File Info
- Filename
- 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.fusions.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__2cae617--20260515-145204/fusionreport/1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1/1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.fusions.csv
- Size
- 7.4 KB
- Workflow Run
- dev_rna_exp0016-2cae617
- Published
- May 16, 2026 9:48 AM
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| MTAP--CDKN2B-AS1 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr9:21838010:+#chr9:22112320:+,junction_reads: 77,spanning_reads: 2,ffmp: 0.2675 | |
| TMEM65--ANXA13 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr8:124371854#chr8:123684722,reading-frame: in-frame,type: deletion,split_reads1: 31,split_reads2: 14,discordant_mates: 1,coverage1: 1433,coverage2: 116,confidence: high | position: chr8:124371854:-#chr8:123684722:-,junction_reads: 45,spanning_reads: 1,ffmp: 0.1544 | |
| RPSAP52--HMGA2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr12:65826843:-#chr12:65828001:+,junction_reads: 44,spanning_reads: 0,ffmp: 0.149 | |
| B4GALT6--DSC3 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr18:31684312#chr18:30994372,reading-frame: out-of-frame,type: deletion,split_reads1: 34,split_reads2: 9,discordant_mates: 0,coverage1: 1750,coverage2: 1116,confidence: high | position: chr18:31684312:-#chr18:30994372:-,junction_reads: 44,spanning_reads: 0,ffmp: 0.149 | |
| BIRC3--PDGFD | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr11:102317571#chr11:104000255,reading-frame: .,type: inversion,split_reads1: 1,split_reads2: 41,discordant_mates: 0,coverage1: 113,coverage2: 4032,confidence: high | position: chr11:102317571:+#chr11:104000255:-,junction_reads: 43,spanning_reads: 0,ffmp: 0.1456 | |
| TMEM123--PDGFD | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102448812:-#chr11:104000255:-,junction_reads: 42,spanning_reads: 0,ffmp: 0.1422 | ||
| CLTC--VMP1 | Mitelman,FusionGDB2 | 0.312 | 0.5 * (0.125) + 0.5 * (0.500 + 0.000) | position: chr17:59690711:+#chr17:59838295:+,junction_reads: 38,spanning_reads: 3,ffmp: 0.1389 | |
| TBC1D13--AL442224.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr9:128792574#chr9:93825711,reading-frame: out-of-frame,type: duplication,split_reads1: 25,split_reads2: 6,discordant_mates: 0,coverage1: 851,coverage2: 8,confidence: high | position: chr9:128792574:+#chr9:93825711:+,junction_reads: 32,spanning_reads: 0,ffmp: 0.1084 | |
| PDCD1LG2--DYNC2H1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050:+#chr11:103114103:+,junction_reads: 31,spanning_reads: 2,ffmp: 0.1098 | ||
| SH3BP5--AC002074.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr3:15304103#chr7:94279390,reading-frame: out-of-frame,type: translocation,split_reads1: 20,split_reads2: 3,discordant_mates: 0,coverage1: 1337,coverage2: 3,confidence: high | position: chr3:15304103:-#chr7:94279390:-,junction_reads: 27,spanning_reads: 0,ffmp: 0.0914 | |
| AL033504.1--SASH1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr6:147947519#chr6:148390134,reading-frame: .,type: deletion,split_reads1: 5,split_reads2: 19,discordant_mates: 0,coverage1: 9,coverage2: 717,confidence: high | position: chr6:147947519:+#chr6:148390134:+,junction_reads: 24,spanning_reads: 0,ffmp: 0.0813 | |
| TMEM123--PPP2R2C | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102448812:-#chr4:6381094:-,junction_reads: 23,spanning_reads: 0,ffmp: 0.0779 | ||
| TMEM123--DYNC2H1 | Mitelman | 0.312 | 0.5 * (0.125) + 0.5 * (0.500) | position: chr11:102448812:-#chr11:103280348:+,junction_reads: 20,spanning_reads: 1,ffmp: 0.07 | |
| SRGAP2--FCGR1B | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:206343008:+#chr1:121092996:+,junction_reads: 18,spanning_reads: 1,ffmp: 0.0211 | ||
| PTPRM--TTC39C | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr18:7567891:+#chr18:24064140:+,junction_reads: 17,spanning_reads: 0,ffmp: 0.0576 | ||
| TPTE--BAGE2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr21:10527412:+#chr21:10514122:+,junction_reads: 12,spanning_reads: 0,ffmp: 0.0203 | ||
| TMEFF2--TEX41 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr2:191998262:-#chr2:144667969:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.0339 | ||
| SNU13--LLPH | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr22:41680244:-#chr12:66129113:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0339 | ||
| MAP3K20--RAPGEF4 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr2:173091190#chr2:172917802,reading-frame: in-frame,type: duplication,split_reads1: 1,split_reads2: 9,discordant_mates: 0,coverage1: 927,coverage2: 137,confidence: high | position: chr2:173091190:+#chr2:172917802:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.0339 | |
| FLG-AS1--ARHGAP32 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr1:152251758#chr11:128998468,reading-frame: .,type: translocation,split_reads1: 2,split_reads2: 7,discordant_mates: 0,coverage1: 2,coverage2: 546,confidence: high | position: chr1:152251758:+#chr11:128998468:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0339 | |
| NUP214--AP000851.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:131130836#chr11:102657665,reading-frame: out-of-frame,type: translocation,split_reads1: 200,split_reads2: 148,discordant_mates: 2,coverage1: 1284,coverage2: 227,confidence: high | ||
| NUP214--AP000851.2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:131130836#chr11:102657665,reading-frame: out-of-frame,type: translocation,split_reads1: 200,split_reads2: 148,discordant_mates: 2,coverage1: 1284,coverage2: 227,confidence: high | ||
| RCC2--CPS1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:17438230#chr2:211097910,reading-frame: out-of-frame,type: translocation,split_reads1: 63,split_reads2: 9,discordant_mates: 0,coverage1: 2601,coverage2: 27,confidence: high | ||
| RCC2--AC012491.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:17438230#chr2:211097910,reading-frame: out-of-frame,type: translocation,split_reads1: 63,split_reads2: 9,discordant_mates: 0,coverage1: 2601,coverage2: 27,confidence: high | ||
| PDCD1LG2--AP001830.2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050#chr11:102508782,reading-frame: out-of-frame,type: translocation,split_reads1: 26,split_reads2: 1,discordant_mates: 0,coverage1: 1071,coverage2: 1,confidence: high | ||
| PDCD1LG2--MMP7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050#chr11:102508782,reading-frame: out-of-frame,type: translocation,split_reads1: 26,split_reads2: 1,discordant_mates: 0,coverage1: 1071,coverage2: 1,confidence: high | ||
| AC244669.1--SEC22B3P | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:120340756#chr1:148779001,reading-frame: .,type: duplication,split_reads1: 3,split_reads2: 11,discordant_mates: 0,coverage1: 610,coverage2: 488,confidence: high | ||
| PDGFD--MMP20 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:104001244#chr11:102579142,reading-frame: .,type: inversion/3'-3',split_reads1: 2,split_reads2: 10,discordant_mates: 0,coverage1: 3,coverage2: 91,confidence: high | ||
| AC093815.1--UGT8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr4:114490929#chr4:114622879,reading-frame: .,type: deletion/read-through,split_reads1: 2,split_reads2: 8,discordant_mates: 0,coverage1: 12,coverage2: 154,confidence: high | ||
| UGT8--UGT8 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr4:114490929#chr4:114622879,reading-frame: .,type: deletion/read-through,split_reads1: 2,split_reads2: 8,discordant_mates: 0,coverage1: 12,coverage2: 154,confidence: high | |
| AP001347.1--ANKRD20A11P | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr21:14027597#chr21:13970110,reading-frame: .,type: inversion,split_reads1: 7,split_reads2: 2,discordant_mates: 0,coverage1: 233,coverage2: 11,confidence: high | ||
| PMS2P8--CCDC146 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr7:73041421#chr7:77236947,reading-frame: .,type: deletion,split_reads1: 4,split_reads2: 4,discordant_mates: 0,coverage1: 665,coverage2: 148,confidence: high | ||
| AC211476.5--CCDC146 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr7:73041421#chr7:77236947,reading-frame: .,type: deletion,split_reads1: 4,split_reads2: 4,discordant_mates: 0,coverage1: 665,coverage2: 148,confidence: high |
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