25:23T55JLT4:2:1132:35358:4517,LH00995:25:23T55JLT4:5:1124:42510:8861,LH00995:25:23T55JLT4:5:2190:40779:12140,LH00995:25:23T55JLT4:6:1145:51692:4419,LH00995:25:23T55JLT4:6:1208:46110:12966,LH00995:25:23T55JLT4:6:1248:11032:8286,LH00995:25:23T55JLT4:6:2127:30739:13555,LH00995:25:23T55JLT4:8:1105:49427:12042,LH00995:25:23T55JLT4:8:1132:2408:12798,LH00995:25:23T55JLT4:8:1310:18426:27595,LH00995:25:23T55JLT4:8:2133:10595:17142,LH00995:25:23T55JLT4:8:2450:28943:24653	.	YES_LDAS	0.0406	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]"	chr15:79314005-chr15:79456098	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	12
PRKCA--ZNF585A	12	0	12.0	0.0	INCL_NON_REF_SPLICE	PRKCA^ENSG00000154229.12	chr17:66496283:+	ZNF585A^ENSG00000196967.11	chr19:37146612:-	LH00995:25:23T55JLT4:2:1103:48731:4279,LH00995:25:23T55JLT4:2:1135:29056:10360,LH00995:25:23T55JLT4:2:1272:44168:5736,LH00995:25:23T55JLT4:2:2344:14769:2485,LH00995:25:23T55JLT4:5:1439:38546:5554,LH00995:25:23T55JLT4:5:2361:47615:6157,LH00995:25:23T55JLT4:5:2388:7820:12168,LH00995:25:23T55JLT4:6:1128:14526:14256,LH00995:25:23T55JLT4:6:1213:11266:7376,LH00995:25:23T55JLT4:6:1343:12447:21332,LH00995:25:23T55JLT4:6:2410:14664:18221,LH00995:25:23T55JLT4:8:2305:3856:28814	.	NO_LDAS	0.0406	GT	1.9329	AG	1.5656	"[""INTERCHROMOSOMAL[chr17--chr19]""]"	chr17:66496283-chr19:37146612	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	12
EWSR1--IGH@-ext	11	0	11.0	0.0	INCL_NON_REF_SPLICE	EWSR1^ENSG00000182944.18	chr22:29287133:+	IGH@-ext^IGH.g@-ext	chr14:106679374:-	LH00995:25:23T55JLT4:2:1413:24501:12056,LH00995:25:23T55JLT4:2:1440:20303:9127,LH00995:25:23T55JLT4:2:2234:1186:15503,LH00995:25:23T55JLT4:5:1458:3654:24232,LH00995:25:23T55JLT4:5:2483:5668:27974,LH00995:25:23T55JLT4:6:1121:32737:12308,LH00995:25:23T55JLT4:6:1179:19000:8945,LH00995:25:23T55JLT4:6:2346:10336:25437,LH00995:25:23T55JLT4:6:2413:8944:23728,LH00995:25:23T55JLT4:8:2227:23790:20071,LH00995:25:23T55JLT4:8:2351:48043:11944	.	NO_LDAS	0.0372	AG	1.8062	CT	1.7465	"[""INTERCHROMOSOMAL[chr22--chr14]""]"	chr22:29287133-chr14:106679374	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	11
TMEFF2--TEX41	10	0	10.0	0.0	ONLY_REF_SPLICE	TMEFF2^ENSG00000144339.12	chr2:191998262:-	TEX41^ENSG00000226674.11	chr2:144667969:+	LH00995:25:23T55JLT4:2:1431:45916:27567,LH00995:25:23T55JLT4:2:1492:35156:9379,LH00995:25:23T55JLT4:2:2104:15845:28254,LH00995:25:23T55JLT4:5:1240:32721:20043,LH00995:25:23T55JLT4:5:1459:6307:5876,LH00995:25:23T55JLT4:5:1486:42647:16470,LH00995:25:23T55JLT4:6:1455:15821:10388,LH00995:25:23T55JLT4:6:2137:7909:6857,LH00995:25:23T55JLT4:8:1384:4438:26404,LH00995:25:23T55JLT4:8:2385:7804:26404	.	YES_LDAS	0.0339	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr2:46.69Mb]""]"	chr2:191998262-chr2:144667969	False			1		PASS	10
SNU13--LLPH	10	0	10.0	0.0	ONLY_REF_SPLICE	SNU13^ENSG00000100138.15	chr22:41680244:-	LLPH^ENSG00000139233.7	chr12:66129113:-	LH00995:25:23T55JLT4:5:1436:26880:2639,LH00995:25:23T55JLT4:5:1448:23676:21808,LH00995:25:23T55JLT4:5:2248:21306:15685,LH00995:25:23T55JLT4:6:2146:5199:18389,LH00995:25:23T55JLT4:6:2212:35188:1252,LH00995:25:23T55JLT4:8:1108:22220:18221,LH00995:25:23T55JLT4:8:1356:41070:3228,LH00995:25:23T55JLT4:8:2365:43610:27077,LH00995:25:23T55JLT4:8:2374:11485:26054,LH00995:25:23T55JLT4:8:2496:22390:28212	.	YES_LDAS	0.0339	GT	1.7056	AG	1.8295	"[""INTERCHROMOSOMAL[chr22--chr12]""]"	chr22:41680244-chr12:66129113	False			1		PASS	10
MAP3K20--RAPGEF4	10	0	10.0	0.0	ONLY_REF_SPLICE	MAP3K20^ENSG00000091436.17	chr2:173091190:+	RAPGEF4^ENSG00000091428.18	chr2:172917802:+	LH00995:25:23T55JLT4:2:1109:44023:12294,LH00995:25:23T55JLT4:2:1240:40148:15251,LH00995:25:23T55JLT4:2:2184:11598:16862,LH00995:25:23T55JLT4:6:1179:26176:18515,LH00995:25:23T55JLT4:6:2176:48343:28100,LH00995:25:23T55JLT4:6:2224:36014:14816,LH00995:25:23T55JLT4:6:2236:34476:11621,LH00995:25:23T55JLT4:8:1324:13289:13877,LH00995:25:23T55JLT4:8:1412:25966:7838,LH00995:25:23T55JLT4:8:1434:22131:25942	.	YES_LDAS	0.0339	GT	1.1589	AG	1.7968	"[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22542]""]"	chr2:173091190-chr2:172917802	False			1		PASS	10
HIC2--PI4KA	10	0	10.0	0.0	ONLY_REF_SPLICE	HIC2^ENSG00000169635.10	chr22:21442857:+	PI4KA^ENSG00000241973.11	chr22:20733843:-	LH00995:25:23T55JLT4:2:1131:39525:10220,LH00995:25:23T55JLT4:2:1447:45066:9113,LH00995:25:23T55JLT4:5:1460:46895:2864,LH00995:25:23T55JLT4:6:2274:42833:28086,LH00995:25:23T55JLT4:8:1196:26993:10991,LH00995:25:23T55JLT4:8:1266:12108:17969,LH00995:25:23T55JLT4:8:2294:27333:28955,LH00995:25:23T55JLT4:8:2332:51287:17675,LH00995:25:23T55JLT4:8:2340:14624:8398,LH00995:25:23T55JLT4:8:2420:44370:23518	.	YES_LDAS	0.0339	GT	1.7465	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr22:0.56Mb]""]"	chr22:21442857-chr22:20733843	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
GRAMD1A--RAB11FIP3	10	0	0.56	0.0	INCL_NON_REF_SPLICE	GRAMD1A^ENSG00000089351.15	chr19:35000449:+	RAB11FIP3^ENSG00000090565.17	chr16:426178:+	LH00995:25:23T55JLT4:2:1303:14915:26222,LH00995:25:23T55JLT4:2:1468:19615:8469,LH00995:25:23T55JLT4:5:1132:20691:2569,LH00995:25:23T55JLT4:5:1384:30278:29011,LH00995:25:23T55JLT4:5:2443:10490:5610,LH00995:25:23T55JLT4:6:1219:17528:15054,LH00995:25:23T55JLT4:6:1278:11056:9702,LH00995:25:23T55JLT4:6:1371:37486:27091,LH00995:25:23T55JLT4:6:2473:25286:22999,LH00995:25:23T55JLT4:8:2447:4940:24134	.	NO_LDAS	0.0019	GC	1.371	AG	1.2729	"[""INTERCHROMOSOMAL[chr19--chr16]""]"	chr19:35000449-chr16:426178	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	10
FLG-AS1--ARHGAP32	10	0	10.0	0.0	ONLY_REF_SPLICE	FLG-AS1^ENSG00000237975.7	chr1:152251758:+	ARHGAP32^ENSG00000134909.18	chr11:128998468:-	LH00995:25:23T55JLT4:2:1208:27511:20519,LH00995:25:23T55JLT4:2:2219:34298:14984,LH00995:25:23T55JLT4:5:1214:23328:7698,LH00995:25:23T55JLT4:5:1370:10441:1967,LH00995:25:23T55JLT4:5:2278:7626:1659,LH00995:25:23T55JLT4:5:2335:11201:16119,LH00995:25:23T55JLT4:6:1160:46304:26558,LH00995:25:23T55JLT4:6:2237:8241:25984,LH00995:25:23T55JLT4:6:2275:15238:10584,LH00995:25:23T55JLT4:8:1216:31588:19790	.	YES_LDAS	0.0339	GT	1.8256	AG	1.9219	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:152251758-chr11:128998468	False			1		PASS	10
EIF4H--COL1A2	10	0	10.0	0.0	INCL_NON_REF_SPLICE	EIF4H^ENSG00000106682.16	chr7:74195439:+	COL1A2^ENSG00000164692.18	chr7:94412068:+	LH00995:25:23T55JLT4:2:1261:43489:11761,LH00995:25:23T55JLT4:2:1411:44929:7446,LH00995:25:23T55JLT4:2:2323:42825:25550,LH00995:25:23T55JLT4:2:2326:6032:2009,LH00995:25:23T55JLT4:5:2262:38635:22663,LH00995:25:23T55JLT4:6:1177:16630:22074,LH00995:25:23T55JLT4:6:1308:29339:24555,LH00995:25:23T55JLT4:6:2483:34727:9057,LH00995:25:23T55JLT4:8:1104:14357:15391,LH00995:25:23T55JLT4:8:2444:21557:29599	.	YES_LDAS	0.0339	GT	1.9329	AG	1.5656	"[""INTRACHROMOSOMAL[chr7:20.20Mb]""]"	chr7:74195439-chr7:94412068	False			0	Does not meet inclusion criteria	FAIL	10
CA13--CA3	10	0	10.0	0.0	INCL_NON_REF_SPLICE	CA13^ENSG00000185015.8	chr8:85281639:+	CA3^ENSG00000164879.7	chr8:85439712:+	LH00995:25:23T55JLT4:2:1146:33724:9842,LH00995:25:23T55JLT4:2:1350:30003:18389,LH00995:25:23T55JLT4:5:1326:34735:16806,LH00995:25:23T55JLT4:5:1487:50284:7278,LH00995:25:23T55JLT4:5:2204:18474:8847,LH00995:25:23T55JLT4:6:1290:44848:15769,LH00995:25:23T55JLT4:6:1305:50786:11930,LH00995:25:23T55JLT4:6:2194:10554:25788,LH00995:25:23T55JLT4:6:2255:9130:9253,LH00995:25:23T55JLT4:6:2330:19623:19580	.	YES_LDAS	0.0339	GT	1.7968	AG	1.8892	"[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]"	chr8:85281639-chr8:85439712	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
RBM14--RBM4	9	0	9.0	0.0	ONLY_REF_SPLICE	RBM14^ENSG00000239306.5	chr11:66617057:+	RBM4^ENSG00000173933.21	chr11:66639700:+	LH00995:25:23T55JLT4:2:1475:10522:14410,LH00995:25:23T55JLT4:2:2208:2642:2864,LH00995:25:23T55JLT4:5:1203:39986:19566,LH00995:25:23T55JLT4:5:1427:14106:25045,LH00995:25:23T55JLT4:5:2343:15853:18067,LH00995:25:23T55JLT4:6:1270:29024:23280,LH00995:25:23T55JLT4:8:1102:45252:17983,LH00995:25:23T55JLT4:8:1413:6323:10584,LH00995:25:23T55JLT4:8:2222:23450:27777	.	YES_LDAS	0.0305	GT	1.7465	AG	1.9086	"[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]"	chr11:66617057-chr11:66639700	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	9
PLCXD1--IGH@-ext	9	0	9.0	0.0	INCL_NON_REF_SPLICE	PLCXD1^ENSG00000182378.15	chrX:293089:+	IGH@-ext^IGH.g@-ext	chr14:105743073:-	LH00995:25:23T55JLT4:2:1350:9753:15741,LH00995:25:23T55JLT4:5:1479:4285:3690,LH00995:25:23T55JLT4:5:2228:12391:23728,LH00995:25:23T55JLT4:5:2417:22058:3284,LH00995:25:23T55JLT4:6:1108:23264:3999,LH00995:25:23T55JLT4:6:1327:51902:1617,LH00995:25:23T55JLT4:6:2259:15562:10753,LH00995:25:23T55JLT4:8:1460:6865:22004,LH00995:25:23T55JLT4:8:2106:14389:10318	.	NO_LDAS	0.0305	AT	1.9086	TG	1.7465	"[""INTERCHROMOSOMAL[chrX--chr14]""]"	chrX:293089-chr14:105743073	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	9
LINC00623--NBPF26	9	0	9.0	0.0	ONLY_REF_SPLICE	LINC00623^ENSG00000226067.7	chr1:120913450:+	NBPF26^ENSG00000273136.7	chr1:120763628:+	LH00995:25:23T55JLT4:2:1152:19445:12546,LH00995:25:23T55JLT4:2:1249:47784:22369,LH00995:25:23T55JLT4:2:1344:46280:1995,LH00995:25:23T55JLT4:6:1169:12908:9379,LH00995:25:23T55JLT4:6:1179:41935:23700,LH00995:25:23T55JLT4:6:1343:6178:23616,LH00995:25:23T55JLT4:6:2209:24623:14592,LH00995:25:23T55JLT4:8:1402:16347:8300,LH00995:25:23T55JLT4:8:1439:20100:23406	.	YES_LDAS	0.0305	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""LOCAL_REARRANGEMENT:+:[71074]""]"	chr1:120913450-chr1:120763628	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	9
LEPROTL1--SMG1P1	9	0	3.0	0.0	ONLY_REF_SPLICE	LEPROTL1^ENSG00000104660.19	chr8:30104991:+	SMG1P1^ENSG00000237296.9	chr16:22451620:+	LH00995:25:23T55JLT4:2:1241:46903:19945,LH00995:25:23T55JLT4:2:1261:7763:11930,LH00995:25:23T55JLT4:5:1436:13240:3368,LH00995:25:23T55JLT4:5:1478:16161:16834,LH00995:25:23T55JLT4:5:2211:12439:1336,LH00995:25:23T55JLT4:6:2321:10344:25648,LH00995:25:23T55JLT4:6:2455:28158:3901,LH00995:25:23T55JLT4:8:1480:42340:6885,LH00995:25:23T55JLT4:8:2273:10562:23588	.	YES_LDAS	0.0102	GC	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr16]""]"	chr8:30104991-chr16:22451620	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	9
FBXO25--SEPTIN14	9	0	9.0	0.0	ONLY_REF_SPLICE	FBXO25^ENSG00000147364.17	chr8:435707:+	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	LH00995:25:23T55JLT4:2:1481:24089:8286,LH00995:25:23T55JLT4:2:2145:16379:17549,LH00995:25:23T55JLT4:2:2337:22770:20687,LH00995:25:23T55JLT4:5:2279:18127:11551,LH00995:25:23T55JLT4:8:1174:22301:22369,LH00995:25:23T55JLT4:8:1463:28741:8328,LH00995:25:23T55JLT4:8:2172:29283:29361,LH00995:25:23T55JLT4:8:2271:15967:27399,LH00995:25:23T55JLT4:8:2314:8273:23994	.	YES_LDAS	0.0305	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:435707-chr7:55796092	True		aih_curated_blacklist score(6)	0	aih_curated_blacklist score(6)	FAIL	9
EWSR1--IGH@-ext	9	0	9.0	0.0	INCL_NON_REF_SPLICE	EWSR1^ENSG00000182944.18	chr22:29287044:+	IGH@-ext^IGH.g@-ext	chr14:106679373:-	LH00995:25:23T55JLT4:2:2191:13750:13275,LH00995:25:23T55JLT4:5:1342:4964:5484,LH00995:25:23T55JLT4:5:2323:19623:25129,LH00995:25:23T55JLT4:5:2364:35164:27469,LH00995:25:23T55JLT4:5:2397:43594:23209,LH00995:25:23T55JLT4:6:2278:2804:3929,LH00995:25:23T55JLT4:6:2309:39096:12000,LH00995:25:23T55JLT4:8:1146:6081:5652,LH00995:25:23T55JLT4:8:2290:21282:28338	.	NO_LDAS	0.0305	AG	1.8892	TC	1.7465	"[""INTERCHROMOSOMAL[chr22--chr14]""]"	chr22:29287044-chr14:106679373	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	9
CHCHD10--AC005064.1	9	0	9.0	0.0	INCL_NON_REF_SPLICE	CHCHD10^ENSG00000250479.9	chr22:23767834:-	AC005064.1^ENSG00000234715.2	chr7:103446122:+	LH00995:25:23T55JLT4:2:1150:4843:22509,LH00995:25:23T55JLT4:2:1220:26168:26881,LH00995:25:23T55JLT4:2:1382:41879:6030,LH00995:25:23T55JLT4:2:2427:43384:13513,LH00995:25:23T55JLT4:5:1389:41037:7768,LH00995:25:23T55JLT4:6:1313:50090:21570,LH00995:25:23T55JLT4:6:2197:25375:23322,LH00995:25:23T55JLT4:8:1194:14858:27890,LH00995:25:23T55JLT4:8:1416:30140:6661	.	NO_LDAS	0.0305	GT	1.6402	AG	1.1589	"[""INTERCHROMOSOMAL[chr22--chr7]""]"	chr22:23767834-chr7:103446122	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
C1QC--IGL-@-ext	9	0	3.0	0.0	INCL_NON_REF_SPLICE	C1QC^ENSG00000159189.12	chr1:22647462:+	IGL-@-ext^IGL-.g@-ext	chr22:22661133:-	LH00995:25:23T55JLT4:2:1145:32907:28800,LH00995:25:23T55JLT4:2:1280:21055:6030,LH00995:25:23T55JLT4:2:2134:8524:6549,LH00995:25:23T55JLT4:5:1139:16913:21164,LH00995:25:23T55JLT4:5:1287:32058:1322,LH00995:25:23T55JLT4:5:2130:10481:15937,LH00995:25:23T55JLT4:5:2440:9325:26040,LH00995:25:23T55JLT4:6:2454:27171:4293,LH00995:25:23T55JLT4:8:1389:38473:15573	.	NO_LDAS	0.0102	TT	1.8892	GC	1.4256	"[""INTERCHROMOSOMAL[chr1--chr22]""]"	chr1:22647462-chr22:22661133	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	9
BOLA2B--SMG1P2	9	0	9.0	0.0	INCL_NON_REF_SPLICE	BOLA2B^ENSG00000169627.9	chr16:30193358:-	SMG1P2^ENSG00000205534.6	chr16:29548658:-	LH00995:25:23T55JLT4:2:1214:37340:2653,LH00995:25:23T55JLT4:2:1262:30286:21430,LH00995:25:23T55JLT4:5:1264:44209:22060,LH00995:25:23T55JLT4:5:1359:32341:3494,LH00995:25:23T55JLT4:6:1494:31062:19804,LH00995:25:23T55JLT4:6:2289:28199:22243,LH00995:25:23T55JLT4:6:2311:31823:8034,LH00995:25:23T55JLT4:6:2405:41871:4251,LH00995:25:23T55JLT4:8:2237:33166:17787	.	YES_LDAS	0.0305	GT	1.9329	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]"	chr16:30193358-chr16:29548658	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	9
AL390860.1--TRIM58	9	0	9.0	0.0	ONLY_REF_SPLICE	AL390860.1^ENSG00000235749.3	chr1:247640429:+	TRIM58^ENSG00000162722.9	chr1:247860617:+	LH00995:25:23T55JLT4:2:1145:6639:15559,LH00995:25:23T55JLT4:2:2438:22188:26965,LH00995:25:23T55JLT4:5:1140:30003:11972,LH00995:25:23T55JLT4:5:1263:51765:22369,LH00995:25:23T55JLT4:5:1490:47194:12546,LH00995:25:23T55JLT4:6:2379:23773:15895,LH00995:25:23T55JLT4:6:2443:18644:16876,LH00995:25:23T55JLT4:8:1271:30351:13359,LH00995:25:23T55JLT4:8:2166:49936:2135	.	YES_LDAS	0.0305	GT	1.9219	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.10Mb]"",""NEIGHBORS[95932]""]"	chr1:247640429-chr1:247860617	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
AC211476.4--CCDC146	9	0	1.5	0.0	ONLY_REF_SPLICE	AC211476.4^ENSG00000277125.1	chr7:73069531:+	CCDC146^ENSG00000135205.15	chr7:77236947:+	LH00995:25:23T55JLT4:2:1155:35334:20813,LH00995:25:23T55JLT4:2:2184:7181:29417,LH00995:25:23T55JLT4:5:1105:48278:11117,LH00995:25:23T55JLT4:6:1104:18353:27469,LH00995:25:23T55JLT4:6:1157:11468:2317,LH00995:25:23T55JLT4:6:2307:22560:3480,LH00995:25:23T55JLT4:6:2462:39290:7067,LH00995:25:23T55JLT4:8:2316:31006:15895,LH00995:25:23T55JLT4:8:2424:48998:27637	.	YES_LDAS	0.0051	GT	1.4566	AG	1.9329	"[""INTRACHROMOSOMAL[chr7:4.05Mb]""]"	chr7:73069531-chr7:77236947	True		aih_curated_blacklist score(5)	0	aih_curated_blacklist score(5)	FAIL	9
AC112721.1--COL6A3	9	0	9.0	0.0	ONLY_REF_SPLICE	AC112721.1^ENSG00000222022.1	chr2:237422125:-	COL6A3^ENSG00000163359.16	chr2:237396847:-	LH00995:25:23T55JLT4:2:2159:23514:21612,LH00995:25:23T55JLT4:2:2402:28716:11229,LH00995:25:23T55JLT4:2:2411:48310:28856,LH00995:25:23T55JLT4:5:1132:35593:8286,LH00995:25:23T55JLT4:5:1168:28360:20421,LH00995:25:23T55JLT4:5:2163:48966:19286,LH00995:25:23T55JLT4:5:2492:48682:11733,LH00995:25:23T55JLT4:6:1183:26532:14620,LH00995:25:23T55JLT4:8:2487:31588:19090	.	YES_LDAS	0.0305	GT	1.8892	AG	1.7968	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[7213]""]"	chr2:237422125-chr2:237396847	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	9
YWHAE--CRK	8	0	8.0	0.0	ONLY_REF_SPLICE	YWHAE^ENSG00000108953.17	chr17:1400047:-	CRK^ENSG00000167193.8	chr17:1437155:-	LH00995:25:23T55JLT4:2:1252:40123:12322,LH00995:25:23T55JLT4:5:1135:25399:16610,LH00995:25:23T55JLT4:5:2134:41515:25886,LH00995:25:23T55JLT4:5:2417:11129:16414,LH00995:25:23T55JLT4:5:2486:32818:23238,LH00995:25:23T55JLT4:8:1370:39039:8398,LH00995:25:23T55JLT4:8:1378:3791:18221,LH00995:25:23T55JLT4:8:1472:2125:20575	.	YES_LDAS	0.0271	GT	1.9329	AG	1.8323	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20467]""]"	chr17:1400047-chr17:1437155	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	8
TPTE--BAGE2	8	0	7.71	0.0	ONLY_REF_SPLICE	TPTE^ENSG00000274391.5	chr21:10527412:+	BAGE2^ENSG00000187172.15	chr21:10499475:+	LH00995:25:23T55JLT4:2:1391:28886:24975,LH00995:25:23T55JLT4:5:1428:25731:15643,LH00995:25:23T55JLT4:5:2162:19510:26979,LH00995:25:23T55JLT4:5:2251:16136:11691,LH00995:25:23T55JLT4:6:1261:2594:6563,LH00995:25:23T55JLT4:6:2495:46878:28758,LH00995:25:23T55JLT4:8:1153:41183:8160,LH00995:25:23T55JLT4:8:2369:25278:6507	.	YES_LDAS	0.0261	GT	1.9656	AG	1.8323	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5122]""]"	chr21:10527412-chr21:10499475	False			1		PASS	8
STEAP1--RAPGEF5	8	0	4.0	0.0	ONLY_REF_SPLICE	STEAP1^ENSG00000164647.9	chr7:90162078:+	RAPGEF5^ENSG00000136237.19	chr7:22318037:-	LH00995:25:23T55JLT4:2:2107:4835:7642,LH00995:25:23T55JLT4:2:2143:26645:17338,LH00995:25:23T55JLT4:5:1125:44451:10514,LH00995:25:23T55JLT4:5:2122:9640:12294,LH00995:25:23T55JLT4:6:1173:25909:24583,LH00995:25:23T55JLT4:6:2384:14470:7936,LH00995:25:23T55JLT4:8:2243:22722:25171,LH00995:25:23T55JLT4:8:2340:22204:28646	.	YES_LDAS	0.0135	GT	1.7465	AG	1.8295	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:67.80Mb]""]"	chr7:90162078-chr7:22318037	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	8
HRH1--ATG7	8	0	8.0	0.0	ONLY_REF_SPLICE	HRH1^ENSG00000196639.7	chr3:11154554:+	ATG7^ENSG00000197548.12	chr3:11298686:+	LH00995:25:23T55JLT4:2:2321:49524:19272,LH00995:25:23T55JLT4:5:1220:25901:11537,LH00995:25:23T55JLT4:5:2343:8475:3438,LH00995:25:23T55JLT4:6:1102:12148:19076,LH00995:25:23T55JLT4:6:2251:11080:20701,LH00995:25:23T55JLT4:6:2454:29655:15208,LH00995:25:23T55JLT4:8:1381:2472:11874,LH00995:25:23T55JLT4:8:2382:5975:11495	.	YES_LDAS	0.0271	GT	1.2867	AG	1.7968	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]"	chr3:11154554-chr3:11298686	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
HLA-B--HLA-V	8	0	4.0	0.0	ONLY_REF_SPLICE	HLA-B^ENSG00000234745.13	chr6:31357086:-	HLA-V^ENSG00000181126.13	chr6:29792437:+	LH00995:25:23T55JLT4:2:1149:48367:27497,LH00995:25:23T55JLT4:2:1183:14243:17184,LH00995:25:23T55JLT4:2:2191:35051:14578,LH00995:25:23T55JLT4:2:2271:5684:22705,LH00995:25:23T55JLT4:5:2142:15821:26671,LH00995:25:23T55JLT4:6:2187:34290:15923,LH00995:25:23T55JLT4:8:1217:43998:20603,LH00995:25:23T55JLT4:8:1451:16258:3859	.	YES_LDAS	0.0135	GT	1.7056	AG	1.8323	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:1.56Mb]""]"	chr6:31357086-chr6:29792437	True	"pair|MHC complexes|HLA-V	HLA-B; pair|recurrent breakpoints"	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
FUS--CTNNA1	8	0	8.0	0.0	INCL_NON_REF_SPLICE	FUS^ENSG00000089280.19	chr16:31184352:+	CTNNA1^ENSG00000044115.21	chr5:138934073:+	LH00995:25:23T55JLT4:2:1281:13588:18207,LH00995:25:23T55JLT4:2:2366:30804:27371,LH00995:25:23T55JLT4:5:1216:43141:7740,LH00995:25:23T55JLT4:6:1135:18717:1392,LH00995:25:23T55JLT4:6:2119:6881:28758,LH00995:25:23T55JLT4:6:2425:4187:2289,LH00995:25:23T55JLT4:8:1194:32397:24050,LH00995:25:23T55JLT4:8:2259:13184:26614	.	NO_LDAS	0.0271	GT	1.8062	AG	1.9899	"[""INTERCHROMOSOMAL[chr16--chr5]""]"	chr16:31184352-chr5:138934073	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	8
CTSC--RAB38	8	0	8.0	0.0	ONLY_REF_SPLICE	CTSC^ENSG00000109861.17	chr11:88300530:-	RAB38^ENSG00000123892.12	chr11:88149955:-	LH00995:25:23T55JLT4:5:1363:2934:16091,LH00995:25:23T55JLT4:5:1366:11622:29543,LH00995:25:23T55JLT4:5:2274:19413:12602,LH00995:25:23T55JLT4:6:2226:37882:2836,LH00995:25:23T55JLT4:6:2240:39250:21766,LH00995:25:23T55JLT4:8:2179:35237:23027,LH00995:25:23T55JLT4:8:2252:7351:22845,LH00995:25:23T55JLT4:8:2282:26572:2667	.	YES_LDAS	0.0271	GT	1.9656	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]"	chr11:88300530-chr11:88149955	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	8
CCDC32--CBX3	8	1	8.0	0.53	INCL_NON_REF_SPLICE	CCDC32^ENSG00000128891.16	chr15:40562772:-	CBX3^ENSG00000122565.19	chr7:26201769:+	LH00995:25:23T55JLT4:2:1480:43125:1406,LH00995:25:23T55JLT4:2:2451:17665:27595,LH00995:25:23T55JLT4:5:2119:49152:13163,LH00995:25:23T55JLT4:5:2312:31693:21430,LH00995:25:23T55JLT4:5:2381:35941:6507,LH00995:25:23T55JLT4:6:1327:42922:8959,LH00995:25:23T55JLT4:8:1213:45188:2681,LH00995:25:23T55JLT4:8:1266:38190:17745	LH00995:25:23T55JLT4:6:1138:21265:19650	YES_LDAS	0.0289	GT	1.8892	AG	1.3383	"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr15--chr7]""]"	chr15:40562772-chr7:26201769	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
VTI1A--AL158212.1	7	0	7.0	0.0	ONLY_REF_SPLICE	VTI1A^ENSG00000151532.14	chr10:112668998:+	AL158212.1^ENSG00000225292.2	chr10:112888735:+	LH00995:25:23T55JLT4:2:2183:34598:3957,LH00995:25:23T55JLT4:2:2326:41579:29473,LH00995:25:23T55JLT4:5:2411:6914:17380,LH00995:25:23T55JLT4:6:1127:44451:16484,LH00995:25:23T55JLT4:6:1195:10441:25479,LH00995:25:23T55JLT4:6:2127:27212:19076,LH00995:25:23T55JLT4:8:2119:31532:19552	.	YES_LDAS	0.0237	GT	1.7465	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]"	chr10:112668998-chr10:112888735	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
TLK2--AC240565.1	7	0	1.5	0.0	ONLY_REF_SPLICE	TLK2^ENSG00000146872.18	chr17:62560126:+	AC240565.1^ENSG00000280136.2	chr17:106864:-	LH00995:25:23T55JLT4:2:1262:3815:25746,LH00995:25:23T55JLT4:2:1383:43497:15615,LH00995:25:23T55JLT4:2:1385:1655:5050,LH00995:25:23T55JLT4:2:2284:44686:27904,LH00995:25:23T55JLT4:5:1497:43489:19889,LH00995:25:23T55JLT4:8:2198:24639:4167,LH00995:25:23T55JLT4:8:2282:9130:24499	.	YES_LDAS	0.0051	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr17:62.34Mb]""]"	chr17:62560126-chr17:106864	False			0	Read count too low: 7 < 8	FAIL	7
SOBP--YWHAZ	7	0	7.0	0.0	INCL_NON_REF_SPLICE	SOBP^ENSG00000112320.12	chr6:107506427:+	YWHAZ^ENSG00000164924.18	chr8:100918879:-	LH00995:25:23T55JLT4:2:1308:32761:23560,LH00995:25:23T55JLT4:2:2148:41329:1154,LH00995:25:23T55JLT4:2:2468:42809:22999,LH00995:25:23T55JLT4:6:2356:44646:22957,LH00995:25:23T55JLT4:6:2406:43044:18866,LH00995:25:23T55JLT4:8:1419:13362:11789,LH00995:25:23T55JLT4:8:2139:18523:21010	.	NO_LDAS	0.0237	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr8]""]"	chr6:107506427-chr8:100918879	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
NDUFAF6--NPIPB11	7	0	0.5	0.0	ONLY_REF_SPLICE	NDUFAF6^ENSG00000156170.13	chr8:95044595:+	NPIPB11^ENSG00000254206.5	chr16:29385855:-	LH00995:25:23T55JLT4:2:1271:27357:25690,LH00995:25:23T55JLT4:2:2156:46935:23308,LH00995:25:23T55JLT4:2:2322:6801:13233,LH00995:25:23T55JLT4:5:1431:18725:6114,LH00995:25:23T55JLT4:5:1443:45471:6703,LH00995:25:23T55JLT4:5:1479:35860:1743,LH00995:25:23T55JLT4:5:2212:43003:12910	.	NO_LDAS	0.0017	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr16]""]"	chr8:95044595-chr16:29385855	False			0	Read count too low: 7 < 8	FAIL	7
MRPL18--AL137005.1	7	0	7.0	0.0	ONLY_REF_SPLICE	MRPL18^ENSG00000112110.10	chr6:159790060:+	AL137005.1^ENSG00000235538.5	chr6:163703906:+	LH00995:25:23T55JLT4:2:2424:7076:16848,LH00995:25:23T55JLT4:5:1215:6364:1967,LH00995:25:23T55JLT4:5:1237:2480:1210,LH00995:25:23T55JLT4:5:2267:31483:4335,LH00995:25:23T55JLT4:8:1283:21549:17787,LH00995:25:23T55JLT4:8:1443:22107:3116,LH00995:25:23T55JLT4:8:2127:15012:18123	.	YES_LDAS	0.0237	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chr6:3.87Mb]""]"	chr6:159790060-chr6:163703906	False			0	Read count too low: 7 < 8	FAIL	7
LILRA5--LILRB1	7	0	7.0	0.0	ONLY_REF_SPLICE	LILRA5^ENSG00000187116.14	chr19:54312335:-	LILRB1^ENSG00000104972.15	chr19:54631500:+	LH00995:25:23T55JLT4:2:1205:27495:28282,LH00995:25:23T55JLT4:2:1431:6339:12154,LH00995:25:23T55JLT4:2:2267:19825:2415,LH00995:25:23T55JLT4:5:1429:3556:11173,LH00995:25:23T55JLT4:5:2336:10020:13149,LH00995:25:23T55JLT4:8:1408:50826:17352,LH00995:25:23T55JLT4:8:1474:47016:21542	.	YES_LDAS	0.0237	GT	1.7819	AG	1.6729	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]"	chr19:54312335-chr19:54631500	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	7
GNG10--UGCG	7	0	7.0	0.0	ONLY_REF_SPLICE	GNG10^ENSG00000242616.4	chr9:111666946:+	UGCG^ENSG00000148154.10	chr9:111914605:+	LH00995:25:23T55JLT4:2:1251:21573:27553,LH00995:25:23T55JLT4:2:1251:33360:25550,LH00995:25:23T55JLT4:5:1364:10983:26642,LH00995:25:23T55JLT4:5:2396:2553:17983,LH00995:25:23T55JLT4:8:1211:51401:18459,LH00995:25:23T55JLT4:8:2224:33700:19917,LH00995:25:23T55JLT4:8:2365:46013:11930	.	YES_LDAS	0.0237	GT	1.9329	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]"	chr9:111666946-chr9:111914605	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
CMTM8--CMTM7	7	0	7.0	0.0	ONLY_REF_SPLICE	CMTM8^ENSG00000170293.9	chr3:32239119:+	CMTM7^ENSG00000153551.14	chr3:32441840:+	LH00995:25:23T55JLT4:2:1154:49775:10374,LH00995:25:23T55JLT4:5:1210:20060:2962,LH00995:25:23T55JLT4:6:2152:8273:24695,LH00995:25:23T55JLT4:6:2223:47234:28310,LH00995:25:23T55JLT4:6:2324:34840:29151,LH00995:25:23T55JLT4:8:1152:33724:10598,LH00995:25:23T55JLT4:8:2235:7569:23532	.	YES_LDAS	0.0237	GT	1.9656	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]"	chr3:32239119-chr3:32441840	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
AP001347.1--ANKRD20A11P	7	0	7.0	0.0	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13979932:-	LH00995:25:23T55JLT4:2:1374:30011:22523,LH00995:25:23T55JLT4:2:2337:32252:14718,LH00995:25:23T55JLT4:5:1431:37478:17913,LH00995:25:23T55JLT4:5:2333:43117:3718,LH00995:25:23T55JLT4:6:1107:6283:17128,LH00995:25:23T55JLT4:6:2267:9236:7418,LH00995:25:23T55JLT4:6:2279:23256:15138	.	YES_LDAS	0.0237	GT	1.8323	AG	1.5628	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13979932	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	7
AGAP12P--AC022400.4	7	0	2.0	0.0	INCL_NON_REF_SPLICE	AGAP12P^ENSG00000265018.6	chr10:48025897:-	AC022400.4^ENSG00000272140.2	chr10:73713332:-	LH00995:25:23T55JLT4:2:1151:1882:15475,LH00995:25:23T55JLT4:2:2153:34954:1378,LH00995:25:23T55JLT4:6:1261:10781:14101,LH00995:25:23T55JLT4:8:1364:27576:16091,LH00995:25:23T55JLT4:8:1463:27632:11621,LH00995:25:23T55JLT4:8:2129:7804:25536,LH00995:25:23T55JLT4:8:2366:45633:2948	.	YES_LDAS	0.0068	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr10:25.67Mb]""]"	chr10:48025897-chr10:73713332	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
AC016597.1--NPIPB11	7	0	0.5	0.0	ONLY_REF_SPLICE	AC016597.1^ENSG00000261329.6	chr16:27685266:-	NPIPB11^ENSG00000254206.5	chr16:29385855:-	LH00995:25:23T55JLT4:2:1271:27357:25690,LH00995:25:23T55JLT4:2:2156:46935:23308,LH00995:25:23T55JLT4:2:2322:6801:13233,LH00995:25:23T55JLT4:5:1431:18725:6114,LH00995:25:23T55JLT4:5:1443:45471:6703,LH00995:25:23T55JLT4:5:1479:35860:1743,LH00995:25:23T55JLT4:5:2212:43003:12910	.	NO_LDAS	0.0017	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:1.66Mb]""]"	chr16:27685266-chr16:29385855	False			0	Read count too low: 7 < 8	FAIL	7
TPM2--CNTROB	6	0	6.0	0.0	ONLY_REF_SPLICE	TPM2^ENSG00000198467.16	chr9:35685064:-	CNTROB^ENSG00000170037.14	chr17:7949385:+	LH00995:25:23T55JLT4:2:1361:37122:24499,LH00995:25:23T55JLT4:2:2170:45843:15643,LH00995:25:23T55JLT4:5:1444:2942:5652,LH00995:25:23T55JLT4:6:2174:43448:29375,LH00995:25:23T55JLT4:8:1164:10902:5960,LH00995:25:23T55JLT4:8:1332:13159:15110	.	YES_LDAS	0.0203	GT	1.7465	AG	1.7968	"[""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr9--chr17]""]"	chr9:35685064-chr17:7949385	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
TMEFF2--TEX41	6	0	6.0	0.0	ONLY_REF_SPLICE	TMEFF2^ENSG00000144339.12	chr2:191998262:-	TEX41^ENSG00000226674.11	chr2:144768098:+	LH00995:25:23T55JLT4:2:1467:28652:25269,LH00995:25:23T55JLT4:2:2280:20578:24513,LH00995:25:23T55JLT4:8:1424:41410:1771,LH00995:25:23T55JLT4:8:1427:50956:10318,LH00995:25:23T55JLT4:8:2193:37025:24723,LH00995:25:23T55JLT4:8:2263:45123:2681	.	YES_LDAS	0.0203	GT	1.8892	AG	1.9219	"[""INTRACHROMOSOMAL[chr2:46.69Mb]""]"	chr2:191998262-chr2:144768098	False			0	Read count too low: 6 < 8	FAIL	6
SMIM13--AL022098.1	6	0	6.0	0.0	ONLY_REF_SPLICE	SMIM13^ENSG00000224531.6	chr6:11094389:+	AL022098.1^ENSG00000287920.1	chr6:11295769:+	LH00995:25:23T55JLT4:2:1241:43869:20771,LH00995:25:23T55JLT4:2:1247:44306:1350,LH00995:25:23T55JLT4:2:2173:41175:29137,LH00995:25:23T55JLT4:2:2374:38457:18571,LH00995:25:23T55JLT4:5:1421:45568:9786,LH00995:25:23T55JLT4:6:1294:34760:2780	.	YES_LDAS	0.0203	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.15Mb]""]"	chr6:11094389-chr6:11295769	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
RIMKLA--CAMSAP1	6	0	6.0	0.0	INCL_NON_REF_SPLICE	RIMKLA^ENSG00000177181.15	chr1:42419655:+	CAMSAP1^ENSG00000130559.19	chr9:135883078:-	LH00995:25:23T55JLT4:2:1419:30440:14101,LH00995:25:23T55JLT4:2:1431:26945:3088,LH00995:25:23T55JLT4:2:2118:30973:12504,LH00995:25:23T55JLT4:2:2395:14357:19762,LH00995:25:23T55JLT4:6:1388:34857:13373,LH00995:25:23T55JLT4:8:2439:2197:2317	.	NO_LDAS	0.0203	GT	1.9899	AG	1.9656	"[""INTERCHROMOSOMAL[chr1--chr9]""]"	chr1:42419655-chr9:135883078	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	6
PICALM--SYTL2	6	0	6.0	0.0	ONLY_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85981129:-	SYTL2^ENSG00000137501.17	chr11:85758114:-	LH00995:25:23T55JLT4:2:1225:8354:8384,LH00995:25:23T55JLT4:2:1456:3613:18529,LH00995:25:23T55JLT4:5:2126:22503:13723,LH00995:25:23T55JLT4:5:2131:16606:13345,LH00995:25:23T55JLT4:5:2481:13515:10318,LH00995:25:23T55JLT4:8:2350:4131:3256	.	YES_LDAS	0.0203	GT	1.9219	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"	chr11:85981129-chr11:85758114	False			0	Read count too low: 6 < 8	FAIL	6
PICALM--SYTL2	6	0	6.0	0.0	ONLY_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85974708:-	SYTL2^ENSG00000137501.17	chr11:85758114:-	LH00995:25:23T55JLT4:5:2201:2238:24639,LH00995:25:23T55JLT4:6:1323:6153:7684,LH00995:25:23T55JLT4:6:1395:15392:29123,LH00995:25:23T55JLT4:6:1446:19801:24569,LH00995:25:23T55JLT4:6:2256:10611:25073,LH00995:25:23T55JLT4:8:2388:22180:5232	.	YES_LDAS	0.0203	GT	1.9086	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"	chr11:85974708-chr11:85758114	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
NDC80--HIF1A	6	0	6.0	0.0	ONLY_REF_SPLICE	NDC80^ENSG00000080986.13	chr18:2577357:+	HIF1A^ENSG00000100644.17	chr14:61744705:+	LH00995:25:23T55JLT4:2:2202:33845:20449,LH00995:25:23T55JLT4:2:2303:36086:19118,LH00995:25:23T55JLT4:5:2379:19680:21220,LH00995:25:23T55JLT4:8:1278:23628:3144,LH00995:25:23T55JLT4:8:1341:6849:19678,LH00995:25:23T55JLT4:8:2413:40730:14298	.	YES_LDAS	0.0203	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr18--chr14]""]"	chr18:2577357-chr14:61744705	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
IGL-@-ext--CTSB	6	0	6.0	0.0	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22093911:-	CTSB^ENSG00000164733.22	chr8:11844379:-	LH00995:25:23T55JLT4:2:1482:31904:7193,LH00995:25:23T55JLT4:2:2160:35771:9099,LH00995:25:23T55JLT4:5:1169:21832:15755,LH00995:25:23T55JLT4:6:1141:29752:16049,LH00995:25:23T55JLT4:6:1282:42688:12168,LH00995:25:23T55JLT4:8:1374:45519:9982	.	NO_LDAS	0.0203	CC	1.3996	AC	1.8892	"[""INTERCHROMOSOMAL[chr22--chr8]""]"	chr22:22093911-chr8:11844379	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
HNRNPKP3--CACNB2	6	0	6.0	0.0	INCL_NON_REF_SPLICE	HNRNPKP3^ENSG00000251557.2	chr11:43261684:-	CACNB2^ENSG00000165995.22	chr10:18541050:+	LH00995:25:23T55JLT4:2:1346:48666:23504,LH00995:25:23T55JLT4:6:1156:50276:3985,LH00995:25:23T55JLT4:6:1468:14704:28296,LH00995:25:23T55JLT4:6:2152:50576:10108,LH00995:25:23T55JLT4:6:2489:11986:14928,LH00995:25:23T55JLT4:8:1231:27980:2976	.	NO_LDAS	0.0203	GT	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr10]""]"	chr11:43261684-chr10:18541050	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	6
GOLGA6L10--GOLGA2P6	6	0	1.2	0.0	INCL_NON_REF_SPLICE	GOLGA6L10^ENSG00000278662.5	chr15:82347510:-	GOLGA2P6^ENSG00000241621.1	chr10:30370881:-	LH00995:25:23T55JLT4:5:2214:26775:6605,LH00995:25:23T55JLT4:6:1442:24639:18712,LH00995:25:23T55JLT4:6:1449:42777:6857,LH00995:25:23T55JLT4:8:1410:49961:9407,LH00995:25:23T55JLT4:8:2324:26581:17899,LH00995:25:23T55JLT4:8:2474:33878:26839	.	YES_LDAS	0.0041	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr15--chr10]""]"	chr15:82347510-chr10:30370881	False			0	Read count too low: 6 < 8	FAIL	6
FBXO25--AL669831.1	6	0	3.0	0.0	ONLY_REF_SPLICE	FBXO25^ENSG00000147364.17	chr8:435707:+	AL669831.1^ENSG00000228327.3	chr1:774280:-	LH00995:25:23T55JLT4:2:2163:45018:8637,LH00995:25:23T55JLT4:5:1133:42599:6353,LH00995:25:23T55JLT4:6:1357:48100:24989,LH00995:25:23T55JLT4:8:1206:34234:14172,LH00995:25:23T55JLT4:8:1250:8273:20968,LH00995:25:23T55JLT4:8:2114:17690:12868	.	YES_LDAS	0.0102	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr1]""]"	chr8:435707-chr1:774280	False			0	Read count too low: 6 < 8	FAIL	6
ELAPOR2--TMEM243	6	0	6.0	0.0	INCL_NON_REF_SPLICE	ELAPOR2^ENSG00000164659.15	chr7:86897506:-	TMEM243^ENSG00000135185.12	chr7:87206742:-	LH00995:25:23T55JLT4:2:1253:6906:9295,LH00995:25:23T55JLT4:2:2154:25132:27834,LH00995:25:23T55JLT4:5:1388:33053:27932,LH00995:25:23T55JLT4:6:1396:29436:25087,LH00995:25:23T55JLT4:8:2295:23992:2429,LH00995:25:23T55JLT4:8:2387:3217:2878	.	YES_LDAS	0.0203	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.14Mb]""]"	chr7:86897506-chr7:87206742	False			0	Read count too low: 6 < 8	FAIL	6
DDX24--AL022099.1	6	0	6.0	0.0	INCL_NON_REF_SPLICE	DDX24^ENSG00000089737.17	chr14:94051188:-	AL022099.1^ENSG00000271162.1	chr6:48952713:-	LH00995:25:23T55JLT4:2:1464:2302:9646,LH00995:25:23T55JLT4:2:2310:28773:21892,LH00995:25:23T55JLT4:5:1273:29784:4307,LH00995:25:23T55JLT4:5:1453:14599:9057,LH00995:25:23T55JLT4:5:2118:1089:10598,LH00995:25:23T55JLT4:5:2158:14793:7095	.	NO_LDAS	0.0203	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr14--chr6]""]"	chr14:94051188-chr6:48952713	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
CTSC--RAB38	6	0	6.0	0.0	ONLY_REF_SPLICE	CTSC^ENSG00000109861.17	chr11:88296133:-	RAB38^ENSG00000123892.12	chr11:88149955:-	LH00995:25:23T55JLT4:5:1115:3872:25115,LH00995:25:23T55JLT4:6:1436:45487:12672,LH00995:25:23T55JLT4:6:2291:45924:29515,LH00995:25:23T55JLT4:6:2491:50495:22859,LH00995:25:23T55JLT4:8:1350:28797:5176,LH00995:25:23T55JLT4:8:1419:4066:3424	.	YES_LDAS	0.0203	GT	1.9899	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]"	chr11:88296133-chr11:88149955	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
AL139042.1--CNR1	6	0	6.0	0.0	ONLY_REF_SPLICE	AL139042.1^ENSG00000234426.3	chr6:88324000:-	CNR1^ENSG00000118432.12	chr6:88145337:-	LH00995:25:23T55JLT4:2:1223:45293:1883,LH00995:25:23T55JLT4:2:1491:46620:12840,LH00995:25:23T55JLT4:5:2353:51757:18515,LH00995:25:23T55JLT4:6:2374:6922:24316,LH00995:25:23T55JLT4:8:2412:3726:26460,LH00995:25:23T55JLT4:8:2461:28061:17212	.	YES_LDAS	0.0203	GT	1.9899	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[11445]""]"	chr6:88324000-chr6:88145337	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
TVP23C--CDRT4	6	1	6.0	0.67	INCL_NON_REF_SPLICE	TVP23C^ENSG00000175106.17	chr17:15503098:-	CDRT4^ENSG00000239704.11	chr17:15438200:-	LH00995:25:23T55JLT4:5:1462:45762:11019,LH00995:25:23T55JLT4:5:2394:42138:21556,LH00995:25:23T55JLT4:6:1246:40398:17815,LH00995:25:23T55JLT4:8:1225:14268:6297,LH00995:25:23T55JLT4:8:1348:17924:19468,LH00995:25:23T55JLT4:8:2360:32583:8511	LH00995:25:23T55JLT4:6:1437:43998:17100	YES_LDAS	0.0226	GT	1.9329	AG	1.6402	"[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]"	chr17:15503098-chr17:15438200	False			0	Read count too low: 7 < 8	FAIL	7
SAMD5--AL033504.1	5	0	5.0	0.0	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	AL033504.1^ENSG00000227681.5	chr6:147947472:+	LH00995:25:23T55JLT4:2:2136:17010:20239,LH00995:25:23T55JLT4:2:2136:2658:23462,LH00995:25:23T55JLT4:5:1478:44856:3340,LH00995:25:23T55JLT4:6:2261:27470:4139,LH00995:25:23T55JLT4:8:2386:12447:1126	.	YES_LDAS	0.0169	GT	1.8295	AG	1.5058	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"	chr6:147509387-chr6:147947472	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	5
C10orf71--PTMS	5	0	2.5	0.0	INCL_NON_REF_SPLICE	C10orf71^ENSG00000177354.12	chr10:49325741:+	PTMS^ENSG00000159335.18	chr12:6769927:+	LH00995:25:23T55JLT4:2:1110:30294:28170,LH00995:25:23T55JLT4:2:1312:11994:24499,LH00995:25:23T55JLT4:2:2280:47890:22523,LH00995:25:23T55JLT4:8:1163:45382:6269,LH00995:25:23T55JLT4:8:2378:27333:21164	.	NO_LDAS	0.0085	GT	1.5219	AG	1.6402	"[""INTERCHROMOSOMAL[chr10--chr12]""]"	chr10:49325741-chr12:6769927	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	5
BOLA2B--SMG1P2	5	0	5.0	0.0	ONLY_REF_SPLICE	BOLA2B^ENSG00000169627.9	chr16:30193358:-	SMG1P2^ENSG00000205534.6	chr16:29548762:-	LH00995:25:23T55JLT4:2:1466:28813:27203,LH00995:25:23T55JLT4:5:1254:26864:12056,LH00995:25:23T55JLT4:6:2494:26006:5778,LH00995:25:23T55JLT4:8:1286:5708:10977,LH00995:25:23T55JLT4:8:2362:42227:4783	.	YES_LDAS	0.0169	GT	1.9329	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]"	chr16:30193358-chr16:29548762	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	5
AP001347.1--ANKRD20A11P	5	0	2.5	0.0	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13954147:-	LH00995:25:23T55JLT4:2:2335:20149:3256,LH00995:25:23T55JLT4:2:2388:23320:4209,LH00995:25:23T55JLT4:8:1442:14260:9001,LH00995:25:23T55JLT4:8:2179:26928:17240,LH00995:25:23T55JLT4:8:2398:10473:28730	.	YES_LDAS	0.0085	GT	1.8323	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13954147	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	5
AL033504.1--SASH1	5	0	5.0	0.0	ONLY_REF_SPLICE	AL033504.1^ENSG00000227681.5	chr6:147733811:+	SASH1^ENSG00000111961.18	chr6:148390134:+	LH00995:25:23T55JLT4:2:1371:37276:16834,LH00995:25:23T55JLT4:5:1126:2456:3606,LH00995:25:23T55JLT4:6:1130:10449:22887,LH00995:25:23T55JLT4:6:1323:28118:7978,LH00995:25:23T55JLT4:8:2150:15093:20253	.	YES_LDAS	0.0169	GT	1.8892	AG	1.9219	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.32Mb]""]"	chr6:147733811-chr6:148390134	False			0	Read count too low: 5 < 8	FAIL	5
AC091132.4--AC091132.1	5	0	1.25	0.0	INCL_NON_REF_SPLICE	AC091132.4^ENSG00000267198.1	chr17:45545944:+	AC091132.1^ENSG00000131484.4	chr17:45534200:+	LH00995:25:23T55JLT4:2:2410:50252:21990,LH00995:25:23T55JLT4:5:1247:39096:12672,LH00995:25:23T55JLT4:5:2167:44977:29641,LH00995:25:23T55JLT4:6:2184:38627:21808,LH00995:25:23T55JLT4:8:1276:46943:3340	.	YES_LDAS	0.0042	GT	1.5329	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11094]""]"	chr17:45545944-chr17:45534200	False			0	Read count too low: 5 < 8	FAIL	5
TPTE--BAGE2	4	0	2.0	0.0	ONLY_REF_SPLICE	TPTE^ENSG00000274391.5	chr21:10552716:+	BAGE2^ENSG00000187172.15	chr21:10514122:+	LH00995:25:23T55JLT4:2:1197:50705:14676,LH00995:25:23T55JLT4:2:1286:26176:20813,LH00995:25:23T55JLT4:2:2321:43400:1575,LH00995:25:23T55JLT4:5:1237:42372:7390	.	YES_LDAS	0.0068	GT	1.8295	AG	1.7819	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5122]""]"	chr21:10552716-chr21:10514122	False			0	Read count too low: 4 < 8	FAIL	4
RPS3AP11--SEPTIN7	4	0	1.33	0.0	INCL_NON_REF_SPLICE	RPS3AP11^ENSG00000230116.1	chr1:42491744:+	SEPTIN7^ENSG00000122545.20	chr7:35832804:+	LH00995:25:23T55JLT4:6:1435:37073:11075,LH00995:25:23T55JLT4:6:2498:29946:11537,LH00995:25:23T55JLT4:8:1216:13289:12476,LH00995:25:23T55JLT4:8:2257:25513:16918	.	NO_LDAS	0.0045	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:42491744-chr7:35832804	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
PICALM--SYTL2	4	0	4.0	0.0	ONLY_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85974708:-	SYTL2^ENSG00000137501.17	chr11:85748423:-	LH00995:25:23T55JLT4:2:2219:20343:17128,LH00995:25:23T55JLT4:5:1159:29598:5414,LH00995:25:23T55JLT4:8:2387:33659:7628,LH00995:25:23T55JLT4:8:2439:28902:19398	.	YES_LDAS	0.0135	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"	chr11:85974708-chr11:85748423	False			0	Read count too low: 4 < 8	FAIL	4
PARVB--DKKL1P1	4	0	4.0	0.0	INCL_NON_REF_SPLICE	PARVB^ENSG00000188677.15	chr22:44094017:+	DKKL1P1^ENSG00000215546.2	chr20:31274402:+	LH00995:25:23T55JLT4:5:1178:17229:14956,LH00995:25:23T55JLT4:5:2170:51376:15755,LH00995:25:23T55JLT4:5:2383:34638:7446,LH00995:25:23T55JLT4:6:2422:2133:13751	.	NO_LDAS	0.0135	GT	1.9086	AG	1.4295	"[""INTERCHROMOSOMAL[chr22--chr20]""]"	chr22:44094017-chr20:31274402	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
IQCH-AS1--SRGAP2	4	0	4.0	0.0	ONLY_REF_SPLICE	IQCH-AS1^ENSG00000259673.6	chr15:67520192:-	SRGAP2^ENSG00000266028.7	chr1:206303281:+	LH00995:25:23T55JLT4:2:1246:38400:28730,LH00995:25:23T55JLT4:2:1339:10554:10767,LH00995:25:23T55JLT4:2:2135:5814:22761,LH00995:25:23T55JLT4:5:1389:42113:4391	.	YES_LDAS	0.0135	GT	1.7232	AG	1.9656	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:67520192-chr1:206303281	False			0	Read count too low: 4 < 8	FAIL	4
CA13--CA3	4	0	4.0	0.0	ONLY_REF_SPLICE	CA13^ENSG00000185015.8	chr8:85268627:+	CA3^ENSG00000164879.7	chr8:85439712:+	LH00995:25:23T55JLT4:2:1121:20764:13457,LH00995:25:23T55JLT4:2:2132:4495:21598,LH00995:25:23T55JLT4:5:1335:27333:14522,LH00995:25:23T55JLT4:6:2352:34396:29473	.	YES_LDAS	0.0135	GT	1.9086	AG	1.8892	"[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]"	chr8:85268627-chr8:85439712	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
C12orf65--THEM4	4	0	4.0	0.0	ONLY_REF_SPLICE	C12orf65^ENSG00000130921.9	chr12:123248480:+	THEM4^ENSG00000159445.13	chr1:151895194:-	LH00995:25:23T55JLT4:5:1442:38335:26012,LH00995:25:23T55JLT4:5:1475:47162:13891,LH00995:25:23T55JLT4:6:1179:14737:17703,LH00995:25:23T55JLT4:8:1402:38457:7530	.	NO_LDAS	0.0135	GT	1.8295	AG	1.7232	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:123248480-chr1:151895194	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
BIRC2--AP000619.1	4	0	4.0	0.0	ONLY_REF_SPLICE	BIRC2^ENSG00000110330.8	chr11:102368548:+	AP000619.1^ENSG00000225678.2	chr11:102753855:-	LH00995:25:23T55JLT4:2:2248:25480:8651,LH00995:25:23T55JLT4:6:2164:43084:23980,LH00995:25:23T55JLT4:8:1446:44427:2850,LH00995:25:23T55JLT4:8:2298:14923:11495	.	YES_LDAS	0.0135	GT	1.7968	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:0.37Mb]""]"	chr11:102368548-chr11:102753855	False			0	Read count too low: 4 < 8	FAIL	4
BAGE2--TPTEP1	4	0	4.0	0.0	ONLY_REF_SPLICE	BAGE2^ENSG00000187172.15	chr21:10516431:+	TPTEP1^ENSG00000100181.22	chr22:16622841:+	LH00995:25:23T55JLT4:2:1149:12601:13443,LH00995:25:23T55JLT4:5:1202:3273:13009,LH00995:25:23T55JLT4:5:2402:39557:6016,LH00995:25:23T55JLT4:8:2322:18361:13219	.	YES_LDAS	0.0135	GT	1.9899	AG	1.8892	"[""INTERCHROMOSOMAL[chr21--chr22]""]"	chr21:10516431-chr22:16622841	False			0	Read count too low: 4 < 8	FAIL	4
AP001347.1--ANKRD20A11P	4	0	2.0	0.0	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13979884:-	LH00995:25:23T55JLT4:2:1216:36628:19244,LH00995:25:23T55JLT4:2:2146:43626:22621,LH00995:25:23T55JLT4:8:1446:16476:17549,LH00995:25:23T55JLT4:8:2142:36887:13723	.	YES_LDAS	0.0068	GT	1.8323	AG	1.5656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13979884	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	4
AL359771.1--NPM1P40	4	0	4.0	0.0	INCL_NON_REF_SPLICE	AL359771.1^ENSG00000237445.2	chr1:13657302:-	NPM1P40^ENSG00000236523.2	chr1:203256068:+	LH00995:25:23T55JLT4:2:1485:10020:9954,LH00995:25:23T55JLT4:5:1133:16509:6647,LH00995:25:23T55JLT4:5:1481:17843:5652,LH00995:25:23T55JLT4:5:2406:32680:13611	.	NO_LDAS	0.0135	GT	1.9656	AG	1.7056	"[""INTRACHROMOSOMAL[chr1:189.60Mb]""]"	chr1:13657302-chr1:203256068	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	4
AC093895.1--SPARCL1	4	0	4.0	0.0	ONLY_REF_SPLICE	AC093895.1^ENSG00000249001.5	chr4:87672990:-	SPARCL1^ENSG00000152583.13	chr4:87499585:-	LH00995:25:23T55JLT4:2:2348:27309:29361,LH00995:25:23T55JLT4:6:1477:13426:2289,LH00995:25:23T55JLT4:6:2352:39161:10823,LH00995:25:23T55JLT4:8:1170:47493:16259	.	YES_LDAS	0.0135	GT	1.9656	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr4:0.04Mb]"",""NEIGHBORS[36974]""]"	chr4:87672990-chr4:87499585	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
AC092691.1--LSAMP	4	0	4.0	0.0	ONLY_REF_SPLICE	AC092691.1^ENSG00000239268.3	chr3:117997182:-	LSAMP^ENSG00000185565.12	chr3:116444955:-	LH00995:25:23T55JLT4:2:1272:12035:12602,LH00995:25:23T55JLT4:2:2265:14939:2499,LH00995:25:23T55JLT4:5:2152:25116:5666,LH00995:25:23T55JLT4:6:2322:19089:1645	.	YES_LDAS	0.0135	GT	1.8892	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.53Mb]""]"	chr3:117997182-chr3:116444955	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
AC026191.1--SRGAP3	4	0	4.0	0.0	ONLY_REF_SPLICE	AC026191.1^ENSG00000254485.5	chr3:9326010:-	SRGAP3^ENSG00000196220.16	chr3:9124917:-	LH00995:25:23T55JLT4:5:1159:50025:15825,LH00995:25:23T55JLT4:6:1169:24938:15895,LH00995:25:23T55JLT4:6:1250:4374:7123,LH00995:25:23T55JLT4:6:2297:7456:23588	.	YES_LDAS	0.0135	GT	1.9656	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS[42903]""]"	chr3:9326010-chr3:9124917	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
ZNF720--AC098826.1	3	0	0.5	0.0	ONLY_REF_SPLICE	ZNF720^ENSG00000197302.10	chr16:31723353:+	AC098826.1^ENSG00000225594.1	chr2:132087289:+	LH00995:25:23T55JLT4:6:1105:32502:6605,LH00995:25:23T55JLT4:6:1204:44112:22565,LH00995:25:23T55JLT4:8:1361:25715:17773	.	NO_LDAS	0.0017	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr2]""]"	chr16:31723353-chr2:132087289	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
ZNF720--AC095038.1	3	0	1.5	0.0	INCL_NON_REF_SPLICE	ZNF720^ENSG00000197302.10	chr16:31723353:+	AC095038.1^ENSG00000228303.1	chr7:56650697:-	LH00995:25:23T55JLT4:5:1420:22981:22985,LH00995:25:23T55JLT4:6:2415:21322:2093,LH00995:25:23T55JLT4:8:1133:16832:13541	.	YES_LDAS	0.0051	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr16--chr7]""]"	chr16:31723353-chr7:56650697	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
TPTEP1--AL356585.3	3	0	0.64	0.0	ONLY_REF_SPLICE	TPTEP1^ENSG00000100181.22	chr22:16622897:+	AL356585.3^ENSG00000279231.1	chr13:18347052:+	LH00995:25:23T55JLT4:5:1428:25731:15643,LH00995:25:23T55JLT4:8:1153:41183:8160,LH00995:25:23T55JLT4:8:2159:9503:21836	.	YES_LDAS	0.0022	GT	1.9656	AG	1.8323	"[""INTERCHROMOSOMAL[chr22--chr13]""]"	chr22:16622897-chr13:18347052	False			0	Read count too low: 3 < 8	FAIL	3
SEPTIN14--AL031259.1	3	0	1.5	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AL031259.1^ENSG00000287411.1	chr6:170614324:+	LH00995:25:23T55JLT4:6:1188:28190:19230,LH00995:25:23T55JLT4:6:1289:3411:24344,LH00995:25:23T55JLT4:6:2252:39217:20085	.	YES_LDAS	0.0051	GT	1.5546	AG	1.9086	"[""INTERCHROMOSOMAL[chr7--chr6]""]"	chr7:55795924-chr6:170614324	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
SDHAP3--AC026412.1	3	0	3.0	0.0	ONLY_REF_SPLICE	SDHAP3^ENSG00000185986.12	chr5:1593113:-	AC026412.1^ENSG00000188002.10	chr5:1599827:-	LH00995:25:23T55JLT4:8:1198:27794:22691,LH00995:25:23T55JLT4:8:1485:16905:25998,LH00995:25:23T55JLT4:8:2231:13200:29445	.	YES_LDAS	0.0102	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4300]""]"	chr5:1593113-chr5:1599827	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
RPL36AP16--AC024995.1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	RPL36AP16^ENSG00000232228.1	chr2:69594829:-	AC024995.1^ENSG00000253945.1	chr8:95403814:+	LH00995:25:23T55JLT4:8:1115:28935:17577,LH00995:25:23T55JLT4:8:1348:46660:10500,LH00995:25:23T55JLT4:8:2331:13167:16666	.	YES_LDAS	0.0102	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr8]""]"	chr2:69594829-chr8:95403814	False			0	Read count too low: 3 < 8	FAIL	3
PRR16--AC114284.1	3	0	3.0	0.0	ONLY_REF_SPLICE	PRR16^ENSG00000184838.15	chr5:120464645:+	AC114284.1^ENSG00000248927.1	chr5:120789954:+	LH00995:25:23T55JLT4:2:1220:29461:10080,LH00995:25:23T55JLT4:2:2466:30658:4083,LH00995:25:23T55JLT4:5:2460:3945:1897	.	YES_LDAS	0.0102	GT	1.6895	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.09Mb]"",""NEIGHBORS[93886]""]"	chr5:120464645-chr5:120789954	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
PCGF6--MNX1	3	0	1.5	0.0	INCL_NON_REF_SPLICE	PCGF6^ENSG00000156374.16	chr10:103350983:-	MNX1^ENSG00000130675.15	chr7:157005174:-	LH00995:25:23T55JLT4:2:2144:42615:5988,LH00995:25:23T55JLT4:2:2179:14907:2611,LH00995:25:23T55JLT4:5:1220:33441:24260	.	NO_LDAS	0.0051	GT	1.2419	AG	1.231	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:103350983-chr7:157005174	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
PCGF6--C10orf99	3	0	1.5	0.0	INCL_NON_REF_SPLICE	PCGF6^ENSG00000156374.16	chr10:103350983:-	C10orf99^ENSG00000188373.5	chr10:84184831:+	LH00995:25:23T55JLT4:2:2144:42615:5988,LH00995:25:23T55JLT4:2:2179:14907:2611,LH00995:25:23T55JLT4:5:1220:33441:24260	.	NO_LDAS	0.0051	GT	1.2419	AG	1.231	"[""INTRACHROMOSOMAL[chr10:19.12Mb]""]"	chr10:103350983-chr10:84184831	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
ELAPOR2--TMEM243	3	0	3.0	0.0	ONLY_REF_SPLICE	ELAPOR2^ENSG00000164659.15	chr7:86897506:-	TMEM243^ENSG00000135185.12	chr7:87199057:-	LH00995:25:23T55JLT4:2:1178:29849:24232,LH00995:25:23T55JLT4:5:2284:41094:17591,LH00995:25:23T55JLT4:8:2176:18086:14116	.	YES_LDAS	0.0102	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.14Mb]""]"	chr7:86897506-chr7:87199057	False			0	Read count too low: 3 < 8	FAIL	3
EFCAB11--AL137230.1	3	0	3.0	0.0	ONLY_REF_SPLICE	EFCAB11^ENSG00000140025.16	chr14:89931541:-	AL137230.1^ENSG00000258792.4	chr14:89629136:-	LH00995:25:23T55JLT4:5:1128:29339:23041,LH00995:25:23T55JLT4:8:1154:13022:17759,LH00995:25:23T55JLT4:8:1290:16735:13821	.	YES_LDAS	0.0102	GT	1.8892	AG	1.8892	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.15Mb]""]"	chr14:89931541-chr14:89629136	False			0	Read count too low: 3 < 8	FAIL	3
BIRC2--GLIS3	3	0	3.0	0.0	ONLY_REF_SPLICE	BIRC2^ENSG00000110330.8	chr11:102368548:+	GLIS3^ENSG00000107249.23	chr9:4125941:-	LH00995:25:23T55JLT4:2:1105:26427:5610,LH00995:25:23T55JLT4:5:1126:31499:16021,LH00995:25:23T55JLT4:5:2428:36014:25101	.	YES_LDAS	0.0102	GT	1.7968	AG	1.5219	"[""INTERCHROMOSOMAL[chr11--chr9]""]"	chr11:102368548-chr9:4125941	False			0	Read count too low: 3 < 8	FAIL	3
ACTR3C--AC092681.1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	ACTR3C^ENSG00000106526.10	chr7:150284753:-	AC092681.1^ENSG00000224016.2	chr7:149909705:-	LH00995:25:23T55JLT4:5:2180:16581:21178,LH00995:25:23T55JLT4:5:2423:27325:4643,LH00995:25:23T55JLT4:8:2327:41636:19650	.	YES_LDAS	0.0102	GT	1.9899	AG	1.9899	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]"	chr7:150284753-chr7:149909705	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
AC008740.1--CRYM-AS1	3	0	3.0	0.0	ONLY_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21315884:+	LH00995:25:23T55JLT4:5:2484:49524:24176,LH00995:25:23T55JLT4:6:2267:34654:21094,LH00995:25:23T55JLT4:6:2285:43238:1490	.	YES_LDAS	0.0102	GT	1.7232	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"	chr16:21352138-chr16:21315884	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
TMEM14DP--SYCP2L	2	0	2.0	0.0	INCL_NON_REF_SPLICE	TMEM14DP^ENSG00000214881.4	chr10:68544734:-	SYCP2L^ENSG00000153157.13	chr6:10891513:+	LH00995:25:23T55JLT4:2:2463:13281:11705,LH00995:25:23T55JLT4:8:1321:10983:17030	.	YES_LDAS	0.0068	GC	1.8295	AG	1.6049	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:68544734-chr6:10891513	False			0	Read count too low: 2 < 8	FAIL	2
TMEFF2--TEX41	2	0	2.0	0.0	ONLY_REF_SPLICE	TMEFF2^ENSG00000144339.12	chr2:191998262:-	TEX41^ENSG00000226674.11	chr2:144766370:+	LH00995:25:23T55JLT4:6:1261:36353:29501,LH00995:25:23T55JLT4:6:2358:28498:20968	.	YES_LDAS	0.0068	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr2:46.69Mb]""]"	chr2:191998262-chr2:144766370	False			0	Read count too low: 2 < 8	FAIL	2
RPL23AP53--SEPTIN14	2	0	2.0	0.0	ONLY_REF_SPLICE	RPL23AP53^ENSG00000223508.5	chr8:232129:-	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	LH00995:25:23T55JLT4:6:2177:18887:20379,LH00995:25:23T55JLT4:8:1180:15991:12000	.	YES_LDAS	0.0068	GT	1.9086	AG	1.9899	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:232129-chr7:55796092	True		aih_curated_blacklist score(5)	0	aih_curated_blacklist score(5)	FAIL	2
PINX1--RP1L1	2	0	2.0	0.0	ONLY_REF_SPLICE	PINX1^ENSG00000254093.9	chr8:10826152:-	RP1L1^ENSG00000183638.6	chr8:10623220:-	LH00995:25:23T55JLT4:2:2189:24097:6339,LH00995:25:23T55JLT4:6:2138:49152:6745	.	YES_LDAS	0.0068	GT	1.7232	AG	1.4566	"[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]"	chr8:10826152-chr8:10623220	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
NCOR1--AC108156.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	NCOR1^ENSG00000141027.21	chr17:16146495:-	AC108156.1^ENSG00000249752.1	chr4:149062506:-	LH00995:25:23T55JLT4:2:2163:11776:11117,LH00995:25:23T55JLT4:2:2209:23272:12308	.	NO_LDAS	0.0068	GT	1.5329	AG	1.6895	"[""INTERCHROMOSOMAL[chr17--chr4]""]"	chr17:16146495-chr4:149062506	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
LINC01002--SEPTIN14	2	0	2.0	0.0	ONLY_REF_SPLICE	LINC01002^ENSG00000282508.2	chr19:203875:-	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	LH00995:25:23T55JLT4:8:2312:2634:5456,LH00995:25:23T55JLT4:8:2455:33506:18375	.	YES_LDAS	0.0068	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr19--chr7]""]"	chr19:203875-chr7:55796092	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
GOLGA6L10--UBE2Q2P1	2	0	0.33	0.0	ONLY_REF_SPLICE	GOLGA6L10^ENSG00000278662.5	chr15:82345809:-	UBE2Q2P1^ENSG00000189136.9	chr15:84542284:-	LH00995:25:23T55JLT4:6:1385:25205:24344,LH00995:25:23T55JLT4:6:2287:23701:28604	.	YES_LDAS	0.0011	GT	1.7465	AG	1.7465	"[""INTRACHROMOSOMAL[chr15:2.18Mb]""]"	chr15:82345809-chr15:84542284	False			0	Read count too low: 2 < 8	FAIL	2
GLYATL2--GLYAT	2	0	2.0	0.0	ONLY_REF_SPLICE	GLYATL2^ENSG00000156689.7	chr11:58904156:-	GLYAT^ENSG00000149124.11	chr11:58724511:-	LH00995:25:23T55JLT4:5:1366:4738:11397,LH00995:25:23T55JLT4:8:2415:30682:26040	.	YES_LDAS	0.0068	GT	1.7465	AG	1.9656	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.10Mb]""]"	chr11:58904156-chr11:58724511	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
CNTROB--NAV2-AS2	2	0	2.0	0.0	INCL_NON_REF_SPLICE	CNTROB^ENSG00000170037.14	chr17:7948271:+	NAV2-AS2^ENSG00000254453.1	chr11:20049043:-	LH00995:25:23T55JLT4:8:2417:32147:23644,LH00995:25:23T55JLT4:8:2417:32155:23630	.	YES_LDAS	0.0068	GC	1.8256	AG	1.9656	"[""INTERCHROMOSOMAL[chr17--chr11]""]"	chr17:7948271-chr11:20049043	False			0	Read count too low: 2 < 8	FAIL	2
AP001347.1--ANKRD20A11P	2	0	2.0	0.0	ONLY_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13951260:-	LH00995:25:23T55JLT4:5:2253:30617:10907,LH00995:25:23T55JLT4:5:2460:39751:19104	.	YES_LDAS	0.0068	GT	1.8323	AG	1.8323	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13951260	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	2
AP001347.1--ANKRD20A11P	2	0	2.0	0.0	ONLY_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13940978:-	LH00995:25:23T55JLT4:2:2268:48132:21850,LH00995:25:23T55JLT4:8:2143:6420:28212	.	YES_LDAS	0.0068	GT	1.8323	AG	1.6402	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13940978	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	2
AP001347.1--ANKRD20A11P	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13972057:-	LH00995:25:23T55JLT4:2:1494:49394:3915,LH00995:25:23T55JLT4:2:2239:4123:10136	.	YES_LDAS	0.0068	GT	1.8323	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13972057	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	2
AL670729.1--BEND6	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AL670729.1^ENSG00000270094.1	chr1:228395806:+	BEND6^ENSG00000151917.18	chr6:56992380:+	LH00995:25:23T55JLT4:2:2327:20133:20407,LH00995:25:23T55JLT4:8:2443:23296:26951	.	YES_LDAS	0.0068	GT	1.8892	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr6]""]"	chr1:228395806-chr6:56992380	False			0	Read count too low: 2 < 8	FAIL	2
AL139042.1--CNR1	2	0	2.0	0.0	ONLY_REF_SPLICE	AL139042.1^ENSG00000234426.3	chr6:88298861:-	CNR1^ENSG00000118432.12	chr6:88145337:-	LH00995:25:23T55JLT4:5:1423:19081:26320,LH00995:25:23T55JLT4:8:1140:2456:28184	.	YES_LDAS	0.0068	GT	1.4716	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[11445]""]"	chr6:88298861-chr6:88145337	False			0	Read count too low: 2 < 8	FAIL	2
AL008729.1--TYW1	2	0	1.0	0.0	ONLY_REF_SPLICE	AL008729.1^ENSG00000215022.7	chr6:13281429:-	TYW1^ENSG00000198874.13	chr7:67183126:+	LH00995:25:23T55JLT4:6:1328:16743:17759,LH00995:25:23T55JLT4:8:2106:27883:26825	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""INTERCHROMOSOMAL[chr6--chr7]""]"	chr6:13281429-chr7:67183126	False			0	Read count too low: 2 < 8	FAIL	2
AGAP12P--AC022400.4	2	0	0.4	0.0	INCL_NON_REF_SPLICE	AGAP12P^ENSG00000265018.6	chr10:48025897:-	AC022400.4^ENSG00000272140.2	chr10:73713326:-	LH00995:25:23T55JLT4:2:1234:3556:13191,LH00995:25:23T55JLT4:8:2357:15174:25437	.	NO_LDAS	0.0014	GT	1.7465	AG	1.7819	"[""INTRACHROMOSOMAL[chr10:25.67Mb]""]"	chr10:48025897-chr10:73713326	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
AC138393.1--AC015802.6	2	0	0.67	0.0	INCL_NON_REF_SPLICE	AC138393.1^ENSG00000229930.1	chr1:224030704:-	AC015802.6^ENSG00000284526.1	chr17:76564707:-	LH00995:25:23T55JLT4:2:2111:33878:7810,LH00995:25:23T55JLT4:5:2155:41183:7628	.	NO_LDAS	0.0023	GT	1.7819	AG	1.7056	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:224030704-chr17:76564707	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
AC096582.2--SEPTIN14	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC096582.2^ENSG00000251378.1	chr7:45818677:+	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	LH00995:25:23T55JLT4:2:2243:18442:2261,LH00995:25:23T55JLT4:6:1102:46433:2485	.	YES_LDAS	0.0068	GT	1.8892	AG	1.9899	"[""INTRACHROMOSOMAL[chr7:9.97Mb]""]"	chr7:45818677-chr7:55796092	False			0	Read count too low: 2 < 8	FAIL	2
AC026150.1--GOLGA6L10	2	0	0.22	0.0	ONLY_REF_SPLICE	AC026150.1^ENSG00000260693.1	chr15:30544660:+	GOLGA6L10^ENSG00000278662.5	chr15:82347629:-	LH00995:25:23T55JLT4:2:1101:38667:26895,LH00995:25:23T55JLT4:5:1287:50972:22677	.	YES_LDAS	0.0007	GT	1.8323	AG	1.7819	"[""INTRACHROMOSOMAL[chr15:51.79Mb]""]"	chr15:30544660-chr15:82347629	False			0	Read count too low: 2 < 8	FAIL	2
AC007562.1--GOLGA6L10	2	0	0.22	0.0	ONLY_REF_SPLICE	AC007562.1^ENSG00000235583.2	chrY:25512301:-	GOLGA6L10^ENSG00000278662.5	chr15:82347629:-	LH00995:25:23T55JLT4:2:1101:38667:26895,LH00995:25:23T55JLT4:5:1287:50972:22677	.	YES_LDAS	0.0007	GT	1.8323	AG	1.7819	"[""INTERCHROMOSOMAL[chrY--chr15]""]"	chrY:25512301-chr15:82347629	False			0	Read count too low: 2 < 8	FAIL	2
AC005323.2--AC005323.1	2	0	2.0	0.0	ONLY_REF_SPLICE	AC005323.2^ENSG00000272736.5	chr17:10406238:+	AC005323.1^ENSG00000214970.8	chr17:10608354:+	LH00995:25:23T55JLT4:2:2190:43238:15082,LH00995:25:23T55JLT4:6:1242:39614:22229	.	YES_LDAS	0.0068	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.04Mb]"",""NEIGHBORS[41178]""]"	chr17:10406238-chr17:10608354	False			0	Read count too low: 2 < 8	FAIL	2
TVP23C--TEKT3	2	1	2.0	1.0	ONLY_REF_SPLICE	TVP23C^ENSG00000175106.17	chr17:15540433:-	TEKT3^ENSG00000125409.13	chr17:15331614:-	LH00995:25:23T55JLT4:6:2133:49443:3018,LH00995:25:23T55JLT4:8:2455:5943:5386	LH00995:25:23T55JLT4:2:1338:9786:28436	YES_LDAS	0.0102	GT	1.8323	AG	1.7465	"[""INTRACHROMOSOMAL[chr17:0.16Mb]""]"	chr17:15540433-chr17:15331614	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
ZSCAN16-AS1--EIF4BP6	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ZSCAN16-AS1^ENSG00000269293.3	chr6:28136745:-	EIF4BP6^ENSG00000197258.5	chr7:104669317:+	LH00995:25:23T55JLT4:6:1257:37292:13919	.	YES_LDAS	0.0017	GT	1.8892	AG	1.371	"[""INTERCHROMOSOMAL[chr6--chr7]""]"	chr6:28136745-chr7:104669317	False			0	Read count too low: 1 < 8	FAIL	1
ZNF804A--AC015712.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF804A^ENSG00000170396.9	chr2:184866512:+	AC015712.1^ENSG00000232386.9	chr15:100855233:+	LH00995:25:23T55JLT4:5:2142:12213:1280	.	NO_LDAS	0.0034	GT	1.9086	AG	1.5219	"[""INTERCHROMOSOMAL[chr2--chr15]""]"	chr2:184866512-chr15:100855233	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF77--AC119403.1	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF77^ENSG00000175691.9	chr19:2936524:-	AC119403.1^ENSG00000253392.3	chr19:2919174:-	LH00995:25:23T55JLT4:2:1353:38052:12546	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7819	"[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[6401]""]"	chr19:2936524-chr19:2919174	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ZNF736P10Y--ZSCAN12	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF736P10Y^ENSG00000216824.2	chrY:8419362:-	ZSCAN12^ENSG00000158691.14	chr6:28391361:-	LH00995:25:23T55JLT4:2:2352:2408:18347	.	YES_LDAS	0.0034	GT	1.3996	AG	1.9656	"[""INTERCHROMOSOMAL[chrY--chr6]""]"	chrY:8419362-chr6:28391361	False			0	Read count too low: 1 < 8	FAIL	1
ZNF695--ABHD12B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF695^ENSG00000197472.15	chr1:246999348:-	ABHD12B^ENSG00000131969.15	chr14:50891971:+	LH00995:25:23T55JLT4:8:2190:20772:8342	.	NO_LDAS	0.0034	GT	1.7819	AG	1.3753	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:246999348-chr14:50891971	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF678--LINC00886	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF678^ENSG00000181450.18	chr1:227655161:+	LINC00886^ENSG00000240875.6	chr3:156748218:-	LH00995:25:23T55JLT4:6:1338:19389:14858	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:227655161-chr3:156748218	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF649--SIGLEC6	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF649^ENSG00000198093.11	chr19:51896472:-	SIGLEC6^ENSG00000105492.16	chr19:51520255:-	LH00995:25:23T55JLT4:6:2218:40787:2457	.	YES_LDAS	0.0034	GT	1.6729	AG	1.9329	"[""INTRACHROMOSOMAL[chr19:0.36Mb]""]"	chr19:51896472-chr19:51520255	False			0	Read count too low: 1 < 8	FAIL	1
ZNF624--TXNDC16	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF624^ENSG00000197566.10	chr17:16633862:-	TXNDC16^ENSG00000087301.9	chr14:52457174:-	LH00995:25:23T55JLT4:5:2339:28223:7740	.	NO_LDAS	0.0034	GT	1.9086	AG	1.6402	"[""INTERCHROMOSOMAL[chr17--chr14]""]"	chr17:16633862-chr14:52457174	False			0	Read count too low: 1 < 8	FAIL	1
ZNF37BP--ZNF383	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF37BP^ENSG00000234420.7	chr10:42525540:-	ZNF383^ENSG00000188283.11	chr19:37235549:+	LH00995:25:23T55JLT4:2:1268:47857:23111	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr10--chr19]""]"	chr10:42525540-chr19:37235549	False			0	Read count too low: 1 < 8	FAIL	1
ZNF248--EPM2A	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF248^ENSG00000198105.16	chr10:37856296:-	EPM2A^ENSG00000112425.16	chr6:145686296:-	LH00995:25:23T55JLT4:6:1326:38238:9982	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:37856296-chr6:145686296	False			0	Read count too low: 1 < 8	FAIL	1
ZNF226--AC116337.1	1	0	0.1	0.0	INCL_NON_REF_SPLICE	ZNF226^ENSG00000167380.16	chr19:44172952:+	AC116337.1^ENSG00000196390.6	chr5:74929895:+	LH00995:25:23T55JLT4:2:2368:32397:21864	.	NO_LDAS	0.0003	GT	1.7819	AG	1.9219	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:44172952-chr5:74929895	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF182--IFT74	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF182^ENSG00000147118.12	chrX:48002595:-	IFT74^ENSG00000096872.17	chr9:26978128:+	LH00995:25:23T55JLT4:8:2127:36256:19776	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr9]""]"	chrX:48002595-chr9:26978128	False			0	Read count too low: 1 < 8	FAIL	1
ZNF157--CRYBA4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF157^ENSG00000147117.8	chrX:47414154:+	CRYBA4^ENSG00000196431.4	chr22:26628288:+	LH00995:25:23T55JLT4:8:1140:17665:14788	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chrX--chr22]""]"	chrX:47414154-chr22:26628288	False			0	Read count too low: 1 < 8	FAIL	1
ZNF14--AC078899.2	1	0	0.2	0.0	ONLY_REF_SPLICE	ZNF14^ENSG00000105708.9	chr19:19732956:-	AC078899.2^ENSG00000268461.2	chr19:20389658:+	LH00995:25:23T55JLT4:5:2335:51878:27609	.	YES_LDAS	0.0007	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr19:0.66Mb]""]"	chr19:19732956-chr19:20389658	False			0	Read count too low: 1 < 8	FAIL	1
ZKSCAN7-AS1--ZNF852	1	0	1.0	0.0	ONLY_REF_SPLICE	ZKSCAN7-AS1^ENSG00000236869.1	chr3:44661262:-	ZNF852^ENSG00000178917.17	chr3:44502668:-	LH00995:25:23T55JLT4:2:2412:29161:8244	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:0.05Mb]"",""NEIGHBORS[46721]""]"	chr3:44661262-chr3:44502668	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ZDHHC1--LRRC37BP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZDHHC1^ENSG00000159714.12	chr16:67394519:-	LRRC37BP1^ENSG00000250462.8	chr17:30631820:+	LH00995:25:23T55JLT4:8:2480:27851:15194	.	YES_LDAS	0.0034	GC	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr16--chr17]""]"	chr16:67394519-chr17:30631820	False			0	Read count too low: 1 < 8	FAIL	1
ZBED3-AS1--PDE8B	1	0	1.0	0.0	ONLY_REF_SPLICE	ZBED3-AS1^ENSG00000250802.7	chr5:77118521:+	PDE8B^ENSG00000113231.14	chr5:77311994:+	LH00995:25:23T55JLT4:6:1170:24445:4111	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]"	chr5:77118521-chr5:77311994	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
Z68871.1--LINC00630	1	0	1.0	0.0	INCL_NON_REF_SPLICE	Z68871.1^ENSG00000239407.5	chrX:102905737:+	LINC00630^ENSG00000223546.7	chrX:102839801:+	LH00995:25:23T55JLT4:5:1293:4899:29305	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5058	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chrX:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[992]""]"	chrX:102905737-chrX:102839801	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
YWHAZP3--LINC02225	1	0	0.5	0.0	INCL_NON_REF_SPLICE	YWHAZP3^ENSG00000229932.3	chr10:23137216:+	LINC02225^ENSG00000249584.1	chr5:57897033:-	LH00995:25:23T55JLT4:8:1320:36677:18627	.	YES_LDAS	0.0017	GT	1.9656	AG	1.6729	"[""INTERCHROMOSOMAL[chr10--chr5]""]"	chr10:23137216-chr5:57897033	False			0	Read count too low: 1 < 8	FAIL	1
XRCC6P2--CNGB1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	XRCC6P2^ENSG00000234825.3	chrX:150232166:-	CNGB1^ENSG00000070729.14	chr16:57937129:-	LH00995:25:23T55JLT4:6:2106:41555:1350	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr16]""]"	chrX:150232166-chr16:57937129	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
XKR6--PINX1	1	0	1.0	0.0	ONLY_REF_SPLICE	XKR6^ENSG00000171044.11	chr8:11200576:-	PINX1^ENSG00000254093.9	chr8:10834775:-	LH00995:25:23T55JLT4:8:1208:27721:18249	.	YES_LDAS	0.0034	GT	1.4256	AG	1.7465	"[""INTRACHROMOSOMAL[chr8:0.06Mb]"",""NEIGHBORS[56161]""]"	chr8:11200576-chr8:10834775	False			0	Read count too low: 1 < 8	FAIL	1
XKR6--AL158212.1	1	0	1.0	0.0	ONLY_REF_SPLICE	XKR6^ENSG00000171044.11	chr8:11200576:-	AL158212.1^ENSG00000225292.2	chr10:112888735:+	LH00995:25:23T55JLT4:6:2454:21670:17997	.	YES_LDAS	0.0034	GT	1.4256	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr10]""]"	chr8:11200576-chr10:112888735	False			0	Read count too low: 1 < 8	FAIL	1
UPK3BL2--BEGAIN	1	0	1.0	0.0	INCL_NON_REF_SPLICE	UPK3BL2^ENSG00000284981.1	chr7:102540015:-	BEGAIN^ENSG00000183092.16	chr14:100538386:-	LH00995:25:23T55JLT4:2:1238:40350:1532	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""INTERCHROMOSOMAL[chr7--chr14]""]"	chr7:102540015-chr14:100538386	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ULK4P1--GOLGA8J	1	0	0.33	0.0	INCL_NON_REF_SPLICE	ULK4P1^ENSG00000261279.5	chr15:32406998:-	GOLGA8J^ENSG00000179938.12	chr15:30084771:+	LH00995:25:23T55JLT4:2:1469:22244:29697	.	YES_LDAS	0.0011	GT	1.9656	AG	1.5058	"[""INTRACHROMOSOMAL[chr15:2.31Mb]""]"	chr15:32406998-chr15:30084771	False			0	Read count too low: 1 < 8	FAIL	1
TRMT61B--AC007347.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TRMT61B^ENSG00000171103.11	chr2:28865017:-	AC007347.2^ENSG00000280454.1	chr16:54114740:-	LH00995:25:23T55JLT4:2:1390:39508:13079	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:28865017-chr16:54114740	False			0	Read count too low: 1 < 8	FAIL	1
TRAV8-6--TRAC	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TRAV8-6^ENSG00000211795.3	chr14:21978940:+	TRAC^ENSG00000277734.8	chr14:22547506:+	LH00995:25:23T55JLT4:2:2410:43602:26783	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr14:0.57Mb]""]"	chr14:21978940-chr14:22547506	True	pair|T-cell receptors; pair|recurrent breakpoints; pair|T-cell receptors		0	Blacklisted	FAIL	1
TPTE2--MRPS31P2	1	0	1.0	0.0	ONLY_REF_SPLICE	TPTE2^ENSG00000132958.17	chr13:19475573:-	MRPS31P2^ENSG00000232894.1	chr13:19570288:-	LH00995:25:23T55JLT4:6:1353:9017:28254	.	NO_LDAS	0.0034	GT	1.8295	AG	1.9656	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[15809]""]"	chr13:19475573-chr13:19570288	True		aih_curated_blacklist score(4)	0	aih_curated_blacklist score(4)	FAIL	1
TPTE2--AC013734.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	TPTE2^ENSG00000132958.17	chr13:19492850:-	AC013734.1^ENSG00000277146.1	chrY:26453985:+	LH00995:25:23T55JLT4:5:2111:2529:10682	.	YES_LDAS	0.0011	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr13--chrY]""]"	chr13:19492850-chrY:26453985	False			0	Read count too low: 1 < 8	FAIL	1
TMEM244--L3MBTL3	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM244^ENSG00000203756.8	chr6:129861156:-	L3MBTL3^ENSG00000198945.8	chr6:130022227:+	LH00995:25:23T55JLT4:5:1373:3597:10851	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8295	"[""INTRACHROMOSOMAL[chr6:0.15Mb]""]"	chr6:129861156-chr6:130022227	False			0	Read count too low: 1 < 8	FAIL	1
THAP2--DPY19L2	1	0	1.0	0.0	ONLY_REF_SPLICE	THAP2^ENSG00000173451.7	chr12:71664580:+	DPY19L2^ENSG00000177990.12	chr12:63663845:-	LH00995:25:23T55JLT4:8:2453:46247:13541	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTRACHROMOSOMAL[chr12:8.00Mb]""]"	chr12:71664580-chr12:63663845	False			0	Read count too low: 1 < 8	FAIL	1
TAS2R14--PRR4	1	0	1.0	0.0	ONLY_REF_SPLICE	TAS2R14^ENSG00000212127.6	chr12:11034782:-	PRR4^ENSG00000111215.12	chr12:10848407:-	LH00995:25:23T55JLT4:2:2430:29970:9029	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8062	"[""INTRACHROMOSOMAL[chr12:0.09Mb]"",""NEIGHBORS[87933]""]"	chr12:11034782-chr12:10848407	False			0	Read count too low: 1 < 8	FAIL	1
TAFA1--SUCLG2-AS1	1	0	1.0	0.0	ONLY_REF_SPLICE	TAFA1^ENSG00000183662.11	chr3:68006744:+	SUCLG2-AS1^ENSG00000241316.8	chr3:67840022:+	LH00995:25:23T55JLT4:2:1127:39589:4335	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTRACHROMOSOMAL[chr3:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[56534]""]"	chr3:68006744-chr3:67840022	False			0	Read count too low: 1 < 8	FAIL	1
SULT1B1--AC099522.1	1	0	0.07	0.0	INCL_NON_REF_SPLICE	SULT1B1^ENSG00000173597.9	chr4:69749721:-	AC099522.1^ENSG00000249149.2	chr5:73410299:+	LH00995:25:23T55JLT4:2:2126:39848:9660	.	YES_LDAS	0.0002	GT	1.7232	AG	1.2867	"[""INTERCHROMOSOMAL[chr4--chr5]""]"	chr4:69749721-chr5:73410299	False			0	Read count too low: 1 < 8	FAIL	1
STARD13-AS--AUNIP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	STARD13-AS^ENSG00000236581.9	chr13:33274072:+	AUNIP^ENSG00000127423.11	chr1:25835695:-	LH00995:25:23T55JLT4:5:1475:23935:24695	.	YES_LDAS	0.0034	AT	1.8323	AC	1.9329	"[""INTERCHROMOSOMAL[chr13--chr1]""]"	chr13:33274072-chr1:25835695	False			0	Read count too low: 1 < 8	FAIL	1
SRP14P2--ASCL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SRP14P2^ENSG00000234106.3	chr11:93535812:+	ASCL1^ENSG00000139352.4	chr12:102958577:+	LH00995:25:23T55JLT4:8:2323:12237:29627	.	NO_LDAS	0.0034	GC	1.5656	AG	1.7465	"[""INTERCHROMOSOMAL[chr11--chr12]""]"	chr11:93535812-chr12:102958577	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SPATA6L--CDC37L1-DT	1	0	1.0	0.0	ONLY_REF_SPLICE	SPATA6L^ENSG00000106686.16	chr9:4661899:-	CDC37L1-DT^ENSG00000273061.1	chr9:4676749:-	LH00995:25:23T55JLT4:2:1208:27754:4125	.	YES_LDAS	0.0034	GT	1.5301	AG	1.8892	"[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9926]""]"	chr9:4661899-chr9:4676749	False			0	Read count too low: 1 < 8	FAIL	1
SOX5--ZNF385D	1	0	1.0	0.0	ONLY_REF_SPLICE	SOX5^ENSG00000134532.19	chr12:23845983:-	ZNF385D^ENSG00000151789.12	chr3:21665028:-	LH00995:25:23T55JLT4:2:1482:2052:1757	.	YES_LDAS	0.0034	GT	1.5058	AG	1.9656	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:23845983-chr3:21665028	False			0	Read count too low: 1 < 8	FAIL	1
SNTG1--ST18	1	0	1.0	0.0	ONLY_REF_SPLICE	SNTG1^ENSG00000147481.17	chr8:49912231:+	ST18^ENSG00000147488.11	chr8:52214257:-	LH00995:25:23T55JLT4:5:1234:4738:18655	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:1.31Mb]""]"	chr8:49912231-chr8:52214257	False			0	Read count too low: 1 < 8	FAIL	1
SMN2--MARVELD2	1	0	1.0	0.0	ONLY_REF_SPLICE	SMN2^ENSG00000205571.14	chr5:70070751:+	MARVELD2^ENSG00000152939.17	chr5:69424601:+	LH00995:25:23T55JLT4:5:2281:3265:26867	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""INTRACHROMOSOMAL[chr5:0.61Mb]""]"	chr5:70070751-chr5:69424601	False			0	Read count too low: 1 < 8	FAIL	1
SLC7A5P1--ADAT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC7A5P1^ENSG00000260727.2	chr16:29613107:-	ADAT2^ENSG00000189007.16	chr6:143427319:-	LH00995:25:23T55JLT4:5:1315:12464:17801	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6729	"[""INTERCHROMOSOMAL[chr16--chr6]""]"	chr16:29613107-chr6:143427319	False			0	Read count too low: 1 < 8	FAIL	1
SIGLEC6--AL451085.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SIGLEC6^ENSG00000105492.16	chr19:51519254:-	AL451085.2^ENSG00000271380.1	chr1:154961833:+	LH00995:25:23T55JLT4:2:2158:41547:25718	.	YES_LDAS	0.0017	GT	1.7232	AG	1.5656	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:51519254-chr1:154961833	False			0	Read count too low: 1 < 8	FAIL	1
SDHAP3--AC026412.1	1	0	1.0	0.0	ONLY_REF_SPLICE	SDHAP3^ENSG00000185986.12	chr5:1589247:-	AC026412.1^ENSG00000188002.10	chr5:1599827:-	LH00995:25:23T55JLT4:5:1490:9495:5596	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4300]""]"	chr5:1589247-chr5:1599827	False			0	Read count too low: 1 < 8	FAIL	1
SBF2-AS1--LRP2BP	1	0	1.0	0.0	ONLY_REF_SPLICE	SBF2-AS1^ENSG00000246273.8	chr11:9775765:+	LRP2BP^ENSG00000109771.16	chr4:185370814:-	LH00995:25:23T55JLT4:2:1166:11282:5218	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9899	"[""INTERCHROMOSOMAL[chr11--chr4]""]"	chr11:9775765-chr4:185370814	False			0	Read count too low: 1 < 8	FAIL	1
SATB1-AS1--TRAC	1	0	1.0	0.0	ONLY_REF_SPLICE	SATB1-AS1^ENSG00000228956.8	chr3:18527326:+	TRAC^ENSG00000277734.8	chr14:22547506:+	LH00995:25:23T55JLT4:5:1446:48140:27441	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr14]""]"	chr3:18527326-chr14:22547506	False			0	Read count too low: 1 < 8	FAIL	1
RTCA-AS1--FLACC1	1	0	1.0	0.0	ONLY_REF_SPLICE	RTCA-AS1^ENSG00000224616.3	chr1:100265815:-	FLACC1^ENSG00000155749.13	chr2:201344263:-	LH00995:25:23T55JLT4:2:1279:44880:5232	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8256	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:100265815-chr2:201344263	False			0	Read count too low: 1 < 8	FAIL	1
RSPO2--L3MBTL4	1	0	1.0	0.0	ONLY_REF_SPLICE	RSPO2^ENSG00000147655.12	chr8:108082545:-	L3MBTL4^ENSG00000154655.16	chr18:6312056:-	LH00995:25:23T55JLT4:6:1373:24267:28660	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9219	"[""INTERCHROMOSOMAL[chr8--chr18]""]"	chr8:108082545-chr18:6312056	False			0	Read count too low: 1 < 8	FAIL	1
RPSAP49--CHST8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPSAP49^ENSG00000226327.3	chr9:88325142:+	CHST8^ENSG00000124302.13	chr19:33684542:+	LH00995:25:23T55JLT4:6:1161:40835:18487	.	NO_LDAS	0.0034	GT	1.8062	AG	1.8256	"[""INTERCHROMOSOMAL[chr9--chr19]""]"	chr9:88325142-chr19:33684542	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPL17P50--RPL17P35	1	0	0.5	0.0	INCL_NON_REF_SPLICE	RPL17P50^ENSG00000213700.3	chr10:73006480:-	RPL17P35^ENSG00000233900.1	chr10:64620415:-	LH00995:25:23T55JLT4:6:2370:45972:27946	.	YES_LDAS	0.0017	GT	1.9656	AG	1.6402	"[""INTRACHROMOSOMAL[chr10:8.38Mb]""]"	chr10:73006480-chr10:64620415	False			0	Read count too low: 1 < 8	FAIL	1
RNFT1P3--AL358334.3	1	0	0.33	0.0	INCL_NON_REF_SPLICE	RNFT1P3^ENSG00000187870.7	chr17:20754483:-	AL358334.3^ENSG00000258745.1	chr14:50912285:+	LH00995:25:23T55JLT4:6:1294:33125:9926	.	NO_LDAS	0.0011	GC	1.8892	AG	1.7819	"[""INTERCHROMOSOMAL[chr17--chr14]""]"	chr17:20754483-chr14:50912285	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RMI1--CCR9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RMI1^ENSG00000178966.17	chr9:84001300:+	CCR9^ENSG00000173585.16	chr3:45901978:+	LH00995:25:23T55JLT4:2:2217:1299:27161	.	NO_LDAS	0.0034	GT	1.8323	AG	1.231	"[""INTERCHROMOSOMAL[chr9--chr3]""]"	chr9:84001300-chr3:45901978	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RBM39P1--C11orf1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RBM39P1^ENSG00000214019.2	chrX:44030604:+	C11orf1^ENSG00000137720.8	chr11:111883771:+	LH00995:25:23T55JLT4:6:1195:20206:22383	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTERCHROMOSOMAL[chrX--chr11]""]"	chrX:44030604-chr11:111883771	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RARB--AC092422.1	1	0	1.0	0.0	ONLY_REF_SPLICE	RARB^ENSG00000077092.19	chr3:25174575:+	AC092422.1^ENSG00000237838.1	chr3:25060125:+	LH00995:25:23T55JLT4:8:1209:41021:16988	.	YES_LDAS	0.0034	GT	1.6402	AG	1.7232	"[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[27]""]"	chr3:25174575-chr3:25060125	False			0	Read count too low: 1 < 8	FAIL	1
RAB3A--AC008771.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	RAB3A^ENSG00000105649.10	chr19:18198765:-	AC008771.1^ENSG00000249042.6	chr5:80488012:-	LH00995:25:23T55JLT4:2:1343:49071:10977	.	NO_LDAS	0.0008	GT	1.5546	AG	1.2867	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:18198765-chr5:80488012	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RAB38--AP000676.5	1	0	1.0	0.0	ONLY_REF_SPLICE	RAB38^ENSG00000123892.12	chr11:88149675:-	AP000676.5^ENSG00000285835.1	chr11:87954906:-	LH00995:25:23T55JLT4:5:2316:15255:23840	.	YES_LDAS	0.0034	GT	1.6729	AG	1.6402	"[""INTRACHROMOSOMAL[chr11:0.07Mb]"",""NEIGHBORS[67643]""]"	chr11:88149675-chr11:87954906	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
PTHLH--PEX3	1	0	1.0	0.0	ONLY_REF_SPLICE	PTHLH^ENSG00000087494.16	chr12:27969394:-	PEX3^ENSG00000034693.15	chr6:143459085:+	LH00995:25:23T55JLT4:5:2190:6347:17016	.	YES_LDAS	0.0034	GT	1.6729	AG	1.8062	"[""INTERCHROMOSOMAL[chr12--chr6]""]"	chr12:27969394-chr6:143459085	False			0	Read count too low: 1 < 8	FAIL	1
POLR2DP1--TG	1	0	1.0	0.0	INCL_NON_REF_SPLICE	POLR2DP1^ENSG00000232090.2	chr2:112995852:+	TG^ENSG00000042832.12	chr8:133094933:+	LH00995:25:23T55JLT4:5:1155:37834:6759	.	NO_LDAS	0.0034	AT	1.9899	AC	1.9656	"[""INTERCHROMOSOMAL[chr2--chr8]""]"	chr2:112995852-chr8:133094933	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PIK3R3--PLCG1-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PIK3R3^ENSG00000117461.15	chr1:46057399:-	PLCG1-AS1^ENSG00000226648.2	chr20:41112820:-	LH00995:25:23T55JLT4:5:2244:46587:24975	.	YES_LDAS	0.0034	GC	1.8295	AG	1.7968	"[""INTERCHROMOSOMAL[chr1--chr20]""]"	chr1:46057399-chr20:41112820	False			0	Read count too low: 1 < 8	FAIL	1
PEX3--AC015660.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PEX3^ENSG00000034693.15	chr6:143471611:+	AC015660.1^ENSG00000259341.2	chr15:99429961:-	LH00995:25:23T55JLT4:2:1357:5409:17296	.	NO_LDAS	0.0034	GT	1.5656	AG	1.8256	"[""INTERCHROMOSOMAL[chr6--chr15]""]"	chr6:143471611-chr15:99429961	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PEF1-AS1--TMEM59L	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PEF1-AS1^ENSG00000235790.7	chr1:31657075:+	TMEM59L^ENSG00000105696.9	chr19:18617020:+	LH00995:25:23T55JLT4:6:1361:46215:7544	.	NO_LDAS	0.0034	GT	1.7465	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:31657075-chr19:18617020	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PATE4--SPDYE21	1	0	0.5	0.0	INCL_NON_REF_SPLICE	PATE4^ENSG00000237353.7	chr11:125839390:+	SPDYE21^ENSG00000230358.4	chr7:67286119:+	LH00995:25:23T55JLT4:8:1291:34226:22481	.	YES_LDAS	0.0017	AT	1.9899	AC	1.7232	"[""INTERCHROMOSOMAL[chr11--chr7]""]"	chr11:125839390-chr7:67286119	False			0	Read count too low: 1 < 8	FAIL	1
OR7E36P--OR9I3P	1	0	0.5	0.0	INCL_NON_REF_SPLICE	OR7E36P^ENSG00000205240.4	chr13:41432038:-	OR9I3P^ENSG00000272685.1	chr11:58109491:-	LH00995:25:23T55JLT4:8:1487:47453:6437	.	NO_LDAS	0.0017	AT	1.5546	AC	1.7056	"[""INTERCHROMOSOMAL[chr13--chr11]""]"	chr13:41432038-chr11:58109491	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OR7E36P--OR1D2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	OR7E36P^ENSG00000205240.4	chr13:41432038:-	OR1D2^ENSG00000184166.2	chr17:3092826:-	LH00995:25:23T55JLT4:8:1487:47453:6437	.	NO_LDAS	0.0017	AT	1.5546	AC	1.7056	"[""INTERCHROMOSOMAL[chr13--chr17]""]"	chr13:41432038-chr17:3092826	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OPCML--TRPC6	1	0	1.0	0.0	ONLY_REF_SPLICE	OPCML^ENSG00000183715.13	chr11:132942926:-	TRPC6^ENSG00000137672.13	chr11:101504798:-	LH00995:25:23T55JLT4:6:2108:26637:27609	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9329	"[""INTRACHROMOSOMAL[chr11:30.54Mb]""]"	chr11:132942926-chr11:101504798	False			0	Read count too low: 1 < 8	FAIL	1
NTF6A--CGB1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	NTF6A^ENSG00000267019.1	chr19:49025643:-	CGB1^ENSG00000267631.5	chr19:49036744:-	LH00995:25:23T55JLT4:8:1357:48343:14732	.	NO_LDAS	0.0017	GT	1.5546	AG	1.9329	"[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9549]""]"	chr19:49025643-chr19:49036744	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NT5M--GABRR2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NT5M^ENSG00000205309.14	chr17:17346885:+	GABRR2^ENSG00000111886.11	chr6:89257194:-	LH00995:25:23T55JLT4:5:2406:23668:22046	.	YES_LDAS	0.0034	GC	1.3753	AG	1.9086	"[""INTERCHROMOSOMAL[chr17--chr6]""]"	chr17:17346885-chr6:89257194	False			0	Read count too low: 1 < 8	FAIL	1
NLRP14--ZNF215	1	0	1.0	0.0	ONLY_REF_SPLICE	NLRP14^ENSG00000158077.5	chr11:7070456:+	ZNF215^ENSG00000149054.16	chr11:6955690:+	LH00995:25:23T55JLT4:2:1436:11015:11229	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19475]""]"	chr11:7070456-chr11:6955690	False			0	Read count too low: 1 < 8	FAIL	1
NBPF21P--NBPF8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NBPF21P^ENSG00000231382.1	chr3:36629524:-	NBPF8^ENSG00000270231.4	chr1:120449193:+	LH00995:25:23T55JLT4:2:1321:9575:26755	.	NO_LDAS	0.0034	GT	1.585	AG	1.5546	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:36629524-chr1:120449193	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
MTHFD2L--SLC4A4	1	0	1.0	0.0	ONLY_REF_SPLICE	MTHFD2L^ENSG00000163738.18	chr4:74175403:+	SLC4A4^ENSG00000080493.18	chr4:71236576:+	LH00995:25:23T55JLT4:8:2456:47089:3676	.	NO_LDAS	0.0034	GT	1.9086	AG	1.6895	"[""INTRACHROMOSOMAL[chr4:2.54Mb]""]"	chr4:74175403-chr4:71236576	False			0	Read count too low: 1 < 8	FAIL	1
MINDY4--THSD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MINDY4^ENSG00000106125.14	chr7:30836721:+	THSD1^ENSG00000136114.17	chr13:52378492:-	LH00995:25:23T55JLT4:8:1219:37761:14816	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr7--chr13]""]"	chr7:30836721-chr13:52378492	False			0	Read count too low: 1 < 8	FAIL	1
LY96--AC087627.1	1	0	1.0	0.0	ONLY_REF_SPLICE	LY96^ENSG00000154589.7	chr8:74010129:+	AC087627.1^ENSG00000253983.3	chr8:74207721:+	LH00995:25:23T55JLT4:6:1290:15942:14858	.	YES_LDAS	0.0034	GT	1.7968	AG	1.7968	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.06Mb]"",""NEIGHBORS[64466]""]"	chr8:74010129-chr8:74207721	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LUCAT1--PIGL	1	0	1.0	0.0	ONLY_REF_SPLICE	LUCAT1^ENSG00000248323.7	chr5:91313638:-	PIGL^ENSG00000108474.17	chr17:16299888:+	LH00995:25:23T55JLT4:5:2206:46005:28002	.	NO_LDAS	0.0034	GT	1.3383	AG	1.9899	"[""INTERCHROMOSOMAL[chr5--chr17]""]"	chr5:91313638-chr17:16299888	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LINC01748--AF279873.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	LINC01748^ENSG00000226476.6	chr1:60567962:-	AF279873.1^ENSG00000188512.6	chr8:33969694:-	LH00995:25:23T55JLT4:2:2289:5830:22201	.	NO_LDAS	0.0011	GT	1.9656	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr8]""]"	chr1:60567962-chr8:33969694	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC01687--AKR1E2	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01687^ENSG00000233215.6	chr21:22062009:-	AKR1E2^ENSG00000165568.18	chr10:4830675:+	LH00995:25:23T55JLT4:6:2257:32049:15853	.	YES_LDAS	0.0034	GT	1.6729	AG	1.9899	"[""INTERCHROMOSOMAL[chr21--chr10]""]"	chr21:22062009-chr10:4830675	False			0	Read count too low: 1 < 8	FAIL	1
LINC01638--ADAP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC01638^ENSG00000233521.7	chr22:27223485:-	ADAP1^ENSG00000105963.15	chr7:904239:-	LH00995:25:23T55JLT4:5:1451:46094:27427	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6402	"[""INTERCHROMOSOMAL[chr22--chr7]""]"	chr22:27223485-chr7:904239	False			0	Read count too low: 1 < 8	FAIL	1
LINC01563--IFTAP	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01563^ENSG00000236819.2	chr17:21075957:+	IFTAP^ENSG00000166352.18	chr11:36648016:+	LH00995:25:23T55JLT4:2:2194:46806:13723	.	YES_LDAS	0.0034	GT	1.7056	AG	1.7465	"[""INTERCHROMOSOMAL[chr17--chr11]""]"	chr17:21075957-chr11:36648016	False			0	Read count too low: 1 < 8	FAIL	1
LINC01018--TBCAP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC01018^ENSG00000250056.8	chr5:6592744:+	TBCAP1^ENSG00000226781.1	chrX:33041554:+	LH00995:25:23T55JLT4:2:2317:12480:16792	.	NO_LDAS	0.0034	GT	1.7232	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chrX]""]"	chr5:6592744-chrX:33041554	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC00705--ARHGAP11B	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC00705^ENSG00000225269.3	chr10:4659348:+	ARHGAP11B^ENSG00000285077.2	chr15:30633490:+	LH00995:25:23T55JLT4:5:2289:27551:26923	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr15]""]"	chr10:4659348-chr15:30633490	False			0	Read count too low: 1 < 8	FAIL	1
LIN52--NHLH2	1	0	1.0	0.0	ONLY_REF_SPLICE	LIN52^ENSG00000205659.11	chr14:74101238:+	NHLH2^ENSG00000177551.5	chr1:115838380:-	LH00995:25:23T55JLT4:6:1454:26920:12490	.	YES_LDAS	0.0034	GT	1.6402	AG	1.9086	"[""INTERCHROMOSOMAL[chr14--chr1]""]"	chr14:74101238-chr1:115838380	False			0	Read count too low: 1 < 8	FAIL	1
LIMS3--VINAC1P	1	0	0.5	0.0	ONLY_REF_SPLICE	LIMS3^ENSG00000256977.12	chr2:109924423:+	VINAC1P^ENSG00000283698.1	chr2:112440611:-	LH00995:25:23T55JLT4:5:2498:48796:18796	.	YES_LDAS	0.0017	GT	1.4566	AG	1.6895	"[""INTRACHROMOSOMAL[chr2:2.51Mb]""]"	chr2:109924423-chr2:112440611	False			0	Read count too low: 1 < 8	FAIL	1
LANCL3--XK	1	0	1.0	0.0	ONLY_REF_SPLICE	LANCL3^ENSG00000147036.12	chrX:37659659:+	XK^ENSG00000047597.7	chrX:37694286:+	LH00995:25:23T55JLT4:2:2288:11646:16806	.	YES_LDAS	0.0034	GT	1.8323	AG	1.6402	"[""INTRACHROMOSOMAL[chrX:0.00Mb]"",""NEIGHBORS[1328]""]"	chrX:37659659-chrX:37694286	False			0	Read count too low: 1 < 8	FAIL	1
KRTAP5-AS1--AP000867.5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KRTAP5-AS1^ENSG00000233930.4	chr11:1598289:+	AP000867.5^ENSG00000286948.1	chr11:71563684:-	LH00995:25:23T55JLT4:2:2123:48707:19931	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:69.96Mb]""]"	chr11:1598289-chr11:71563684	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
KCNH4--RN7SL15P	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KCNH4^ENSG00000089558.9	chr17:42178331:-	RN7SL15P^ENSG00000264573.2	chrX:41345718:-	LH00995:25:23T55JLT4:5:1125:28741:24975	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTERCHROMOSOMAL[chr17--chrX]""]"	chr17:42178331-chrX:41345718	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ITM2A--C3orf35	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ITM2A^ENSG00000078596.11	chrX:79361166:-	C3orf35^ENSG00000198590.12	chr3:37417058:+	LH00995:25:23T55JLT4:5:1121:45972:2443	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chrX--chr3]""]"	chrX:79361166-chr3:37417058	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ITFG1-AS1--ZNF22-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ITFG1-AS1^ENSG00000260281.6	chr16:47162655:+	ZNF22-AS1^ENSG00000165511.6	chr10:44998413:-	LH00995:25:23T55JLT4:6:1264:9406:25199	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9899	"[""INTERCHROMOSOMAL[chr16--chr10]""]"	chr16:47162655-chr10:44998413	False			0	Read count too low: 1 < 8	FAIL	1
ISCA1--C9orf153	1	0	1.0	0.0	ONLY_REF_SPLICE	ISCA1^ENSG00000135070.15	chr9:86272007:-	C9orf153^ENSG00000187753.13	chr9:86229629:-	LH00995:25:23T55JLT4:2:1312:34695:22453	.	NO_LDAS	0.0034	GT	1.7819	AG	1.371	"[""INTRACHROMOSOMAL[chr9:0.00Mb]"",""NEIGHBORS[4889]""]"	chr9:86272007-chr9:86229629	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
IRX4--SRRM1P3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IRX4^ENSG00000113430.10	chr5:1879598:-	SRRM1P3^ENSG00000237307.2	chrX:136985671:-	LH00995:25:23T55JLT4:2:2427:23587:2009	.	NO_LDAS	0.0034	GC	1.8256	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chrX]""]"	chr5:1879598-chrX:136985671	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IL7--PKIA-AS1	1	0	1.0	0.0	ONLY_REF_SPLICE	IL7^ENSG00000104432.14	chr8:78798072:-	PKIA-AS1^ENSG00000254266.6	chr8:78430948:-	LH00995:25:23T55JLT4:6:2137:23385:11523	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chr8:0.12Mb]""]"	chr8:78798072-chr8:78430948	False			0	Read count too low: 1 < 8	FAIL	1
IL7--AC068700.2	1	0	1.0	0.0	ONLY_REF_SPLICE	IL7^ENSG00000104432.14	chr8:78798072:-	AC068700.2^ENSG00000286675.1	chr8:78630426:-	LH00995:25:23T55JLT4:5:1268:24712:13345	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[9761]""]"	chr8:78798072-chr8:78630426	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
HSPA14--TNFSF8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HSPA14^ENSG00000187522.16	chr10:14849454:+	TNFSF8^ENSG00000106952.8	chr9:114904254:-	LH00995:25:23T55JLT4:2:2463:33133:5316	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:14849454-chr9:114904254	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HMGN2P5--AC245047.3	1	0	0.17	0.0	INCL_NON_REF_SPLICE	HMGN2P5^ENSG00000234664.1	chr15:29730865:+	AC245047.3^ENSG00000234780.1	chrX:48198746:+	LH00995:25:23T55JLT4:8:2120:19405:16147	.	YES_LDAS	0.0006	GT	0.9968	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chrX]""]"	chr15:29730865-chrX:48198746	False			0	Read count too low: 1 < 8	FAIL	1
HLA-J--OR10S1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HLA-J^ENSG00000204622.11	chr6:30009181:+	OR10S1^ENSG00000196248.5	chr11:123977426:-	LH00995:25:23T55JLT4:2:1186:7998:1266	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr6--chr11]""]"	chr6:30009181-chr11:123977426	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HLA-F-AS1--LINC02043	1	0	1.0	0.0	ONLY_REF_SPLICE	HLA-F-AS1^ENSG00000214922.9	chr6:29748900:-	LINC02043^ENSG00000232233.1	chr3:186812148:-	LH00995:25:23T55JLT4:5:1372:13766:28548	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9329	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:29748900-chr3:186812148	False			0	Read count too low: 1 < 8	FAIL	1
GTF2IP7--AC008267.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GTF2IP7^ENSG00000227038.3	chr7:76099440:-	AC008267.2^ENSG00000230189.7	chr7:66439304:-	LH00995:25:23T55JLT4:6:2273:1275:19945	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:9.64Mb]""]"	chr7:76099440-chr7:66439304	False			0	Read count too low: 1 < 8	FAIL	1
GTF2H5--ZNF737	1	0	1.0	0.0	ONLY_REF_SPLICE	GTF2H5^ENSG00000272047.3	chr6:158170538:+	ZNF737^ENSG00000237440.9	chr19:20564138:-	LH00995:25:23T55JLT4:6:2252:40479:25606	.	NO_LDAS	0.0034	GT	1.8256	AG	1.6402	"[""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:158170538-chr19:20564138	False			0	Read count too low: 1 < 8	FAIL	1
GSDMA--LINC01735	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GSDMA^ENSG00000167914.12	chr17:39966437:+	LINC01735^ENSG00000261453.2	chr1:208612778:-	LH00995:25:23T55JLT4:5:1273:7699:19468	.	NO_LDAS	0.0034	GT	1.7465	AG	1.7056	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:39966437-chr1:208612778	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GPRIN2--NPY4R	1	0	0.5	0.0	ONLY_REF_SPLICE	GPRIN2^ENSG00000204175.5	chr10:46554585:-	NPY4R^ENSG00000204174.8	chr10:46462694:-	LH00995:25:23T55JLT4:2:1306:8427:20029	.	YES_LDAS	0.0017	GT	1.6402	AG	1.9219	"[""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[83086]""]"	chr10:46554585-chr10:46462694	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
GPR141--NME8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GPR141^ENSG00000187037.8	chr7:37685583:+	NME8^ENSG00000086288.12	chr7:37896917:+	LH00995:25:23T55JLT4:5:2309:42833:11131	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[14809]""]"	chr7:37685583-chr7:37896917	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
GPALPP1--AL049828.1	1	0	1.0	0.0	ONLY_REF_SPLICE	GPALPP1^ENSG00000133114.18	chr13:45028003:+	AL049828.1^ENSG00000258526.7	chr14:39470318:+	LH00995:25:23T55JLT4:8:2450:17115:24232	.	NO_LDAS	0.0034	GT	1.2729	AG	1.8295	"[""INTERCHROMOSOMAL[chr13--chr14]""]"	chr13:45028003-chr14:39470318	False			0	Read count too low: 1 < 8	FAIL	1
GOLGA8IP--AC123768.1	1	0	0.1	0.0	ONLY_REF_SPLICE	GOLGA8IP^ENSG00000277561.5	chr15:22607800:-	AC123768.1^ENSG00000244952.2	chr15:32614109:+	LH00995:25:23T55JLT4:2:1390:2319:13233	.	NO_LDAS	0.0003	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chr15:10.00Mb]""]"	chr15:22607800-chr15:32614109	False			0	Read count too low: 1 < 8	FAIL	1
GINS4--ZNF439	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GINS4^ENSG00000147536.12	chr8:41530298:+	ZNF439^ENSG00000171291.8	chr19:11850886:+	LH00995:25:23T55JLT4:2:2247:5247:14970	.	NO_LDAS	0.0034	GT	1.7056	AG	1.7465	"[""INTERCHROMOSOMAL[chr8--chr19]""]"	chr8:41530298-chr19:11850886	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GET1--ERG	1	0	1.0	0.0	ONLY_REF_SPLICE	GET1^ENSG00000182093.16	chr21:39391836:+	ERG^ENSG00000157554.19	chr21:38445621:-	LH00995:25:23T55JLT4:5:2226:49589:6157	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9656	"[""INTRACHROMOSOMAL[chr21:0.72Mb]""]"	chr21:39391836-chr21:38445621	False			0	Read count too low: 1 < 8	FAIL	1
FTH1P13--FTH1P12	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FTH1P13^ENSG00000258960.1	chr14:65901323:-	FTH1P12^ENSG00000213362.3	chr9:15527650:-	LH00995:25:23T55JLT4:6:1460:6930:1406	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7056	"[""INTERCHROMOSOMAL[chr14--chr9]""]"	chr14:65901323-chr9:15527650	False			0	Read count too low: 1 < 8	FAIL	1
FSD1--BMP8A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FSD1^ENSG00000105255.11	chr19:4323583:+	BMP8A^ENSG00000183682.8	chr1:39526809:+	LH00995:25:23T55JLT4:8:1257:18871:15222	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:4323583-chr1:39526809	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FNDC11--STK26	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FNDC11^ENSG00000125531.7	chr20:63548356:+	STK26^ENSG00000134602.16	chrX:132023553:+	LH00995:25:23T55JLT4:5:2215:32066:11201	.	NO_LDAS	0.0034	GT	1.2419	AG	1.7465	"[""INTERCHROMOSOMAL[chr20--chrX]""]"	chr20:63548356-chrX:132023553	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FGF7P3--ZNF23	1	0	1.0	0.0	ONLY_REF_SPLICE	FGF7P3^ENSG00000204837.5	chr9:39830013:-	ZNF23^ENSG00000167377.18	chr16:71449882:-	LH00995:25:23T55JLT4:5:2332:36208:19468	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr16]""]"	chr9:39830013-chr16:71449882	False			0	Read count too low: 1 < 8	FAIL	1
FAM76A--DEXI	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM76A^ENSG00000009780.16	chr1:27734183:+	DEXI^ENSG00000182108.11	chr16:10929360:-	LH00995:25:23T55JLT4:5:2269:5223:26390	.	YES_LDAS	0.0034	GT	1.3996	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:27734183-chr16:10929360	False			0	Read count too low: 1 < 8	FAIL	1
FAM222A--SOX5	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM222A^ENSG00000139438.6	chr12:109714897:+	SOX5^ENSG00000134532.19	chr12:23665564:-	LH00995:25:23T55JLT4:2:2386:45058:28520	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:85.15Mb]""]"	chr12:109714897-chr12:23665564	False			0	Read count too low: 1 < 8	FAIL	1
ELAC1--CHCHD6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ELAC1^ENSG00000141642.9	chr18:50987662:+	CHCHD6^ENSG00000159685.11	chr3:126957432:+	LH00995:25:23T55JLT4:2:1108:32980:4685	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTERCHROMOSOMAL[chr18--chr3]""]"	chr18:50987662-chr3:126957432	False			0	Read count too low: 1 < 8	FAIL	1
EFCAB5--RPL23P2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EFCAB5^ENSG00000176927.15	chr17:29930014:+	RPL23P2^ENSG00000176054.6	chr21:28997868:-	LH00995:25:23T55JLT4:8:2110:23126:7067	.	YES_LDAS	0.0034	GT	1.8062	AG	1.6895	"[""INTERCHROMOSOMAL[chr17--chr21]""]"	chr17:29930014-chr21:28997868	False			0	Read count too low: 1 < 8	FAIL	1
DMRTA1--LINC01239	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DMRTA1^ENSG00000176399.4	chr9:22467906:+	LINC01239^ENSG00000234840.2	chr9:22674443:+	LH00995:25:23T55JLT4:5:2473:11703:5946	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr9:0.19Mb]""]"	chr9:22467906-chr9:22674443	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DLGAP1--ANKRD30B	1	0	1.0	0.0	ONLY_REF_SPLICE	DLGAP1^ENSG00000170579.17	chr18:4151180:-	ANKRD30B^ENSG00000180777.14	chr18:14791401:+	LH00995:25:23T55JLT4:8:2162:22730:6044	.	NO_LDAS	0.0034	GT	1.6402	AG	1.9656	"[""INTRACHROMOSOMAL[chr18:10.27Mb]""]"	chr18:4151180-chr18:14791401	False			0	Read count too low: 1 < 8	FAIL	1
CYP4B1--CYP4X1	1	0	1.0	0.0	ONLY_REF_SPLICE	CYP4B1^ENSG00000142973.14	chr1:46815264:+	CYP4X1^ENSG00000186377.8	chr1:47029990:+	LH00995:25:23T55JLT4:5:2162:10117:5330	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7465	"[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.20Mb]""]"	chr1:46815264-chr1:47029990	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
CXADR--AC012414.4	1	0	0.33	0.0	ONLY_REF_SPLICE	CXADR^ENSG00000154639.19	chr21:17565611:+	AC012414.4^ENSG00000260409.1	chr15:20731094:-	LH00995:25:23T55JLT4:6:1196:38813:20001	.	YES_LDAS	0.0011	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr21--chr15]""]"	chr21:17565611-chr15:20731094	False			0	Read count too low: 1 < 8	FAIL	1
CNBD1--AC090572.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CNBD1^ENSG00000176571.12	chr8:87428613:+	AC090572.3^ENSG00000254115.1	chr8:86707894:+	LH00995:25:23T55JLT4:8:2433:27495:20211	.	YES_LDAS	0.0034	GT	1.9899	AG	1.231	"[""INTRACHROMOSOMAL[chr8:0.10Mb]""]"	chr8:87428613-chr8:86707894	False			0	Read count too low: 1 < 8	FAIL	1
CHUK--AC011447.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CHUK^ENSG00000213341.11	chr10:100209685:-	AC011447.3^ENSG00000267383.7	chr19:20125403:-	LH00995:25:23T55JLT4:6:2130:12188:17128	.	YES_LDAS	0.0034	AT	1.8323	AC	1.8323	"[""INTERCHROMOSOMAL[chr10--chr19]""]"	chr10:100209685-chr19:20125403	False			0	Read count too low: 1 < 8	FAIL	1
CFAP20DC--GABRQ	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CFAP20DC^ENSG00000163689.20	chr3:59047177:-	GABRQ^ENSG00000268089.3	chrX:152653125:+	LH00995:25:23T55JLT4:5:1156:35609:20841	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6049	"[""INTERCHROMOSOMAL[chr3--chrX]""]"	chr3:59047177-chrX:152653125	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CDIN1--NUP35	1	0	1.0	0.0	ONLY_REF_SPLICE	CDIN1^ENSG00000186073.14	chr15:36579961:+	NUP35^ENSG00000163002.13	chr2:183128287:+	LH00995:25:23T55JLT4:8:2458:17633:14452	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9219	"[""INTERCHROMOSOMAL[chr15--chr2]""]"	chr15:36579961-chr2:183128287	False			0	Read count too low: 1 < 8	FAIL	1
CD300LF--AC064805.2	1	0	1.0	0.0	ONLY_REF_SPLICE	CD300LF^ENSG00000186074.19	chr17:74695725:-	AC064805.2^ENSG00000264659.2	chr17:74672982:-	LH00995:25:23T55JLT4:5:1349:11841:17366	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.02Mb]"",""NEIGHBORS[16687]""]"	chr17:74695725-chr17:74672982	False			0	Read count too low: 1 < 8	FAIL	1
CD300LF--AC064805.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CD300LF^ENSG00000186074.19	chr17:74695725:-	AC064805.2^ENSG00000264659.2	chr17:74677484:-	LH00995:25:23T55JLT4:8:2347:45220:26614	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7968	"[""INTRACHROMOSOMAL[chr17:0.02Mb]"",""NEIGHBORS[16687]""]"	chr17:74695725-chr17:74677484	False			0	Read count too low: 1 < 8	FAIL	1
CD247--TMEM161B	1	0	1.0	0.0	ONLY_REF_SPLICE	CD247^ENSG00000198821.11	chr1:167518408:-	TMEM161B^ENSG00000164180.14	chr5:88190261:-	LH00995:25:23T55JLT4:8:2301:2197:15489	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8295	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:167518408-chr5:88190261	False			0	Read count too low: 1 < 8	FAIL	1
CCT6P1--AC073210.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CCT6P1^ENSG00000228409.6	chr7:65763344:+	AC073210.1^ENSG00000227113.2	chr7:65078624:+	LH00995:25:23T55JLT4:6:1124:47105:12112	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8323	"[""INTRACHROMOSOMAL[chr7:0.67Mb]""]"	chr7:65763344-chr7:65078624	False			0	Read count too low: 1 < 8	FAIL	1
CCDC81--AP003059.1	1	0	1.0	0.0	ONLY_REF_SPLICE	CCDC81^ENSG00000149201.10	chr11:86415313:+	AP003059.1^ENSG00000254731.1	chr11:86703099:+	LH00995:25:23T55JLT4:6:2374:4131:9505	.	YES_LDAS	0.0034	GT	1.3996	AG	1.7465	"[""INTRACHROMOSOMAL[chr11:0.28Mb]""]"	chr11:86415313-chr11:86703099	False			0	Read count too low: 1 < 8	FAIL	1
CCDC24--LRRC24	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CCDC24^ENSG00000159214.13	chr1:43991740:+	LRRC24^ENSG00000254402.7	chr8:144525033:-	LH00995:25:23T55JLT4:6:1284:26297:11663	.	NO_LDAS	0.0017	GC	1.5301	AG	1.7968	"[""INTERCHROMOSOMAL[chr1--chr8]""]"	chr1:43991740-chr8:144525033	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CCDC122--ENOX1	1	0	1.0	0.0	ONLY_REF_SPLICE	CCDC122^ENSG00000151773.13	chr13:43874842:-	ENOX1^ENSG00000120658.13	chr13:43361452:-	LH00995:25:23T55JLT4:2:1131:6380:27862	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9086	"[""INTRACHROMOSOMAL[chr13:0.04Mb]"",""NEIGHBORS[37001]""]"	chr13:43874842-chr13:43361452	False			0	Read count too low: 1 < 8	FAIL	1
CAMKMT--AC093866.1	1	0	1.0	0.0	ONLY_REF_SPLICE	CAMKMT^ENSG00000143919.15	chr2:44390305:+	AC093866.1^ENSG00000251095.7	chr4:89587821:+	LH00995:25:23T55JLT4:5:2113:9325:17184	.	YES_LDAS	0.0034	GT	1.7819	AG	1.4256	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:44390305-chr4:89587821	False			0	Read count too low: 1 < 8	FAIL	1
C9orf85--AL583829.1	1	0	1.0	0.0	ONLY_REF_SPLICE	C9orf85^ENSG00000155621.15	chr9:71911836:+	AL583829.1^ENSG00000286823.1	chr9:72064429:+	LH00995:25:23T55JLT4:6:1101:11428:19931	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTRACHROMOSOMAL[chr9:0.07Mb]"",""NEIGHBORS[74522]""]"	chr9:71911836-chr9:72064429	False			0	Read count too low: 1 < 8	FAIL	1
C9orf43--NAP1L3	1	0	0.25	0.0	INCL_NON_REF_SPLICE	C9orf43^ENSG00000157653.12	chr9:113425356:+	NAP1L3^ENSG00000186310.10	chrX:93673143:-	LH00995:25:23T55JLT4:5:1108:2480:11747	.	NO_LDAS	0.0008	GC	1.7968	AG	1.5058	"[""INTERCHROMOSOMAL[chr9--chrX]""]"	chr9:113425356-chrX:93673143	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
C5--MBLAC2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	C5^ENSG00000106804.8	chr9:121043009:-	MBLAC2^ENSG00000176055.10	chr5:90461389:-	LH00995:25:23T55JLT4:8:2116:11638:26965	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9329	"[""INTERCHROMOSOMAL[chr9--chr5]""]"	chr9:121043009-chr5:90461389	False			0	Read count too low: 1 < 8	FAIL	1
BTF3P10--RPLP0P2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BTF3P10^ENSG00000231120.3	chr6:149978257:+	RPLP0P2^ENSG00000243742.5	chr11:61636541:+	LH00995:25:23T55JLT4:2:1402:34565:14522	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9219	"[""INTERCHROMOSOMAL[chr6--chr11]""]"	chr6:149978257-chr11:61636541	False			0	Read count too low: 1 < 8	FAIL	1
BFSP2--MYLK3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BFSP2^ENSG00000170819.5	chr3:133475159:+	MYLK3^ENSG00000140795.13	chr16:46726402:-	LH00995:25:23T55JLT4:5:1324:26006:16848	.	YES_LDAS	0.0034	GC	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr3--chr16]""]"	chr3:133475159-chr16:46726402	False			0	Read count too low: 1 < 8	FAIL	1
BAG2--PRIM2	1	0	1.0	0.0	ONLY_REF_SPLICE	BAG2^ENSG00000112208.11	chr6:57172810:+	PRIM2^ENSG00000146143.19	chr6:57318437:+	LH00995:25:23T55JLT4:2:2138:51490:24162	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8323	"[""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.12Mb]""]"	chr6:57172810-chr6:57318437	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
ATP8B3--MIR600HG	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ATP8B3^ENSG00000130270.16	chr19:1810667:-	MIR600HG^ENSG00000236901.6	chr9:123114221:-	LH00995:25:23T55JLT4:5:1142:30003:21780	.	NO_LDAS	0.0034	GC	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr19--chr9]""]"	chr19:1810667-chr9:123114221	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AS3MT--TAF1A	1	0	1.0	0.0	ONLY_REF_SPLICE	AS3MT^ENSG00000214435.8	chr10:102874661:+	TAF1A^ENSG00000143498.18	chr1:222570665:-	LH00995:25:23T55JLT4:2:1385:10360:3200	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:102874661-chr1:222570665	False			0	Read count too low: 1 < 8	FAIL	1
AP000692.1--STAG3L4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP000692.1^ENSG00000228107.1	chr21:36360633:+	STAG3L4^ENSG00000106610.15	chr7:67302845:+	LH00995:25:23T55JLT4:8:2136:8653:17030	.	YES_LDAS	0.0034	GT	1.8256	AG	1.3996	"[""INTERCHROMOSOMAL[chr21--chr7]""]"	chr21:36360633-chr7:67302845	False			0	Read count too low: 1 < 8	FAIL	1
AL928711.1--SYT14	1	0	1.0	0.0	ONLY_REF_SPLICE	AL928711.1^ENSG00000259984.1	chr1:25337040:-	SYT14^ENSG00000143469.20	chr1:210155721:+	LH00995:25:23T55JLT4:2:2113:15060:28744	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:184.56Mb]""]"	chr1:25337040-chr1:210155721	False			0	Read count too low: 1 < 8	FAIL	1
AL513550.1--AC011487.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AL513550.1^ENSG00000228506.2	chr6:99425898:+	AC011487.1^ENSG00000213777.5	chr19:53503656:+	LH00995:25:23T55JLT4:6:2417:30868:19272	.	YES_LDAS	0.0017	GT	1.7819	AG	1.7465	"[""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:99425898-chr19:53503656	False			0	Read count too low: 1 < 8	FAIL	1
AL450384.2--NSUN6	1	0	1.0	0.0	ONLY_REF_SPLICE	AL450384.2^ENSG00000240291.1	chr10:18542069:-	NSUN6^ENSG00000241058.4	chr10:18548237:-	LH00995:25:23T55JLT4:8:1320:17552:11902	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[90]""]"	chr10:18542069-chr10:18548237	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AL391650.1--ARMC4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL391650.1^ENSG00000236782.7	chr1:26170443:-	ARMC4^ENSG00000169126.16	chr10:27936865:-	LH00995:25:23T55JLT4:6:2178:8702:24288	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8062	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:26170443-chr10:27936865	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL158819.1--SMC1B	1	0	0.5	0.0	ONLY_REF_SPLICE	AL158819.1^ENSG00000232765.6	chrX:55282845:+	SMC1B^ENSG00000077935.17	chr22:45358795:-	LH00995:25:23T55JLT4:5:1493:24251:27960	.	YES_LDAS	0.0017	GT	1.8323	AG	1.8323	"[""INTERCHROMOSOMAL[chrX--chr22]""]"	chrX:55282845-chr22:45358795	False			0	Read count too low: 1 < 8	FAIL	1
AL121977.2--SLC6A13	1	0	1.0	0.0	ONLY_REF_SPLICE	AL121977.2^ENSG00000286875.1	chr6:82363612:-	SLC6A13^ENSG00000010379.16	chr12:260057:-	LH00995:25:23T55JLT4:8:2298:26945:21500	.	YES_LDAS	0.0034	GT	1.8323	AG	1.7465	"[""INTERCHROMOSOMAL[chr6--chr12]""]"	chr6:82363612-chr12:260057	False			0	Read count too low: 1 < 8	FAIL	1
AL109809.4--SIRPG	1	0	1.0	0.0	ONLY_REF_SPLICE	AL109809.4^ENSG00000286288.1	chr20:1810554:-	SIRPG^ENSG00000089012.14	chr20:1649408:-	LH00995:25:23T55JLT4:5:1175:14276:27077	.	YES_LDAS	0.0034	GT	1.6729	AG	1.6402	"[""INTRACHROMOSOMAL[chr20:0.07Mb]"",""NEIGHBORS[71259]""]"	chr20:1810554-chr20:1649408	False			0	Read count too low: 1 < 8	FAIL	1
AL033504.1--MYLK4	1	0	1.0	0.0	ONLY_REF_SPLICE	AL033504.1^ENSG00000227681.5	chr6:147676155:+	MYLK4^ENSG00000145949.11	chr6:2685576:-	LH00995:25:23T55JLT4:2:2139:19575:3915	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr6:144.91Mb]""]"	chr6:147676155-chr6:2685576	False			0	Read count too low: 1 < 8	FAIL	1
ADAMTSL3--AC006547.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ADAMTSL3^ENSG00000156218.13	chr15:83704508:+	AC006547.1^ENSG00000236540.7	chr22:20058476:-	LH00995:25:23T55JLT4:2:1342:40487:13933	.	YES_LDAS	0.0017	GT	1.9899	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr22]""]"	chr15:83704508-chr22:20058476	False			0	Read count too low: 1 < 8	FAIL	1
ACTR3B--AC006453.1	1	0	0.2	0.0	INCL_NON_REF_SPLICE	ACTR3B^ENSG00000133627.18	chr7:152759926:+	AC006453.1^ENSG00000283132.1	chr2:89640557:-	LH00995:25:23T55JLT4:2:2204:42655:28870	.	YES_LDAS	0.0007	GT	1.7968	AG	1.9219	"[""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:152759926-chr2:89640557	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.2--AL121757.1	1	0	0.08	0.0	ONLY_REF_SPLICE	AC242842.2^ENSG00000284964.1	chr1:149607554:+	AL121757.1^ENSG00000230563.4	chr20:5473634:+	LH00995:25:23T55JLT4:8:2440:34347:27876	.	YES_LDAS	0.0003	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr20]""]"	chr1:149607554-chr20:5473634	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.2--AC245297.1	1	0	0.09	0.0	ONLY_REF_SPLICE	AC242842.2^ENSG00000284964.1	chr1:149607554:+	AC245297.1^ENSG00000215861.6	chr1:149240487:-	LH00995:25:23T55JLT4:8:1356:49904:7712	.	YES_LDAS	0.0003	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:0.29Mb]""]"	chr1:149607554-chr1:149240487	False			0	Read count too low: 1 < 8	FAIL	1
AC233968.1--H1-10-AS1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC233968.1^ENSG00000274615.1	chr17:38124630:+	H1-10-AS1^ENSG00000206417.8	chr3:129323425:+	LH00995:25:23T55JLT4:2:1355:21654:24022	.	NO_LDAS	0.0017	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr17--chr3]""]"	chr17:38124630-chr3:129323425	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC211486.4--FAM157B	1	0	0.33	0.0	ONLY_REF_SPLICE	AC211486.4^ENSG00000275121.1	chr7:75237293:-	FAM157B^ENSG00000233013.10	chr9:138243620:+	LH00995:25:23T55JLT4:6:2438:27325:2878	.	NO_LDAS	0.0011	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr9]""]"	chr7:75237293-chr9:138243620	False			0	Read count too low: 1 < 8	FAIL	1
AC134407.3--PKN2-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC134407.3^ENSG00000279880.1	chr17:67975958:+	PKN2-AS1^ENSG00000237505.8	chr1:88540052:-	LH00995:25:23T55JLT4:2:2404:39428:23308	.	NO_LDAS	0.0034	GT	1.9656	AG	1.231	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:67975958-chr1:88540052	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC134407.3--AL021707.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC134407.3^ENSG00000279880.1	chr17:67975958:+	AL021707.2^ENSG00000228274.4	chr22:38676275:-	LH00995:25:23T55JLT4:6:1112:31338:10164	.	NO_LDAS	0.0017	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr22]""]"	chr17:67975958-chr22:38676275	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC110611.2--NMU	1	0	1.0	0.0	ONLY_REF_SPLICE	AC110611.2^ENSG00000287382.1	chr4:55940517:-	NMU^ENSG00000109255.11	chr4:55630460:-	LH00995:25:23T55JLT4:8:1292:38376:4391	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9329	"[""INTRACHROMOSOMAL[chr4:0.30Mb]""]"	chr4:55940517-chr4:55630460	False			0	Read count too low: 1 < 8	FAIL	1
AC108519.1--RAPSN	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC108519.1^ENSG00000288075.1	chr4:9129304:-	RAPSN^ENSG00000165917.10	chr11:47438072:-	LH00995:25:23T55JLT4:5:1227:40908:24779	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr4--chr11]""]"	chr4:9129304-chr11:47438072	False			0	Read count too low: 1 < 8	FAIL	1
AC106782.3--AC026468.1	1	0	0.1	0.0	ONLY_REF_SPLICE	AC106782.3^ENSG00000261444.1	chr16:30214438:+	AC026468.1^ENSG00000277003.1	chr16:69975238:+	LH00995:25:23T55JLT4:5:1232:46539:16428	.	YES_LDAS	0.0003	GT	1.9899	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:39.76Mb]""]"	chr16:30214438-chr16:69975238	False			0	Read count too low: 1 < 8	FAIL	1
AC105020.6--NIFK-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC105020.6^ENSG00000275454.1	chr15:75640087:+	NIFK-AS1^ENSG00000236859.7	chr2:121651992:+	LH00995:25:23T55JLT4:2:2425:51878:23490	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7465	"[""INTERCHROMOSOMAL[chr15--chr2]""]"	chr15:75640087-chr2:121651992	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC104297.1--GGCT	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC104297.1^ENSG00000213383.2	chr3:17872041:-	GGCT^ENSG00000006625.18	chr7:30504773:-	LH00995:25:23T55JLT4:6:1150:45916:22271	.	YES_LDAS	0.0017	GT	1.9086	AG	1.5656	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:17872041-chr7:30504773	False			0	Read count too low: 1 < 8	FAIL	1
AC096536.2--AC245052.4	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC096536.2^ENSG00000242396.1	chr1:54887120:+	AC245052.4^ENSG00000237017.1	chr19:54124554:-	LH00995:25:23T55JLT4:5:1188:40520:21976	.	YES_LDAS	0.0017	GT	1.8323	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:54887120-chr19:54124554	False			0	Read count too low: 1 < 8	FAIL	1
AC091132.4--AC091132.1	1	0	0.2	0.0	INCL_NON_REF_SPLICE	AC091132.4^ENSG00000267198.1	chr17:45554227:+	AC091132.1^ENSG00000131484.4	chr17:45534200:+	LH00995:25:23T55JLT4:6:1265:5223:14059	.	YES_LDAS	0.0007	GT	1.9899	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11094]""]"	chr17:45554227-chr17:45534200	False			0	Read count too low: 1 < 8	FAIL	1
AC091117.2--C1orf112	1	0	1.0	0.0	ONLY_REF_SPLICE	AC091117.2^ENSG00000259418.1	chr15:45042367:-	C1orf112^ENSG00000000460.17	chr1:169827051:+	LH00995:25:23T55JLT4:2:1334:5611:7838	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:45042367-chr1:169827051	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC091057.4--AP000640.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	AP000640.2^ENSG00000255355.1	chr11:59675397:+	LH00995:25:23T55JLT4:5:2170:44540:5316	.	NO_LDAS	0.0017	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr11]""]"	chr15:30750556-chr11:59675397	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC091057.4--AC091057.6	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	AC091057.6^ENSG00000285035.1	chr15:30647668:+	LH00995:25:23T55JLT4:5:1333:42202:20575	.	YES_LDAS	0.0017	GT	1.8892	AG	1.7465	"[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26911]""]"	chr15:30750556-chr15:30647668	False			0	Read count too low: 1 < 8	FAIL	1
AC091042.1--AC018695.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC091042.1^ENSG00000265936.1	chr18:67375292:+	AC018695.1^ENSG00000214259.3	chr16:85815884:-	LH00995:25:23T55JLT4:6:1264:23102:11537	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr18--chr16]""]"	chr18:67375292-chr16:85815884	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AC090945.1--IMPDH1P8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC090945.1^ENSG00000287042.1	chr3:15860177:+	IMPDH1P8^ENSG00000224728.1	chr3:15878165:+	LH00995:25:23T55JLT4:6:2379:15117:20323	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""NEIGHBORS[2068]""]"	chr3:15860177-chr3:15878165	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC089983.2--HHAT	1	0	1.0	0.0	ONLY_REF_SPLICE	AC089983.2^ENSG00000286258.1	chr12:104177658:-	HHAT^ENSG00000054392.13	chr1:210674288:+	LH00995:25:23T55JLT4:5:2355:15408:13093	.	YES_LDAS	0.0034	GT	1.8323	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:104177658-chr1:210674288	False			0	Read count too low: 1 < 8	FAIL	1
AC079807.1--PRRT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC079807.1^ENSG00000233230.1	chr2:47905741:+	PRRT2^ENSG00000167371.21	chr16:29814162:+	LH00995:25:23T55JLT4:6:1390:8888:21696	.	YES_LDAS	0.0034	GT	1.5546	AG	1.8062	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:47905741-chr16:29814162	False			0	Read count too low: 1 < 8	FAIL	1
AC079768.1--TDRKH	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC079768.1^ENSG00000248625.1	chr4:169833378:+	TDRKH^ENSG00000182134.16	chr1:151776599:-	LH00995:25:23T55JLT4:6:2128:32454:27848	.	YES_LDAS	0.0017	GT	1.7819	AG	1.7968	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:169833378-chr1:151776599	False			0	Read count too low: 1 < 8	FAIL	1
AC067942.1--RPS6P23	1	0	0.14	0.0	INCL_NON_REF_SPLICE	AC067942.1^ENSG00000227304.3	chr4:82495747:-	RPS6P23^ENSG00000230871.1	chr13:99173827:+	LH00995:25:23T55JLT4:2:2461:28724:1182	.	NO_LDAS	0.0005	GT	1.5058	AG	1.7819	"[""INTERCHROMOSOMAL[chr4--chr13]""]"	chr4:82495747-chr13:99173827	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC067942.1--RPS6P20	1	0	0.14	0.0	INCL_NON_REF_SPLICE	AC067942.1^ENSG00000227304.3	chr4:82495747:-	RPS6P20^ENSG00000226356.2	chr12:131292927:-	LH00995:25:23T55JLT4:2:2461:28724:1182	.	NO_LDAS	0.0005	GT	1.5058	AG	1.7819	"[""INTERCHROMOSOMAL[chr4--chr12]""]"	chr4:82495747-chr12:131292927	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC048380.1--JPH1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC048380.1^ENSG00000267762.1	chr18:48688396:-	JPH1^ENSG00000104369.5	chr8:74320993:-	LH00995:25:23T55JLT4:2:2110:51207:4867	.	YES_LDAS	0.0034	GC	1.7465	AG	1.7232	"[""INTERCHROMOSOMAL[chr18--chr8]""]"	chr18:48688396-chr8:74320993	False			0	Read count too low: 1 < 8	FAIL	1
AC026412.1--AHRR	1	0	0.5	0.0	ONLY_REF_SPLICE	AC026412.1^ENSG00000188002.10	chr5:1632845:-	AHRR^ENSG00000063438.19	chr5:343893:+	LH00995:25:23T55JLT4:5:2349:15133:4937	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr5:1.16Mb]""]"	chr5:1632845-chr5:343893	False			0	Read count too low: 1 < 8	FAIL	1
AC026150.2--GOLGA2P9	1	0	0.08	0.0	INCL_NON_REF_SPLICE	AC026150.2^ENSG00000260784.1	chr15:30517819:+	GOLGA2P9^ENSG00000269332.5	chr19:22601360:+	LH00995:25:23T55JLT4:2:1133:39306:21724	.	NO_LDAS	0.0003	GT	1.7056	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr19]""]"	chr15:30517819-chr19:22601360	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC016821.1--TSPAN15	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016821.1^ENSG00000287306.1	chr10:69511870:+	TSPAN15^ENSG00000099282.10	chr10:69495594:+	LH00995:25:23T55JLT4:6:2417:29477:1841	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9086	"[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2500]""]"	chr10:69511870-chr10:69495594	False			0	Read count too low: 1 < 8	FAIL	1
AC016629.1--RPL23AP82	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC016629.1^ENSG00000269032.1	chr19:58589114:+	RPL23AP82^ENSG00000184319.16	chr22:50788895:+	LH00995:25:23T55JLT4:5:1412:41482:26979	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr22]""]"	chr19:58589114-chr22:50788895	False			0	Read count too low: 1 < 8	FAIL	1
AC009315.1--FSIP2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC009315.1^ENSG00000286797.1	chr2:185434191:+	FSIP2^ENSG00000188738.15	chr2:185739346:+	LH00995:25:23T55JLT4:8:1334:41652:28170	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.23Mb]""]"	chr2:185434191-chr2:185739346	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC009093.8--ULK4	1	0	1.0	0.0	ONLY_REF_SPLICE	AC009093.8^ENSG00000284649.1	chr16:29116326:+	ULK4^ENSG00000168038.11	chr3:41819506:-	LH00995:25:23T55JLT4:2:2381:45171:1645	.	YES_LDAS	0.0034	GT	1.8892	AG	0.7219	"[""INTERCHROMOSOMAL[chr16--chr3]""]"	chr16:29116326-chr3:41819506	False			0	Read count too low: 1 < 8	FAIL	1
AC008937.1--SPOCK3	1	0	1.0	0.0	ONLY_REF_SPLICE	AC008937.1^ENSG00000225230.1	chr5:56910176:-	SPOCK3^ENSG00000196104.11	chr4:166754729:-	LH00995:25:23T55JLT4:2:2211:8087:21458	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9656	"[""INTERCHROMOSOMAL[chr5--chr4]""]"	chr5:56910176-chr4:166754729	False			0	Read count too low: 1 < 8	FAIL	1
AC008802.1--AL353691.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC008802.1^ENSG00000254170.1	chr5:78708776:-	AL353691.1^ENSG00000237875.1	chrX:41790238:-	LH00995:25:23T55JLT4:2:2472:47501:16918	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9329	"[""INTERCHROMOSOMAL[chr5--chrX]""]"	chr5:78708776-chrX:41790238	False			0	Read count too low: 1 < 8	FAIL	1
AC008740.2--CRYM-AS1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC008740.2^ENSG00000276548.1	chr16:21401194:+	CRYM-AS1^ENSG00000189149.12	chr16:21315884:+	LH00995:25:23T55JLT4:6:2359:27746:7165	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[62052]""]"	chr16:21401194-chr16:21315884	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC008740.1--FOXL1	1	0	0.5	0.0	ONLY_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	FOXL1^ENSG00000176678.6	chr16:86578562:+	LH00995:25:23T55JLT4:6:1147:2756:11607	.	YES_LDAS	0.0017	GT	1.7232	AG	1.7819	"[""INTRACHROMOSOMAL[chr16:65.22Mb]""]"	chr16:21352138-chr16:86578562	False			0	Read count too low: 1 < 8	FAIL	1
AC008740.1--AC138512.1	1	0	0.5	0.0	ONLY_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	AC138512.1^ENSG00000261273.1	chr16:88276474:+	LH00995:25:23T55JLT4:2:1387:31677:12014	.	YES_LDAS	0.0017	GT	1.7232	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:66.88Mb]""]"	chr16:21352138-chr16:88276474	False			0	Read count too low: 1 < 8	FAIL	1
AC008679.1--ISOC1	1	0	1.0	0.0	ONLY_REF_SPLICE	AC008679.1^ENSG00000286274.1	chr5:129153668:+	ISOC1^ENSG00000066583.12	chr5:129104956:+	LH00995:25:23T55JLT4:5:1245:18944:29193	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9219	"[""INTRACHROMOSOMAL[chr5:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[36649]""]"	chr5:129153668-chr5:129104956	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC008667.2--PSD2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC008667.2^ENSG00000250692.1	chr5:139855786:+	PSD2^ENSG00000146005.4	chr5:139833702:+	LH00995:25:23T55JLT4:6:2307:42728:9688	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7232	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3824]""]"	chr5:139855786-chr5:139833702	False			0	Read count too low: 1 < 8	FAIL	1
AC007405.3--CERNA1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC007405.3^ENSG00000239467.6	chr2:170771427:+	CERNA1^ENSG00000259577.2	chr15:52205277:+	LH00995:25:23T55JLT4:2:2472:49305:4573	.	NO_LDAS	0.0034	GT	1.7968	AG	1.4256	"[""INTERCHROMOSOMAL[chr2--chr15]""]"	chr2:170771427-chr15:52205277	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC007283.1--IGFBP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC007283.1^ENSG00000234431.2	chr2:201167500:+	IGFBP2^ENSG00000115457.10	chr2:216660578:+	LH00995:25:23T55JLT4:6:1367:24421:24667	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7232	"[""INTRACHROMOSOMAL[chr2:15.47Mb]""]"	chr2:201167500-chr2:216660578	False			0	Read count too low: 1 < 8	FAIL	1
AC006001.2--SERGEF	1	0	1.0	0.0	ONLY_REF_SPLICE	AC006001.2^ENSG00000226824.7	chr7:66654626:+	SERGEF^ENSG00000129158.11	chr11:18008076:-	LH00995:25:23T55JLT4:6:1409:25739:11453	.	YES_LDAS	0.0034	GT	1.4566	AG	1.9329	"[""INTERCHROMOSOMAL[chr7--chr11]""]"	chr7:66654626-chr11:18008076	False			0	Read count too low: 1 < 8	FAIL	1
AC005944.1--PPP2R5CP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC005944.1^ENSG00000267469.1	chr19:3053322:+	PPP2R5CP^ENSG00000239557.1	chr3:52374583:+	LH00995:25:23T55JLT4:2:1245:1008:7235	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr19--chr3]""]"	chr19:3053322-chr3:52374583	False			0	Read count too low: 1 < 8	FAIL	1
AC005041.5--VWA5B2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC005041.5^ENSG00000286883.1	chr2:74472467:+	VWA5B2^ENSG00000145198.14	chr3:184241280:+	LH00995:25:23T55JLT4:8:1102:24048:10823	.	NO_LDAS	0.0034	GT	1.9329	AG	1.5546	"[""INTERCHROMOSOMAL[chr2--chr3]""]"	chr2:74472467-chr3:184241280	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC004980.3--AC004980.4	1	0	0.25	0.0	INCL_NON_REF_SPLICE	AC004980.3^ENSG00000230305.2	chr7:76527852:+	AC004980.4^ENSG00000250778.1	chr7:76521938:+	LH00995:25:23T55JLT4:8:2442:51433:6269	.	YES_LDAS	0.0008	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2441]""]"	chr7:76527852-chr7:76521938	False			0	Read count too low: 1 < 8	FAIL	1
AC004784.1--CD177	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC004784.1^ENSG00000282943.1	chr19:43137698:+	CD177^ENSG00000204936.10	chr19:43353853:+	LH00995:25:23T55JLT4:8:1113:44039:10584	.	NO_LDAS	0.0034	GT	1.9086	AG	1.7968	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:0.18Mb]""]"	chr19:43137698-chr19:43353853	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LDHA--COL12A1	1	1	1.0	1.0	INCL_NON_REF_SPLICE	LDHA^ENSG00000134333.14	chr11:18400919:+	COL12A1^ENSG00000111799.22	chr6:75175283:-	LH00995:25:23T55JLT4:6:2118:4050:9029	LH00995:25:23T55JLT4:6:1355:39419:26320	YES_LDAS	0.0068	GT	1.9219	AG	1.9086	"[""INTERCHROMOSOMAL[chr11--chr6]""]"	chr11:18400919-chr6:75175283	False			0	Read count too low: 2 < 8	FAIL	2
CCDC32--CBX3	1	1	1.0	0.07	INCL_NON_REF_SPLICE	CCDC32^ENSG00000128891.16	chr15:40562772:-	CBX3^ENSG00000122565.19	chr7:26201763:+	LH00995:25:23T55JLT4:6:1282:29703:22327	LH00995:25:23T55JLT4:6:1138:21265:19650	YES_LDAS	0.0036	GT	1.8892	AG	1.7232	"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr15--chr7]""]"	chr15:40562772-chr7:26201763	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2