#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	SpliceType	LeftGene	LeftBreakpoint	RightGene	RightBreakpoint	JunctionReads	SpanningFrags	LargeAnchorSupport	FFPM	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	annots	breakpoint_ID	blacklisted	blacklist_reasons	aih_curated_reason	CALL	filter_reason	FILTER	total_reads
HLA-C--MUC16	167	0	166.92	0.0	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269489:-	MUC16^ENSG00000181143.15	chr19:8848985:-	LH00995:25:23T55JLT4:2:1102:37761:7530,LH00995:25:23T55JLT4:2:1106:50236:5064,LH00995:25:23T55JLT4:2:1113:28797:25185,LH00995:25:23T55JLT4:2:1129:21039:10066,LH00995:25:23T55JLT4:2:1130:24210:18417,LH00995:25:23T55JLT4:2:1132:9430:29277,LH00995:25:23T55JLT4:2:1133:37826:18992,LH00995:25:23T55JLT4:2:1142:3896:15909,LH00995:25:23T55JLT4:2:1148:50907:29095,LH00995:25:23T55JLT4:2:1154:47453:4951,LH00995:25:23T55JLT4:5:1102:13806:22145,LH00995:25:23T55JLT4:5:1107:21007:18333,LH00995:25:23T55JLT4:5:1109:25399:11986,LH00995:25:23T55JLT4:5:1109:7537:20645,LH00995:25:23T55JLT4:5:1114:16331:24218,LH00995:25:23T55JLT4:5:1117:30302:8062,LH00995:25:23T55JLT4:5:1120:44290:12112,LH00995:25:23T55JLT4:5:1123:50956:17605,LH00995:25:23T55JLT4:5:1126:12294:6745,LH00995:25:23T55JLT4:5:1135:47930:12784,LH00995:25:23T55JLT4:5:1147:33821:1098,LH00995:25:23T55JLT4:5:1155:49467:19174,LH00995:25:23T55JLT4:5:1160:20545:9604,LH00995:25:23T55JLT4:5:1160:24032:21444,LH00995:25:23T55JLT4:5:1170:13281:12238,LH00995:25:23T55JLT4:5:1172:25141:8875,LH00995:25:23T55JLT4:5:1180:1307:14256,LH00995:25:23T55JLT4:5:1191:48958:2149,LH00995:25:23T55JLT4:5:1194:23417:13569,LH00995:25:23T55JLT4:5:1214:18256:20295,LH00995:25:23T55JLT4:5:1220:35755:25353,LH00995:25:23T55JLT4:5:1220:40002:5498,LH00995:25:23T55JLT4:5:1233:14899:21990,LH00995:25:23T55JLT4:5:1237:47509:17829,LH00995:25:23T55JLT4:5:1248:34533:9646,LH00995:25:23T55JLT4:5:1248:48860:3130,LH00995:25:23T55JLT4:5:1251:41175:27315,LH00995:25:23T55JLT4:5:1253:30019:12448,LH00995:25:23T55JLT4:5:1263:40884:18487,LH00995:25:23T55JLT4:5:1270:16007:23574,LH00995:25:23T55JLT4:5:1275:37259:16161,LH00995:25:23T55JLT4:5:1276:8087:8062,LH00995:25:23T55JLT4:5:1282:27657:9562,LH00995:25:23T55JLT4:5:1288:10983:7053,LH00995:25:23T55JLT4:5:1293:26945:20659,LH00995:25:23T55JLT4:5:1296:34622:29305,LH00995:25:23T55JLT4:5:1319:1469:15321,LH00995:25:23T55JLT4:5:1319:18855:12812,LH00995:25:23T55JLT4:5:1322:30003:25283,LH00995:25:23T55JLT4:5:1324:39355:4741,LH00995:25:23T55JLT4:5:1339:10101:23462,LH00995:25:23T55JLT4:5:1339:45705:12602,LH00995:25:23T55JLT4:5:1350:16088:10935,LH00995:25:23T55JLT4:5:1352:30957:14242,LH00995:25:23T55JLT4:5:1358:13572:18824,LH00995:25:23T55JLT4:5:1359:10748:20855,LH00995:25:23T55JLT4:5:1378:40876:5162,LH00995:25:23T55JLT4:5:1391:15950:19440,LH00995:25:23T55JLT4:5:1411:34452:23294,LH00995:25:23T55JLT4:5:1423:3249:19412,LH00995:25:23T55JLT4:5:1427:43667:12434,LH00995:25:23T55JLT4:5:1428:44435:13485,LH00995:25:23T55JLT4:5:1438:6234:17661,LH00995:25:23T55JLT4:5:1451:49289:17408,LH00995:25:23T55JLT4:5:1457:23563:16680,LH00995:25:23T55JLT4:5:1463:10918:5204,LH00995:25:23T55JLT4:5:1483:5085:7796,LH00995:25:23T55JLT4:5:2118:28652:14256,LH00995:25:23T55JLT4:5:2119:3751:19272,LH00995:25:23T55JLT4:5:2124:4851:23167,LH00995:25:23T55JLT4:5:2128:24040:10753,LH00995:25:23T55JLT4:5:2145:10643:19776,LH00995:25:23T55JLT4:5:2174:12819:4153,LH00995:25:23T55JLT4:5:2175:13329:4559,LH00995:25:23T55JLT4:5:2193:26807:28969,LH00995:25:23T55JLT4:5:2196:50438:16315,LH00995:25:23T55JLT4:5:2197:16209:2709,LH00995:25:23T55JLT4:5:2211:25521:25367,LH00995:25:23T55JLT4:5:2224:45592:9295,LH00995:25:23T55JLT4:5:2234:37211:18207,LH00995:25:23T55JLT4:5:2251:14793:9281,LH00995:25:23T55JLT4:5:2252:17657:9197,LH00995:25:23T55JLT4:5:2283:12059:11635,LH00995:25:23T55JLT4:5:2298:39217:22271,LH00995:25:23T55JLT4:5:2330:41927:9141,LH00995:25:23T55JLT4:5:2349:24752:4475,LH00995:25:23T55JLT4:5:2376:28247:29333,LH00995:25:23T55JLT4:5:2387:4980:14200,LH00995:25:23T55JLT4:5:2388:12900:11131,LH00995:25:23T55JLT4:5:2404:25035:12784,LH00995:25:23T55JLT4:5:2409:25464:7698,LH00995:25:23T55JLT4:5:2448:48634:12938,LH00995:25:23T55JLT4:5:2471:46806:18740,LH00995:25:23T55JLT4:5:2479:35035:3312,LH00995:25:23T55JLT4:5:2481:3476:15853,LH00995:25:23T55JLT4:5:2492:24979:24260,LH00995:25:23T55JLT4:6:1104:9122:4055,LH00995:25:23T55JLT4:6:1118:13653:12574,LH00995:25:23T55JLT4:6:1152:41596:7670,LH00995:25:23T55JLT4:6:1186:41539:26741,LH00995:25:23T55JLT4:6:1188:9883:22243,LH00995:25:23T55JLT4:6:1193:37769:15755,LH00995:25:23T55JLT4:6:1194:35205:3606,LH00995:25:23T55JLT4:6:1211:31515:26502,LH00995:25:23T55JLT4:6:1227:24542:25858,LH00995:25:23T55JLT4:6:1229:14866:28408,LH00995:25:23T55JLT4:6:1230:43189:25507,LH00995:25:23T55JLT4:6:1232:8653:19468,LH00995:25:23T55JLT4:6:1237:51546:29249,LH00995:25:23T55JLT4:6:1259:19372:24667,LH00995:25:23T55JLT4:6:1283:45722:9323,LH00995:25:23T55JLT4:6:1313:31071:27553,LH00995:25:23T55JLT4:6:1316:16225:22691,LH00995:25:23T55JLT4:6:1323:3831:9211,LH00995:25:23T55JLT4:6:1323:44201:13583,LH00995:25:23T55JLT4:6:1424:41499:21262,LH00995:25:23T55JLT4:6:1426:44678:21080,LH00995:25:23T55JLT4:6:1435:28635:26867,LH00995:25:23T55JLT4:6:1441:14777:21920,LH00995:25:23T55JLT4:6:1467:31257:12322,LH00995:25:23T55JLT4:6:1469:25262:24751,LH00995:25:23T55JLT4:6:1474:21071:4321,LH00995:25:23T55JLT4:6:2105:31354:1224,LH00995:25:23T55JLT4:6:2108:22163:24513,LH00995:25:23T55JLT4:6:2148:35925:4825,LH00995:25:23T55JLT4:6:2160:49669:27315,LH00995:25:23T55JLT4:6:2171:51951:8286,LH00995:25:23T55JLT4:6:2188:9794:15475,LH00995:25:23T55JLT4:6:2210:5296:10206,LH00995:25:23T55JLT4:6:2242:6420:14116,LH00995:25:23T55JLT4:6:2243:29930:11846,LH00995:25:23T55JLT4:6:2256:1202:8216,LH00995:25:23T55JLT4:6:2260:32147:13639,LH00995:25:23T55JLT4:6:2329:18741:2303,LH00995:25:23T55JLT4:6:2380:28522:26278,LH00995:25:23T55JLT4:6:2411:21581:16189,LH00995:25:23T55JLT4:6:2424:41992:12196,LH00995:25:23T55JLT4:6:2428:40892:18529,LH00995:25:23T55JLT4:6:2447:19283:19440,LH00995:25:23T55JLT4:6:2453:26370:18459,LH00995:25:23T55JLT4:6:2462:13394:10024,LH00995:25:23T55JLT4:6:2496:9681:8272,LH00995:25:23T55JLT4:8:1183:5021:18193,LH00995:25:23T55JLT4:8:1222:44451:20855,LH00995:25:23T55JLT4:8:1229:3265:10612,LH00995:25:23T55JLT4:8:1231:12561:25087,LH00995:25:23T55JLT4:8:1277:1849:3088,LH00995:25:23T55JLT4:8:1305:12310:21598,LH00995:25:23T55JLT4:8:1353:32211:27539,LH00995:25:23T55JLT4:8:1425:18571:17927,LH00995:25:23T55JLT4:8:1428:22544:11747,LH00995:25:23T55JLT4:8:1480:32308:16498,LH00995:25:23T55JLT4:8:1483:48796:20982,LH00995:25:23T55JLT4:8:2118:33182:13975,LH00995:25:23T55JLT4:8:2130:43934:20799,LH00995:25:23T55JLT4:8:2196:33368:29011,LH00995:25:23T55JLT4:8:2213:49694:4909,LH00995:25:23T55JLT4:8:2232:6914:21248,LH00995:25:23T55JLT4:8:2263:10514:14144,LH00995:25:23T55JLT4:8:2263:29800:13639,LH00995:25:23T55JLT4:8:2279:31637:26769,LH00995:25:23T55JLT4:8:2304:41790:3634,LH00995:25:23T55JLT4:8:2332:19979:17170,LH00995:25:23T55JLT4:8:2379:9276:5330,LH00995:25:23T55JLT4:8:2382:47194:25606,LH00995:25:23T55JLT4:8:2441:16784:10010,LH00995:25:23T55JLT4:8:2492:25755:13135	.	NO_LDAS	0.5665	GT	1.9656	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:31269489-chr19:8848985	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	167
HLA-C--NUMA1	124	0	123.95	0.0	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269493:-	NUMA1^ENSG00000137497.18	chr11:72013673:-	LH00995:25:23T55JLT4:2:1117:30820:24373,LH00995:25:23T55JLT4:2:1119:23037:26054,LH00995:25:23T55JLT4:2:1125:33409:8959,LH00995:25:23T55JLT4:2:1136:5174:12714,LH00995:25:23T55JLT4:2:1136:5417:29697,LH00995:25:23T55JLT4:2:1144:5352:14676,LH00995:25:23T55JLT4:2:1156:19955:13653,LH00995:25:23T55JLT4:2:1156:47267:7964,LH00995:25:23T55JLT4:2:1159:10692:21010,LH00995:25:23T55JLT4:5:1101:15958:27749,LH00995:25:23T55JLT4:5:1105:35601:16035,LH00995:25:23T55JLT4:5:1135:16088:7039,LH00995:25:23T55JLT4:5:1135:44597:18894,LH00995:25:23T55JLT4:5:1137:25747:5722,LH00995:25:23T55JLT4:5:1152:19761:12336,LH00995:25:23T55JLT4:5:1165:46142:12854,LH00995:25:23T55JLT4:5:1166:6728:22159,LH00995:25:23T55JLT4:5:1171:6614:24765,LH00995:25:23T55JLT4:5:1182:32333:13737,LH00995:25:23T55JLT4:5:1192:51142:16021,LH00995:25:23T55JLT4:5:1209:2464:9449,LH00995:25:23T55JLT4:5:1218:42324:21794,LH00995:25:23T55JLT4:5:1225:7270:12812,LH00995:25:23T55JLT4:5:1237:22220:13849,LH00995:25:23T55JLT4:5:1247:16128:24373,LH00995:25:23T55JLT4:5:1257:39872:26096,LH00995:25:23T55JLT4:5:1260:16889:14144,LH00995:25:23T55JLT4:5:1261:7561:12560,LH00995:25:23T55JLT4:5:1277:16776:3746,LH00995:25:23T55JLT4:5:1289:27915:7292,LH00995:25:23T55JLT4:5:1290:39209:11159,LH00995:25:23T55JLT4:5:1301:46409:24723,LH00995:25:23T55JLT4:5:1316:19138:26923,LH00995:25:23T55JLT4:5:1323:7181:28436,LH00995:25:23T55JLT4:5:1337:39978:21010,LH00995:25:23T55JLT4:5:1339:36903:3158,LH00995:25:23T55JLT4:5:1348:31515:13695,LH00995:25:23T55JLT4:5:1411:21872:13275,LH00995:25:23T55JLT4:5:1415:8920:27525,LH00995:25:23T55JLT4:5:1433:12415:15531,LH00995:25:23T55JLT4:5:1433:4956:13625,LH00995:25:23T55JLT4:5:1443:27082:28997,LH00995:25:23T55JLT4:5:1451:1582:1729,LH00995:25:23T55JLT4:5:1471:25035:16960,LH00995:25:23T55JLT4:5:1473:27746:22159,LH00995:25:23T55JLT4:5:1479:48424:13835,LH00995:25:23T55JLT4:5:1492:6873:15124,LH00995:25:23T55JLT4:5:2124:36135:15475,LH00995:25:23T55JLT4:5:2131:27770:2920,LH00995:25:23T55JLT4:5:2132:27284:23013,LH00995:25:23T55JLT4:5:2144:13782:19524,LH00995:25:23T55JLT4:5:2148:17196:9463,LH00995:25:23T55JLT4:5:2176:48731:25662,LH00995:25:23T55JLT4:5:2181:21427:6843,LH00995:25:23T55JLT4:5:2183:38869:20043,LH00995:25:23T55JLT4:5:2212:1542:26544,LH00995:25:23T55JLT4:5:2225:37089:7908,LH00995:25:23T55JLT4:5:2243:6623:26544,LH00995:25:23T55JLT4:5:2271:14373:17436,LH00995:25:23T55JLT4:5:2272:21856:14087,LH00995:25:23T55JLT4:5:2284:37065:10837,LH00995:25:23T55JLT4:5:2290:26265:24415,LH00995:25:23T55JLT4:5:2290:45754:20449,LH00995:25:23T55JLT4:5:2292:28506:19272,LH00995:25:23T55JLT4:5:2305:35205:7193,LH00995:25:23T55JLT4:5:2307:34007:23223,LH00995:25:23T55JLT4:5:2309:16347:15419,LH00995:25:23T55JLT4:5:2348:8597:26825,LH00995:25:23T55JLT4:5:2351:20877:8469,LH00995:25:23T55JLT4:5:2410:23434:8216,LH00995:25:23T55JLT4:5:2424:18232:2289,LH00995:25:23T55JLT4:5:2429:3904:8861,LH00995:25:23T55JLT4:5:2431:31524:4881,LH00995:25:23T55JLT4:5:2437:13904:23770,LH00995:25:23T55JLT4:5:2481:15222:24260,LH00995:25:23T55JLT4:5:2482:10360:1182,LH00995:25:23T55JLT4:6:1111:26621:2275,LH00995:25:23T55JLT4:6:1115:47623:6927,LH00995:25:23T55JLT4:6:1117:12188:11411,LH00995:25:23T55JLT4:6:1120:7545:8272,LH00995:25:23T55JLT4:6:1129:17649:4475,LH00995:25:23T55JLT4:6:1134:25755:28969,LH00995:25:23T55JLT4:6:1148:4285:21598,LH00995:25:23T55JLT4:6:1163:5029:10024,LH00995:25:23T55JLT4:6:1166:42388:9043,LH00995:25:23T55JLT4:6:1173:6590:16035,LH00995:25:23T55JLT4:6:1196:22091:20659,LH00995:25:23T55JLT4:6:1275:22204:17296,LH00995:25:23T55JLT4:6:1320:16767:4433,LH00995:25:23T55JLT4:6:1324:38521:26839,LH00995:25:23T55JLT4:6:1330:19664:8384,LH00995:25:23T55JLT4:6:1342:12908:5372,LH00995:25:23T55JLT4:6:1377:44896:27511,LH00995:25:23T55JLT4:6:1379:27357:23532,LH00995:25:23T55JLT4:6:1379:41240:23728,LH00995:25:23T55JLT4:6:1436:8936:18389,LH00995:25:23T55JLT4:6:2123:30067:8889,LH00995:25:23T55JLT4:6:2136:29210:29711,LH00995:25:23T55JLT4:6:2190:46150:26628,LH00995:25:23T55JLT4:6:2203:22252:23378,LH00995:25:23T55JLT4:6:2204:6129:28688,LH00995:25:23T55JLT4:6:2279:11679:23924,LH00995:25:23T55JLT4:6:2281:10676:2990,LH00995:25:23T55JLT4:6:2312:21767:9898,LH00995:25:23T55JLT4:6:2315:31718:17745,LH00995:25:23T55JLT4:6:2338:25302:21374,LH00995:25:23T55JLT4:6:2354:41668:10430,LH00995:25:23T55JLT4:6:2404:14292:25031,LH00995:25:23T55JLT4:6:2475:38918:11635,LH00995:25:23T55JLT4:8:1184:48585:16414,LH00995:25:23T55JLT4:8:1240:47348:12700,LH00995:25:23T55JLT4:8:1282:13531:22369,LH00995:25:23T55JLT4:8:1284:14276:19566,LH00995:25:23T55JLT4:8:1284:27996:11131,LH00995:25:23T55JLT4:8:1357:39816:7978,LH00995:25:23T55JLT4:8:1393:18968:24891,LH00995:25:23T55JLT4:8:1438:10481:29529,LH00995:25:23T55JLT4:8:1451:34501:1322,LH00995:25:23T55JLT4:8:1467:6736:12728,LH00995:25:23T55JLT4:8:2169:44904:21304,LH00995:25:23T55JLT4:8:2217:34379:2738,LH00995:25:23T55JLT4:8:2263:32778:8903,LH00995:25:23T55JLT4:8:2297:30003:23406,LH00995:25:23T55JLT4:8:2417:27535:4391	.	NO_LDAS	0.4207	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr6--chr11]""]"	chr6:31269493-chr11:72013673	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	124
HLA-A--C12orf40	122	0	122.0	0.0	INCL_NON_REF_SPLICE	HLA-A^ENSG00000206503.13	chr6:29942951:+	C12orf40^ENSG00000180116.15	chr12:39716794:+	LH00995:25:23T55JLT4:2:1103:46660:5232,LH00995:25:23T55JLT4:2:1125:51951:8483,LH00995:25:23T55JLT4:2:1127:25399:18880,LH00995:25:23T55JLT4:2:1134:9980:15405,LH00995:25:23T55JLT4:2:1143:7512:5638,LH00995:25:23T55JLT4:2:1145:33133:25914,LH00995:25:23T55JLT4:2:1148:1307:14424,LH00995:25:23T55JLT4:2:1149:41935:23644,LH00995:25:23T55JLT4:2:1157:30698:29263,LH00995:25:23T55JLT4:2:1163:25310:16456,LH00995:25:23T55JLT4:2:1164:41749:2079,LH00995:25:23T55JLT4:5:1107:43286:17436,LH00995:25:23T55JLT4:5:1113:20270:29109,LH00995:25:23T55JLT4:5:1143:39314:25690,LH00995:25:23T55JLT4:5:1145:49281:21906,LH00995:25:23T55JLT4:5:1154:25674:15349,LH00995:25:23T55JLT4:5:1161:36766:20968,LH00995:25:23T55JLT4:5:1198:34452:12056,LH00995:25:23T55JLT4:5:1213:1089:10570,LH00995:25:23T55JLT4:5:1225:36491:21808,LH00995:25:23T55JLT4:5:1258:6979:12168,LH00995:25:23T55JLT4:5:1259:34444:25634,LH00995:25:23T55JLT4:5:1264:42736:8553,LH00995:25:23T55JLT4:5:1273:2683:4951,LH00995:25:23T55JLT4:5:1295:29525:25185,LH00995:25:23T55JLT4:5:1303:24542:11257,LH00995:25:23T55JLT4:5:1310:30124:3270,LH00995:25:23T55JLT4:5:1315:40916:4447,LH00995:25:23T55JLT4:5:1320:5708:24737,LH00995:25:23T55JLT4:5:1326:27818:28870,LH00995:25:23T55JLT4:5:1353:34436:21472,LH00995:25:23T55JLT4:5:1355:47882:13345,LH00995:25:23T55JLT4:5:1373:43133:1925,LH00995:25:23T55JLT4:5:1381:3192:9029,LH00995:25:23T55JLT4:5:1381:40576:1841,LH00995:25:23T55JLT4:5:1398:1170:13513,LH00995:25:23T55JLT4:5:1416:13256:19118,LH00995:25:23T55JLT4:5:1423:39905:21108,LH00995:25:23T55JLT4:5:1426:45058:11958,LH00995:25:23T55JLT4:5:1448:36636:25844,LH00995:25:23T55JLT4:5:1464:14187:16918,LH00995:25:23T55JLT4:5:1465:20198:17296,LH00995:25:23T55JLT4:5:1468:9907:3760,LH00995:25:23T55JLT4:5:2111:44201:11117,LH00995:25:23T55JLT4:5:2152:14049:10206,LH00995:25:23T55JLT4:5:2170:51732:18473,LH00995:25:23T55JLT4:5:2176:27155:15279,LH00995:25:23T55JLT4:5:2185:19583:16119,LH00995:25:23T55JLT4:5:2236:11307:17282,LH00995:25:23T55JLT4:5:2248:6784:15839,LH00995:25:23T55JLT4:5:2266:8694:17044,LH00995:25:23T55JLT4:5:2295:39411:3915,LH00995:25:23T55JLT4:5:2304:17722:1294,LH00995:25:23T55JLT4:5:2319:44273:17801,LH00995:25:23T55JLT4:5:2367:10037:22088,LH00995:25:23T55JLT4:5:2369:24663:28926,LH00995:25:23T55JLT4:5:2373:40843:1350,LH00995:25:23T55JLT4:5:2447:7618:28324,LH00995:25:23T55JLT4:5:2466:26605:20015,LH00995:25:23T55JLT4:5:2476:21710:7193,LH00995:25:23T55JLT4:6:1101:40787:19580,LH00995:25:23T55JLT4:6:1140:49767:11313,LH00995:25:23T55JLT4:6:1161:21249:7207,LH00995:25:23T55JLT4:6:1164:36070:22453,LH00995:25:23T55JLT4:6:1170:11970:8230,LH00995:25:23T55JLT4:6:1190:44759:2387,LH00995:25:23T55JLT4:6:1223:43238:11719,LH00995:25:23T55JLT4:6:1259:43359:25269,LH00995:25:23T55JLT4:6:1260:40803:15293,LH00995:25:23T55JLT4:6:1291:13014:21360,LH00995:25:23T55JLT4:6:1326:20335:2177,LH00995:25:23T55JLT4:6:1332:49386:9393,LH00995:25:23T55JLT4:6:1343:25545:9547,LH00995:25:23T55JLT4:6:1346:12083:23139,LH00995:25:23T55JLT4:6:1384:36564:12126,LH00995:25:23T55JLT4:6:1446:14575:18291,LH00995:25:23T55JLT4:6:1464:42599:12098,LH00995:25:23T55JLT4:6:1476:13014:7011,LH00995:25:23T55JLT4:6:1498:49241:11439,LH00995:25:23T55JLT4:6:2103:14130:8665,LH00995:25:23T55JLT4:6:2114:27503:25914,LH00995:25:23T55JLT4:6:2122:30626:24344,LH00995:25:23T55JLT4:6:2124:38667:2093,LH00995:25:23T55JLT4:6:2210:42049:29277,LH00995:25:23T55JLT4:6:2238:18442:14592,LH00995:25:23T55JLT4:6:2275:36814:16063,LH00995:25:23T55JLT4:6:2325:42785:18249,LH00995:25:23T55JLT4:6:2348:13224:4041,LH00995:25:23T55JLT4:6:2353:34978:25662,LH00995:25:23T55JLT4:6:2385:28004:17310,LH00995:25:23T55JLT4:6:2392:39516:20295,LH00995:25:23T55JLT4:6:2406:8952:13177,LH00995:25:23T55JLT4:6:2421:16500:13919,LH00995:25:23T55JLT4:6:2488:15093:24989,LH00995:25:23T55JLT4:6:2488:15327:24639,LH00995:25:23T55JLT4:8:1103:12666:19384,LH00995:25:23T55JLT4:8:1189:17609:12476,LH00995:25:23T55JLT4:8:1193:22414:12224,LH00995:25:23T55JLT4:8:1195:45535:29263,LH00995:25:23T55JLT4:8:1198:30205:3158,LH00995:25:23T55JLT4:8:1202:41774:11313,LH00995:25:23T55JLT4:8:1228:20400:10388,LH00995:25:23T55JLT4:8:1241:6849:16119,LH00995:25:23T55JLT4:8:1269:32875:23756,LH00995:25:23T55JLT4:8:1275:17787:7740,LH00995:25:23T55JLT4:8:1326:37421:22719,LH00995:25:23T55JLT4:8:1344:10077:14284,LH00995:25:23T55JLT4:8:1347:35269:28772,LH00995:25:23T55JLT4:8:1384:30391:29319,LH00995:25:23T55JLT4:8:1466:2513:17296,LH00995:25:23T55JLT4:8:1475:14963:22635,LH00995:25:23T55JLT4:8:1496:40827:25143,LH00995:25:23T55JLT4:8:2120:27341:5204,LH00995:25:23T55JLT4:8:2121:20675:23840,LH00995:25:23T55JLT4:8:2157:9899:3158,LH00995:25:23T55JLT4:8:2255:29906:22817,LH00995:25:23T55JLT4:8:2259:24550:19230,LH00995:25:23T55JLT4:8:2271:44492:25297,LH00995:25:23T55JLT4:8:2330:16209:14059,LH00995:25:23T55JLT4:8:2411:26775:12238,LH00995:25:23T55JLT4:8:2476:6064:9800,LH00995:25:23T55JLT4:8:2486:3200:17506	.	NO_LDAS	0.4141	AT	1.5656	AC	1.7056	"[""INTERCHROMOSOMAL[chr6--chr12]""]"	chr6:29942951-chr12:39716794	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	122
LEPROT--LEPR	117	1	117.0	1.0	ONLY_REF_SPLICE	LEPROT^ENSG00000213625.9	chr1:65425378:+	LEPR^ENSG00000116678.20	chr1:65565546:+	LH00995:25:23T55JLT4:2:1108:36240:7698,LH00995:25:23T55JLT4:2:1127:43990:17394,LH00995:25:23T55JLT4:2:1157:24574:4867,LH00995:25:23T55JLT4:5:1102:21411:23266,LH00995:25:23T55JLT4:5:1104:48747:26642,LH00995:25:23T55JLT4:5:1122:14001:15138,LH00995:25:23T55JLT4:5:1129:20772:12854,LH00995:25:23T55JLT4:5:1159:13588:17450,LH00995:25:23T55JLT4:5:1170:36313:14550,LH00995:25:23T55JLT4:5:1212:30739:17338,LH00995:25:23T55JLT4:5:1220:48310:21010,LH00995:25:23T55JLT4:5:1248:19364:2121,LH00995:25:23T55JLT4:5:1254:17973:23027,LH00995:25:23T55JLT4:5:1273:26427:6479,LH00995:25:23T55JLT4:5:1289:37737:28870,LH00995:25:23T55JLT4:5:1297:18717:25718,LH00995:25:23T55JLT4:5:1320:46377:16876,LH00995:25:23T55JLT4:5:1340:16500:10725,LH00995:25:23T55JLT4:5:1361:31604:26376,LH00995:25:23T55JLT4:5:1385:1453:16582,LH00995:25:23T55JLT4:5:1385:23571:23055,LH00995:25:23T55JLT4:5:1408:47493:9141,LH00995:25:23T55JLT4:5:1438:22341:12406,LH00995:25:23T55JLT4:5:1439:46611:3214,LH00995:25:23T55JLT4:5:1444:8143:6086,LH00995:25:23T55JLT4:5:1468:16840:23364,LH00995:25:23T55JLT4:5:2142:8766:12154,LH00995:25:23T55JLT4:5:2153:5919:5540,LH00995:25:23T55JLT4:5:2165:2327:1617,LH00995:25:23T55JLT4:5:2189:11905:6997,LH00995:25:23T55JLT4:5:2193:33481:4265,LH00995:25:23T55JLT4:5:2205:38999:4461,LH00995:25:23T55JLT4:5:2256:49985:20547,LH00995:25:23T55JLT4:5:2273:36895:20099,LH00995:25:23T55JLT4:5:2310:15513:3550,LH00995:25:23T55JLT4:5:2363:15303:25269,LH00995:25:23T55JLT4:5:2376:11307:9519,LH00995:25:23T55JLT4:5:2384:30035:10654,LH00995:25:23T55JLT4:5:2411:15530:9968,LH00995:25:23T55JLT4:5:2443:50131:7039,LH00995:25:23T55JLT4:5:2466:50818:11677,LH00995:25:23T55JLT4:5:2470:4471:27273,LH00995:25:23T55JLT4:5:2474:16695:12854,LH00995:25:23T55JLT4:6:1103:22633:28408,LH00995:25:23T55JLT4:6:1119:23264:15937,LH00995:25:23T55JLT4:6:1143:36450:22215,LH00995:25:23T55JLT4:6:1144:50414:28352,LH00995:25:23T55JLT4:6:1153:33036:9351,LH00995:25:23T55JLT4:6:1161:42073:17549,LH00995:25:23T55JLT4:6:1178:1898:3060,LH00995:25:23T55JLT4:6:1181:13451:19174,LH00995:25:23T55JLT4:6:1184:42154:13485,LH00995:25:23T55JLT4:6:1185:7318:27749,LH00995:25:23T55JLT4:6:1186:14454:5946,LH00995:25:23T55JLT4:6:1198:18571:17254,LH00995:25:23T55JLT4:6:1214:16678:8595,LH00995:25:23T55JLT4:6:1227:25391:19510,LH00995:25:23T55JLT4:6:1227:25424:19510,LH00995:25:23T55JLT4:6:1267:15578:21486,LH00995:25:23T55JLT4:6:1268:6736:28702,LH00995:25:23T55JLT4:6:1290:48553:24429,LH00995:25:23T55JLT4:6:1294:21840:4671,LH00995:25:23T55JLT4:6:1331:48642:24751,LH00995:25:23T55JLT4:6:1341:47930:8216,LH00995:25:23T55JLT4:6:1403:29808:17885,LH00995:25:23T55JLT4:6:1407:35237:23560,LH00995:25:23T55JLT4:6:1463:32211:12770,LH00995:25:23T55JLT4:6:1464:50584:16904,LH00995:25:23T55JLT4:6:1474:31710:4811,LH00995:25:23T55JLT4:6:1484:15246:19734,LH00995:25:23T55JLT4:6:1485:22422:14172,LH00995:25:23T55JLT4:6:1490:44435:12392,LH00995:25:23T55JLT4:6:1492:43764:12966,LH00995:25:23T55JLT4:6:2137:21775:21038,LH00995:25:23T55JLT4:6:2161:21112:16105,LH00995:25:23T55JLT4:6:2173:23798:9604,LH00995:25:23T55JLT4:6:2210:10684:25339,LH00995:25:23T55JLT4:6:2234:39468:9982,LH00995:25:23T55JLT4:6:2284:36871:3606,LH00995:25:23T55JLT4:6:2368:2691:1406,LH00995:25:23T55JLT4:6:2420:43521:22215,LH00995:25:23T55JLT4:6:2445:42955:13863,LH00995:25:23T55JLT4:6:2466:19372:14914,LH00995:25:23T55JLT4:8:1122:22228:12574,LH00995:25:23T55JLT4:8:1125:1283:13933,LH00995:25:23T55JLT4:8:1175:37284:23209,LH00995:25:23T55JLT4:8:1186:10190:19552,LH00995:25:23T55JLT4:8:1187:15967:28912,LH00995:25:23T55JLT4:8:1192:44281:5708,LH00995:25:23T55JLT4:8:1196:11379:23938,LH00995:25:23T55JLT4:8:1218:20634:21612,LH00995:25:23T55JLT4:8:1219:41620:25423,LH00995:25:23T55JLT4:8:1232:38392:26362,LH00995:25:23T55JLT4:8:1243:32664:12854,LH00995:25:23T55JLT4:8:1251:3783:12995,LH00995:25:23T55JLT4:8:1267:9875:8356,LH00995:25:23T55JLT4:8:1276:34606:17002,LH00995:25:23T55JLT4:8:1278:18135:17058,LH00995:25:23T55JLT4:8:1323:18175:4097,LH00995:25:23T55JLT4:8:1331:8799:1504,LH00995:25:23T55JLT4:8:1368:37235:21472,LH00995:25:23T55JLT4:8:1382:13507:22159,LH00995:25:23T55JLT4:8:1426:20651:22957,LH00995:25:23T55JLT4:8:1455:33692:6647,LH00995:25:23T55JLT4:8:1457:44807:10290,LH00995:25:23T55JLT4:8:1470:10077:8258,LH00995:25:23T55JLT4:8:1482:10028:11817,LH00995:25:23T55JLT4:8:2129:8030:16091,LH00995:25:23T55JLT4:8:2185:24396:29249,LH00995:25:23T55JLT4:8:2190:52194:27231,LH00995:25:23T55JLT4:8:2206:12383:2079,LH00995:25:23T55JLT4:8:2277:32850:25620,LH00995:25:23T55JLT4:8:2277:40107:18543,LH00995:25:23T55JLT4:8:2287:19882:15461,LH00995:25:23T55JLT4:8:2375:7140:4097,LH00995:25:23T55JLT4:8:2415:50697:8441,LH00995:25:23T55JLT4:8:2422:19445:7278	LH00995:25:23T55JLT4:8:1120:43926:23167	YES_LDAS	0.4005	GT	1.8256	AG	1.9219	"[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]"	chr1:65425378-chr1:65565546	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	118
AC092807.3--DDAH1	94	1	94.0	1.0	ONLY_REF_SPLICE	AC092807.3^ENSG00000282057.1	chr1:85577984:-	DDAH1^ENSG00000153904.21	chr1:85358847:-	LH00995:25:23T55JLT4:2:1108:26839:29557,LH00995:25:23T55JLT4:2:1114:27139:20939,LH00995:25:23T55JLT4:2:1128:12164:3774,LH00995:25:23T55JLT4:2:1133:28061:27637,LH00995:25:23T55JLT4:2:1143:12577:16371,LH00995:25:23T55JLT4:2:1161:11501:10977,LH00995:25:23T55JLT4:2:1163:1405:11537,LH00995:25:23T55JLT4:5:1114:7496:21416,LH00995:25:23T55JLT4:5:1138:18038:26671,LH00995:25:23T55JLT4:5:1152:47971:25381,LH00995:25:23T55JLT4:5:1219:46094:17731,LH00995:25:23T55JLT4:5:1241:7618:15881,LH00995:25:23T55JLT4:5:1296:22997:22593,LH00995:25:23T55JLT4:5:1307:34590:3718,LH00995:25:23T55JLT4:5:1358:40479:24541,LH00995:25:23T55JLT4:5:1461:50834:15769,LH00995:25:23T55JLT4:5:2139:8257:12532,LH00995:25:23T55JLT4:5:2141:24356:26600,LH00995:25:23T55JLT4:5:2145:44225:16259,LH00995:25:23T55JLT4:5:2173:12941:17759,LH00995:25:23T55JLT4:5:2196:38756:7011,LH00995:25:23T55JLT4:5:2203:36782:13513,LH00995:25:23T55JLT4:5:2288:39654:18992,LH00995:25:23T55JLT4:5:2301:38748:16105,LH00995:25:23T55JLT4:5:2312:51902:5008,LH00995:25:23T55JLT4:5:2319:38343:6269,LH00995:25:23T55JLT4:5:2367:26839:26250,LH00995:25:23T55JLT4:5:2386:18628:10290,LH00995:25:23T55JLT4:5:2484:6291:14172,LH00995:25:23T55JLT4:5:2489:11234:22621,LH00995:25:23T55JLT4:5:2493:13766:6689,LH00995:25:23T55JLT4:6:1120:33376:9155,LH00995:25:23T55JLT4:6:1146:21241:14312,LH00995:25:23T55JLT4:6:1149:20562:26979,LH00995:25:23T55JLT4:6:1239:11841:12266,LH00995:25:23T55JLT4:6:1256:31305:20169,LH00995:25:23T55JLT4:6:1282:7852:14942,LH00995:25:23T55JLT4:6:1303:24671:17422,LH00995:25:23T55JLT4:6:1347:21419:23952,LH00995:25:23T55JLT4:6:1357:34379:4811,LH00995:25:23T55JLT4:6:1394:2934:28674,LH00995:25:23T55JLT4:6:1444:43707:9057,LH00995:25:23T55JLT4:6:1490:20327:18726,LH00995:25:23T55JLT4:6:2116:7690:19342,LH00995:25:23T55JLT4:6:2140:3993:23924,LH00995:25:23T55JLT4:6:2142:1243:3046,LH00995:25:23T55JLT4:6:2184:38085:25802,LH00995:25:23T55JLT4:6:2191:8629:28310,LH00995:25:23T55JLT4:6:2204:1558:18025,LH00995:25:23T55JLT4:6:2235:30828:23518,LH00995:25:23T55JLT4:6:2253:41046:20729,LH00995:25:23T55JLT4:6:2258:46935:15909,LH00995:25:23T55JLT4:6:2262:41240:14340,LH00995:25:23T55JLT4:6:2286:26484:29473,LH00995:25:23T55JLT4:6:2335:36426:25115,LH00995:25:23T55JLT4:6:2370:7852:20968,LH00995:25:23T55JLT4:6:2404:5150:21220,LH00995:25:23T55JLT4:6:2412:22026:3032,LH00995:25:23T55JLT4:6:2430:32033:12238,LH00995:25:23T55JLT4:6:2459:2189:23742,LH00995:25:23T55JLT4:6:2467:37041:18529,LH00995:25:23T55JLT4:6:2479:8961:20729,LH00995:25:23T55JLT4:6:2490:51150:15755,LH00995:25:23T55JLT4:6:2496:14033:15671,LH00995:25:23T55JLT4:8:1114:37227:13191,LH00995:25:23T55JLT4:8:1127:18005:16722,LH00995:25:23T55JLT4:8:1135:23409:29109,LH00995:25:23T55JLT4:8:1135:44613:28646,LH00995:25:23T55JLT4:8:1140:47121:22593,LH00995:25:23T55JLT4:8:1220:12674:8188,LH00995:25:23T55JLT4:8:1247:27058:10290,LH00995:25:23T55JLT4:8:1277:28255:14242,LH00995:25:23T55JLT4:8:1285:3896:15713,LH00995:25:23T55JLT4:8:1292:34978:16414,LH00995:25:23T55JLT4:8:1295:33716:21038,LH00995:25:23T55JLT4:8:1317:4584:17072,LH00995:25:23T55JLT4:8:1351:21508:23238,LH00995:25:23T55JLT4:8:1363:32082:28128,LH00995:25:23T55JLT4:8:1367:40827:19370,LH00995:25:23T55JLT4:8:1369:6914:21472,LH00995:25:23T55JLT4:8:1389:45924:12784,LH00995:25:23T55JLT4:8:1420:4001:5750,LH00995:25:23T55JLT4:8:1445:49758:25115,LH00995:25:23T55JLT4:8:1458:35423:10402,LH00995:25:23T55JLT4:8:2121:39808:25087,LH00995:25:23T55JLT4:8:2140:37324:17983,LH00995:25:23T55JLT4:8:2175:47631:14648,LH00995:25:23T55JLT4:8:2196:51441:11131,LH00995:25:23T55JLT4:8:2263:44678:8861,LH00995:25:23T55JLT4:8:2311:35253:26755,LH00995:25:23T55JLT4:8:2316:21985:5484,LH00995:25:23T55JLT4:8:2390:42186:18333,LH00995:25:23T55JLT4:8:2469:14195:7768,LH00995:25:23T55JLT4:8:2475:12714:14031	LH00995:25:23T55JLT4:8:2141:45843:5330	YES_LDAS	0.3224	GT	1.8062	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[17122]""]"	chr1:85577984-chr1:85358847	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	95
MTAP--CDKN2B-AS1	76	1	76.0	1.0	ONLY_REF_SPLICE	MTAP^ENSG00000099810.21	chr9:21838010:+	CDKN2B-AS1^ENSG00000240498.9	chr9:22112320:+	LH00995:25:23T55JLT4:2:1121:16735:20855,LH00995:25:23T55JLT4:2:1142:10012:19833,LH00995:25:23T55JLT4:5:1109:42930:9085,LH00995:25:23T55JLT4:5:1111:45956:19762,LH00995:25:23T55JLT4:5:1139:31613:16526,LH00995:25:23T55JLT4:5:1160:48602:25830,LH00995:25:23T55JLT4:5:1194:32753:24583,LH00995:25:23T55JLT4:5:1215:41337:16021,LH00995:25:23T55JLT4:5:1380:5118:1659,LH00995:25:23T55JLT4:5:1385:5401:19048,LH00995:25:23T55JLT4:5:1443:48860:19020,LH00995:25:23T55JLT4:5:1488:7965:15587,LH00995:25:23T55JLT4:5:1489:39921:27385,LH00995:25:23T55JLT4:5:2115:40730:24302,LH00995:25:23T55JLT4:5:2137:36547:5708,LH00995:25:23T55JLT4:5:2151:22293:3774,LH00995:25:23T55JLT4:5:2159:7593:29039,LH00995:25:23T55JLT4:5:2160:50980:11846,LH00995:25:23T55JLT4:5:2163:42275:22355,LH00995:25:23T55JLT4:5:2163:50584:10010,LH00995:25:23T55JLT4:5:2181:19599:23181,LH00995:25:23T55JLT4:5:2182:33514:10150,LH00995:25:23T55JLT4:5:2213:2869:27161,LH00995:25:23T55JLT4:5:2275:7601:3382,LH00995:25:23T55JLT4:5:2303:9778:4601,LH00995:25:23T55JLT4:5:2318:51862:8861,LH00995:25:23T55JLT4:5:2389:46207:13219,LH00995:25:23T55JLT4:6:1132:27438:27399,LH00995:25:23T55JLT4:6:1164:3613:11719,LH00995:25:23T55JLT4:6:1176:37049:20505,LH00995:25:23T55JLT4:6:1368:25537:26264,LH00995:25:23T55JLT4:6:1382:14761:16231,LH00995:25:23T55JLT4:6:1420:43642:17268,LH00995:25:23T55JLT4:6:1421:10975:19454,LH00995:25:23T55JLT4:6:1440:12771:15727,LH00995:25:23T55JLT4:6:1462:49775:26881,LH00995:25:23T55JLT4:6:1468:39889:21024,LH00995:25:23T55JLT4:6:2128:39767:9716,LH00995:25:23T55JLT4:6:2145:29663:12784,LH00995:25:23T55JLT4:6:2182:13159:28674,LH00995:25:23T55JLT4:6:2191:45398:21430,LH00995:25:23T55JLT4:6:2241:11695:3550,LH00995:25:23T55JLT4:6:2277:27147:6633,LH00995:25:23T55JLT4:6:2324:9381:14732,LH00995:25:23T55JLT4:6:2369:2497:22285,LH00995:25:23T55JLT4:6:2404:48998:14858,LH00995:25:23T55JLT4:6:2420:42291:1617,LH00995:25:23T55JLT4:6:2429:34768:29109,LH00995:25:23T55JLT4:6:2448:31305:12770,LH00995:25:23T55JLT4:6:2473:36111:7081,LH00995:25:23T55JLT4:8:1110:19599:29375,LH00995:25:23T55JLT4:8:1130:43926:15965,LH00995:25:23T55JLT4:8:1157:21209:4643,LH00995:25:23T55JLT4:8:1160:1421:13779,LH00995:25:23T55JLT4:8:1236:15044:4279,LH00995:25:23T55JLT4:8:1319:27810:28576,LH00995:25:23T55JLT4:8:1363:9041:9716,LH00995:25:23T55JLT4:8:1415:17665:13583,LH00995:25:23T55JLT4:8:1428:5781:1687,LH00995:25:23T55JLT4:8:1455:3362:17871,LH00995:25:23T55JLT4:8:2118:34857:21276,LH00995:25:23T55JLT4:8:2140:4827:22004,LH00995:25:23T55JLT4:8:2153:15182:22677,LH00995:25:23T55JLT4:8:2184:19728:14158,LH00995:25:23T55JLT4:8:2188:15554:20715,LH00995:25:23T55JLT4:8:2242:30084:19342,LH00995:25:23T55JLT4:8:2266:20311:13485,LH00995:25:23T55JLT4:8:2277:11744:8146,LH00995:25:23T55JLT4:8:2318:26742:13891,LH00995:25:23T55JLT4:8:2371:12140:25199,LH00995:25:23T55JLT4:8:2380:42372:24905,LH00995:25:23T55JLT4:8:2415:7585:23616,LH00995:25:23T55JLT4:8:2418:46013:20337,LH00995:25:23T55JLT4:8:2436:10886:25157,LH00995:25:23T55JLT4:8:2488:31693:22859,LH00995:25:23T55JLT4:8:2494:43157:18838	LH00995:25:23T55JLT4:5:1270:5547:12378	YES_LDAS	0.2614	GT	1.5301	AG	1.8323	"[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr9:0.06Mb]"",""NEIGHBORS[56488]""]"	chr9:21838010-chr9:22112320	False			1		PASS	77
COL8A1--CMSS1	62	0	62.0	0.0	INCL_NON_REF_SPLICE	COL8A1^ENSG00000144810.16	chr3:99794382:+	CMSS1^ENSG00000184220.12	chr3:100146973:+	LH00995:25:23T55JLT4:2:1163:44354:8833,LH00995:25:23T55JLT4:2:1165:16347:16428,LH00995:25:23T55JLT4:5:1103:19914:27035,LH00995:25:23T55JLT4:5:1115:22244:5344,LH00995:25:23T55JLT4:5:1249:24526:4503,LH00995:25:23T55JLT4:5:1281:33902:11131,LH00995:25:23T55JLT4:5:1321:7682:20337,LH00995:25:23T55JLT4:5:1356:45552:27245,LH00995:25:23T55JLT4:5:1367:35949:23672,LH00995:25:23T55JLT4:5:1403:6161:26755,LH00995:25:23T55JLT4:5:1429:9567:6058,LH00995:25:23T55JLT4:5:2115:14850:17983,LH00995:25:23T55JLT4:5:2126:51838:3634,LH00995:25:23T55JLT4:5:2137:35447:14732,LH00995:25:23T55JLT4:5:2177:51668:11243,LH00995:25:23T55JLT4:5:2188:29574:15377,LH00995:25:23T55JLT4:5:2258:15853:3550,LH00995:25:23T55JLT4:5:2371:22544:25171,LH00995:25:23T55JLT4:5:2390:21460:18333,LH00995:25:23T55JLT4:5:2438:36936:14480,LH00995:25:23T55JLT4:5:2442:10676:27651,LH00995:25:23T55JLT4:5:2444:47566:15573,LH00995:25:23T55JLT4:5:2482:4001:28730,LH00995:25:23T55JLT4:5:2497:36669:5274,LH00995:25:23T55JLT4:6:1138:17673:13121,LH00995:25:23T55JLT4:6:1152:34808:1603,LH00995:25:23T55JLT4:6:1264:12197:4783,LH00995:25:23T55JLT4:6:1264:8022:1168,LH00995:25:23T55JLT4:6:1297:34840:22145,LH00995:25:23T55JLT4:6:1370:7197:3410,LH00995:25:23T55JLT4:6:1378:28053:21570,LH00995:25:23T55JLT4:6:1437:28174:10402,LH00995:25:23T55JLT4:6:1439:37648:2569,LH00995:25:23T55JLT4:6:1489:10061:7642,LH00995:25:23T55JLT4:6:2156:18814:15012,LH00995:25:23T55JLT4:6:2168:19615:24751,LH00995:25:23T55JLT4:6:2189:32956:6885,LH00995:25:23T55JLT4:6:2235:4592:22691,LH00995:25:23T55JLT4:6:2309:13604:28772,LH00995:25:23T55JLT4:6:2333:43408:21122,LH00995:25:23T55JLT4:6:2379:21460:9702,LH00995:25:23T55JLT4:6:2405:6801:17633,LH00995:25:23T55JLT4:6:2464:39848:29221,LH00995:25:23T55JLT4:8:1115:38076:24667,LH00995:25:23T55JLT4:8:1151:28045:15335,LH00995:25:23T55JLT4:8:1192:13208:8609,LH00995:25:23T55JLT4:8:1226:5959:5722,LH00995:25:23T55JLT4:8:1468:23417:16904,LH00995:25:23T55JLT4:8:1498:40730:13541,LH00995:25:23T55JLT4:8:2122:26564:26699,LH00995:25:23T55JLT4:8:2129:27640:10402,LH00995:25:23T55JLT4:8:2167:50300:21178,LH00995:25:23T55JLT4:8:2188:3281:18151,LH00995:25:23T55JLT4:8:2215:23215:6773,LH00995:25:23T55JLT4:8:2237:45624:13359,LH00995:25:23T55JLT4:8:2251:7812:11481,LH00995:25:23T55JLT4:8:2258:7003:20393,LH00995:25:23T55JLT4:8:2333:28733:29557,LH00995:25:23T55JLT4:8:2351:11210:13919,LH00995:25:23T55JLT4:8:2411:22956:8062,LH00995:25:23T55JLT4:8:2430:35083:28478,LH00995:25:23T55JLT4:8:2469:16800:13961	.	YES_LDAS	0.2104	GT	1.8323	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[18611]""]"	chr3:99794382-chr3:100146973	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	62
TMEM65--ANXA13	60	1	60.0	0.57	ONLY_REF_SPLICE	TMEM65^ENSG00000164983.8	chr8:124371854:-	ANXA13^ENSG00000104537.17	chr8:123684722:-	LH00995:25:23T55JLT4:2:1145:13693:13149,LH00995:25:23T55JLT4:5:1132:34751:2597,LH00995:25:23T55JLT4:5:1142:31410:24246,LH00995:25:23T55JLT4:5:1161:45091:20001,LH00995:25:23T55JLT4:5:1194:27851:20996,LH00995:25:23T55JLT4:5:1262:25019:22397,LH00995:25:23T55JLT4:5:1263:17884:19062,LH00995:25:23T55JLT4:5:1283:39371:21472,LH00995:25:23T55JLT4:5:1363:3476:21822,LH00995:25:23T55JLT4:5:1368:17811:20477,LH00995:25:23T55JLT4:5:1419:37785:3284,LH00995:25:23T55JLT4:5:1426:14526:15265,LH00995:25:23T55JLT4:5:1428:25561:5008,LH00995:25:23T55JLT4:5:1458:4632:13625,LH00995:25:23T55JLT4:5:2168:51999:24821,LH00995:25:23T55JLT4:5:2228:45034:18922,LH00995:25:23T55JLT4:5:2230:30893:12700,LH00995:25:23T55JLT4:5:2267:45811:14746,LH00995:25:23T55JLT4:5:2277:32923:25465,LH00995:25:23T55JLT4:5:2308:51287:5960,LH00995:25:23T55JLT4:5:2363:31815:3816,LH00995:25:23T55JLT4:5:2393:16792:9267,LH00995:25:23T55JLT4:5:2492:37793:10360,LH00995:25:23T55JLT4:6:1114:22964:4433,LH00995:25:23T55JLT4:6:1118:27495:29095,LH00995:25:23T55JLT4:6:1141:6016:13835,LH00995:25:23T55JLT4:6:1203:5765:23854,LH00995:25:23T55JLT4:6:1317:19720:26082,LH00995:25:23T55JLT4:6:1322:2683:27567,LH00995:25:23T55JLT4:6:1478:44120:18852,LH00995:25:23T55JLT4:6:2139:4851:1392,LH00995:25:23T55JLT4:6:2170:6849:11860,LH00995:25:23T55JLT4:6:2260:45301:12014,LH00995:25:23T55JLT4:6:2284:12674:1210,LH00995:25:23T55JLT4:6:2331:1421:1392,LH00995:25:23T55JLT4:6:2404:6744:28128,LH00995:25:23T55JLT4:6:2476:5296:3480,LH00995:25:23T55JLT4:8:1113:43966:13261,LH00995:25:23T55JLT4:8:1128:4705:12266,LH00995:25:23T55JLT4:8:1157:13523:22467,LH00995:25:23T55JLT4:8:1191:39816:23756,LH00995:25:23T55JLT4:8:1229:10926:26096,LH00995:25:23T55JLT4:8:1244:17673:13401,LH00995:25:23T55JLT4:8:1257:22188:1575,LH00995:25:23T55JLT4:8:1345:19502:23490,LH00995:25:23T55JLT4:8:1353:3095:28618,LH00995:25:23T55JLT4:8:1366:31216:12392,LH00995:25:23T55JLT4:8:1383:34485:27357,LH00995:25:23T55JLT4:8:1395:4301:2093,LH00995:25:23T55JLT4:8:1412:2804:1687,LH00995:25:23T55JLT4:8:1415:24356:8889,LH00995:25:23T55JLT4:8:2142:50478:18964,LH00995:25:23T55JLT4:8:2152:18887:18277,LH00995:25:23T55JLT4:8:2209:34072:29417,LH00995:25:23T55JLT4:8:2210:28627:6030,LH00995:25:23T55JLT4:8:2265:11072:11972,LH00995:25:23T55JLT4:8:2293:16298:2724,LH00995:25:23T55JLT4:8:2367:51716:1967,LH00995:25:23T55JLT4:8:2482:47841:9547,LH00995:25:23T55JLT4:8:2485:8872:14410	LH00995:25:23T55JLT4:6:1398:52153:25479	YES_LDAS	0.2055	GT	1.9656	AG	1.9219	"[""INTRACHROMOSOMAL[chr8:0.57Mb]""]"	chr8:124371854-chr8:123684722	False			1		PASS	61
ABLIM3--PTPRB	57	0	57.0	0.0	INCL_NON_REF_SPLICE	ABLIM3^ENSG00000173210.20	chr5:149251419:+	PTPRB^ENSG00000127329.16	chr12:70558894:-	LH00995:25:23T55JLT4:2:1103:17762:9351,LH00995:25:23T55JLT4:2:1132:9050:12084,LH00995:25:23T55JLT4:2:1159:10627:19776,LH00995:25:23T55JLT4:2:1166:22244:13807,LH00995:25:23T55JLT4:2:1167:5603:9281,LH00995:25:23T55JLT4:5:1145:31710:4755,LH00995:25:23T55JLT4:5:1170:48529:3648,LH00995:25:23T55JLT4:5:1252:24736:1729,LH00995:25:23T55JLT4:5:1289:22867:16764,LH00995:25:23T55JLT4:5:1422:6461:7824,LH00995:25:23T55JLT4:5:1448:17730:24064,LH00995:25:23T55JLT4:5:1485:8111:22481,LH00995:25:23T55JLT4:5:2182:50122:12462,LH00995:25:23T55JLT4:5:2264:20934:9435,LH00995:25:23T55JLT4:5:2353:14672:21038,LH00995:25:23T55JLT4:5:2357:25399:10612,LH00995:25:23T55JLT4:5:2367:32664:25830,LH00995:25:23T55JLT4:5:2470:24809:22733,LH00995:25:23T55JLT4:5:2489:9389:7516,LH00995:25:23T55JLT4:6:1185:38707:29515,LH00995:25:23T55JLT4:6:1230:44613:21388,LH00995:25:23T55JLT4:6:1254:16201:22285,LH00995:25:23T55JLT4:6:1257:38740:4517,LH00995:25:23T55JLT4:6:1267:37510:6983,LH00995:25:23T55JLT4:6:1292:7933:26124,LH00995:25:23T55JLT4:6:1302:24251:14256,LH00995:25:23T55JLT4:6:1307:24315:28408,LH00995:25:23T55JLT4:6:1405:27406:29697,LH00995:25:23T55JLT4:6:1406:50648:20379,LH00995:25:23T55JLT4:6:1426:16800:16820,LH00995:25:23T55JLT4:6:1443:27851:9085,LH00995:25:23T55JLT4:6:1449:42922:7109,LH00995:25:23T55JLT4:6:1475:22657:20911,LH00995:25:23T55JLT4:6:1483:24323:28030,LH00995:25:23T55JLT4:6:2138:5409:23602,LH00995:25:23T55JLT4:6:2184:31046:3130,LH00995:25:23T55JLT4:6:2226:45948:5232,LH00995:25:23T55JLT4:6:2329:33918:16876,LH00995:25:23T55JLT4:6:2434:29970:6479,LH00995:25:23T55JLT4:6:2473:30342:15755,LH00995:25:23T55JLT4:6:2491:18563:16736,LH00995:25:23T55JLT4:8:1106:27632:10052,LH00995:25:23T55JLT4:8:1113:51271:12238,LH00995:25:23T55JLT4:8:1147:15166:6451,LH00995:25:23T55JLT4:8:1162:21354:24401,LH00995:25:23T55JLT4:8:1227:42235:6507,LH00995:25:23T55JLT4:8:1235:45641:27735,LH00995:25:23T55JLT4:8:1344:6550:29529,LH00995:25:23T55JLT4:8:1356:43675:22341,LH00995:25:23T55JLT4:8:2107:45147:5526,LH00995:25:23T55JLT4:8:2167:24752:13975,LH00995:25:23T55JLT4:8:2214:8273:20127,LH00995:25:23T55JLT4:8:2361:30868:29277,LH00995:25:23T55JLT4:8:2377:45196:8721,LH00995:25:23T55JLT4:8:2475:4875:15447,LH00995:25:23T55JLT4:8:2495:18555:19104,LH00995:25:23T55JLT4:8:2496:49354:1378	.	NO_LDAS	0.1935	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr12]""]"	chr5:149251419-chr12:70558894	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	57
TBC1D13--AL442224.1	47	0	47.0	0.0	ONLY_REF_SPLICE	TBC1D13^ENSG00000107021.16	chr9:128792574:+	AL442224.1^ENSG00000231990.2	chr9:93825711:+	LH00995:25:23T55JLT4:5:1121:17795:17591,LH00995:25:23T55JLT4:5:1193:17714:7530,LH00995:25:23T55JLT4:5:1291:3888:10711,LH00995:25:23T55JLT4:5:1395:37696:23448,LH00995:25:23T55JLT4:5:1398:9575:27623,LH00995:25:23T55JLT4:5:1411:22147:25297,LH00995:25:23T55JLT4:5:1492:33651:27203,LH00995:25:23T55JLT4:5:2139:11679:18263,LH00995:25:23T55JLT4:5:2158:38983:3312,LH00995:25:23T55JLT4:5:2267:42235:5918,LH00995:25:23T55JLT4:5:2286:13774:20435,LH00995:25:23T55JLT4:5:2294:46927:7684,LH00995:25:23T55JLT4:5:2329:31475:13877,LH00995:25:23T55JLT4:5:2366:26338:14228,LH00995:25:23T55JLT4:5:2463:7699:6213,LH00995:25:23T55JLT4:6:1102:17042:17661,LH00995:25:23T55JLT4:6:1174:15424:4713,LH00995:25:23T55JLT4:6:1236:24631:22397,LH00995:25:23T55JLT4:6:1256:16112:25241,LH00995:25:23T55JLT4:6:1282:42486:25522,LH00995:25:23T55JLT4:6:1337:31556:4013,LH00995:25:23T55JLT4:6:1420:31524:12084,LH00995:25:23T55JLT4:6:1462:3063:28394,LH00995:25:23T55JLT4:6:1487:5352:22074,LH00995:25:23T55JLT4:6:2144:7165:10500,LH00995:25:23T55JLT4:6:2190:30011:24176,LH00995:25:23T55JLT4:6:2358:3103:20813,LH00995:25:23T55JLT4:6:2390:47728:10528,LH00995:25:23T55JLT4:6:2417:29137:23223,LH00995:25:23T55JLT4:6:2482:22172:28983,LH00995:25:23T55JLT4:8:1153:44945:9632,LH00995:25:23T55JLT4:8:1156:5207:11789,LH00995:25:23T55JLT4:8:1186:21209:5428,LH00995:25:23T55JLT4:8:1192:44338:7600,LH00995:25:23T55JLT4:8:1288:42704:27133,LH00995:25:23T55JLT4:8:1335:33303:13849,LH00995:25:23T55JLT4:8:1362:51465:5260,LH00995:25:23T55JLT4:8:1370:35051:22621,LH00995:25:23T55JLT4:8:1377:16120:10739,LH00995:25:23T55JLT4:8:1421:22681:2457,LH00995:25:23T55JLT4:8:2181:44799:6128,LH00995:25:23T55JLT4:8:2198:9211:27021,LH00995:25:23T55JLT4:8:2329:13920:24499,LH00995:25:23T55JLT4:8:2332:26200:18669,LH00995:25:23T55JLT4:8:2376:18620:24429,LH00995:25:23T55JLT4:8:2395:4891:4209,LH00995:25:23T55JLT4:8:2410:20400:2962	.	YES_LDAS	0.1595	GT	1.9329	AG	1.9086	"[""INTRACHROMOSOMAL[chr9:34.93Mb]""]"	chr9:128792574-chr9:93825711	False			1		PASS	47
B4GALT6--DSC3	47	0	47.0	0.0	ONLY_REF_SPLICE	B4GALT6^ENSG00000118276.11	chr18:31684312:-	DSC3^ENSG00000134762.17	chr18:30994372:-	LH00995:25:23T55JLT4:2:1124:36192:28156,LH00995:25:23T55JLT4:2:1131:8880:11173,LH00995:25:23T55JLT4:5:1119:44257:24947,LH00995:25:23T55JLT4:5:1132:2464:5442,LH00995:25:23T55JLT4:5:1207:30998:29641,LH00995:25:23T55JLT4:5:1257:39670:6044,LH00995:25:23T55JLT4:5:1311:19089:12882,LH00995:25:23T55JLT4:5:1318:30140:13499,LH00995:25:23T55JLT4:5:1345:25197:24134,LH00995:25:23T55JLT4:5:1391:36467:6549,LH00995:25:23T55JLT4:5:1403:36798:24134,LH00995:25:23T55JLT4:5:1458:26880:14158,LH00995:25:23T55JLT4:5:1461:10668:22397,LH00995:25:23T55JLT4:5:2139:7610:4629,LH00995:25:23T55JLT4:5:2205:15497:3382,LH00995:25:23T55JLT4:5:2230:37777:4643,LH00995:25:23T55JLT4:5:2247:42841:4475,LH00995:25:23T55JLT4:5:2255:46118:17016,LH00995:25:23T55JLT4:5:2334:10045:16414,LH00995:25:23T55JLT4:5:2379:21120:2499,LH00995:25:23T55JLT4:5:2388:40673:3802,LH00995:25:23T55JLT4:6:1175:10991:4405,LH00995:25:23T55JLT4:6:1177:21549:25998,LH00995:25:23T55JLT4:6:1226:26815:13457,LH00995:25:23T55JLT4:6:1332:12108:16736,LH00995:25:23T55JLT4:6:1377:28085:7978,LH00995:25:23T55JLT4:6:1395:32341:17955,LH00995:25:23T55JLT4:6:1398:22350:4433,LH00995:25:23T55JLT4:6:1482:33344:27259,LH00995:25:23T55JLT4:6:1483:50260:6507,LH00995:25:23T55JLT4:6:2106:15950:7950,LH00995:25:23T55JLT4:6:2421:31896:19482,LH00995:25:23T55JLT4:6:2494:30496:26979,LH00995:25:23T55JLT4:8:1208:39185:8511,LH00995:25:23T55JLT4:8:1241:37178:15180,LH00995:25:23T55JLT4:8:1260:5142:6437,LH00995:25:23T55JLT4:8:1264:42833:17969,LH00995:25:23T55JLT4:8:1314:17358:29361,LH00995:25:23T55JLT4:8:1323:17131:17002,LH00995:25:23T55JLT4:8:1394:37405:6213,LH00995:25:23T55JLT4:8:1456:18013:4601,LH00995:25:23T55JLT4:8:1487:37405:25017,LH00995:25:23T55JLT4:8:2164:1194:20589,LH00995:25:23T55JLT4:8:2181:9899:2121,LH00995:25:23T55JLT4:8:2265:28644:11439,LH00995:25:23T55JLT4:8:2341:11541:15307,LH00995:25:23T55JLT4:8:2415:24857:27525	.	YES_LDAS	0.1595	GT	1.8323	AG	1.9086	"[""INTRACHROMOSOMAL[chr18:0.58Mb]""]"	chr18:31684312-chr18:30994372	False			1		PASS	47
TMEM65--ANXA13	45	1	45.0	0.43	ONLY_REF_SPLICE	TMEM65^ENSG00000164983.8	chr8:124371854:-	ANXA13^ENSG00000104537.17	chr8:123688946:-	LH00995:25:23T55JLT4:2:1108:9187:11565,LH00995:25:23T55JLT4:5:1137:25408:8441,LH00995:25:23T55JLT4:5:1217:4964:3774,LH00995:25:23T55JLT4:5:1274:13531:5610,LH00995:25:23T55JLT4:5:1277:43351:2275,LH00995:25:23T55JLT4:5:1295:11266:8497,LH00995:25:23T55JLT4:5:1450:30197:20015,LH00995:25:23T55JLT4:5:1494:24356:23322,LH00995:25:23T55JLT4:5:2232:23555:2289,LH00995:25:23T55JLT4:5:2260:39355:1434,LH00995:25:23T55JLT4:5:2273:19558:20141,LH00995:25:23T55JLT4:5:2363:5272:15545,LH00995:25:23T55JLT4:6:1131:28029:3929,LH00995:25:23T55JLT4:6:1233:24477:8006,LH00995:25:23T55JLT4:6:1250:26904:11005,LH00995:25:23T55JLT4:6:1270:14656:22663,LH00995:25:23T55JLT4:6:1293:11582:1056,LH00995:25:23T55JLT4:6:1330:11258:10697,LH00995:25:23T55JLT4:6:1368:3743:7207,LH00995:25:23T55JLT4:6:1370:27527:12028,LH00995:25:23T55JLT4:6:1381:15886:1701,LH00995:25:23T55JLT4:6:1454:14300:15909,LH00995:25:23T55JLT4:6:2146:13321:23630,LH00995:25:23T55JLT4:6:2150:10433:27848,LH00995:25:23T55JLT4:6:2276:45196:28254,LH00995:25:23T55JLT4:6:2335:18402:29711,LH00995:25:23T55JLT4:6:2346:27074:16315,LH00995:25:23T55JLT4:6:2376:5272:29529,LH00995:25:23T55JLT4:6:2402:19631:28114,LH00995:25:23T55JLT4:8:1251:43812:5820,LH00995:25:23T55JLT4:8:1268:25537:6507,LH00995:25:23T55JLT4:8:1286:8143:21500,LH00995:25:23T55JLT4:8:1337:43222:13933,LH00995:25:23T55JLT4:8:1419:51643:28464,LH00995:25:23T55JLT4:8:1431:28635:1701,LH00995:25:23T55JLT4:8:1478:36847:13681,LH00995:25:23T55JLT4:8:2109:48359:25830,LH00995:25:23T55JLT4:8:2198:30359:22313,LH00995:25:23T55JLT4:8:2271:1947:28226,LH00995:25:23T55JLT4:8:2271:3904:17520,LH00995:25:23T55JLT4:8:2286:29355:3368,LH00995:25:23T55JLT4:8:2294:29711:9393,LH00995:25:23T55JLT4:8:2311:14761:5554,LH00995:25:23T55JLT4:8:2351:29347:25185,LH00995:25:23T55JLT4:8:2381:1558:6143	LH00995:25:23T55JLT4:6:1398:52153:25479	YES_LDAS	0.1542	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr8:0.57Mb]""]"	chr8:124371854-chr8:123688946	False			1		PASS	46
CLTC--VMP1	44	1	44.0	1.0	ONLY_REF_SPLICE	CLTC^ENSG00000141367.12	chr17:59690711:+	VMP1^ENSG00000062716.13	chr17:59838295:+	LH00995:25:23T55JLT4:5:1127:6509:20547,LH00995:25:23T55JLT4:5:1137:36086:18305,LH00995:25:23T55JLT4:5:1207:9551:26909,LH00995:25:23T55JLT4:5:1240:9033:12280,LH00995:25:23T55JLT4:5:1320:41159:13387,LH00995:25:23T55JLT4:5:1388:50794:21892,LH00995:25:23T55JLT4:5:1395:38133:7109,LH00995:25:23T55JLT4:5:1424:37939:4923,LH00995:25:23T55JLT4:5:2133:9802:15208,LH00995:25:23T55JLT4:5:2344:39921:1687,LH00995:25:23T55JLT4:5:2463:27381:10066,LH00995:25:23T55JLT4:5:2480:51660:17422,LH00995:25:23T55JLT4:6:1112:24412:21570,LH00995:25:23T55JLT4:6:1127:6679:6157,LH00995:25:23T55JLT4:6:1147:25941:18585,LH00995:25:23T55JLT4:6:1240:29153:22467,LH00995:25:23T55JLT4:6:1261:13540:4727,LH00995:25:23T55JLT4:6:1274:49961:28660,LH00995:25:23T55JLT4:6:1293:32648:20253,LH00995:25:23T55JLT4:6:1309:46466:17899,LH00995:25:23T55JLT4:6:1348:38449:27806,LH00995:25:23T55JLT4:6:1443:27309:7334,LH00995:25:23T55JLT4:6:1464:42356:2149,LH00995:25:23T55JLT4:6:2184:3904:3788,LH00995:25:23T55JLT4:6:2241:5409:9477,LH00995:25:23T55JLT4:6:2351:3039:7642,LH00995:25:23T55JLT4:6:2407:48933:21220,LH00995:25:23T55JLT4:6:2431:12633:19917,LH00995:25:23T55JLT4:6:2439:48804:4853,LH00995:25:23T55JLT4:8:1208:44184:24849,LH00995:25:23T55JLT4:8:1254:5037:10038,LH00995:25:23T55JLT4:8:1262:9511:16806,LH00995:25:23T55JLT4:8:1266:32163:9407,LH00995:25:23T55JLT4:8:1285:45713:25732,LH00995:25:23T55JLT4:8:1290:29404:6787,LH00995:25:23T55JLT4:8:1307:40859:19090,LH00995:25:23T55JLT4:8:1396:14842:3985,LH00995:25:23T55JLT4:8:1447:3160:10542,LH00995:25:23T55JLT4:8:1453:50770:3046,LH00995:25:23T55JLT4:8:2188:21403:2513,LH00995:25:23T55JLT4:8:2206:43359:10977,LH00995:25:23T55JLT4:8:2291:21937:25325,LH00995:25:23T55JLT4:8:2378:28959:1532,LH00995:25:23T55JLT4:8:2484:30302:1532	LH00995:25:23T55JLT4:8:2228:21330:24387	YES_LDAS	0.1527	GT	1.8892	AG	1.8062	"[""Klijn_CellLines"",""Larsson_TCGA"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""NEIGHBORS[10236]""]"	chr17:59690711-chr17:59838295	False			1		PASS	45
IGH@-ext--CREB3L2	42	0	42.0	0.0	INCL_NON_REF_SPLICE	IGH@-ext^IGH.g@-ext	chr14:105760805:-	CREB3L2^ENSG00000182158.15	chr7:137928171:-	LH00995:25:23T55JLT4:2:1125:35156:7109,LH00995:25:23T55JLT4:5:1115:45657:13443,LH00995:25:23T55JLT4:5:1144:31127:2093,LH00995:25:23T55JLT4:5:1158:1955:11986,LH00995:25:23T55JLT4:5:1237:31896:18081,LH00995:25:23T55JLT4:5:1376:46636:9225,LH00995:25:23T55JLT4:5:1451:20521:22257,LH00995:25:23T55JLT4:5:1457:40641:25129,LH00995:25:23T55JLT4:5:1467:40908:26572,LH00995:25:23T55JLT4:5:2102:42494:7824,LH00995:25:23T55JLT4:5:2253:51660:4559,LH00995:25:23T55JLT4:5:2283:23773:28338,LH00995:25:23T55JLT4:5:2287:35876:18221,LH00995:25:23T55JLT4:5:2301:33174:4657,LH00995:25:23T55JLT4:5:2373:19421:19594,LH00995:25:23T55JLT4:5:2375:11024:15251,LH00995:25:23T55JLT4:5:2405:5983:21906,LH00995:25:23T55JLT4:5:2429:20845:2359,LH00995:25:23T55JLT4:6:1157:42453:20197,LH00995:25:23T55JLT4:6:1196:46822:26558,LH00995:25:23T55JLT4:6:1235:46628:13303,LH00995:25:23T55JLT4:6:1340:36192:10753,LH00995:25:23T55JLT4:6:1386:10320:20589,LH00995:25:23T55JLT4:6:1429:33991:23896,LH00995:25:23T55JLT4:6:1467:39735:26839,LH00995:25:23T55JLT4:6:2105:35407:7712,LH00995:25:23T55JLT4:6:2115:34072:23364,LH00995:25:23T55JLT4:6:2315:14316:29501,LH00995:25:23T55JLT4:6:2424:51927:21164,LH00995:25:23T55JLT4:6:2455:51441:26685,LH00995:25:23T55JLT4:8:1177:13572:17899,LH00995:25:23T55JLT4:8:1332:6744:20757,LH00995:25:23T55JLT4:8:1350:52161:8427,LH00995:25:23T55JLT4:8:1373:16646:29137,LH00995:25:23T55JLT4:8:1392:13022:27735,LH00995:25:23T55JLT4:8:1487:30472:25620,LH00995:25:23T55JLT4:8:2273:51829:9758,LH00995:25:23T55JLT4:8:2379:19405:15615,LH00995:25:23T55JLT4:8:2381:39913:11537,LH00995:25:23T55JLT4:8:2395:34129:16400,LH00995:25:23T55JLT4:8:2441:21274:2878,LH00995:25:23T55JLT4:8:2493:32413:21472	.	NO_LDAS	0.1426	CC	1.4566	CC	1.9656	"[""INTERCHROMOSOMAL[chr14--chr7]""]"	chr14:105760805-chr7:137928171	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	42
SAA4--SAA1	39	0	39.0	0.0	ONLY_REF_SPLICE	SAA4^ENSG00000148965.10	chr11:18232395:-	SAA1^ENSG00000173432.12	chr11:18269717:+	LH00995:25:23T55JLT4:5:1146:37510:6114,LH00995:25:23T55JLT4:5:1167:35601:4965,LH00995:25:23T55JLT4:5:1170:47356:1813,LH00995:25:23T55JLT4:5:1201:12601:16918,LH00995:25:23T55JLT4:5:1218:34549:14494,LH00995:25:23T55JLT4:5:1220:16379:23546,LH00995:25:23T55JLT4:5:1432:37672:23209,LH00995:25:23T55JLT4:5:2111:39120:22551,LH00995:25:23T55JLT4:5:2136:42024:6703,LH00995:25:23T55JLT4:5:2335:40673:27960,LH00995:25:23T55JLT4:5:2336:25594:16610,LH00995:25:23T55JLT4:5:2430:40932:7334,LH00995:25:23T55JLT4:6:1130:23474:24176,LH00995:25:23T55JLT4:6:1158:9066:3060,LH00995:25:23T55JLT4:6:1219:28263:13023,LH00995:25:23T55JLT4:6:1289:20707:22299,LH00995:25:23T55JLT4:6:1308:29299:27904,LH00995:25:23T55JLT4:6:1317:16598:24260,LH00995:25:23T55JLT4:6:1382:41240:5988,LH00995:25:23T55JLT4:6:1467:19397:27091,LH00995:25:23T55JLT4:6:2154:24623:7502,LH00995:25:23T55JLT4:6:2204:45972:16428,LH00995:25:23T55JLT4:6:2339:40228:5442,LH00995:25:23T55JLT4:6:2354:3856:4489,LH00995:25:23T55JLT4:8:1193:41895:12476,LH00995:25:23T55JLT4:8:1228:2141:11607,LH00995:25:23T55JLT4:8:1280:50907:17128,LH00995:25:23T55JLT4:8:1283:13184:28156,LH00995:25:23T55JLT4:8:1326:38861:4979,LH00995:25:23T55JLT4:8:1363:46984:10080,LH00995:25:23T55JLT4:8:2113:45374:28618,LH00995:25:23T55JLT4:8:2173:47598:7670,LH00995:25:23T55JLT4:8:2215:10465:14984,LH00995:25:23T55JLT4:8:2247:33279:12210,LH00995:25:23T55JLT4:8:2249:15619:1350,LH00995:25:23T55JLT4:8:2280:42308:21122,LH00995:25:23T55JLT4:8:2302:20812:14942,LH00995:25:23T55JLT4:8:2437:40334:5204,LH00995:25:23T55JLT4:8:2473:32066:22018	.	YES_LDAS	0.1324	GT	1.9329	AG	1.7819	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.03Mb]"",""LOCAL_INVERSION:-:+:[29458]""]"	chr11:18232395-chr11:18269717	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	39
RPSAP52--HMGA2	34	0	34.0	0.0	ONLY_REF_SPLICE	RPSAP52^ENSG00000241749.4	chr12:65826843:-	HMGA2^ENSG00000149948.14	chr12:65828001:+	LH00995:25:23T55JLT4:2:1153:19389:3929,LH00995:25:23T55JLT4:5:1108:49597:13681,LH00995:25:23T55JLT4:5:1276:17229:25942,LH00995:25:23T55JLT4:5:1280:13572:18319,LH00995:25:23T55JLT4:5:2201:24817:20925,LH00995:25:23T55JLT4:5:2231:13248:1224,LH00995:25:23T55JLT4:5:2279:48262:27539,LH00995:25:23T55JLT4:5:2319:27462:2331,LH00995:25:23T55JLT4:5:2403:46603:18389,LH00995:25:23T55JLT4:6:1121:42777:25157,LH00995:25:23T55JLT4:6:1151:2642:29599,LH00995:25:23T55JLT4:6:1191:49394:4055,LH00995:25:23T55JLT4:6:1235:12747:10220,LH00995:25:23T55JLT4:6:1286:49216:26586,LH00995:25:23T55JLT4:6:1384:29995:9015,LH00995:25:23T55JLT4:6:1391:43384:5106,LH00995:25:23T55JLT4:6:2117:40366:24681,LH00995:25:23T55JLT4:6:2163:4835:22439,LH00995:25:23T55JLT4:6:2220:42405:17282,LH00995:25:23T55JLT4:6:2308:32600:26699,LH00995:25:23T55JLT4:6:2321:21452:15208,LH00995:25:23T55JLT4:6:2427:23765:25718,LH00995:25:23T55JLT4:6:2442:26621:12560,LH00995:25:23T55JLT4:6:2479:7982:24807,LH00995:25:23T55JLT4:8:1141:11913:19847,LH00995:25:23T55JLT4:8:1256:8451:9814,LH00995:25:23T55JLT4:8:1277:27365:4237,LH00995:25:23T55JLT4:8:1387:28474:26390,LH00995:25:23T55JLT4:8:1460:7027:6955,LH00995:25:23T55JLT4:8:2114:35010:21794,LH00995:25:23T55JLT4:8:2133:13677:29095,LH00995:25:23T55JLT4:8:2216:11614:26334,LH00995:25:23T55JLT4:8:2228:43189:11663,LH00995:25:23T55JLT4:8:2311:51004:21528	.	YES_LDAS	0.1154	GT	1.9329	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[2537]""]"	chr12:65826843-chr12:65828001	False			1		PASS	34
CDV3--MT-RNR2	32	0	32.0	0.0	INCL_NON_REF_SPLICE	CDV3^ENSG00000091527.16	chr3:133575115:+	MT-RNR2^ENSG00000210082.2	chrM:2449:+	LH00995:25:23T55JLT4:2:1117:34266:10472,LH00995:25:23T55JLT4:5:1115:40285:8286,LH00995:25:23T55JLT4:5:1119:34258:9982,LH00995:25:23T55JLT4:5:1160:2335:29123,LH00995:25:23T55JLT4:5:1160:8936:15643,LH00995:25:23T55JLT4:5:1190:8378:28072,LH00995:25:23T55JLT4:5:1255:38109:29011,LH00995:25:23T55JLT4:5:2153:11007:11944,LH00995:25:23T55JLT4:5:2165:32786:2499,LH00995:25:23T55JLT4:5:2183:29493:11481,LH00995:25:23T55JLT4:5:2183:37502:20365,LH00995:25:23T55JLT4:5:2258:47145:29417,LH00995:25:23T55JLT4:5:2263:31645:15545,LH00995:25:23T55JLT4:5:2292:24469:9365,LH00995:25:23T55JLT4:5:2403:30472:10346,LH00995:25:23T55JLT4:5:2462:47178:5064,LH00995:25:23T55JLT4:5:2481:16800:13457,LH00995:25:23T55JLT4:6:1121:33020:2625,LH00995:25:23T55JLT4:6:1149:37510:3564,LH00995:25:23T55JLT4:6:1156:14567:29319,LH00995:25:23T55JLT4:6:1280:37203:25115,LH00995:25:23T55JLT4:6:1357:34404:10458,LH00995:25:23T55JLT4:6:2287:32956:21094,LH00995:25:23T55JLT4:6:2457:23652:9211,LH00995:25:23T55JLT4:8:1194:12083:11481,LH00995:25:23T55JLT4:8:1237:7464:6899,LH00995:25:23T55JLT4:8:1378:38772:27806,LH00995:25:23T55JLT4:8:1410:15950:3270,LH00995:25:23T55JLT4:8:1427:10247:16371,LH00995:25:23T55JLT4:8:2181:34929:28772,LH00995:25:23T55JLT4:8:2198:25408:13989,LH00995:25:23T55JLT4:8:2492:30723:19468	.	YES_LDAS	0.1086	GT	1.7968	AG	1.2419	"[""INTERCHROMOSOMAL[chr3--chrM]""]"	chr3:133575115-chrM:2449	False			0	Does not meet inclusion criteria	FAIL	32
TMEM123--PDGFD	31	0	31.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	PDGFD^ENSG00000170962.13	chr11:104000255:-	LH00995:25:23T55JLT4:2:1117:42882:11972,LH00995:25:23T55JLT4:2:1148:2464:5134,LH00995:25:23T55JLT4:5:1107:13782:16750,LH00995:25:23T55JLT4:5:1107:13790:16764,LH00995:25:23T55JLT4:5:1110:14963:7249,LH00995:25:23T55JLT4:5:1142:6404:23700,LH00995:25:23T55JLT4:5:1149:19000:10038,LH00995:25:23T55JLT4:5:1163:22382:17913,LH00995:25:23T55JLT4:5:1218:29671:7221,LH00995:25:23T55JLT4:5:1227:16606:15503,LH00995:25:23T55JLT4:5:1277:49993:12154,LH00995:25:23T55JLT4:5:1358:10020:24555,LH00995:25:23T55JLT4:5:2203:47267:2303,LH00995:25:23T55JLT4:5:2473:42251:22425,LH00995:25:23T55JLT4:5:2475:43950:16652,LH00995:25:23T55JLT4:6:1182:17398:24555,LH00995:25:23T55JLT4:6:1348:50616:23097,LH00995:25:23T55JLT4:6:1468:32810:29725,LH00995:25:23T55JLT4:6:2364:39775:25171,LH00995:25:23T55JLT4:6:2473:4115:12252,LH00995:25:23T55JLT4:6:2488:9834:12910,LH00995:25:23T55JLT4:8:1170:12237:2135,LH00995:25:23T55JLT4:8:1202:39225:27273,LH00995:25:23T55JLT4:8:1335:23523:5400,LH00995:25:23T55JLT4:8:1379:33489:1981,LH00995:25:23T55JLT4:8:1451:4187:6269,LH00995:25:23T55JLT4:8:1475:19906:1070,LH00995:25:23T55JLT4:8:2233:41685:12952,LH00995:25:23T55JLT4:8:2234:43052:17422,LH00995:25:23T55JLT4:8:2257:30529:11201,LH00995:25:23T55JLT4:8:2314:19656:6997	.	YES_LDAS	0.1052	GT	1.9656	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:1.44Mb]""]"	chr11:102448812-chr11:104000255	False			1		PASS	31
CHST11--MME	31	0	31.0	0.0	INCL_NON_REF_SPLICE	CHST11^ENSG00000171310.11	chr12:104601991:+	MME^ENSG00000196549.13	chr3:155183570:+	LH00995:25:23T55JLT4:2:1132:39614:3873,LH00995:25:23T55JLT4:5:1174:6218:15251,LH00995:25:23T55JLT4:5:1179:3791:27161,LH00995:25:23T55JLT4:5:1268:38246:19917,LH00995:25:23T55JLT4:5:1274:7100:28156,LH00995:25:23T55JLT4:5:1289:30569:13709,LH00995:25:23T55JLT4:5:1293:43602:21290,LH00995:25:23T55JLT4:5:1369:41596:21318,LH00995:25:23T55JLT4:5:1378:28700:13107,LH00995:25:23T55JLT4:5:1450:7132:6745,LH00995:25:23T55JLT4:5:1459:1744:14956,LH00995:25:23T55JLT4:5:2203:17601:5400,LH00995:25:23T55JLT4:5:2288:11792:22887,LH00995:25:23T55JLT4:5:2321:15651:18782,LH00995:25:23T55JLT4:5:2346:44257:3368,LH00995:25:23T55JLT4:5:2404:35407:7235,LH00995:25:23T55JLT4:5:2495:17172:2303,LH00995:25:23T55JLT4:6:1285:8540:22915,LH00995:25:23T55JLT4:6:1296:14802:9772,LH00995:25:23T55JLT4:6:2306:6566:8146,LH00995:25:23T55JLT4:6:2419:41369:1224,LH00995:25:23T55JLT4:8:1143:51158:26194,LH00995:25:23T55JLT4:8:1295:31532:17731,LH00995:25:23T55JLT4:8:1310:49710:17352,LH00995:25:23T55JLT4:8:1346:37276:13387,LH00995:25:23T55JLT4:8:1365:48804:25451,LH00995:25:23T55JLT4:8:1389:22131:2738,LH00995:25:23T55JLT4:8:2133:10223:10416,LH00995:25:23T55JLT4:8:2278:30658:23644,LH00995:25:23T55JLT4:8:2328:28951:2976,LH00995:25:23T55JLT4:8:2379:7820:18165	.	NO_LDAS	0.1052	GT	1.7056	AG	1.9656	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:104601991-chr3:155183570	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	31
UMAD1--GLCCI1	30	0	30.0	0.0	ONLY_REF_SPLICE	UMAD1^ENSG00000219545.11	chr7:7801743:+	GLCCI1^ENSG00000106415.13	chr7:8003908:+	LH00995:25:23T55JLT4:5:1181:41345:25620,LH00995:25:23T55JLT4:5:1278:13548:25704,LH00995:25:23T55JLT4:5:1294:11557:21864,LH00995:25:23T55JLT4:5:1296:34193:24218,LH00995:25:23T55JLT4:5:1370:49119:5036,LH00995:25:23T55JLT4:5:2468:7634:20813,LH00995:25:23T55JLT4:5:2473:21185:11271,LH00995:25:23T55JLT4:6:1168:4980:8623,LH00995:25:23T55JLT4:6:1207:2602:3999,LH00995:25:23T55JLT4:6:1217:10287:13639,LH00995:25:23T55JLT4:6:1231:7545:4853,LH00995:25:23T55JLT4:6:1332:5846:25760,LH00995:25:23T55JLT4:6:1396:28546:11271,LH00995:25:23T55JLT4:6:1450:45406:16343,LH00995:25:23T55JLT4:6:1485:22115:27483,LH00995:25:23T55JLT4:6:1490:20028:2681,LH00995:25:23T55JLT4:6:2295:1720:19286,LH00995:25:23T55JLT4:6:2386:18329:8286,LH00995:25:23T55JLT4:6:2434:28110:28198,LH00995:25:23T55JLT4:6:2459:20432:19020,LH00995:25:23T55JLT4:8:1177:19583:10402,LH00995:25:23T55JLT4:8:1227:8338:3368,LH00995:25:23T55JLT4:8:1289:28417:11467,LH00995:25:23T55JLT4:8:1374:51514:25942,LH00995:25:23T55JLT4:8:1412:10392:27133,LH00995:25:23T55JLT4:8:1436:24307:28590,LH00995:25:23T55JLT4:8:1484:32300:24499,LH00995:25:23T55JLT4:8:2144:19850:9800,LH00995:25:23T55JLT4:8:2345:20715:16876,LH00995:25:23T55JLT4:8:2404:32575:14970	.	YES_LDAS	0.1018	GT	1.9656	AG	1.7465	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]"	chr7:7801743-chr7:8003908	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	30
PTPRM--TTC39C	30	0	30.0	0.0	ONLY_REF_SPLICE	PTPRM^ENSG00000173482.17	chr18:7567891:+	TTC39C^ENSG00000168234.13	chr18:24064140:+	LH00995:25:23T55JLT4:2:1138:34557:6493,LH00995:25:23T55JLT4:5:1150:42121:4545,LH00995:25:23T55JLT4:5:1175:22544:17492,LH00995:25:23T55JLT4:5:1207:12221:29459,LH00995:25:23T55JLT4:5:1214:38246:9155,LH00995:25:23T55JLT4:5:2159:16331:27834,LH00995:25:23T55JLT4:5:2220:40123:18039,LH00995:25:23T55JLT4:5:2263:18305:22873,LH00995:25:23T55JLT4:5:2296:3540:21374,LH00995:25:23T55JLT4:5:2368:33198:9547,LH00995:25:23T55JLT4:5:2375:23159:5890,LH00995:25:23T55JLT4:5:2475:12237:16035,LH00995:25:23T55JLT4:6:1296:9753:14676,LH00995:25:23T55JLT4:6:1474:29283:22607,LH00995:25:23T55JLT4:6:2170:22293:21766,LH00995:25:23T55JLT4:6:2171:45940:1294,LH00995:25:23T55JLT4:6:2190:25626:13555,LH00995:25:23T55JLT4:6:2219:20505:28702,LH00995:25:23T55JLT4:6:2486:27050:8370,LH00995:25:23T55JLT4:8:1108:19348:8062,LH00995:25:23T55JLT4:8:1132:21015:7922,LH00995:25:23T55JLT4:8:1216:16646:5484,LH00995:25:23T55JLT4:8:1248:38505:4923,LH00995:25:23T55JLT4:8:1450:28951:25171,LH00995:25:23T55JLT4:8:1479:36280:26685,LH00995:25:23T55JLT4:8:2207:14429:15012,LH00995:25:23T55JLT4:8:2291:30407:28870,LH00995:25:23T55JLT4:8:2452:42267:21864,LH00995:25:23T55JLT4:8:2456:35779:15082,LH00995:25:23T55JLT4:8:2496:8313:5176	.	YES_LDAS	0.1018	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr18:15.59Mb]""]"	chr18:7567891-chr18:24064140	False			1		PASS	30
PDCD1LG2--DYNC2H1	30	0	30.0	0.0	ONLY_REF_SPLICE	PDCD1LG2^ENSG00000197646.8	chr9:5535050:+	DYNC2H1^ENSG00000187240.16	chr11:103114103:+	LH00995:25:23T55JLT4:2:1127:43295:15265,LH00995:25:23T55JLT4:5:1164:9470:16175,LH00995:25:23T55JLT4:5:1178:23620:20477,LH00995:25:23T55JLT4:5:1194:46943:2808,LH00995:25:23T55JLT4:5:1430:22948:27946,LH00995:25:23T55JLT4:5:1495:36434:15096,LH00995:25:23T55JLT4:5:2258:44435:20323,LH00995:25:23T55JLT4:5:2266:11493:2191,LH00995:25:23T55JLT4:5:2431:15344:19034,LH00995:25:23T55JLT4:6:1236:21427:28338,LH00995:25:23T55JLT4:6:1427:32850:29151,LH00995:25:23T55JLT4:6:2211:47315:8216,LH00995:25:23T55JLT4:6:2318:39225:27721,LH00995:25:23T55JLT4:6:2390:32591:6227,LH00995:25:23T55JLT4:6:2442:10983:17114,LH00995:25:23T55JLT4:8:1143:19380:5148,LH00995:25:23T55JLT4:8:1163:37065:12154,LH00995:25:23T55JLT4:8:1243:19469:7684,LH00995:25:23T55JLT4:8:1338:34832:5176,LH00995:25:23T55JLT4:8:1384:4196:27553,LH00995:25:23T55JLT4:8:1405:51166:10178,LH00995:25:23T55JLT4:8:1422:36806:25690,LH00995:25:23T55JLT4:8:1425:50074:4251,LH00995:25:23T55JLT4:8:2150:40673:17114,LH00995:25:23T55JLT4:8:2231:33053:3971,LH00995:25:23T55JLT4:8:2254:34266:25437,LH00995:25:23T55JLT4:8:2266:43521:12826,LH00995:25:23T55JLT4:8:2268:11517:7754,LH00995:25:23T55JLT4:8:2301:15457:11860,LH00995:25:23T55JLT4:8:2355:43513:8693	.	YES_LDAS	0.1018	GT	1.9219	AG	1.8323	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:5535050-chr11:103114103	False			1		PASS	30
TMEM123--DYNC2H1	28	1	28.0	1.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	DYNC2H1^ENSG00000187240.16	chr11:103280348:+	LH00995:25:23T55JLT4:5:1112:2060:6311,LH00995:25:23T55JLT4:5:1113:10821:22523,LH00995:25:23T55JLT4:5:1240:48504:6016,LH00995:25:23T55JLT4:5:1269:40164:24190,LH00995:25:23T55JLT4:5:1327:36928:6815,LH00995:25:23T55JLT4:5:2149:25505:6619,LH00995:25:23T55JLT4:5:2188:21087:19258,LH00995:25:23T55JLT4:5:2312:48513:22032,LH00995:25:23T55JLT4:5:2448:47008:28086,LH00995:25:23T55JLT4:6:1219:13839:6395,LH00995:25:23T55JLT4:6:1237:29485:20295,LH00995:25:23T55JLT4:6:1295:46757:22271,LH00995:25:23T55JLT4:6:1474:31378:21752,LH00995:25:23T55JLT4:6:2158:19097:27974,LH00995:25:23T55JLT4:6:2187:28975:17366,LH00995:25:23T55JLT4:6:2231:42332:14326,LH00995:25:23T55JLT4:6:2297:4511:17114,LH00995:25:23T55JLT4:6:2318:26864:16680,LH00995:25:23T55JLT4:6:2348:35132:4097,LH00995:25:23T55JLT4:6:2358:25173:17871,LH00995:25:23T55JLT4:6:2385:50964:19272,LH00995:25:23T55JLT4:8:1123:43812:17002,LH00995:25:23T55JLT4:8:1255:11339:29585,LH00995:25:23T55JLT4:8:1325:13993:29193,LH00995:25:23T55JLT4:8:1411:13224:12812,LH00995:25:23T55JLT4:8:2291:24121:4643,LH00995:25:23T55JLT4:8:2337:37267:20183,LH00995:25:23T55JLT4:8:2451:4074:28716	LH00995:25:23T55JLT4:6:2316:11533:17254	YES_LDAS	0.0984	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr11:0.64Mb]""]"	chr11:102448812-chr11:103280348	False			1		PASS	29
LILRB1--AC245884.12	26	0	23.64	0.0	ONLY_REF_SPLICE	LILRB1^ENSG00000104972.15	chr19:54633318:+	AC245884.12^ENSG00000276758.1	chr19:54296252:-	LH00995:25:23T55JLT4:5:1135:4891:9449,LH00995:25:23T55JLT4:5:1225:46636:5050,LH00995:25:23T55JLT4:5:1405:10870:27623,LH00995:25:23T55JLT4:5:1449:14745:18641,LH00995:25:23T55JLT4:5:1460:33101:12518,LH00995:25:23T55JLT4:5:2145:42413:29347,LH00995:25:23T55JLT4:5:2353:51522:29683,LH00995:25:23T55JLT4:6:1103:46984:22859,LH00995:25:23T55JLT4:6:1111:38780:8146,LH00995:25:23T55JLT4:6:1185:31677:10052,LH00995:25:23T55JLT4:6:1231:4349:12630,LH00995:25:23T55JLT4:6:1452:12957:11313,LH00995:25:23T55JLT4:6:2171:51821:8034,LH00995:25:23T55JLT4:6:2220:2836:27273,LH00995:25:23T55JLT4:6:2324:3055:10052,LH00995:25:23T55JLT4:6:2345:36968:19692,LH00995:25:23T55JLT4:6:2381:10215:29347,LH00995:25:23T55JLT4:8:1126:48335:10570,LH00995:25:23T55JLT4:8:1196:30901:26895,LH00995:25:23T55JLT4:8:1196:5482:28352,LH00995:25:23T55JLT4:8:1216:10182:18081,LH00995:25:23T55JLT4:8:1269:22398:25059,LH00995:25:23T55JLT4:8:1395:42324:27651,LH00995:25:23T55JLT4:8:2152:50907:22060,LH00995:25:23T55JLT4:8:2361:37729:6605,LH00995:25:23T55JLT4:8:2386:19405:28926	.	YES_LDAS	0.0802	GT	1.9329	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr19:0.32Mb]""]"	chr19:54633318-chr19:54296252	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	26
KCNH5--NCOA3	25	0	24.96	0.0	INCL_NON_REF_SPLICE	KCNH5^ENSG00000140015.20	chr14:62950140:-	NCOA3^ENSG00000124151.19	chr20:47651081:+	LH00995:25:23T55JLT4:5:1118:43367:10626,LH00995:25:23T55JLT4:5:1129:16371:19889,LH00995:25:23T55JLT4:5:1152:6881:9982,LH00995:25:23T55JLT4:5:1223:8451:15811,LH00995:25:23T55JLT4:5:1339:50211:27049,LH00995:25:23T55JLT4:5:2250:41280:19398,LH00995:25:23T55JLT4:5:2274:8928:19889,LH00995:25:23T55JLT4:5:2457:28174:24555,LH00995:25:23T55JLT4:5:2493:36491:27693,LH00995:25:23T55JLT4:5:2494:5943:15615,LH00995:25:23T55JLT4:6:1111:33934:18754,LH00995:25:23T55JLT4:6:1209:50842:8441,LH00995:25:23T55JLT4:6:1227:46482:17731,LH00995:25:23T55JLT4:6:1290:39897:16582,LH00995:25:23T55JLT4:6:1313:21629:3887,LH00995:25:23T55JLT4:6:1418:30278:27245,LH00995:25:23T55JLT4:6:1450:35552:27974,LH00995:25:23T55JLT4:6:2144:19567:23938,LH00995:25:23T55JLT4:6:2310:49904:28422,LH00995:25:23T55JLT4:6:2452:32632:15208,LH00995:25:23T55JLT4:8:1165:26775:13891,LH00995:25:23T55JLT4:8:1168:11436:15489,LH00995:25:23T55JLT4:8:1393:37672:7151,LH00995:25:23T55JLT4:8:2234:14850:4531,LH00995:25:23T55JLT4:8:2340:12674:26853	.	NO_LDAS	0.0847	GT	1.7819	AG	1.5656	"[""INTERCHROMOSOMAL[chr14--chr20]""]"	chr14:62950140-chr20:47651081	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	25
SH3BP5--AC002074.1	24	0	24.0	0.0	ONLY_REF_SPLICE	SH3BP5^ENSG00000131370.16	chr3:15304103:-	AC002074.1^ENSG00000285090.1	chr7:94279390:-	LH00995:25:23T55JLT4:5:1109:10287:2289,LH00995:25:23T55JLT4:5:1124:5037:11916,LH00995:25:23T55JLT4:5:1201:28579:13625,LH00995:25:23T55JLT4:5:1345:4414:5204,LH00995:25:23T55JLT4:5:1383:28360:11341,LH00995:25:23T55JLT4:5:1385:15764:6955,LH00995:25:23T55JLT4:5:1387:41134:8300,LH00995:25:23T55JLT4:5:2467:10562:24176,LH00995:25:23T55JLT4:5:2478:47259:28660,LH00995:25:23T55JLT4:6:1124:47129:1308,LH00995:25:23T55JLT4:6:1151:39897:21066,LH00995:25:23T55JLT4:6:1195:20117:27497,LH00995:25:23T55JLT4:6:1286:16986:20841,LH00995:25:23T55JLT4:6:1431:19389:29711,LH00995:25:23T55JLT4:6:2393:28166:22131,LH00995:25:23T55JLT4:6:2433:51846:7095,LH00995:25:23T55JLT4:8:1194:12536:21682,LH00995:25:23T55JLT4:8:1298:47647:4391,LH00995:25:23T55JLT4:8:1405:25545:25550,LH00995:25:23T55JLT4:8:1461:10344:12588,LH00995:25:23T55JLT4:8:1497:2942:24513,LH00995:25:23T55JLT4:8:2268:32583:28324,LH00995:25:23T55JLT4:8:2290:23814:5316,LH00995:25:23T55JLT4:8:2423:25674:22915	.	YES_LDAS	0.0815	GT	1.5546	AG	1.5546	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:15304103-chr7:94279390	False			1		PASS	24
SAMD5--SASH1	23	0	23.0	0.0	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	SASH1^ENSG00000111961.18	chr6:148390134:+	LH00995:25:23T55JLT4:2:1111:18385:28506,LH00995:25:23T55JLT4:2:1151:9972:3564,LH00995:25:23T55JLT4:5:1175:35391:14914,LH00995:25:23T55JLT4:5:1367:3435:3032,LH00995:25:23T55JLT4:5:1390:4082:4881,LH00995:25:23T55JLT4:5:1448:22026:10851,LH00995:25:23T55JLT4:5:2106:15522:6227,LH00995:25:23T55JLT4:5:2233:6906:4111,LH00995:25:23T55JLT4:5:2325:11517:5764,LH00995:25:23T55JLT4:5:2328:38521:21430,LH00995:25:23T55JLT4:6:1160:32850:16231,LH00995:25:23T55JLT4:6:1215:25691:8342,LH00995:25:23T55JLT4:6:1350:7674:21332,LH00995:25:23T55JLT4:6:1369:7982:22004,LH00995:25:23T55JLT4:6:1375:29242:20771,LH00995:25:23T55JLT4:6:1397:13022:28772,LH00995:25:23T55JLT4:6:1440:52048:15685,LH00995:25:23T55JLT4:6:2125:44637:28380,LH00995:25:23T55JLT4:6:2186:27835:11271,LH00995:25:23T55JLT4:6:2388:17471:2625,LH00995:25:23T55JLT4:8:2177:35253:4727,LH00995:25:23T55JLT4:8:2255:44443:6913,LH00995:25:23T55JLT4:8:2413:9066:4517	.	YES_LDAS	0.0781	GT	1.8295	AG	1.9219	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]"	chr6:147509387-chr6:148390134	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	23
APLP2--CERS3	23	0	23.0	0.0	INCL_NON_REF_SPLICE	APLP2^ENSG00000084234.18	chr11:130121799:+	CERS3^ENSG00000154227.14	chr15:100402823:-	LH00995:25:23T55JLT4:5:1350:16007:7123,LH00995:25:23T55JLT4:5:1471:2100:3382,LH00995:25:23T55JLT4:5:2247:15829:9001,LH00995:25:23T55JLT4:6:1203:10619:17072,LH00995:25:23T55JLT4:6:1290:2294:23139,LH00995:25:23T55JLT4:6:1313:23393:10725,LH00995:25:23T55JLT4:6:2130:27568:20281,LH00995:25:23T55JLT4:6:2147:24380:1448,LH00995:25:23T55JLT4:6:2259:46045:1589,LH00995:25:23T55JLT4:6:2445:28158:5274,LH00995:25:23T55JLT4:8:1158:42453:11958,LH00995:25:23T55JLT4:8:1158:42461:11972,LH00995:25:23T55JLT4:8:1269:21031:4951,LH00995:25:23T55JLT4:8:1380:19801:5036,LH00995:25:23T55JLT4:8:1396:37526:22285,LH00995:25:23T55JLT4:8:1412:28765:29501,LH00995:25:23T55JLT4:8:1424:25917:10528,LH00995:25:23T55JLT4:8:1493:35876:20996,LH00995:25:23T55JLT4:8:2158:45487:24358,LH00995:25:23T55JLT4:8:2430:46717:24947,LH00995:25:23T55JLT4:8:2433:48189:7376,LH00995:25:23T55JLT4:8:2460:47882:16652,LH00995:25:23T55JLT4:8:2486:24574:21906	.	NO_LDAS	0.0781	GT	1.7819	AG	0.9968	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:130121799-chr15:100402823	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	23
TLK2P1--AC110079.1	21	0	19.54	0.0	INCL_NON_REF_SPLICE	TLK2P1^ENSG00000226049.3	chr17:34039043:-	AC110079.1^ENSG00000260404.3	chr4:118595912:+	LH00995:25:23T55JLT4:2:1111:49022:14031,LH00995:25:23T55JLT4:2:1140:28166:28604,LH00995:25:23T55JLT4:5:1201:6016:2485,LH00995:25:23T55JLT4:5:1436:50624:3382,LH00995:25:23T55JLT4:5:1463:17900:1098,LH00995:25:23T55JLT4:5:1467:40245:24527,LH00995:25:23T55JLT4:5:2212:9980:24373,LH00995:25:23T55JLT4:5:2484:14389:26236,LH00995:25:23T55JLT4:6:1206:6250:4657,LH00995:25:23T55JLT4:6:1247:46142:3887,LH00995:25:23T55JLT4:6:1403:19914:15965,LH00995:25:23T55JLT4:6:2167:21735:6086,LH00995:25:23T55JLT4:6:2211:35941:17268,LH00995:25:23T55JLT4:6:2231:41086:29599,LH00995:25:23T55JLT4:6:2429:35617:6983,LH00995:25:23T55JLT4:8:1247:8896:27091,LH00995:25:23T55JLT4:8:1458:18127:22341,LH00995:25:23T55JLT4:8:2220:10716:8076,LH00995:25:23T55JLT4:8:2323:37826:25157,LH00995:25:23T55JLT4:8:2414:7512:14802,LH00995:25:23T55JLT4:8:2462:9050:2724	.	YES_LDAS	0.0663	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr4]""]"	chr17:34039043-chr4:118595912	False			0	Does not meet inclusion criteria	FAIL	21
LILRB1--LILRA5	21	0	20.95	0.0	ONLY_REF_SPLICE	LILRB1^ENSG00000104972.15	chr19:54631107:+	LILRA5^ENSG00000187116.14	chr19:54312370:-	LH00995:25:23T55JLT4:2:1142:14996:8090,LH00995:25:23T55JLT4:5:1246:24906:22032,LH00995:25:23T55JLT4:5:1256:50867:29613,LH00995:25:23T55JLT4:5:1348:15344:25115,LH00995:25:23T55JLT4:5:1383:18062:9253,LH00995:25:23T55JLT4:5:2105:44751:11509,LH00995:25:23T55JLT4:5:2109:11962:3284,LH00995:25:23T55JLT4:5:2456:23539:4279,LH00995:25:23T55JLT4:6:1368:30075:28044,LH00995:25:23T55JLT4:6:1458:2100:29137,LH00995:25:23T55JLT4:6:2321:5005:10682,LH00995:25:23T55JLT4:6:2353:26006:13793,LH00995:25:23T55JLT4:6:2431:50284:18151,LH00995:25:23T55JLT4:8:1170:33724:29375,LH00995:25:23T55JLT4:8:1462:44265:29473,LH00995:25:23T55JLT4:8:1478:19745:24695,LH00995:25:23T55JLT4:8:1492:44314:6353,LH00995:25:23T55JLT4:8:2105:2489:29669,LH00995:25:23T55JLT4:8:2254:19049:1995,LH00995:25:23T55JLT4:8:2304:26969:22887,LH00995:25:23T55JLT4:8:2419:21994:12700	.	YES_LDAS	0.0711	GT	1.7819	AG	1.7465	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]"	chr19:54631107-chr19:54312370	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	21
CPSF6--GRM8	21	0	21.0	0.0	INCL_NON_REF_SPLICE	CPSF6^ENSG00000111605.18	chr12:69262562:+	GRM8^ENSG00000179603.18	chr7:126445313:-	LH00995:25:23T55JLT4:5:1110:24024:19552,LH00995:25:23T55JLT4:5:1140:5417:10416,LH00995:25:23T55JLT4:5:1253:31904:15601,LH00995:25:23T55JLT4:5:1363:20497:20281,LH00995:25:23T55JLT4:5:2141:51668:4153,LH00995:25:23T55JLT4:5:2196:40997:27820,LH00995:25:23T55JLT4:5:2240:15012:25942,LH00995:25:23T55JLT4:5:2280:7488:13723,LH00995:25:23T55JLT4:5:2488:45479:6661,LH00995:25:23T55JLT4:5:2495:43804:17913,LH00995:25:23T55JLT4:6:1219:29064:26012,LH00995:25:23T55JLT4:6:2123:32373:18768,LH00995:25:23T55JLT4:6:2206:22358:20982,LH00995:25:23T55JLT4:6:2309:38934:10290,LH00995:25:23T55JLT4:6:2339:23765:26839,LH00995:25:23T55JLT4:6:2397:24364:2738,LH00995:25:23T55JLT4:6:2441:49807:13485,LH00995:25:23T55JLT4:8:1215:41660:21710,LH00995:25:23T55JLT4:8:2104:18434:10010,LH00995:25:23T55JLT4:8:2182:12116:14620,LH00995:25:23T55JLT4:8:2445:15635:23714	.	NO_LDAS	0.0713	GT	1.9899	AG	1.8256	"[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr12--chr7]""]"	chr12:69262562-chr7:126445313	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	21
SRGAP2C--FCGR1B	20	0	20.0	0.0	ONLY_REF_SPLICE	SRGAP2C^ENSG00000171943.12	chr1:121324640:+	FCGR1B^ENSG00000198019.13	chr1:121092996:+	LH00995:25:23T55JLT4:2:1162:41976:18922,LH00995:25:23T55JLT4:5:1105:47995:21388,LH00995:25:23T55JLT4:5:1179:27430:9281,LH00995:25:23T55JLT4:5:1339:23353:16259,LH00995:25:23T55JLT4:5:2144:12318:9505,LH00995:25:23T55JLT4:5:2273:32583:4643,LH00995:25:23T55JLT4:5:2293:23086:25886,LH00995:25:23T55JLT4:5:2297:7189:15699,LH00995:25:23T55JLT4:5:2427:19397:24513,LH00995:25:23T55JLT4:5:2465:33384:1911,LH00995:25:23T55JLT4:6:1119:30504:10178,LH00995:25:23T55JLT4:6:1190:24218:14312,LH00995:25:23T55JLT4:6:1468:25529:11846,LH00995:25:23T55JLT4:6:2476:9195:22817,LH00995:25:23T55JLT4:8:1307:38538:16694,LH00995:25:23T55JLT4:8:1453:24679:6787,LH00995:25:23T55JLT4:8:2177:49548:14130,LH00995:25:23T55JLT4:8:2238:2262:2401,LH00995:25:23T55JLT4:8:2256:47064:26979,LH00995:25:23T55JLT4:8:2480:12973:9491	.	YES_LDAS	0.0679	GT	1.7968	AG	1.9329	"[""INTRACHROMOSOMAL[chr1:0.09Mb]"",""LOCAL_REARRANGEMENT:+:[87650]""]"	chr1:121324640-chr1:121092996	False			1		PASS	20
EWSR1--IGH@-ext	20	0	20.0	0.0	INCL_NON_REF_SPLICE	EWSR1^ENSG00000182944.18	chr22:29287133:+	IGH@-ext^IGH.g@-ext	chr14:106679374:-	LH00995:25:23T55JLT4:2:1107:46272:10248,LH00995:25:23T55JLT4:5:1142:14672:19496,LH00995:25:23T55JLT4:5:1180:23935:2780,LH00995:25:23T55JLT4:5:1261:38934:3480,LH00995:25:23T55JLT4:5:1292:4972:23966,LH00995:25:23T55JLT4:5:1405:16565:22131,LH00995:25:23T55JLT4:5:1456:49629:13793,LH00995:25:23T55JLT4:5:2123:10053:9674,LH00995:25:23T55JLT4:5:2168:8184:3494,LH00995:25:23T55JLT4:6:1152:10360:20715,LH00995:25:23T55JLT4:6:1218:7569:10108,LH00995:25:23T55JLT4:6:1405:51959:23266,LH00995:25:23T55JLT4:6:1461:40730:28254,LH00995:25:23T55JLT4:6:1487:41385:20701,LH00995:25:23T55JLT4:6:2387:31669:18165,LH00995:25:23T55JLT4:8:1283:31459:15699,LH00995:25:23T55JLT4:8:1382:36070:11832,LH00995:25:23T55JLT4:8:2101:37235:1518,LH00995:25:23T55JLT4:8:2321:20683:1603,LH00995:25:23T55JLT4:8:2425:23320:9618	.	NO_LDAS	0.0679	AG	1.8062	CT	1.7465	"[""INTERCHROMOSOMAL[chr22--chr14]""]"	chr22:29287133-chr14:106679374	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	20
BPTF--DCXR	20	0	20.0	0.0	INCL_NON_REF_SPLICE	BPTF^ENSG00000171634.18	chr17:67945620:+	DCXR^ENSG00000169738.8	chr17:82037080:-	LH00995:25:23T55JLT4:2:1149:24032:26769,LH00995:25:23T55JLT4:5:1406:51101:18221,LH00995:25:23T55JLT4:5:1437:35747:25507,LH00995:25:23T55JLT4:5:2262:7658:1911,LH00995:25:23T55JLT4:5:2291:23498:28086,LH00995:25:23T55JLT4:5:2314:40609:25886,LH00995:25:23T55JLT4:5:2372:47202:25115,LH00995:25:23T55JLT4:5:2386:31880:26853,LH00995:25:23T55JLT4:5:2490:37017:18627,LH00995:25:23T55JLT4:6:1169:25723:3718,LH00995:25:23T55JLT4:6:2271:51660:3578,LH00995:25:23T55JLT4:6:2287:21605:23882,LH00995:25:23T55JLT4:6:2349:3362:5540,LH00995:25:23T55JLT4:6:2390:45341:18221,LH00995:25:23T55JLT4:6:2482:29364:3746,LH00995:25:23T55JLT4:6:2494:39735:11565,LH00995:25:23T55JLT4:8:1446:43011:19146,LH00995:25:23T55JLT4:8:1468:34889:19875,LH00995:25:23T55JLT4:8:2204:12965:28422,LH00995:25:23T55JLT4:8:2420:49467:5190	.	NO_LDAS	0.0679	GT	1.5628	AG	1.6049	"[""INTRACHROMOSOMAL[chr17:14.05Mb]""]"	chr17:67945620-chr17:82037080	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	20
AC008740.1--CRYM-AS1	20	0	20.0	0.0	INCL_NON_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21338921:+	LH00995:25:23T55JLT4:2:1105:24857:5862,LH00995:25:23T55JLT4:5:1173:21743:4923,LH00995:25:23T55JLT4:5:1377:7844:15461,LH00995:25:23T55JLT4:5:1489:10587:5218,LH00995:25:23T55JLT4:5:2158:45584:29319,LH00995:25:23T55JLT4:5:2183:12399:14746,LH00995:25:23T55JLT4:5:2439:28215:9744,LH00995:25:23T55JLT4:5:2442:1445:9533,LH00995:25:23T55JLT4:5:2462:39096:19286,LH00995:25:23T55JLT4:5:2498:16654:4321,LH00995:25:23T55JLT4:6:1157:3929:4111,LH00995:25:23T55JLT4:6:1219:8168:24260,LH00995:25:23T55JLT4:6:1264:46264:6002,LH00995:25:23T55JLT4:6:1281:20869:18627,LH00995:25:23T55JLT4:6:1341:3734:12658,LH00995:25:23T55JLT4:6:2278:14154:9099,LH00995:25:23T55JLT4:8:1165:20521:13149,LH00995:25:23T55JLT4:8:2191:50729:2611,LH00995:25:23T55JLT4:8:2365:28344:1448,LH00995:25:23T55JLT4:8:2491:2036:22803	.	YES_LDAS	0.0679	GT	1.7232	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"	chr16:21352138-chr16:21338921	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	20
TLK2--AC240565.1	19	0	5.41	0.0	ONLY_REF_SPLICE	TLK2^ENSG00000146872.18	chr17:62560126:+	AC240565.1^ENSG00000280136.2	chr17:106864:-	LH00995:25:23T55JLT4:5:1397:37162:19188,LH00995:25:23T55JLT4:5:2120:34533:2191,LH00995:25:23T55JLT4:5:2137:1930:12588,LH00995:25:23T55JLT4:6:1176:29760:9337,LH00995:25:23T55JLT4:6:1216:50632:26320,LH00995:25:23T55JLT4:6:1247:46142:3887,LH00995:25:23T55JLT4:6:1264:44654:23280,LH00995:25:23T55JLT4:6:1346:1898:21584,LH00995:25:23T55JLT4:6:1473:24817:26671,LH00995:25:23T55JLT4:6:2196:28053:5680,LH00995:25:23T55JLT4:6:2231:41086:29599,LH00995:25:23T55JLT4:6:2427:34638:22607,LH00995:25:23T55JLT4:6:2448:13151:20533,LH00995:25:23T55JLT4:8:1172:30982:25550,LH00995:25:23T55JLT4:8:1296:44977:20309,LH00995:25:23T55JLT4:8:1338:52129:15349,LH00995:25:23T55JLT4:8:2277:26993:20351,LH00995:25:23T55JLT4:8:2323:37826:25157,LH00995:25:23T55JLT4:8:2337:20529:3102	.	YES_LDAS	0.0184	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr17:62.34Mb]""]"	chr17:62560126-chr17:106864	False			1		PASS	19
FLG-AS1--ARHGAP32	19	0	19.0	0.0	ONLY_REF_SPLICE	FLG-AS1^ENSG00000237975.7	chr1:152251758:+	ARHGAP32^ENSG00000134909.18	chr11:128998468:-	LH00995:25:23T55JLT4:2:1122:14446:3410,LH00995:25:23T55JLT4:2:1129:7189:22481,LH00995:25:23T55JLT4:5:1258:27195:14256,LH00995:25:23T55JLT4:5:1395:6129:11089,LH00995:25:23T55JLT4:5:2178:36111:18067,LH00995:25:23T55JLT4:5:2383:3168:3915,LH00995:25:23T55JLT4:6:1260:38222:1182,LH00995:25:23T55JLT4:6:1417:4964:3466,LH00995:25:23T55JLT4:6:1417:4988:3452,LH00995:25:23T55JLT4:6:1451:35512:9183,LH00995:25:23T55JLT4:6:2127:46830:28534,LH00995:25:23T55JLT4:6:2146:39201:17198,LH00995:25:23T55JLT4:6:2430:15158:22747,LH00995:25:23T55JLT4:8:1330:9082:16428,LH00995:25:23T55JLT4:8:1351:23336:13905,LH00995:25:23T55JLT4:8:1405:19251:28212,LH00995:25:23T55JLT4:8:1443:8394:15208,LH00995:25:23T55JLT4:8:2197:33150:23700,LH00995:25:23T55JLT4:8:2345:40261:7348	.	YES_LDAS	0.0645	GT	1.8256	AG	1.9219	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:152251758-chr11:128998468	False			1		PASS	19
TRIM58--OR2W3	18	0	18.0	0.0	INCL_NON_REF_SPLICE	TRIM58^ENSG00000162722.9	chr1:247868063:+	OR2W3^ENSG00000238243.3	chr1:247895557:+	LH00995:25:23T55JLT4:2:1142:39775:14606,LH00995:25:23T55JLT4:5:1131:32761:11621,LH00995:25:23T55JLT4:5:1139:33109:26600,LH00995:25:23T55JLT4:5:2116:34881:2653,LH00995:25:23T55JLT4:5:2133:23078:29123,LH00995:25:23T55JLT4:5:2298:34412:8847,LH00995:25:23T55JLT4:5:2339:17253:11299,LH00995:25:23T55JLT4:5:2355:2125:17577,LH00995:25:23T55JLT4:5:2483:6946:23686,LH00995:25:23T55JLT4:6:1205:46789:9688,LH00995:25:23T55JLT4:6:1365:46142:25634,LH00995:25:23T55JLT4:6:2305:23531:5694,LH00995:25:23T55JLT4:8:1356:39581:20407,LH00995:25:23T55JLT4:8:1416:5199:17885,LH00995:25:23T55JLT4:8:1486:28959:10052,LH00995:25:23T55JLT4:8:2173:47307:19468,LH00995:25:23T55JLT4:8:2188:10910:1406,LH00995:25:23T55JLT4:8:2415:40706:12995	.	YES_LDAS	0.0611	GT	1.8892	AG	1.6729	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[15449]""]"	chr1:247868063-chr1:247895557	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	18
TMEM123--PDGFD	18	0	18.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	PDGFD^ENSG00000170962.13	chr11:104000237:-	LH00995:25:23T55JLT4:5:1150:10392:2583,LH00995:25:23T55JLT4:5:1212:42186:10234,LH00995:25:23T55JLT4:5:1368:45446:13891,LH00995:25:23T55JLT4:5:2204:10304:28128,LH00995:25:23T55JLT4:5:2446:40317:20337,LH00995:25:23T55JLT4:6:1104:35221:21514,LH00995:25:23T55JLT4:6:1154:27293:24288,LH00995:25:23T55JLT4:6:1211:27260:19889,LH00995:25:23T55JLT4:6:2276:22835:4153,LH00995:25:23T55JLT4:6:2301:16678:27623,LH00995:25:23T55JLT4:6:2329:22317:8076,LH00995:25:23T55JLT4:6:2412:27559:20575,LH00995:25:23T55JLT4:6:2435:9931:16722,LH00995:25:23T55JLT4:8:1218:9583:11187,LH00995:25:23T55JLT4:8:1375:22293:1280,LH00995:25:23T55JLT4:8:1379:27147:26558,LH00995:25:23T55JLT4:8:2179:11493:10598,LH00995:25:23T55JLT4:8:2341:37413:29515	.	YES_LDAS	0.0611	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr11:1.44Mb]""]"	chr11:102448812-chr11:104000237	False			1		PASS	18
RPS3AP11--SEPTIN7	18	0	6.0	0.0	INCL_NON_REF_SPLICE	RPS3AP11^ENSG00000230116.1	chr1:42491744:+	SEPTIN7^ENSG00000122545.20	chr7:35832798:+	LH00995:25:23T55JLT4:2:1141:51643:2205,LH00995:25:23T55JLT4:5:1388:36782:7348,LH00995:25:23T55JLT4:5:2104:15352:23784,LH00995:25:23T55JLT4:5:2287:46474:28478,LH00995:25:23T55JLT4:5:2337:16662:8286,LH00995:25:23T55JLT4:6:1239:12577:20547,LH00995:25:23T55JLT4:6:1389:37963:28114,LH00995:25:23T55JLT4:6:2162:9543:12266,LH00995:25:23T55JLT4:6:2183:10603:3312,LH00995:25:23T55JLT4:6:2314:23887:8497,LH00995:25:23T55JLT4:6:2354:16719:26572,LH00995:25:23T55JLT4:6:2408:25262:4994,LH00995:25:23T55JLT4:6:2425:30019:24387,LH00995:25:23T55JLT4:6:2466:47315:23490,LH00995:25:23T55JLT4:8:1114:16808:23055,LH00995:25:23T55JLT4:8:1303:43707:3396,LH00995:25:23T55JLT4:8:1426:15554:13429,LH00995:25:23T55JLT4:8:2376:32446:3088	.	NO_LDAS	0.0204	GT	1.9329	AG	1.7968	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:42491744-chr7:35832798	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	18
BIRC3--PDGFD	18	0	18.0	0.0	ONLY_REF_SPLICE	BIRC3^ENSG00000023445.16	chr11:102317571:+	PDGFD^ENSG00000170962.13	chr11:104000255:-	LH00995:25:23T55JLT4:2:1116:29728:5666,LH00995:25:23T55JLT4:5:1195:49718:7586,LH00995:25:23T55JLT4:5:1420:27657:17549,LH00995:25:23T55JLT4:5:2178:13499:9421,LH00995:25:23T55JLT4:5:2193:6695:2345,LH00995:25:23T55JLT4:5:2435:8993:18768,LH00995:25:23T55JLT4:5:2440:9899:13807,LH00995:25:23T55JLT4:6:1235:47226:15236,LH00995:25:23T55JLT4:6:2208:2529:29291,LH00995:25:23T55JLT4:6:2427:37292:1084,LH00995:25:23T55JLT4:8:1227:44395:1140,LH00995:25:23T55JLT4:8:1303:31095:18684,LH00995:25:23T55JLT4:8:1432:29817:5596,LH00995:25:23T55JLT4:8:1435:43052:4195,LH00995:25:23T55JLT4:8:1496:25674:6997,LH00995:25:23T55JLT4:8:2138:28255:12084,LH00995:25:23T55JLT4:8:2322:30868:1897,LH00995:25:23T55JLT4:8:2379:5450:14284	.	YES_LDAS	0.0611	GT	1.8323	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:1.57Mb]""]"	chr11:102317571-chr11:104000255	False			1		PASS	18
AC239859.5--AC013734.1	18	0	3.51	0.0	INCL_NON_REF_SPLICE	AC239859.5^ENSG00000277702.1	chr1:143419625:-	AC013734.1^ENSG00000277146.1	chrY:26453985:+	LH00995:25:23T55JLT4:2:1118:48869:1434,LH00995:25:23T55JLT4:5:1113:40746:14550,LH00995:25:23T55JLT4:5:1190:25335:11930,LH00995:25:23T55JLT4:5:1418:52032:21682,LH00995:25:23T55JLT4:5:2126:48852:19678,LH00995:25:23T55JLT4:5:2154:17641:23798,LH00995:25:23T55JLT4:5:2205:8200:5680,LH00995:25:23T55JLT4:5:2464:33748:7025,LH00995:25:23T55JLT4:6:1353:27988:18235,LH00995:25:23T55JLT4:6:2395:27470:29445,LH00995:25:23T55JLT4:6:2416:24777:23602,LH00995:25:23T55JLT4:8:1169:44993:12546,LH00995:25:23T55JLT4:8:1357:44735:16414,LH00995:25:23T55JLT4:8:1429:29088:15012,LH00995:25:23T55JLT4:8:1429:49710:11832,LH00995:25:23T55JLT4:8:2127:36758:24681,LH00995:25:23T55JLT4:8:2131:39961:26867,LH00995:25:23T55JLT4:8:2188:22600:27231	.	YES_LDAS	0.0119	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chrY]""]"	chr1:143419625-chrY:26453985	False			0	Does not meet inclusion criteria	FAIL	18
YAF2--RYBP	17	0	17.0	0.0	INCL_NON_REF_SPLICE	YAF2^ENSG00000015153.15	chr12:42238155:-	RYBP^ENSG00000163602.11	chr3:72446621:-	LH00995:25:23T55JLT4:5:1170:6647:2738,LH00995:25:23T55JLT4:5:1173:51320:7530,LH00995:25:23T55JLT4:5:1201:38869:24667,LH00995:25:23T55JLT4:5:1425:43068:3494,LH00995:25:23T55JLT4:5:2117:42032:28240,LH00995:25:23T55JLT4:6:1367:38619:9351,LH00995:25:23T55JLT4:6:1387:47509:24639,LH00995:25:23T55JLT4:6:1427:26306:15124,LH00995:25:23T55JLT4:6:2177:20092:19552,LH00995:25:23T55JLT4:6:2181:48181:25129,LH00995:25:23T55JLT4:6:2394:15611:10108,LH00995:25:23T55JLT4:6:2411:44476:6157,LH00995:25:23T55JLT4:8:1280:21921:7165,LH00995:25:23T55JLT4:8:2238:2319:19258,LH00995:25:23T55JLT4:8:2380:12569:3242,LH00995:25:23T55JLT4:8:2390:1380:16820,LH00995:25:23T55JLT4:8:2392:41628:2822	.	YES_LDAS	0.0577	GT	1.5656	AG	1.4566	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:42238155-chr3:72446621	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	17
PDCD1LG2--DYNC2H1	17	0	17.0	0.0	ONLY_REF_SPLICE	PDCD1LG2^ENSG00000197646.8	chr9:5535050:+	DYNC2H1^ENSG00000187240.16	chr11:103113537:+	LH00995:25:23T55JLT4:5:1129:8208:6591,LH00995:25:23T55JLT4:5:1350:30262:3480,LH00995:25:23T55JLT4:5:2304:32203:5638,LH00995:25:23T55JLT4:6:1292:52153:4769,LH00995:25:23T55JLT4:6:1337:31580:3634,LH00995:25:23T55JLT4:6:2293:6469:3270,LH00995:25:23T55JLT4:6:2310:18563:16960,LH00995:25:23T55JLT4:6:2473:1615:24597,LH00995:25:23T55JLT4:8:1133:19033:29431,LH00995:25:23T55JLT4:8:1293:30156:23420,LH00995:25:23T55JLT4:8:1332:3484:19090,LH00995:25:23T55JLT4:8:1333:13345:19552,LH00995:25:23T55JLT4:8:2140:44953:12588,LH00995:25:23T55JLT4:8:2165:20545:10949,LH00995:25:23T55JLT4:8:2216:37033:6605,LH00995:25:23T55JLT4:8:2470:23021:19945,LH00995:25:23T55JLT4:8:2470:23037:19945	.	YES_LDAS	0.0577	GT	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:5535050-chr11:103113537	False			1		PASS	17
BOLA2B--SMG1P2	17	0	17.0	0.0	INCL_NON_REF_SPLICE	BOLA2B^ENSG00000169627.9	chr16:30193358:-	SMG1P2^ENSG00000205534.6	chr16:29548658:-	LH00995:25:23T55JLT4:2:1106:36847:5134,LH00995:25:23T55JLT4:2:1123:42777:8707,LH00995:25:23T55JLT4:5:1129:38877:9912,LH00995:25:23T55JLT4:5:1175:23417:20351,LH00995:25:23T55JLT4:5:1465:4924:25760,LH00995:25:23T55JLT4:5:2176:8346:20141,LH00995:25:23T55JLT4:6:1206:13127:15811,LH00995:25:23T55JLT4:6:1206:15983:12462,LH00995:25:23T55JLT4:6:2195:46361:9926,LH00995:25:23T55JLT4:6:2396:11145:5092,LH00995:25:23T55JLT4:6:2428:45560:27343,LH00995:25:23T55JLT4:8:2139:9592:26362,LH00995:25:23T55JLT4:8:2153:14494:7334,LH00995:25:23T55JLT4:8:2164:9600:16456,LH00995:25:23T55JLT4:8:2184:51457:28618,LH00995:25:23T55JLT4:8:2318:33247:3634,LH00995:25:23T55JLT4:8:2374:48246:27932	.	YES_LDAS	0.0577	GT	1.9329	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]"	chr16:30193358-chr16:29548658	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	17
AL033504.1--SASH1	17	0	17.0	0.0	ONLY_REF_SPLICE	AL033504.1^ENSG00000227681.5	chr6:147947519:+	SASH1^ENSG00000111961.18	chr6:148390134:+	LH00995:25:23T55JLT4:2:1130:15077:11733,LH00995:25:23T55JLT4:5:1178:9778:2443,LH00995:25:23T55JLT4:5:1296:35010:14956,LH00995:25:23T55JLT4:5:1330:27220:24302,LH00995:25:23T55JLT4:5:1473:36280:17268,LH00995:25:23T55JLT4:5:2202:16436:2149,LH00995:25:23T55JLT4:5:2350:24688:19580,LH00995:25:23T55JLT4:5:2363:47105:5694,LH00995:25:23T55JLT4:6:1288:32883:3116,LH00995:25:23T55JLT4:6:2169:7699:9071,LH00995:25:23T55JLT4:6:2382:34290:23798,LH00995:25:23T55JLT4:8:1184:18224:15531,LH00995:25:23T55JLT4:8:1255:4948:15180,LH00995:25:23T55JLT4:8:1258:6792:27287,LH00995:25:23T55JLT4:8:1280:14373:6591,LH00995:25:23T55JLT4:8:2418:22341:7726,LH00995:25:23T55JLT4:8:2471:26055:6114	.	YES_LDAS	0.0577	GT	1.5329	AG	1.9219	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.32Mb]""]"	chr6:147947519-chr6:148390134	False			1		PASS	17
AC104123.1--CAST	17	0	17.0	0.0	ONLY_REF_SPLICE	AC104123.1^ENSG00000251314.2	chr5:96379652:+	CAST^ENSG00000153113.24	chr5:96675539:+	LH00995:25:23T55JLT4:5:1355:17536:20954,LH00995:25:23T55JLT4:5:1365:2529:12728,LH00995:25:23T55JLT4:5:1494:5344:16680,LH00995:25:23T55JLT4:5:2162:2214:15825,LH00995:25:23T55JLT4:5:2184:16565:17086,LH00995:25:23T55JLT4:5:2190:28102:24765,LH00995:25:23T55JLT4:5:2365:36208:29305,LH00995:25:23T55JLT4:6:1195:2408:29361,LH00995:25:23T55JLT4:6:1287:18539:7278,LH00995:25:23T55JLT4:6:1289:31661:3074,LH00995:25:23T55JLT4:6:1378:42575:17268,LH00995:25:23T55JLT4:6:1423:19494:9183,LH00995:25:23T55JLT4:6:2415:45811:20491,LH00995:25:23T55JLT4:8:1122:13321:13737,LH00995:25:23T55JLT4:8:1207:11744:6969,LH00995:25:23T55JLT4:8:1210:47364:26068,LH00995:25:23T55JLT4:8:2291:27236:26320	.	YES_LDAS	0.0577	GT	1.7819	AG	1.8295	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.11Mb]""]"	chr5:96379652-chr5:96675539	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	17
PKNOX2--MEIS3	16	0	16.0	0.0	ONLY_REF_SPLICE	PKNOX2^ENSG00000165495.16	chr11:125385722:+	MEIS3^ENSG00000105419.18	chr19:47417350:-	LH00995:25:23T55JLT4:5:1109:44524:16778,LH00995:25:23T55JLT4:5:1310:14082:25311,LH00995:25:23T55JLT4:5:1498:7051:8398,LH00995:25:23T55JLT4:5:2109:34994:15321,LH00995:25:23T55JLT4:5:2127:2982:19174,LH00995:25:23T55JLT4:5:2466:16921:11677,LH00995:25:23T55JLT4:6:2247:6307:29501,LH00995:25:23T55JLT4:8:1196:18927:15236,LH00995:25:23T55JLT4:8:1293:11525:6283,LH00995:25:23T55JLT4:8:1420:14308:18053,LH00995:25:23T55JLT4:8:2129:23474:27091,LH00995:25:23T55JLT4:8:2142:48448:2023,LH00995:25:23T55JLT4:8:2185:5854:18403,LH00995:25:23T55JLT4:8:2282:20319:22803,LH00995:25:23T55JLT4:8:2336:35496:17478,LH00995:25:23T55JLT4:8:2484:42558:29095	.	NO_LDAS	0.0543	GT	1.9656	AG	1.9656	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]"	chr11:125385722-chr19:47417350	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	16
NONO--KAT6A	16	0	16.0	0.0	INCL_NON_REF_SPLICE	NONO^ENSG00000147140.17	chrX:71290778:+	KAT6A^ENSG00000083168.11	chr8:41933275:-	LH00995:25:23T55JLT4:2:1130:7593:7235,LH00995:25:23T55JLT4:5:1111:43060:21668,LH00995:25:23T55JLT4:5:1181:39751:28660,LH00995:25:23T55JLT4:5:1243:40924:18866,LH00995:25:23T55JLT4:5:1365:27648:8483,LH00995:25:23T55JLT4:5:1388:6760:3830,LH00995:25:23T55JLT4:5:2151:21071:26713,LH00995:25:23T55JLT4:6:1181:27964:23574,LH00995:25:23T55JLT4:6:1222:29226:24302,LH00995:25:23T55JLT4:6:1413:48974:21710,LH00995:25:23T55JLT4:6:2228:9923:18838,LH00995:25:23T55JLT4:6:2319:24841:25199,LH00995:25:23T55JLT4:6:2334:38594:13653,LH00995:25:23T55JLT4:8:1198:12010:19398,LH00995:25:23T55JLT4:8:2214:25755:28156,LH00995:25:23T55JLT4:8:2282:49394:16301	.	NO_LDAS	0.0543	GC	1.7819	AG	1.4566	"[""INTERCHROMOSOMAL[chrX--chr8]""]"	chrX:71290778-chr8:41933275	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	16
TLR4--AL160272.1	16	1	16.0	1.0	ONLY_REF_SPLICE	TLR4^ENSG00000136869.16	chr9:117704565:+	AL160272.1^ENSG00000284977.2	chr9:117848065:+	LH00995:25:23T55JLT4:2:1112:7949:23602,LH00995:25:23T55JLT4:5:1414:45082:21836,LH00995:25:23T55JLT4:5:2168:13701:13891,LH00995:25:23T55JLT4:5:2214:45058:9604,LH00995:25:23T55JLT4:6:1247:16751:28058,LH00995:25:23T55JLT4:6:1272:37866:4994,LH00995:25:23T55JLT4:6:1326:5741:20617,LH00995:25:23T55JLT4:6:2195:51126:9043,LH00995:25:23T55JLT4:8:1134:33328:12154,LH00995:25:23T55JLT4:8:1320:47162:12630,LH00995:25:23T55JLT4:8:1359:29533:7908,LH00995:25:23T55JLT4:8:1442:48804:17240,LH00995:25:23T55JLT4:8:1444:12294:25998,LH00995:25:23T55JLT4:8:1469:21096:2990,LH00995:25:23T55JLT4:8:2130:7181:22523,LH00995:25:23T55JLT4:8:2257:37559:25479	LH00995:25:23T55JLT4:5:1151:47501:18515	YES_LDAS	0.0577	GT	1.7968	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[34720]""]"	chr9:117704565-chr9:117848065	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	17
AP001347.1--ANKRD20A11P	16	1	16.0	0.53	ONLY_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13970110:-	LH00995:25:23T55JLT4:5:1260:30440:20267,LH00995:25:23T55JLT4:5:1268:49726:5554,LH00995:25:23T55JLT4:5:1284:38942:14396,LH00995:25:23T55JLT4:5:1445:31855:22327,LH00995:25:23T55JLT4:5:2171:44209:12784,LH00995:25:23T55JLT4:5:2349:51563:7137,LH00995:25:23T55JLT4:5:2371:46620:27777,LH00995:25:23T55JLT4:6:1103:28959:11285,LH00995:25:23T55JLT4:6:1213:43464:14017,LH00995:25:23T55JLT4:6:1420:33061:25479,LH00995:25:23T55JLT4:6:2159:36645:20729,LH00995:25:23T55JLT4:6:2198:41442:17913,LH00995:25:23T55JLT4:6:2438:4754:14676,LH00995:25:23T55JLT4:8:1260:44751:9772,LH00995:25:23T55JLT4:8:1458:44379:15096,LH00995:25:23T55JLT4:8:2332:31281:12140	LH00995:25:23T55JLT4:8:2468:49168:26783	YES_LDAS	0.0561	GT	1.8323	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13970110	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	17
AC242842.1--SEC22B2P	15	1	2.5	0.17	ONLY_REF_SPLICE	AC242842.1^ENSG00000275557.1	chr1:149608516:+	SEC22B2P^ENSG00000274423.1	chr1:149351251:+	LH00995:25:23T55JLT4:5:1173:9689:13107,LH00995:25:23T55JLT4:5:1308:31321:25073,LH00995:25:23T55JLT4:5:1484:44322:23181,LH00995:25:23T55JLT4:5:2178:32066:17142,LH00995:25:23T55JLT4:5:2267:33659:13401,LH00995:25:23T55JLT4:6:1185:5433:25970,LH00995:25:23T55JLT4:6:2189:28344:15096,LH00995:25:23T55JLT4:6:2304:27835:21948,LH00995:25:23T55JLT4:8:1134:1324:16638,LH00995:25:23T55JLT4:8:1235:30763:17408,LH00995:25:23T55JLT4:8:1407:23935:27918,LH00995:25:23T55JLT4:8:2204:44621:19132,LH00995:25:23T55JLT4:8:2226:11468:6633,LH00995:25:23T55JLT4:8:2291:20376:23322,LH00995:25:23T55JLT4:8:2378:15513:16582	LH00995:25:23T55JLT4:6:2185:51805:5652	YES_LDAS	0.0091	GT	1.7819	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.25Mb]""]"	chr1:149608516-chr1:149351251	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	16
PLCXD1--IGH@-ext	14	0	14.0	0.0	INCL_NON_REF_SPLICE	PLCXD1^ENSG00000182378.15	chrX:293089:+	IGH@-ext^IGH.g@-ext	chr14:105743073:-	LH00995:25:23T55JLT4:2:1165:46069:4377,LH00995:25:23T55JLT4:5:1187:28846:17114,LH00995:25:23T55JLT4:5:1236:46951:4895,LH00995:25:23T55JLT4:5:1241:11064:9828,LH00995:25:23T55JLT4:5:1251:31289:21178,LH00995:25:23T55JLT4:5:1385:6639:19258,LH00995:25:23T55JLT4:5:1434:34468:14270,LH00995:25:23T55JLT4:5:2184:16282:25031,LH00995:25:23T55JLT4:5:2409:24518:26488,LH00995:25:23T55JLT4:6:1143:25302:21038,LH00995:25:23T55JLT4:6:1339:6356:15965,LH00995:25:23T55JLT4:6:2477:41159:17955,LH00995:25:23T55JLT4:8:1209:13256:18641,LH00995:25:23T55JLT4:8:2430:28999:17885	.	NO_LDAS	0.0475	AT	1.9086	TG	1.7465	"[""INTERCHROMOSOMAL[chrX--chr14]""]"	chrX:293089-chr14:105743073	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	14
TRIO--TMEM123	12	0	12.0	0.0	ONLY_REF_SPLICE	TRIO^ENSG00000038382.20	chr5:14143882:+	TMEM123^ENSG00000152558.15	chr11:102448868:-	LH00995:25:23T55JLT4:5:1277:12609:3088,LH00995:25:23T55JLT4:5:1279:42251:3648,LH00995:25:23T55JLT4:5:1478:1154:24779,LH00995:25:23T55JLT4:5:2107:27697:3410,LH00995:25:23T55JLT4:6:1141:4673:10192,LH00995:25:23T55JLT4:6:2214:38643:26180,LH00995:25:23T55JLT4:6:2228:50341:12308,LH00995:25:23T55JLT4:6:2261:15732:15279,LH00995:25:23T55JLT4:8:1152:33481:24330,LH00995:25:23T55JLT4:8:1342:12010:12392,LH00995:25:23T55JLT4:8:1447:36717:18249,LH00995:25:23T55JLT4:8:2185:17123:2527	.	YES_LDAS	0.0407	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr11]""]"	chr5:14143882-chr11:102448868	False			1		PASS	12
LEPROTL1--SMG1P1	12	0	4.0	0.0	ONLY_REF_SPLICE	LEPROTL1^ENSG00000104660.19	chr8:30104991:+	SMG1P1^ENSG00000237296.9	chr16:22451620:+	LH00995:25:23T55JLT4:2:1150:23126:29067,LH00995:25:23T55JLT4:5:1252:32138:13877,LH00995:25:23T55JLT4:5:1302:27576:14045,LH00995:25:23T55JLT4:5:2216:24097:12700,LH00995:25:23T55JLT4:5:2259:28271:4237,LH00995:25:23T55JLT4:5:2311:26742:8847,LH00995:25:23T55JLT4:6:1145:50940:2752,LH00995:25:23T55JLT4:6:1152:13637:4027,LH00995:25:23T55JLT4:6:2264:39330:18571,LH00995:25:23T55JLT4:6:2271:32462:20491,LH00995:25:23T55JLT4:8:1135:31556:2219,LH00995:25:23T55JLT4:8:1492:26443:8160	.	YES_LDAS	0.0136	GC	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr16]""]"	chr8:30104991-chr16:22451620	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	12
HRH1--ATG7	12	0	12.0	0.0	ONLY_REF_SPLICE	HRH1^ENSG00000196639.7	chr3:11154554:+	ATG7^ENSG00000197548.12	chr3:11298686:+	LH00995:25:23T55JLT4:2:1163:17496:6227,LH00995:25:23T55JLT4:5:1352:45624:26474,LH00995:25:23T55JLT4:5:1484:15028:19748,LH00995:25:23T55JLT4:5:2134:18758:15082,LH00995:25:23T55JLT4:5:2336:30407:1462,LH00995:25:23T55JLT4:5:2408:28150:8763,LH00995:25:23T55JLT4:6:1164:36742:29669,LH00995:25:23T55JLT4:6:1192:17698:29669,LH00995:25:23T55JLT4:6:1350:22414:3957,LH00995:25:23T55JLT4:8:2214:40277:16596,LH00995:25:23T55JLT4:8:2460:1752:3704,LH00995:25:23T55JLT4:8:2481:47242:26783	.	YES_LDAS	0.0407	GT	1.2867	AG	1.7968	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]"	chr3:11154554-chr3:11298686	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	12
GNG10--UGCG	12	0	11.92	0.0	ONLY_REF_SPLICE	GNG10^ENSG00000242616.4	chr9:111666946:+	UGCG^ENSG00000148154.10	chr9:111914605:+	LH00995:25:23T55JLT4:5:1432:40439:19146,LH00995:25:23T55JLT4:6:1112:38667:26951,LH00995:25:23T55JLT4:6:1271:46984:17254,LH00995:25:23T55JLT4:6:2255:34662:12952,LH00995:25:23T55JLT4:6:2352:26467:16610,LH00995:25:23T55JLT4:8:1105:21718:29123,LH00995:25:23T55JLT4:8:1135:23935:9001,LH00995:25:23T55JLT4:8:1146:28991:8174,LH00995:25:23T55JLT4:8:1308:25966:20365,LH00995:25:23T55JLT4:8:2112:13386:15391,LH00995:25:23T55JLT4:8:2428:8774:28450,LH00995:25:23T55JLT4:8:2441:18046:18501	.	YES_LDAS	0.0405	GT	1.9329	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]"	chr9:111666946-chr9:111914605	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	12
EWSR1--IGH@-ext	12	0	12.0	0.0	INCL_NON_REF_SPLICE	EWSR1^ENSG00000182944.18	chr22:29287118:+	IGH@-ext^IGH.g@-ext	chr14:106679373:-	LH00995:25:23T55JLT4:5:1118:2165:20449,LH00995:25:23T55JLT4:5:1148:3605:10556,LH00995:25:23T55JLT4:5:1189:35269:21598,LH00995:25:23T55JLT4:5:1284:43853:21780,LH00995:25:23T55JLT4:5:2204:16088:9253,LH00995:25:23T55JLT4:5:2488:10069:8384,LH00995:25:23T55JLT4:6:1430:38853:7684,LH00995:25:23T55JLT4:6:1495:22665:7221,LH00995:25:23T55JLT4:6:2141:48270:26012,LH00995:25:23T55JLT4:6:2150:13345:9604,LH00995:25:23T55JLT4:8:2375:43521:11173,LH00995:25:23T55JLT4:8:2380:13451:24162	.	NO_LDAS	0.0407	AG	1.5656	TC	1.7465	"[""INTERCHROMOSOMAL[chr22--chr14]""]"	chr22:29287118-chr14:106679373	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	12
TPTE--BAGE2	11	0	11.0	0.0	ONLY_REF_SPLICE	TPTE^ENSG00000274391.5	chr21:10527412:+	BAGE2^ENSG00000187172.15	chr21:10514122:+	LH00995:25:23T55JLT4:5:1313:5975:28674,LH00995:25:23T55JLT4:5:1411:34072:21290,LH00995:25:23T55JLT4:5:2466:51385:25690,LH00995:25:23T55JLT4:6:1339:10085:21472,LH00995:25:23T55JLT4:6:1446:17698:11425,LH00995:25:23T55JLT4:6:2302:11242:23896,LH00995:25:23T55JLT4:6:2314:41110:27091,LH00995:25:23T55JLT4:8:1141:41766:11691,LH00995:25:23T55JLT4:8:1254:41668:9562,LH00995:25:23T55JLT4:8:1283:49152:13107,LH00995:25:23T55JLT4:8:2493:5741:27147	.	YES_LDAS	0.0373	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5122]""]"	chr21:10527412-chr21:10514122	False			1		PASS	11
TMEM123--PPP2R2C	11	0	11.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	PPP2R2C^ENSG00000074211.14	chr4:6381094:-	LH00995:25:23T55JLT4:2:1162:46684:8188,LH00995:25:23T55JLT4:5:1231:34145:14858,LH00995:25:23T55JLT4:5:2432:32543:20491,LH00995:25:23T55JLT4:6:2156:39832:12518,LH00995:25:23T55JLT4:6:2174:51918:18403,LH00995:25:23T55JLT4:6:2304:49767:3074,LH00995:25:23T55JLT4:6:2373:18927:12995,LH00995:25:23T55JLT4:8:1236:38060:21220,LH00995:25:23T55JLT4:8:1248:25772:9351,LH00995:25:23T55JLT4:8:1259:37801:9898,LH00995:25:23T55JLT4:8:2206:33061:25816	.	YES_LDAS	0.0373	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr11--chr4]""]"	chr11:102448812-chr4:6381094	False			1		PASS	11
PRKCA--ZNF585A	11	0	11.0	0.0	INCL_NON_REF_SPLICE	PRKCA^ENSG00000154229.12	chr17:66496283:+	ZNF585A^ENSG00000196967.11	chr19:37146612:-	LH00995:25:23T55JLT4:5:1170:13175:27217,LH00995:25:23T55JLT4:5:1305:4349:20253,LH00995:25:23T55JLT4:5:1484:13386:9393,LH00995:25:23T55JLT4:5:2398:26605:2752,LH00995:25:23T55JLT4:5:2423:7415:24499,LH00995:25:23T55JLT4:6:1283:18992:27315,LH00995:25:23T55JLT4:6:2163:15538:9169,LH00995:25:23T55JLT4:6:2223:7302:7432,LH00995:25:23T55JLT4:8:1151:38068:18936,LH00995:25:23T55JLT4:8:2108:45552:14410,LH00995:25:23T55JLT4:8:2312:27681:1645	.	NO_LDAS	0.0373	GT	1.9329	AG	1.5656	"[""INTERCHROMOSOMAL[chr17--chr19]""]"	chr17:66496283-chr19:37146612	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	11
FUS--CTNNA1	11	0	11.0	0.0	INCL_NON_REF_SPLICE	FUS^ENSG00000089280.19	chr16:31184352:+	CTNNA1^ENSG00000044115.21	chr5:138934073:+	LH00995:25:23T55JLT4:2:1157:43092:12728,LH00995:25:23T55JLT4:5:1164:20117:27049,LH00995:25:23T55JLT4:5:1287:25424:17661,LH00995:25:23T55JLT4:5:1378:8338:16007,LH00995:25:23T55JLT4:5:2171:43602:28240,LH00995:25:23T55JLT4:5:2455:43230:15349,LH00995:25:23T55JLT4:5:2466:47906:4811,LH00995:25:23T55JLT4:6:1311:17520:10080,LH00995:25:23T55JLT4:6:1421:26839:7782,LH00995:25:23T55JLT4:8:1179:26128:8146,LH00995:25:23T55JLT4:8:2254:13224:4937	.	NO_LDAS	0.0373	GT	1.8062	AG	1.9899	"[""INTERCHROMOSOMAL[chr16--chr5]""]"	chr16:31184352-chr5:138934073	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	11
C6orf62--ACOT13	11	0	11.0	0.0	ONLY_REF_SPLICE	C6orf62^ENSG00000112308.13	chr6:24714318:-	ACOT13^ENSG00000112304.11	chr6:24701459:+	LH00995:25:23T55JLT4:2:1130:30059:4279,LH00995:25:23T55JLT4:2:1164:44718:13079,LH00995:25:23T55JLT4:5:1193:6275:13191,LH00995:25:23T55JLT4:5:1412:18976:22046,LH00995:25:23T55JLT4:5:2323:37526:1743,LH00995:25:23T55JLT4:5:2413:13305:17969,LH00995:25:23T55JLT4:6:1435:7108:2948,LH00995:25:23T55JLT4:6:1453:9308:10823,LH00995:25:23T55JLT4:8:1338:17916:21976,LH00995:25:23T55JLT4:8:1416:38036:16385,LH00995:25:23T55JLT4:8:2344:39759:3228	.	YES_LDAS	0.0373	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[204]""]"	chr6:24714318-chr6:24701459	False			1		PASS	11
AL390860.1--TRIM58	11	0	11.0	0.0	ONLY_REF_SPLICE	AL390860.1^ENSG00000235749.3	chr1:247640429:+	TRIM58^ENSG00000162722.9	chr1:247860617:+	LH00995:25:23T55JLT4:2:1127:52007:1210,LH00995:25:23T55JLT4:2:1167:2448:21108,LH00995:25:23T55JLT4:5:1244:12868:17436,LH00995:25:23T55JLT4:5:2320:19720:27792,LH00995:25:23T55JLT4:6:1158:16792:3298,LH00995:25:23T55JLT4:6:2373:19736:7390,LH00995:25:23T55JLT4:8:1125:1202:6086,LH00995:25:23T55JLT4:8:1351:11557:18669,LH00995:25:23T55JLT4:8:1396:39104:23420,LH00995:25:23T55JLT4:8:2196:43464:11299,LH00995:25:23T55JLT4:8:2376:22107:2471	.	YES_LDAS	0.0373	GT	1.9219	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.10Mb]"",""NEIGHBORS[95932]""]"	chr1:247640429-chr1:247860617	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	11
YWHAE--CRK	10	0	10.0	0.0	ONLY_REF_SPLICE	YWHAE^ENSG00000108953.17	chr17:1400047:-	CRK^ENSG00000167193.8	chr17:1437155:-	LH00995:25:23T55JLT4:5:1253:1930:29179,LH00995:25:23T55JLT4:5:1380:36256:16133,LH00995:25:23T55JLT4:5:2143:47016:29697,LH00995:25:23T55JLT4:5:2215:42429:26348,LH00995:25:23T55JLT4:6:1278:1680:29473,LH00995:25:23T55JLT4:6:1338:29760:3985,LH00995:25:23T55JLT4:6:1402:19656:19384,LH00995:25:23T55JLT4:6:2229:7448:23686,LH00995:25:23T55JLT4:8:1351:26395:2836,LH00995:25:23T55JLT4:8:2218:39250:16918	.	YES_LDAS	0.0339	GT	1.9329	AG	1.8323	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20467]""]"	chr17:1400047-chr17:1437155	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
TMED3--MINAR1	10	0	10.0	0.0	ONLY_REF_SPLICE	TMED3^ENSG00000166557.14	chr15:79314005:+	MINAR1^ENSG00000169330.9	chr15:79456098:+	LH00995:25:23T55JLT4:5:1476:43141:10935,LH00995:25:23T55JLT4:5:2207:28093:4853,LH00995:25:23T55JLT4:5:2326:3573:20645,LH00995:25:23T55JLT4:6:1198:7610:19426,LH00995:25:23T55JLT4:6:2261:36005:3116,LH00995:25:23T55JLT4:6:2415:50972:21192,LH00995:25:23T55JLT4:6:2454:20149:13905,LH00995:25:23T55JLT4:6:2488:33554:13331,LH00995:25:23T55JLT4:8:1230:37923:13219,LH00995:25:23T55JLT4:8:1297:20173:28352	.	YES_LDAS	0.0339	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]"	chr15:79314005-chr15:79456098	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
RBM14--RBM4	10	0	10.0	0.0	ONLY_REF_SPLICE	RBM14^ENSG00000239306.5	chr11:66617057:+	RBM4^ENSG00000173933.21	chr11:66639700:+	LH00995:25:23T55JLT4:5:1396:42793:21066,LH00995:25:23T55JLT4:5:1454:16630:9351,LH00995:25:23T55JLT4:5:2353:42841:18515,LH00995:25:23T55JLT4:5:2420:24024:1729,LH00995:25:23T55JLT4:6:2402:30723:27231,LH00995:25:23T55JLT4:8:1171:20618:21612,LH00995:25:23T55JLT4:8:1210:6501:13863,LH00995:25:23T55JLT4:8:2106:3289:4293,LH00995:25:23T55JLT4:8:2192:30553:14270,LH00995:25:23T55JLT4:8:2474:10417:10192	.	YES_LDAS	0.0339	GT	1.7465	AG	1.9086	"[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]"	chr11:66617057-chr11:66639700	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
NSF--LRRC37A3	10	0	10.0	0.0	ONLY_REF_SPLICE	NSF^ENSG00000073969.18	chr17:46704854:+	LRRC37A3^ENSG00000176809.10	chr17:64892600:-	LH00995:25:23T55JLT4:5:1493:35989:11467,LH00995:25:23T55JLT4:5:2243:34800:26867,LH00995:25:23T55JLT4:5:2311:8087:7866,LH00995:25:23T55JLT4:6:1458:23239:11215,LH00995:25:23T55JLT4:6:2255:7270:18389,LH00995:25:23T55JLT4:6:2364:29064:7824,LH00995:25:23T55JLT4:8:1363:10805:3130,LH00995:25:23T55JLT4:8:2196:24283:5036,LH00995:25:23T55JLT4:8:2273:42850:29571,LH00995:25:23T55JLT4:8:2367:49799:14508	.	YES_LDAS	0.0339	GT	1.6729	AG	1.7232	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr17:18.10Mb]""]"	chr17:46704854-chr17:64892600	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
LILRA5--LILRB1	10	0	10.0	0.0	ONLY_REF_SPLICE	LILRA5^ENSG00000187116.14	chr19:54312335:-	LILRB1^ENSG00000104972.15	chr19:54631500:+	LH00995:25:23T55JLT4:5:1277:25885:26138,LH00995:25:23T55JLT4:5:1376:10190:11565,LH00995:25:23T55JLT4:5:1473:46878:24583,LH00995:25:23T55JLT4:5:2183:29582:7207,LH00995:25:23T55JLT4:5:2189:29477:19945,LH00995:25:23T55JLT4:6:1143:4560:22663,LH00995:25:23T55JLT4:8:1164:1461:3116,LH00995:25:23T55JLT4:8:1255:37065:18291,LH00995:25:23T55JLT4:8:2235:7707:17044,LH00995:25:23T55JLT4:8:2250:3152:15180	.	YES_LDAS	0.0339	GT	1.7819	AG	1.6729	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]"	chr19:54312335-chr19:54631500	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
LDLRAD3--PRR5L	10	0	10.0	0.0	INCL_NON_REF_SPLICE	LDLRAD3^ENSG00000179241.13	chr11:36098461:+	PRR5L^ENSG00000135362.14	chr11:36296290:+	LH00995:25:23T55JLT4:2:1107:26556:27834,LH00995:25:23T55JLT4:5:1246:14915:25914,LH00995:25:23T55JLT4:5:1433:13580:7740,LH00995:25:23T55JLT4:5:2103:16897:15699,LH00995:25:23T55JLT4:5:2170:51239:26951,LH00995:25:23T55JLT4:5:2294:49176:1911,LH00995:25:23T55JLT4:5:2424:25852:26306,LH00995:25:23T55JLT4:6:1167:29428:21710,LH00995:25:23T55JLT4:6:1283:16379:26264,LH00995:25:23T55JLT4:8:1165:1526:6199	.	YES_LDAS	0.0339	GT	1.9329	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[64152]""]"	chr11:36098461-chr11:36296290	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
TMEM123--WTAPP1	9	0	9.0	0.0	ONLY_REF_SPLICE	TMEM123^ENSG00000152558.15	chr11:102448812:-	WTAPP1^ENSG00000255282.6	chr11:102798024:+	LH00995:25:23T55JLT4:5:1132:23280:22046,LH00995:25:23T55JLT4:5:2228:47817:24863,LH00995:25:23T55JLT4:6:1120:31151:19090,LH00995:25:23T55JLT4:6:1208:7763:22495,LH00995:25:23T55JLT4:6:1223:41571:21164,LH00995:25:23T55JLT4:6:1484:22940:19468,LH00995:25:23T55JLT4:8:1388:17876:16442,LH00995:25:23T55JLT4:8:2436:16379:17184,LH00995:25:23T55JLT4:8:2482:10150:22537	.	YES_LDAS	0.0305	GT	1.9656	AG	1.9219	"[""INTRACHROMOSOMAL[chr11:0.28Mb]""]"	chr11:102448812-chr11:102798024	False			1		PASS	9
HLA-B--HLA-V	9	0	4.5	0.0	ONLY_REF_SPLICE	HLA-B^ENSG00000234745.13	chr6:31357086:-	HLA-V^ENSG00000181126.13	chr6:29792437:+	LH00995:25:23T55JLT4:5:1177:48755:28814,LH00995:25:23T55JLT4:6:1173:32883:19538,LH00995:25:23T55JLT4:6:1286:19931:28324,LH00995:25:23T55JLT4:6:2132:18199:17086,LH00995:25:23T55JLT4:6:2149:37721:1575,LH00995:25:23T55JLT4:6:2186:20837:5176,LH00995:25:23T55JLT4:6:2290:10247:7488,LH00995:25:23T55JLT4:8:1125:20780:14101,LH00995:25:23T55JLT4:8:1371:32713:21626	.	YES_LDAS	0.0153	GT	1.7056	AG	1.8323	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:1.56Mb]""]"	chr6:31357086-chr6:29792437	True	"pair|MHC complexes|HLA-V	HLA-B; pair|recurrent breakpoints"	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
FBXO25--SEPTIN14	9	0	9.0	0.0	ONLY_REF_SPLICE	FBXO25^ENSG00000147364.17	chr8:435707:+	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	LH00995:25:23T55JLT4:5:1103:18232:9968,LH00995:25:23T55JLT4:5:1194:51797:10150,LH00995:25:23T55JLT4:5:1338:3985:24863,LH00995:25:23T55JLT4:5:2357:14308:7095,LH00995:25:23T55JLT4:6:1271:37567:6128,LH00995:25:23T55JLT4:8:1215:12650:19160,LH00995:25:23T55JLT4:8:1229:1493:29151,LH00995:25:23T55JLT4:8:1309:14243:28142,LH00995:25:23T55JLT4:8:1408:18636:2625	.	YES_LDAS	0.0305	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:435707-chr7:55796092	True		aih_curated_blacklist score(6)	0	aih_curated_blacklist score(6)	FAIL	9
DDX24--AL022099.1	9	0	9.0	0.0	INCL_NON_REF_SPLICE	DDX24^ENSG00000089737.17	chr14:94051188:-	AL022099.1^ENSG00000271162.1	chr6:48952713:-	LH00995:25:23T55JLT4:5:1211:28449:16960,LH00995:25:23T55JLT4:5:2142:13370:25984,LH00995:25:23T55JLT4:6:1191:25011:8959,LH00995:25:23T55JLT4:6:1481:36070:16456,LH00995:25:23T55JLT4:6:2193:34695:13625,LH00995:25:23T55JLT4:8:2272:42032:25297,LH00995:25:23T55JLT4:8:2287:33862:1589,LH00995:25:23T55JLT4:8:2362:26281:8048,LH00995:25:23T55JLT4:8:2430:48189:26965	.	NO_LDAS	0.0305	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr14--chr6]""]"	chr14:94051188-chr6:48952713	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
C1QC--IGL-@-ext	9	0	3.0	0.0	INCL_NON_REF_SPLICE	C1QC^ENSG00000159189.12	chr1:22647462:+	IGL-@-ext^IGL-.g@-ext	chr22:22661133:-	LH00995:25:23T55JLT4:5:1366:45260:4181,LH00995:25:23T55JLT4:5:1480:47687:15054,LH00995:25:23T55JLT4:5:2278:7965:8861,LH00995:25:23T55JLT4:5:2355:24647:5274,LH00995:25:23T55JLT4:6:2296:16557:9982,LH00995:25:23T55JLT4:8:1163:1712:10949,LH00995:25:23T55JLT4:8:1217:8087:14144,LH00995:25:23T55JLT4:8:1286:25286:8987,LH00995:25:23T55JLT4:8:1358:49297:4335	.	NO_LDAS	0.0102	TT	1.8892	GC	1.4256	"[""INTERCHROMOSOMAL[chr1--chr22]""]"	chr1:22647462-chr22:22661133	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	9
AGAP5--AC022400.4	9	1	9.0	0.6	INCL_NON_REF_SPLICE	AGAP5^ENSG00000172650.14	chr10:73692043:-	AC022400.4^ENSG00000272140.2	chr10:73713332:-	LH00995:25:23T55JLT4:5:1398:3807:2331,LH00995:25:23T55JLT4:5:1490:46086:28814,LH00995:25:23T55JLT4:5:2337:16565:3270,LH00995:25:23T55JLT4:5:2431:30666:11944,LH00995:25:23T55JLT4:6:1163:2553:17647,LH00995:25:23T55JLT4:6:1452:12083:26867,LH00995:25:23T55JLT4:6:2213:30415:5792,LH00995:25:23T55JLT4:8:1246:49047:23350,LH00995:25:23T55JLT4:8:2417:1348:21052	LH00995:25:23T55JLT4:5:1217:37656:10570	YES_LDAS	0.0325	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5854]""]"	chr10:73692043-chr10:73713332	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
STEAP1--RAPGEF5	8	0	4.0	0.0	ONLY_REF_SPLICE	STEAP1^ENSG00000164647.9	chr7:90162078:+	RAPGEF5^ENSG00000136237.19	chr7:22318037:-	LH00995:25:23T55JLT4:2:1146:19453:10654,LH00995:25:23T55JLT4:5:1482:38028:5778,LH00995:25:23T55JLT4:6:1178:25052:18137,LH00995:25:23T55JLT4:6:1367:31653:11187,LH00995:25:23T55JLT4:6:2206:38052:24344,LH00995:25:23T55JLT4:6:2318:22527:13401,LH00995:25:23T55JLT4:6:2368:47809:20505,LH00995:25:23T55JLT4:8:2146:31240:23420	.	YES_LDAS	0.0136	GT	1.7465	AG	1.8295	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:67.80Mb]""]"	chr7:90162078-chr7:22318037	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	8
PICALM--SYTL2	8	0	8.0	0.0	ONLY_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85974708:-	SYTL2^ENSG00000137501.17	chr11:85758114:-	LH00995:25:23T55JLT4:5:1142:7868:9113,LH00995:25:23T55JLT4:5:2138:51927:1266,LH00995:25:23T55JLT4:5:2430:29218:27904,LH00995:25:23T55JLT4:6:1126:29679:6619,LH00995:25:23T55JLT4:6:1217:48302:23686,LH00995:25:23T55JLT4:6:1482:3395:1196,LH00995:25:23T55JLT4:6:2134:13750:9043,LH00995:25:23T55JLT4:8:2413:17196:27147	.	YES_LDAS	0.0272	GT	1.9086	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"	chr11:85974708-chr11:85758114	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
MYH6--MYH9	8	0	8.0	0.0	ONLY_REF_SPLICE	MYH6^ENSG00000197616.13	chr14:23404296:-	MYH9^ENSG00000100345.22	chr22:36321821:-	LH00995:25:23T55JLT4:6:1235:9406:16484,LH00995:25:23T55JLT4:6:1483:8580:4545,LH00995:25:23T55JLT4:6:2170:37445:28702,LH00995:25:23T55JLT4:8:1360:7779:22831,LH00995:25:23T55JLT4:8:1433:40334:10640,LH00995:25:23T55JLT4:8:2275:36960:12056,LH00995:25:23T55JLT4:8:2428:32446:20575,LH00995:25:23T55JLT4:8:2465:18345:24709	.	NO_LDAS	0.0272	GT	1.6895	AG	1.9899	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr14--chr22]""]"	chr14:23404296-chr22:36321821	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	8
MAP3K20--RAPGEF4	8	0	8.0	0.0	ONLY_REF_SPLICE	MAP3K20^ENSG00000091436.17	chr2:173091190:+	RAPGEF4^ENSG00000091428.18	chr2:172917802:+	LH00995:25:23T55JLT4:2:1112:18280:27848,LH00995:25:23T55JLT4:5:2441:40342:7824,LH00995:25:23T55JLT4:5:2468:50487:15335,LH00995:25:23T55JLT4:6:1297:14793:29347,LH00995:25:23T55JLT4:6:1386:1574:27357,LH00995:25:23T55JLT4:6:2114:30205:3578,LH00995:25:23T55JLT4:6:2152:16881:5974,LH00995:25:23T55JLT4:8:1157:42720:9646	.	YES_LDAS	0.0272	GT	1.1589	AG	1.7968	"[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22542]""]"	chr2:173091190-chr2:172917802	False			1		PASS	8
HIC2--PI4KA	8	0	8.0	0.0	ONLY_REF_SPLICE	HIC2^ENSG00000169635.10	chr22:21442857:+	PI4KA^ENSG00000241973.11	chr22:20733843:-	LH00995:25:23T55JLT4:5:2285:9616:20911,LH00995:25:23T55JLT4:5:2310:15489:7992,LH00995:25:23T55JLT4:5:2487:34420:24190,LH00995:25:23T55JLT4:6:1273:24995:27707,LH00995:25:23T55JLT4:6:2329:42486:5568,LH00995:25:23T55JLT4:6:2358:45576:5708,LH00995:25:23T55JLT4:8:2169:42202:23658,LH00995:25:23T55JLT4:8:2484:5482:10416	.	YES_LDAS	0.0272	GT	1.7465	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr22:0.56Mb]""]"	chr22:21442857-chr22:20733843	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
CHCHD10--AC005064.1	8	0	8.0	0.0	INCL_NON_REF_SPLICE	CHCHD10^ENSG00000250479.9	chr22:23767834:-	AC005064.1^ENSG00000234715.2	chr7:103446122:+	LH00995:25:23T55JLT4:2:1109:14300:17815,LH00995:25:23T55JLT4:5:1133:29380:5568,LH00995:25:23T55JLT4:5:2383:14421:29543,LH00995:25:23T55JLT4:6:1392:41547:27988,LH00995:25:23T55JLT4:6:1438:34258:16371,LH00995:25:23T55JLT4:6:1458:25367:7558,LH00995:25:23T55JLT4:6:2212:31604:18669,LH00995:25:23T55JLT4:8:2204:35520:2836	.	NO_LDAS	0.0272	GT	1.6402	AG	1.1589	"[""INTERCHROMOSOMAL[chr22--chr7]""]"	chr22:23767834-chr7:103446122	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
AC211476.4--CCDC146	8	0	1.6	0.0	ONLY_REF_SPLICE	AC211476.4^ENSG00000277125.1	chr7:73069531:+	CCDC146^ENSG00000135205.15	chr7:77236947:+	LH00995:25:23T55JLT4:5:1267:33732:26082,LH00995:25:23T55JLT4:5:1267:33740:26068,LH00995:25:23T55JLT4:5:2327:45050:24387,LH00995:25:23T55JLT4:6:1179:28781:12854,LH00995:25:23T55JLT4:6:1375:40196:1603,LH00995:25:23T55JLT4:8:1493:5158:6521,LH00995:25:23T55JLT4:8:2292:5506:14746,LH00995:25:23T55JLT4:8:2468:43715:27960	.	YES_LDAS	0.0054	GT	1.4566	AG	1.9329	"[""INTRACHROMOSOMAL[chr7:4.05Mb]""]"	chr7:73069531-chr7:77236947	True		aih_curated_blacklist score(5)	0	aih_curated_blacklist score(5)	FAIL	8
TMEFF2--TEX41	7	0	7.0	0.0	ONLY_REF_SPLICE	TMEFF2^ENSG00000144339.12	chr2:191998262:-	TEX41^ENSG00000226674.11	chr2:144768098:+	LH00995:25:23T55JLT4:5:2116:27220:19062,LH00995:25:23T55JLT4:5:2138:50252:2906,LH00995:25:23T55JLT4:6:1131:23417:3788,LH00995:25:23T55JLT4:6:1261:19211:16932,LH00995:25:23T55JLT4:6:1279:22859:25802,LH00995:25:23T55JLT4:6:1366:45576:19300,LH00995:25:23T55JLT4:6:1473:4988:3312	.	YES_LDAS	0.0238	GT	1.8892	AG	1.9219	"[""INTRACHROMOSOMAL[chr2:46.69Mb]""]"	chr2:191998262-chr2:144768098	False			0	Read count too low: 7 < 8	FAIL	7
PDGFD--DYNC2H1	7	0	7.0	0.0	ONLY_REF_SPLICE	PDGFD^ENSG00000170962.13	chr11:103926912:-	DYNC2H1^ENSG00000187240.16	chr11:103468589:+	LH00995:25:23T55JLT4:5:1455:1995:15923,LH00995:25:23T55JLT4:5:2173:23814:6885,LH00995:25:23T55JLT4:5:2321:7828:14536,LH00995:25:23T55JLT4:5:2382:9907:17184,LH00995:25:23T55JLT4:6:2319:49742:19090,LH00995:25:23T55JLT4:6:2496:42178:16245,LH00995:25:23T55JLT4:8:1422:2068:29137	.	YES_LDAS	0.0238	GT	1.6729	AG	1.8892	"[""INTRACHROMOSOMAL[chr11:0.43Mb]""]"	chr11:103926912-chr11:103468589	False			0	Read count too low: 7 < 8	FAIL	7
FOXO1--LINC00598	7	0	7.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40474095:-	LH00995:25:23T55JLT4:5:1131:49880:21766,LH00995:25:23T55JLT4:5:1273:24971:18529,LH00995:25:23T55JLT4:5:1355:43392:2177,LH00995:25:23T55JLT4:5:2284:38206:12476,LH00995:25:23T55JLT4:6:2269:6784:19875,LH00995:25:23T55JLT4:6:2276:45139:21262,LH00995:25:23T55JLT4:8:2163:12965:26628	.	YES_LDAS	0.0238	GT	1.7232	AG	1.8295	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40474095	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
FAM193B--STAT5B	7	0	7.0	0.0	INCL_NON_REF_SPLICE	FAM193B^ENSG00000146067.16	chr5:177554489:-	STAT5B^ENSG00000173757.10	chr17:42201805:-	LH00995:25:23T55JLT4:5:1287:47865:9113,LH00995:25:23T55JLT4:5:1324:42955:18487,LH00995:25:23T55JLT4:5:1342:46806:6605,LH00995:25:23T55JLT4:6:1473:29582:4349,LH00995:25:23T55JLT4:6:2369:15594:17927,LH00995:25:23T55JLT4:8:1453:30164:1462,LH00995:25:23T55JLT4:8:2216:9284:21514	.	NO_LDAS	0.0238	GT	1.231	AG	1.5546	"[""INTERCHROMOSOMAL[chr5--chr17]""]"	chr5:177554489-chr17:42201805	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	7
CMTM8--CMTM7	7	0	7.0	0.0	ONLY_REF_SPLICE	CMTM8^ENSG00000170293.9	chr3:32239119:+	CMTM7^ENSG00000153551.14	chr3:32441840:+	LH00995:25:23T55JLT4:5:1124:5361:23630,LH00995:25:23T55JLT4:5:1334:5911:9618,LH00995:25:23T55JLT4:5:2321:11671:21388,LH00995:25:23T55JLT4:6:2461:14793:2752,LH00995:25:23T55JLT4:8:1443:36750:22649,LH00995:25:23T55JLT4:8:1444:29372:5946,LH00995:25:23T55JLT4:8:2321:1380:22845	.	YES_LDAS	0.0238	GT	1.9656	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]"	chr3:32239119-chr3:32441840	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
AL139042.1--CNR1	7	0	7.0	0.0	ONLY_REF_SPLICE	AL139042.1^ENSG00000234426.3	chr6:88324000:-	CNR1^ENSG00000118432.12	chr6:88145337:-	LH00995:25:23T55JLT4:5:1204:41134:22677,LH00995:25:23T55JLT4:5:1423:13386:6619,LH00995:25:23T55JLT4:5:1439:9219:29585,LH00995:25:23T55JLT4:5:2312:13483:26068,LH00995:25:23T55JLT4:6:1178:8103:28044,LH00995:25:23T55JLT4:6:2381:26484:25550,LH00995:25:23T55JLT4:8:1286:48027:28058	.	YES_LDAS	0.0238	GT	1.9899	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[11445]""]"	chr6:88324000-chr6:88145337	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	7
AC092691.1--LSAMP	7	0	7.0	0.0	ONLY_REF_SPLICE	AC092691.1^ENSG00000239268.3	chr3:117997182:-	LSAMP^ENSG00000185565.12	chr3:116444955:-	LH00995:25:23T55JLT4:2:1136:20586:25844,LH00995:25:23T55JLT4:5:2485:22730:13751,LH00995:25:23T55JLT4:6:2278:29072:8146,LH00995:25:23T55JLT4:8:1152:4098:23686,LH00995:25:23T55JLT4:8:1387:11881:18894,LH00995:25:23T55JLT4:8:1387:8750:5036,LH00995:25:23T55JLT4:8:2206:47906:28828	.	YES_LDAS	0.0238	GT	1.8892	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.53Mb]""]"	chr3:117997182-chr3:116444955	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
AC083837.1--ZFHX4	7	0	7.0	0.0	ONLY_REF_SPLICE	AC083837.1^ENSG00000285744.1	chr8:78805695:+	ZFHX4^ENSG00000091656.19	chr8:76778208:+	LH00995:25:23T55JLT4:6:1105:33651:2681,LH00995:25:23T55JLT4:8:1191:28271:15727,LH00995:25:23T55JLT4:8:1332:29622:14144,LH00995:25:23T55JLT4:8:1446:10384:21878,LH00995:25:23T55JLT4:8:2319:50867:17619,LH00995:25:23T55JLT4:8:2326:6485:12378,LH00995:25:23T55JLT4:8:2358:40334:21010	.	YES_LDAS	0.0238	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:1.94Mb]""]"	chr8:78805695-chr8:76778208	False			0	Read count too low: 7 < 8	FAIL	7
TMEFF2--TEX41	6	0	6.0	0.0	ONLY_REF_SPLICE	TMEFF2^ENSG00000144339.12	chr2:191998262:-	TEX41^ENSG00000226674.11	chr2:144667969:+	LH00995:25:23T55JLT4:5:1106:18952:2247,LH00995:25:23T55JLT4:5:2169:19356:18165,LH00995:25:23T55JLT4:6:1493:25747:5694,LH00995:25:23T55JLT4:6:2168:41361:10514,LH00995:25:23T55JLT4:8:1345:28546:28814,LH00995:25:23T55JLT4:8:2120:51579:24176	.	YES_LDAS	0.0204	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr2:46.69Mb]""]"	chr2:191998262-chr2:144667969	False			0	Read count too low: 6 < 8	FAIL	6
PICALM--SYTL2	6	0	6.0	0.0	ONLY_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85981129:-	SYTL2^ENSG00000137501.17	chr11:85758114:-	LH00995:25:23T55JLT4:5:1432:33773:17857,LH00995:25:23T55JLT4:5:2230:49483:7039,LH00995:25:23T55JLT4:6:1148:44184:14003,LH00995:25:23T55JLT4:6:1372:17471:8483,LH00995:25:23T55JLT4:6:2350:48351:16484,LH00995:25:23T55JLT4:8:2290:39832:19216	.	YES_LDAS	0.0204	GT	1.9219	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"	chr11:85981129-chr11:85758114	False			0	Read count too low: 6 < 8	FAIL	6
PCMTD1--PXDNL	6	0	6.0	0.0	ONLY_REF_SPLICE	PCMTD1^ENSG00000168300.14	chr8:51831444:-	PXDNL^ENSG00000147485.13	chr8:51654760:-	LH00995:25:23T55JLT4:5:1391:47364:17408,LH00995:25:23T55JLT4:6:2188:29897:3578,LH00995:25:23T55JLT4:6:2451:21031:7306,LH00995:25:23T55JLT4:8:1270:2618:2794,LH00995:25:23T55JLT4:8:2177:18685:7362,LH00995:25:23T55JLT4:8:2346:18758:19903	.	YES_LDAS	0.0204	GT	1.9329	AG	1.8256	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[8130]""]"	chr8:51831444-chr8:51654760	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
PCGF6--MNX1	6	0	3.0	0.0	INCL_NON_REF_SPLICE	PCGF6^ENSG00000156374.16	chr10:103350983:-	MNX1^ENSG00000130675.15	chr7:157005174:-	LH00995:25:23T55JLT4:5:2185:30156:13471,LH00995:25:23T55JLT4:6:1111:20481:22439,LH00995:25:23T55JLT4:6:1458:26783:14970,LH00995:25:23T55JLT4:6:2362:17779:1673,LH00995:25:23T55JLT4:8:1402:29542:2962,LH00995:25:23T55JLT4:8:2201:8103:23924	.	NO_LDAS	0.0102	GT	1.2419	AG	1.231	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:103350983-chr7:157005174	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
PCGF6--C10orf99	6	0	3.0	0.0	INCL_NON_REF_SPLICE	PCGF6^ENSG00000156374.16	chr10:103350983:-	C10orf99^ENSG00000188373.5	chr10:84184831:+	LH00995:25:23T55JLT4:5:2185:30156:13471,LH00995:25:23T55JLT4:6:1111:20481:22439,LH00995:25:23T55JLT4:6:1458:26783:14970,LH00995:25:23T55JLT4:6:2362:17779:1673,LH00995:25:23T55JLT4:8:1402:29542:2962,LH00995:25:23T55JLT4:8:2201:8103:23924	.	NO_LDAS	0.0102	GT	1.2419	AG	1.231	"[""INTRACHROMOSOMAL[chr10:19.12Mb]""]"	chr10:103350983-chr10:84184831	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
PARVB--DKKL1P1	6	0	6.0	0.0	INCL_NON_REF_SPLICE	PARVB^ENSG00000188677.15	chr22:44094017:+	DKKL1P1^ENSG00000215546.2	chr20:31274402:+	LH00995:25:23T55JLT4:6:2183:3176:27357,LH00995:25:23T55JLT4:6:2262:43052:22943,LH00995:25:23T55JLT4:6:2416:37429:28030,LH00995:25:23T55JLT4:8:1104:42437:5428,LH00995:25:23T55JLT4:8:1467:44824:5694,LH00995:25:23T55JLT4:8:2370:25505:7404	.	NO_LDAS	0.0204	GT	1.9086	AG	1.4295	"[""INTERCHROMOSOMAL[chr22--chr20]""]"	chr22:44094017-chr20:31274402	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
GOLGA2--GOLGA2P4	6	0	6.0	0.0	INCL_NON_REF_SPLICE	GOLGA2^ENSG00000167110.18	chr9:128267934:-	GOLGA2P4^ENSG00000229608.1	chr22:42785003:+	LH00995:25:23T55JLT4:6:1115:44985:15335,LH00995:25:23T55JLT4:6:1301:21435:28688,LH00995:25:23T55JLT4:6:1377:31103:12504,LH00995:25:23T55JLT4:6:1466:32559:12700,LH00995:25:23T55JLT4:8:2394:33578:5638,LH00995:25:23T55JLT4:8:2486:33902:11271	.	NO_LDAS	0.0204	GT	1.5628	AG	1.8295	"[""INTERCHROMOSOMAL[chr9--chr22]""]"	chr9:128267934-chr22:42785003	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
ELAPOR2--TMEM243	6	0	6.0	0.0	ONLY_REF_SPLICE	ELAPOR2^ENSG00000164659.15	chr7:86897506:-	TMEM243^ENSG00000135185.12	chr7:87199057:-	LH00995:25:23T55JLT4:5:2180:46975:29319,LH00995:25:23T55JLT4:6:1208:21961:17408,LH00995:25:23T55JLT4:8:1125:39193:25367,LH00995:25:23T55JLT4:8:1339:21241:22691,LH00995:25:23T55JLT4:8:1494:37203:29207,LH00995:25:23T55JLT4:8:2205:17730:28100	.	YES_LDAS	0.0204	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.14Mb]""]"	chr7:86897506-chr7:87199057	False			0	Read count too low: 6 < 8	FAIL	6
DLGAP1--ANKRD30B	6	0	6.0	0.0	ONLY_REF_SPLICE	DLGAP1^ENSG00000170579.17	chr18:4151180:-	ANKRD30B^ENSG00000180777.14	chr18:14791401:+	LH00995:25:23T55JLT4:5:1431:24065:2808,LH00995:25:23T55JLT4:5:2153:8176:25507,LH00995:25:23T55JLT4:5:2438:23539:21430,LH00995:25:23T55JLT4:6:2369:38246:25465,LH00995:25:23T55JLT4:6:2423:24744:21248,LH00995:25:23T55JLT4:8:1101:18491:25157	.	YES_LDAS	0.0204	GT	1.6402	AG	1.9656	"[""INTRACHROMOSOMAL[chr18:10.27Mb]""]"	chr18:4151180-chr18:14791401	False			0	Read count too low: 6 < 8	FAIL	6
AC093895.1--SPARCL1	6	0	6.0	0.0	ONLY_REF_SPLICE	AC093895.1^ENSG00000249001.5	chr4:87672990:-	SPARCL1^ENSG00000152583.13	chr4:87499585:-	LH00995:25:23T55JLT4:5:2176:21363:2948,LH00995:25:23T55JLT4:6:1390:31168:26264,LH00995:25:23T55JLT4:6:2268:8111:17941,LH00995:25:23T55JLT4:6:2276:22932:17857,LH00995:25:23T55JLT4:6:2428:8815:25662,LH00995:25:23T55JLT4:8:2370:2286:21444	.	YES_LDAS	0.0204	GT	1.9656	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr4:0.04Mb]"",""NEIGHBORS[36974]""]"	chr4:87672990-chr4:87499585	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
AC005332.4--LRRC37A2	6	0	3.0	0.0	ONLY_REF_SPLICE	AC005332.4^ENSG00000274712.2	chr17:68206238:+	LRRC37A2^ENSG00000238083.8	chr17:46517362:+	LH00995:25:23T55JLT4:6:1166:25966:20897,LH00995:25:23T55JLT4:6:1397:18102:6801,LH00995:25:23T55JLT4:6:2144:17876:19356,LH00995:25:23T55JLT4:6:2207:14494:13275,LH00995:25:23T55JLT4:8:2139:3686:11509,LH00995:25:23T55JLT4:8:2239:40374:25956	.	YES_LDAS	0.0102	GT	1.7819	AG	1.7232	"[""INTRACHROMOSOMAL[chr17:21.65Mb]""]"	chr17:68206238-chr17:46517362	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
AGAP5--AC022400.4	6	1	6.0	0.4	INCL_NON_REF_SPLICE	AGAP5^ENSG00000172650.14	chr10:73692043:-	AC022400.4^ENSG00000272140.2	chr10:73713326:-	LH00995:25:23T55JLT4:2:1151:34986:20183,LH00995:25:23T55JLT4:2:1163:43570:9940,LH00995:25:23T55JLT4:5:1344:33457:16161,LH00995:25:23T55JLT4:5:2238:13410:10809,LH00995:25:23T55JLT4:6:1113:37114:19861,LH00995:25:23T55JLT4:8:2246:51732:25171	LH00995:25:23T55JLT4:5:1217:37656:10570	YES_LDAS	0.0218	GT	1.7465	AG	1.7819	"[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5854]""]"	chr10:73692043-chr10:73713326	False			0	Read count too low: 7 < 8	FAIL	7
BOLA2B--SMG1P2	5	0	5.0	0.0	ONLY_REF_SPLICE	BOLA2B^ENSG00000169627.9	chr16:30193358:-	SMG1P2^ENSG00000205534.6	chr16:29548762:-	LH00995:25:23T55JLT4:6:1303:7521:19973,LH00995:25:23T55JLT4:6:2157:13879:11846,LH00995:25:23T55JLT4:6:2432:22722:25592,LH00995:25:23T55JLT4:8:1442:12067:18964,LH00995:25:23T55JLT4:8:2204:16994:8721	.	YES_LDAS	0.017	GT	1.9329	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]"	chr16:30193358-chr16:29548762	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	5
BIRC2--AP000619.1	5	0	5.0	0.0	ONLY_REF_SPLICE	BIRC2^ENSG00000110330.8	chr11:102368548:+	AP000619.1^ENSG00000225678.2	chr11:102753855:-	LH00995:25:23T55JLT4:5:1197:36636:6591,LH00995:25:23T55JLT4:5:1364:23547:9814,LH00995:25:23T55JLT4:5:2234:11841:14844,LH00995:25:23T55JLT4:8:2142:31030:10949,LH00995:25:23T55JLT4:8:2428:16225:21990	.	YES_LDAS	0.017	GT	1.7968	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:0.37Mb]""]"	chr11:102368548-chr11:102753855	False			0	Read count too low: 5 < 8	FAIL	5
AP001347.1--ANKRD20A11P	5	1	5.0	0.17	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13979932:-	LH00995:25:23T55JLT4:6:1152:38991:7838,LH00995:25:23T55JLT4:6:1483:18410:21794,LH00995:25:23T55JLT4:6:2227:7189:11187,LH00995:25:23T55JLT4:8:1325:18814:14340,LH00995:25:23T55JLT4:8:2353:5676:16273	LH00995:25:23T55JLT4:8:2468:49168:26783	YES_LDAS	0.0176	GT	1.8323	AG	1.5628	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13979932	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	6
ACVR1--ACVR1C	5	1	5.0	1.0	INCL_NON_REF_SPLICE	ACVR1^ENSG00000115170.15	chr2:157737271:-	ACVR1C^ENSG00000123612.16	chr2:157587417:-	LH00995:25:23T55JLT4:5:2420:20052:21640,LH00995:25:23T55JLT4:6:1291:39306:1771,LH00995:25:23T55JLT4:6:2413:4301:27679,LH00995:25:23T55JLT4:8:1431:45171:23223,LH00995:25:23T55JLT4:8:2255:43926:9155	LH00995:25:23T55JLT4:8:2172:45527:16105	YES_LDAS	0.0204	GT	1.9656	AG	1.8256	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr2:0.11Mb]""]"	chr2:157737271-chr2:157587417	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
ZBED3-AS1--PDE8B	4	0	4.0	0.0	ONLY_REF_SPLICE	ZBED3-AS1^ENSG00000250802.7	chr5:77118521:+	PDE8B^ENSG00000113231.14	chr5:77311994:+	LH00995:25:23T55JLT4:5:1144:44387:19594,LH00995:25:23T55JLT4:5:1163:22139:15363,LH00995:25:23T55JLT4:8:1108:13459:7306,LH00995:25:23T55JLT4:8:2204:16881:3452	.	YES_LDAS	0.0136	GT	1.9329	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]"	chr5:77118521-chr5:77311994	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
TPTE2P4--AC013734.1	4	0	2.0	0.0	INCL_NON_REF_SPLICE	TPTE2P4^ENSG00000215506.5	chrY:26515708:+	AC013734.1^ENSG00000277146.1	chrY:26453985:+	LH00995:25:23T55JLT4:5:1269:44799:24513,LH00995:25:23T55JLT4:6:1472:46911:24807,LH00995:25:23T55JLT4:6:2140:41895:19566,LH00995:25:23T55JLT4:8:1308:37429:11131	.	YES_LDAS	0.0068	GT	1.8295	AG	1.8892	"[""INTRACHROMOSOMAL[chrY:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[54121]""]"	chrY:26515708-chrY:26453985	False			0	Read count too low: 4 < 8	FAIL	4
RPS3AP11--SEPTIN7	4	0	1.33	0.0	INCL_NON_REF_SPLICE	RPS3AP11^ENSG00000230116.1	chr1:42491744:+	SEPTIN7^ENSG00000122545.20	chr7:35832804:+	LH00995:25:23T55JLT4:5:1283:25052:29067,LH00995:25:23T55JLT4:5:1315:46482:13667,LH00995:25:23T55JLT4:6:1453:34331:26755,LH00995:25:23T55JLT4:6:2212:26144:23700	.	NO_LDAS	0.0045	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:42491744-chr7:35832804	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
LDLRAD3--PRR5L	4	0	4.0	0.0	ONLY_REF_SPLICE	LDLRAD3^ENSG00000179241.13	chr11:36098461:+	PRR5L^ENSG00000135362.14	chr11:36393846:+	LH00995:25:23T55JLT4:5:1429:7359:5372,LH00995:25:23T55JLT4:5:2286:34954:17100,LH00995:25:23T55JLT4:5:2297:15530:29081,LH00995:25:23T55JLT4:6:1313:41272:27539	.	YES_LDAS	0.0136	GT	1.9329	AG	1.8323	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[64152]""]"	chr11:36098461-chr11:36393846	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
AL139042.1--CNR1	4	0	4.0	0.0	ONLY_REF_SPLICE	AL139042.1^ENSG00000234426.3	chr6:88298861:-	CNR1^ENSG00000118432.12	chr6:88145337:-	LH00995:25:23T55JLT4:5:1246:20869:24485,LH00995:25:23T55JLT4:6:1479:1202:13345,LH00995:25:23T55JLT4:6:2392:33967:22229,LH00995:25:23T55JLT4:8:1378:6792:19748	.	YES_LDAS	0.0136	GT	1.4716	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[11445]""]"	chr6:88298861-chr6:88145337	False			0	Read count too low: 4 < 8	FAIL	4
AC112721.2--COL6A3	4	0	4.0	0.0	ONLY_REF_SPLICE	AC112721.2^ENSG00000222032.1	chr2:237433061:-	COL6A3^ENSG00000163359.16	chr2:237396847:-	LH00995:25:23T55JLT4:5:1389:32049:7642,LH00995:25:23T55JLT4:5:2191:9608:28856,LH00995:25:23T55JLT4:5:2307:12164:27203,LH00995:25:23T55JLT4:8:2298:18758:18922	.	YES_LDAS	0.0136	GT	1.9086	AG	1.7968	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[14713]""]"	chr2:237433061-chr2:237396847	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
AC112721.1--COL6A3	4	0	4.0	0.0	ONLY_REF_SPLICE	AC112721.1^ENSG00000222022.1	chr2:237425219:-	COL6A3^ENSG00000163359.16	chr2:237396847:-	LH00995:25:23T55JLT4:2:1119:26637:2023,LH00995:25:23T55JLT4:5:2284:15174:11846,LH00995:25:23T55JLT4:6:2142:3880:15573,LH00995:25:23T55JLT4:6:2296:12480:3873	.	YES_LDAS	0.0136	GT	1.8892	AG	1.7968	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[7213]""]"	chr2:237425219-chr2:237396847	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
AC112721.1--COL6A3	4	0	4.0	0.0	ONLY_REF_SPLICE	AC112721.1^ENSG00000222022.1	chr2:237422125:-	COL6A3^ENSG00000163359.16	chr2:237396847:-	LH00995:25:23T55JLT4:5:1332:28878:25522,LH00995:25:23T55JLT4:5:1348:46086:17633,LH00995:25:23T55JLT4:5:1397:10789:17675,LH00995:25:23T55JLT4:8:2148:51757:13835	.	YES_LDAS	0.0136	GT	1.8892	AG	1.7968	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[7213]""]"	chr2:237422125-chr2:237396847	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
AC091132.4--AC091132.1	4	0	1.0	0.0	INCL_NON_REF_SPLICE	AC091132.4^ENSG00000267198.1	chr17:45545944:+	AC091132.1^ENSG00000131484.4	chr17:45534200:+	LH00995:25:23T55JLT4:5:2362:3791:12952,LH00995:25:23T55JLT4:5:2366:34080:6759,LH00995:25:23T55JLT4:5:2409:41426:6030,LH00995:25:23T55JLT4:8:1412:28999:22481	.	YES_LDAS	0.0034	GT	1.5329	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11094]""]"	chr17:45545944-chr17:45534200	False			0	Read count too low: 4 < 8	FAIL	4
AC044810.2--OVCH2	4	0	4.0	0.0	ONLY_REF_SPLICE	AC044810.2^ENSG00000254951.7	chr11:7879007:-	OVCH2^ENSG00000183378.12	chr11:7704674:-	LH00995:25:23T55JLT4:6:1221:6113:8230,LH00995:25:23T55JLT4:6:1309:13904:22453,LH00995:25:23T55JLT4:6:1424:7690:29459,LH00995:25:23T55JLT4:8:2107:1979:6227	.	YES_LDAS	0.0136	GT	1.7056	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.05Mb]"",""NEIGHBORS[47972]""]"	chr11:7879007-chr11:7704674	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
AC005332.4--LRRC37A2	4	0	1.25	0.0	ONLY_REF_SPLICE	AC005332.4^ENSG00000274712.2	chr17:68206238:+	LRRC37A2^ENSG00000238083.8	chr17:46548312:+	LH00995:25:23T55JLT4:5:1212:43278:27960,LH00995:25:23T55JLT4:5:2458:14535:11243,LH00995:25:23T55JLT4:6:1373:3273:22453,LH00995:25:23T55JLT4:6:2131:26985:17955	.	YES_LDAS	0.0042	GT	1.7819	AG	1.9086	"[""INTRACHROMOSOMAL[chr17:21.65Mb]""]"	chr17:68206238-chr17:46548312	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
ZNF720--AC098826.1	3	0	0.5	0.0	ONLY_REF_SPLICE	ZNF720^ENSG00000197302.10	chr16:31723353:+	AC098826.1^ENSG00000225594.1	chr2:132087289:+	LH00995:25:23T55JLT4:5:1390:22430:3256,LH00995:25:23T55JLT4:5:1461:15886:18319,LH00995:25:23T55JLT4:8:2472:45988:9786	.	NO_LDAS	0.0017	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr2]""]"	chr16:31723353-chr2:132087289	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
TRIO--OPN4	3	0	3.0	0.0	INCL_NON_REF_SPLICE	TRIO^ENSG00000038382.20	chr5:14304592:+	OPN4^ENSG00000122375.12	chr10:86666456:+	LH00995:25:23T55JLT4:2:1128:14583:25115,LH00995:25:23T55JLT4:6:2111:1356:28688,LH00995:25:23T55JLT4:8:1372:6525:3480	.	NO_LDAS	0.0102	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chr5--chr10]""]"	chr5:14304592-chr10:86666456	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
TPTE--BAGE2	3	0	1.5	0.0	ONLY_REF_SPLICE	TPTE^ENSG00000274391.5	chr21:10552716:+	BAGE2^ENSG00000187172.15	chr21:10514122:+	LH00995:25:23T55JLT4:5:2275:37583:25129,LH00995:25:23T55JLT4:5:2394:36798:4545,LH00995:25:23T55JLT4:6:1178:2246:28184	.	YES_LDAS	0.0051	GT	1.8295	AG	1.7819	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5122]""]"	chr21:10552716-chr21:10514122	False			0	Read count too low: 3 < 8	FAIL	3
RRBP1--AC091044.1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	RRBP1^ENSG00000125844.16	chr20:17660073:-	AC091044.1^ENSG00000267196.1	chr18:49970952:-	LH00995:25:23T55JLT4:5:2121:34323:23462,LH00995:25:23T55JLT4:6:1133:19712:2864,LH00995:25:23T55JLT4:6:1269:2214:18207	.	NO_LDAS	0.0102	GT	0.8366	AG	1.7056	"[""INTERCHROMOSOMAL[chr20--chr18]""]"	chr20:17660073-chr18:49970952	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
PRR16--AC114284.1	3	0	3.0	0.0	ONLY_REF_SPLICE	PRR16^ENSG00000184838.15	chr5:120464645:+	AC114284.1^ENSG00000248927.1	chr5:120789954:+	LH00995:25:23T55JLT4:6:2413:31265:22397,LH00995:25:23T55JLT4:8:1475:40916:18039,LH00995:25:23T55JLT4:8:2251:43934:5414	.	YES_LDAS	0.0102	GT	1.6895	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.09Mb]"",""NEIGHBORS[93886]""]"	chr5:120464645-chr5:120789954	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
PICALM--AC008132.1	3	0	0.6	0.0	INCL_NON_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85981745:-	AC008132.1^ENSG00000161103.11	chr22:18859264:+	LH00995:25:23T55JLT4:6:1471:24817:18515,LH00995:25:23T55JLT4:6:2376:8232:18039,LH00995:25:23T55JLT4:8:2442:5352:14003	.	NO_LDAS	0.002	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chr11--chr22]""]"	chr11:85981745-chr22:18859264	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
NCOR1--AC108156.1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	NCOR1^ENSG00000141027.21	chr17:16146495:-	AC108156.1^ENSG00000249752.1	chr4:149062506:-	LH00995:25:23T55JLT4:5:1105:14842:2135,LH00995:25:23T55JLT4:5:1218:29566:20939,LH00995:25:23T55JLT4:6:1293:32616:23195	.	NO_LDAS	0.0102	GT	1.5329	AG	1.6895	"[""INTERCHROMOSOMAL[chr17--chr4]""]"	chr17:16146495-chr4:149062506	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
AC098590.2--HLA-DPB1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	AC098590.2^ENSG00000277096.1	chr4:43388438:+	HLA-DPB1^ENSG00000223865.11	chr6:33085779:+	LH00995:25:23T55JLT4:5:1253:47299:26208,LH00995:25:23T55JLT4:5:2329:47331:16484,LH00995:25:23T55JLT4:8:2428:4810:26657	.	YES_LDAS	0.0102	GT	1.9329	AG	1.9899	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:43388438-chr6:33085779	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
AC009315.1--FSIP2	3	0	3.0	0.0	ONLY_REF_SPLICE	AC009315.1^ENSG00000286797.1	chr2:185483091:+	FSIP2^ENSG00000188738.15	chr2:185739346:+	LH00995:25:23T55JLT4:5:1331:36062:15993,LH00995:25:23T55JLT4:5:1363:8839:17661,LH00995:25:23T55JLT4:5:2224:48707:12672	.	YES_LDAS	0.0102	GT	1.7968	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.23Mb]""]"	chr2:185483091-chr2:185739346	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
ELAPOR2--TMEM243	3	1	3.0	1.0	INCL_NON_REF_SPLICE	ELAPOR2^ENSG00000164659.15	chr7:86897506:-	TMEM243^ENSG00000135185.12	chr7:87206742:-	LH00995:25:23T55JLT4:5:2180:35706:28772,LH00995:25:23T55JLT4:6:1425:8588:5092,LH00995:25:23T55JLT4:8:1348:50203:21654	LH00995:25:23T55JLT4:5:1156:23612:3508	YES_LDAS	0.0136	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.14Mb]""]"	chr7:86897506-chr7:87206742	False			0	Read count too low: 4 < 8	FAIL	4
AP001347.1--ANKRD20A11P	3	1	3.0	0.1	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13979884:-	LH00995:25:23T55JLT4:5:2407:14219:21206,LH00995:25:23T55JLT4:6:2220:47283:23069,LH00995:25:23T55JLT4:8:1410:25885:4587	LH00995:25:23T55JLT4:8:2468:49168:26783	YES_LDAS	0.0105	GT	1.8323	AG	1.5656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13979884	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	4
AP001347.1--ANKRD20A11P	3	1	3.0	0.1	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13972057:-	LH00995:25:23T55JLT4:5:2471:43626:5274,LH00995:25:23T55JLT4:6:1291:51797:25648,LH00995:25:23T55JLT4:6:1340:3071:29333	LH00995:25:23T55JLT4:8:2468:49168:26783	YES_LDAS	0.0105	GT	1.8323	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13972057	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	4
AP001347.1--ANKRD20A11P	3	1	3.0	0.1	INCL_NON_REF_SPLICE	AP001347.1^ENSG00000224905.7	chr21:14027597:+	ANKRD20A11P^ENSG00000215559.8	chr21:13954147:-	LH00995:25:23T55JLT4:6:2248:12108:11411,LH00995:25:23T55JLT4:6:2349:28619:9968,LH00995:25:23T55JLT4:8:2456:29663:24863	LH00995:25:23T55JLT4:8:2468:49168:26783	YES_LDAS	0.0105	GT	1.8323	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.05Mb]"",""LOCAL_INVERSION:+:-:[46982]""]"	chr21:14027597-chr21:13954147	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	4
ZNF75D--AC234771.4	2	0	1.0	0.0	ONLY_REF_SPLICE	ZNF75D^ENSG00000186376.15	chrX:135343261:-	AC234771.4^ENSG00000236491.1	chrX:135193082:-	LH00995:25:23T55JLT4:8:1192:32494:4405,LH00995:25:23T55JLT4:8:2473:19275:14073	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9899	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.05Mb]"",""NEIGHBORS[54241]""]"	chrX:135343261-chrX:135193082	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
ZNF37BP--ZFP1	2	0	2.0	0.0	ONLY_REF_SPLICE	ZNF37BP^ENSG00000234420.7	chr10:42525540:-	ZFP1^ENSG00000184517.12	chr16:75166770:+	LH00995:25:23T55JLT4:5:2344:48270:19678,LH00995:25:23T55JLT4:8:1327:41943:10542	.	YES_LDAS	0.0068	GT	1.9329	AG	1.9219	"[""INTERCHROMOSOMAL[chr10--chr16]""]"	chr10:42525540-chr16:75166770	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
ZBED3-AS1--PDE8B	2	0	2.0	0.0	INCL_NON_REF_SPLICE	ZBED3-AS1^ENSG00000250802.7	chr5:77118521:+	PDE8B^ENSG00000113231.14	chr5:77311997:+	LH00995:25:23T55JLT4:8:1463:27770:2443,LH00995:25:23T55JLT4:8:2473:42356:20841	.	YES_LDAS	0.0068	GT	1.9329	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]"	chr5:77118521-chr5:77311997	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
UBE2Q2P1--GOLGA6L10	2	0	1.0	0.0	ONLY_REF_SPLICE	UBE2Q2P1^ENSG00000189136.9	chr15:84526781:-	GOLGA6L10^ENSG00000278662.5	chr15:82347629:-	LH00995:25:23T55JLT4:6:1449:1485:25858,LH00995:25:23T55JLT4:8:1368:1259:24148	.	YES_LDAS	0.0034	GT	1.8323	AG	1.7819	"[""INTRACHROMOSOMAL[chr15:2.18Mb]""]"	chr15:84526781-chr15:82347629	False			0	Read count too low: 2 < 8	FAIL	2
TPM3--KCNT1	2	0	0.67	0.0	INCL_NON_REF_SPLICE	TPM3^ENSG00000143549.21	chr1:154176113:-	KCNT1^ENSG00000107147.14	chr9:135736675:+	LH00995:25:23T55JLT4:5:1378:38659:8553,LH00995:25:23T55JLT4:6:1123:32244:17030	.	NO_LDAS	0.0023	GT	1.5058	AG	0.9183	"[""INTERCHROMOSOMAL[chr1--chr9]""]"	chr1:154176113-chr9:135736675	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
TEX21P--ZNF517	2	0	2.0	0.0	ONLY_REF_SPLICE	TEX21P^ENSG00000234911.2	chr14:64353953:-	ZNF517^ENSG00000197363.9	chr8:144802870:+	LH00995:25:23T55JLT4:5:1228:44500:23798,LH00995:25:23T55JLT4:5:2137:6623:21360	.	YES_LDAS	0.0068	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr14--chr8]""]"	chr14:64353953-chr8:144802870	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
SEPTIN14--AP006222.1	2	0	1.0	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AP006222.1^ENSG00000228463.10	chr1:297502:-	LH00995:25:23T55JLT4:5:1494:3047:7992,LH00995:25:23T55JLT4:6:1307:42720:17436	.	YES_LDAS	0.0034	GT	1.5546	AG	1.9086	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:55795924-chr1:297502	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
SEPTIN14--AP006222.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AP006222.1^ENSG00000228463.10	chr1:289370:-	LH00995:25:23T55JLT4:6:2343:47000:25353,LH00995:25:23T55JLT4:8:2329:4244:25451	.	YES_LDAS	0.0068	GT	1.5546	AG	1.7968	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:55795924-chr1:289370	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
SEPTIN14--AL031259.1	2	0	1.0	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AL031259.1^ENSG00000287411.1	chr6:170614324:+	LH00995:25:23T55JLT4:5:1494:3047:7992,LH00995:25:23T55JLT4:6:1307:42720:17436	.	YES_LDAS	0.0034	GT	1.5546	AG	1.9086	"[""INTERCHROMOSOMAL[chr7--chr6]""]"	chr7:55795924-chr6:170614324	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
ROCK1P1--IGL-@-ext	2	0	2.0	0.0	INCL_NON_REF_SPLICE	ROCK1P1^ENSG00000263006.6	chr18:118577:+	IGL-@-ext^IGL-.g@-ext	chr22:22131483:-	LH00995:25:23T55JLT4:5:2123:42623:19314,LH00995:25:23T55JLT4:6:2160:51910:28730	.	NO_LDAS	0.0068	AA	1.6402	TT	1.9086	"[""INTERCHROMOSOMAL[chr18--chr22]""]"	chr18:118577-chr22:22131483	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
RGPD8--VINAC1P	2	0	1.0	0.0	ONLY_REF_SPLICE	RGPD8^ENSG00000169629.12	chr2:112378053:-	VINAC1P^ENSG00000283698.1	chr2:112440611:-	LH00995:25:23T55JLT4:6:1265:22406:13975,LH00995:25:23T55JLT4:6:1447:29202:22523	.	YES_LDAS	0.0034	GT	1.9329	AG	1.6895	"[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4824]""]"	chr2:112378053-chr2:112440611	False			0	Read count too low: 2 < 8	FAIL	2
PCMTD1--PXDNL	2	0	2.0	0.0	ONLY_REF_SPLICE	PCMTD1^ENSG00000168300.14	chr8:51860845:-	PXDNL^ENSG00000147485.13	chr8:51654760:-	LH00995:25:23T55JLT4:8:1236:12739:28086,LH00995:25:23T55JLT4:8:2219:42672:28730	.	YES_LDAS	0.0068	GT	1.7465	AG	1.8256	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[8130]""]"	chr8:51860845-chr8:51654760	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
NPM1P31--NPM1P4	2	0	2.0	0.0	INCL_NON_REF_SPLICE	NPM1P31^ENSG00000214807.2	chr10:124867902:+	NPM1P4^ENSG00000226703.1	chr13:27696868:-	LH00995:25:23T55JLT4:5:1493:38659:27413,LH00995:25:23T55JLT4:8:1243:45099:8188	.	NO_LDAS	0.0068	GT	1.2867	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr13]""]"	chr10:124867902-chr13:27696868	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
IGL-@-ext--PPM1F-AS1	2	0	1.0	0.0	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22906342:-	PPM1F-AS1^ENSG00000224086.6	chr22:21974013:+	LH00995:25:23T55JLT4:5:2170:4891:7684,LH00995:25:23T55JLT4:8:1172:51166:6114	.	NO_LDAS	0.0034	CT	1.9086	AC	1.9656	"[""INTRACHROMOSOMAL[chr22:0.05Mb]"",""LOCAL_INVERSION:-:+:[53302]""]"	chr22:22906342-chr22:21974013	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
IGL-@-ext--PPM1F-AS1	2	0	1.0	0.0	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22900976:-	PPM1F-AS1^ENSG00000224086.6	chr22:21974013:+	LH00995:25:23T55JLT4:5:2170:4891:7684,LH00995:25:23T55JLT4:8:1172:51166:6114	.	NO_LDAS	0.0034	CT	1.9086	AC	1.9656	"[""INTRACHROMOSOMAL[chr22:0.05Mb]"",""LOCAL_INVERSION:-:+:[53302]""]"	chr22:22900976-chr22:21974013	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
HRC--USH2A	2	0	2.0	0.0	INCL_NON_REF_SPLICE	HRC^ENSG00000130528.12	chr19:49154455:-	USH2A^ENSG00000042781.14	chr1:215634501:-	LH00995:25:23T55JLT4:6:2134:29145:4153,LH00995:25:23T55JLT4:8:2421:49322:7123	.	NO_LDAS	0.0068	GT	1.585	AG	1.9656	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:49154455-chr1:215634501	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
HNRNPKP3--CACNB2	2	0	2.0	0.0	INCL_NON_REF_SPLICE	HNRNPKP3^ENSG00000251557.2	chr11:43261684:-	CACNB2^ENSG00000165995.22	chr10:18541050:+	LH00995:25:23T55JLT4:5:2186:49775:11579,LH00995:25:23T55JLT4:8:1366:34606:25522	.	NO_LDAS	0.0068	GT	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr10]""]"	chr11:43261684-chr10:18541050	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
GOLGA2--GOLGA2P6	2	0	2.0	0.0	INCL_NON_REF_SPLICE	GOLGA2^ENSG00000167110.18	chr9:128257601:-	GOLGA2P6^ENSG00000241621.1	chr10:30364862:-	LH00995:25:23T55JLT4:8:1272:27357:13163,LH00995:25:23T55JLT4:8:2458:50729:26012	.	YES_LDAS	0.0068	GT	1.2867	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr10]""]"	chr9:128257601-chr10:30364862	False			0	Read count too low: 2 < 8	FAIL	2
DDR1-DT--REST	2	0	2.0	0.0	INCL_NON_REF_SPLICE	DDR1-DT^ENSG00000237775.1	chr6:30874982:-	REST^ENSG00000084093.19	chr4:56919787:+	LH00995:25:23T55JLT4:5:1388:39144:14017,LH00995:25:23T55JLT4:6:2383:16015:1869	.	YES_LDAS	0.0068	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr4]""]"	chr6:30874982-chr4:56919787	False			0	Read count too low: 2 < 8	FAIL	2
CKAP4--C5orf49	2	0	2.0	0.0	INCL_NON_REF_SPLICE	CKAP4^ENSG00000136026.14	chr12:106239165:-	C5orf49^ENSG00000215217.7	chr5:7850973:-	LH00995:25:23T55JLT4:5:1402:47938:23840,LH00995:25:23T55JLT4:6:1325:18725:17380	.	NO_LDAS	0.0068	GT	1.9899	AG	1.1589	"[""INTERCHROMOSOMAL[chr12--chr5]""]"	chr12:106239165-chr5:7850973	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
C10orf71--PTMS	2	0	1.0	0.0	INCL_NON_REF_SPLICE	C10orf71^ENSG00000177354.12	chr10:49325741:+	PTMS^ENSG00000159335.18	chr12:6769927:+	LH00995:25:23T55JLT4:5:1186:22026:14746,LH00995:25:23T55JLT4:6:2339:25529:6689	.	NO_LDAS	0.0034	GT	1.5219	AG	1.6402	"[""INTERCHROMOSOMAL[chr10--chr12]""]"	chr10:49325741-chr12:6769927	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
BX842568.2--AL592156.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	BX842568.2^ENSG00000231069.1	chrX:36964246:-	AL592156.1^ENSG00000286475.1	chrX:36817653:-	LH00995:25:23T55JLT4:5:1397:47663:21066,LH00995:25:23T55JLT4:6:1216:46215:28450	.	YES_LDAS	0.0068	GT	1.0389	AG	1.8892	"[""INTRACHROMOSOMAL[chrX:0.12Mb]""]"	chrX:36964246-chrX:36817653	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AL390957.1--RPAP2	2	0	2.0	0.0	ONLY_REF_SPLICE	AL390957.1^ENSG00000285280.2	chr1:192925612:-	RPAP2^ENSG00000122484.9	chr1:92333391:+	LH00995:25:23T55JLT4:2:1165:18911:18207,LH00995:25:23T55JLT4:8:1140:31426:18922	.	NO_LDAS	0.0068	GT	1.7819	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:99.77Mb]""]"	chr1:192925612-chr1:92333391	False			0	Read count too low: 2 < 8	FAIL	2
ACTR3C--AC092681.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	ACTR3C^ENSG00000106526.10	chr7:150284753:-	AC092681.1^ENSG00000224016.2	chr7:149909705:-	LH00995:25:23T55JLT4:5:2213:24655:11537,LH00995:25:23T55JLT4:8:2443:14996:17703	.	YES_LDAS	0.0068	GT	1.9899	AG	1.9899	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]"	chr7:150284753-chr7:149909705	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC091057.4--AC091057.6	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	AC091057.6^ENSG00000285035.1	chr15:30716220:+	LH00995:25:23T55JLT4:5:1468:21589:22453,LH00995:25:23T55JLT4:6:1154:43036:19440	.	YES_LDAS	0.0068	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26911]""]"	chr15:30750556-chr15:30716220	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC016907.2--ALK	2	0	2.0	0.0	ONLY_REF_SPLICE	AC016907.2^ENSG00000233862.7	chr2:30119768:-	ALK^ENSG00000171094.18	chr2:29717697:-	LH00995:25:23T55JLT4:6:1201:43748:19945,LH00995:25:23T55JLT4:8:2406:30739:16105	.	YES_LDAS	0.0068	GT	1.8062	AG	1.9329	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.13Mb]""]"	chr2:30119768-chr2:29717697	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC004784.1--CD177	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC004784.1^ENSG00000282943.1	chr19:43137698:+	CD177^ENSG00000204936.10	chr19:43354207:+	LH00995:25:23T55JLT4:6:2110:50964:20589,LH00995:25:23T55JLT4:8:1422:41434:20954	.	YES_LDAS	0.0068	GT	1.9086	AG	1.8062	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:0.18Mb]""]"	chr19:43137698-chr19:43354207	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
ZNF93--PBK	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF93^ENSG00000184635.16	chr19:19901091:+	PBK^ENSG00000168078.10	chr8:27833133:-	LH00995:25:23T55JLT4:8:2273:47048:1364	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr8]""]"	chr19:19901091-chr8:27833133	False			0	Read count too low: 1 < 8	FAIL	1
ZNF736P9Y--ZNF611	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF736P9Y^ENSG00000239893.2	chrY:8111850:-	ZNF611^ENSG00000213020.10	chr19:52706864:-	LH00995:25:23T55JLT4:8:1197:15683:17156	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""INTERCHROMOSOMAL[chrY--chr19]""]"	chrY:8111850-chr19:52706864	False			0	Read count too low: 1 < 8	FAIL	1
ZNF730--AC012358.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF730^ENSG00000183850.14	chr19:23143980:+	AC012358.2^ENSG00000240401.9	chr2:55308925:+	LH00995:25:23T55JLT4:8:2170:27778:27848	.	NO_LDAS	0.0034	GT	1.7819	AG	1.6895	"[""INTERCHROMOSOMAL[chr19--chr2]""]"	chr19:23143980-chr2:55308925	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF695--ABHD12B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF695^ENSG00000197472.15	chr1:246999348:-	ABHD12B^ENSG00000131969.15	chr14:50891971:+	LH00995:25:23T55JLT4:5:2145:24874:9505	.	NO_LDAS	0.0034	GT	1.7819	AG	1.3753	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:246999348-chr14:50891971	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF550--ZNF611	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF550^ENSG00000251369.9	chr19:57552627:-	ZNF611^ENSG00000213020.10	chr19:52715913:-	LH00995:25:23T55JLT4:6:2334:16695:8455	.	NO_LDAS	0.0034	GT	1.9899	AG	1.9086	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:4.80Mb]""]"	chr19:57552627-chr19:52715913	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF493--FAM122C	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF493^ENSG00000196268.12	chr19:21405856:+	FAM122C^ENSG00000156500.15	chrX:134845205:+	LH00995:25:23T55JLT4:6:1131:12035:1252	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8323	"[""INTERCHROMOSOMAL[chr19--chrX]""]"	chr19:21405856-chrX:134845205	False			0	Read count too low: 1 < 8	FAIL	1
ZNF460-AS1--ZNF550	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF460-AS1^ENSG00000267871.6	chr19:57280279:-	ZNF550^ENSG00000251369.9	chr19:57552722:-	LH00995:25:23T55JLT4:8:2336:1849:25367	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9086	"[""INTRACHROMOSOMAL[chr19:0.25Mb]""]"	chr19:57280279-chr19:57552722	False			0	Read count too low: 1 < 8	FAIL	1
ZNF44--ATAD3C	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF44^ENSG00000197857.15	chr19:12293232:-	ATAD3C^ENSG00000215915.10	chr1:1450681:+	LH00995:25:23T55JLT4:6:1252:2036:18235	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:12293232-chr1:1450681	False			0	Read count too low: 1 < 8	FAIL	1
ZNF433-AS1--ZNF543	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF433-AS1^ENSG00000219665.8	chr19:12001822:+	ZNF543^ENSG00000178229.8	chr19:57323682:+	LH00995:25:23T55JLT4:8:1339:1332:9842	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7465	"[""INTRACHROMOSOMAL[chr19:45.27Mb]""]"	chr19:12001822-chr19:57323682	False			0	Read count too low: 1 < 8	FAIL	1
ZNF35--ZNF197	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF35^ENSG00000169981.11	chr3:44660129:+	ZNF197^ENSG00000186448.15	chr3:44646491:+	LH00995:25:23T55JLT4:6:2281:22309:24120	.	YES_LDAS	0.0034	GT	1.053	AG	1.8295	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[261]""]"	chr3:44660129-chr3:44646491	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ZNF235--AP1AR	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF235^ENSG00000159917.17	chr19:44298808:-	AP1AR^ENSG00000138660.12	chr4:112253208:+	LH00995:25:23T55JLT4:8:2454:3378:1196	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8323	"[""INTERCHROMOSOMAL[chr19--chr4]""]"	chr19:44298808-chr4:112253208	False			0	Read count too low: 1 < 8	FAIL	1
ZNF14--AC011487.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ZNF14^ENSG00000105708.9	chr19:19732956:-	AC011487.1^ENSG00000213777.5	chr19:53503656:+	LH00995:25:23T55JLT4:5:1255:39055:16077	.	YES_LDAS	0.0017	GT	1.7968	AG	1.7465	"[""INTRACHROMOSOMAL[chr19:33.77Mb]""]"	chr19:19732956-chr19:53503656	False			0	Read count too low: 1 < 8	FAIL	1
ZNF138--TOX	1	0	0.2	0.0	ONLY_REF_SPLICE	ZNF138^ENSG00000197008.10	chr7:64794571:+	TOX^ENSG00000198846.6	chr8:58960008:-	LH00995:25:23T55JLT4:8:1206:23328:15321	.	NO_LDAS	0.0007	GT	1.8323	AG	1.9329	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:64794571-chr8:58960008	False			0	Read count too low: 1 < 8	FAIL	1
ZNF114--BBS4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF114^ENSG00000178150.10	chr19:48286267:+	BBS4^ENSG00000140463.14	chr15:72736877:+	LH00995:25:23T55JLT4:6:1261:45503:9870	.	YES_LDAS	0.0034	AT	1.8256	AC	1.8892	"[""INTERCHROMOSOMAL[chr19--chr15]""]"	chr19:48286267-chr15:72736877	False			0	Read count too low: 1 < 8	FAIL	1
ZFP28--ZNF577	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZFP28^ENSG00000196867.8	chr19:56555033:+	ZNF577^ENSG00000161551.14	chr19:51873288:-	LH00995:25:23T55JLT4:6:1268:10126:25437	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:4.65Mb]""]"	chr19:56555033-chr19:51873288	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZFAND4--CDIN1	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFAND4^ENSG00000172671.20	chr10:45663542:-	CDIN1^ENSG00000186073.14	chr15:36808324:+	LH00995:25:23T55JLT4:6:1229:4365:19720	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9086	"[""INTERCHROMOSOMAL[chr10--chr15]""]"	chr10:45663542-chr15:36808324	False			0	Read count too low: 1 < 8	FAIL	1
ZEB2-AS1--RPL6P27	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZEB2-AS1^ENSG00000238057.10	chr2:144520021:+	RPL6P27^ENSG00000235552.4	chr18:6462994:-	LH00995:25:23T55JLT4:5:2453:27228:14676	.	NO_LDAS	0.0034	GT	1.2729	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr18]""]"	chr2:144520021-chr18:6462994	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZBTB8A--GZMH	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZBTB8A^ENSG00000160062.15	chr1:32604014:+	GZMH^ENSG00000100450.13	chr14:24607279:-	LH00995:25:23T55JLT4:8:2131:27996:27581	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:32604014-chr14:24607279	False			0	Read count too low: 1 < 8	FAIL	1
ZBTB46--ASTN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZBTB46^ENSG00000130584.12	chr20:63744908:-	ASTN1^ENSG00000152092.16	chr1:177032523:-	LH00995:25:23T55JLT4:5:2188:37931:16035	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chr20--chr1]""]"	chr20:63744908-chr1:177032523	False			0	Read count too low: 1 < 8	FAIL	1
ZBED3-AS1--PDE8B	1	0	1.0	0.0	ONLY_REF_SPLICE	ZBED3-AS1^ENSG00000250802.7	chr5:77165500:+	PDE8B^ENSG00000113231.14	chr5:77311994:+	LH00995:25:23T55JLT4:8:2481:39403:7880	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]"	chr5:77165500-chr5:77311994	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
Z93930.2--PFKFB2	1	0	1.0	0.0	ONLY_REF_SPLICE	Z93930.2^ENSG00000226471.6	chr22:28800737:+	PFKFB2^ENSG00000123836.15	chr1:207054701:+	LH00995:25:23T55JLT4:8:2189:15894:13793	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTERCHROMOSOMAL[chr22--chr1]""]"	chr22:28800737-chr1:207054701	False			0	Read count too low: 1 < 8	FAIL	1
Z92544.1--AC132153.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	Z92544.1^ENSG00000261659.2	chr16:689403:+	AC132153.1^ENSG00000285755.2	chr2:57291429:-	LH00995:25:23T55JLT4:6:1438:30973:1126	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr16--chr2]""]"	chr16:689403-chr2:57291429	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
XRCC6P1--CNGB1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	XRCC6P1^ENSG00000237417.1	chr10:93208645:-	CNGB1^ENSG00000070729.14	chr16:57937129:-	LH00995:25:23T55JLT4:6:2359:44629:15110	.	NO_LDAS	0.0017	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr10--chr16]""]"	chr10:93208645-chr16:57937129	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
XKR9--AC022858.1	1	0	1.0	0.0	ONLY_REF_SPLICE	XKR9^ENSG00000221947.8	chr8:70707153:+	AC022858.1^ENSG00000254031.6	chr8:71199140:+	LH00995:25:23T55JLT4:6:1346:7051:18824	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9219	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.37Mb]""]"	chr8:70707153-chr8:71199140	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
XKR9--AC022858.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	XKR9^ENSG00000221947.8	chr8:70779476:+	AC022858.1^ENSG00000254031.6	chr8:71199140:+	LH00995:25:23T55JLT4:8:1102:24437:15587	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9219	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.37Mb]""]"	chr8:70779476-chr8:71199140	False			0	Read count too low: 1 < 8	FAIL	1
VCAN-AS1--SERINC4	1	0	0.5	0.0	INCL_NON_REF_SPLICE	VCAN-AS1^ENSG00000249835.2	chr5:83581148:-	SERINC4^ENSG00000184716.13	chr15:43795799:-	LH00995:25:23T55JLT4:8:2437:38497:19987	.	YES_LDAS	0.0017	GT	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr5--chr15]""]"	chr5:83581148-chr15:43795799	False			0	Read count too low: 1 < 8	FAIL	1
VAMP4--DNM3	1	0	1.0	0.0	ONLY_REF_SPLICE	VAMP4^ENSG00000117533.15	chr1:171728524:-	DNM3^ENSG00000197959.14	chr1:172131175:+	LH00995:25:23T55JLT4:8:2406:13936:7460	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8295	"[""INTRACHROMOSOMAL[chr1:0.10Mb]"",""LOCAL_INVERSION:-:+:[99424]""]"	chr1:171728524-chr1:172131175	False			0	Read count too low: 1 < 8	FAIL	1
TXNP1--TXNP5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TXNP1^ENSG00000232823.2	chr10:119683613:-	TXNP5^ENSG00000228236.2	chr2:149068741:-	LH00995:25:23T55JLT4:6:1260:35819:28548	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr10--chr2]""]"	chr10:119683613-chr2:149068741	False			0	Read count too low: 1 < 8	FAIL	1
TUFT1--EOGT	1	0	1.0	0.0	ONLY_REF_SPLICE	TUFT1^ENSG00000143367.16	chr1:151564614:+	EOGT^ENSG00000163378.14	chr3:68987513:-	LH00995:25:23T55JLT4:6:1128:7577:23434	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7465	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:151564614-chr3:68987513	False			0	Read count too low: 1 < 8	FAIL	1
TTC13--ECI1	1	0	1.0	0.0	ONLY_REF_SPLICE	TTC13^ENSG00000143643.13	chr1:230978560:-	ECI1^ENSG00000167969.13	chr16:2246986:-	LH00995:25:23T55JLT4:6:2401:50042:19216	.	YES_LDAS	0.0034	GT	1.6895	AG	1.7968	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:230978560-chr16:2246986	False			0	Read count too low: 1 < 8	FAIL	1
TRMT11--CENPW	1	0	1.0	0.0	ONLY_REF_SPLICE	TRMT11^ENSG00000066651.20	chr6:126174911:+	CENPW^ENSG00000203760.9	chr6:126346205:+	LH00995:25:23T55JLT4:5:2230:1696:14087	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.14Mb]""]"	chr6:126174911-chr6:126346205	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
TPTE2P4--AC136428.3	1	0	0.14	0.0	ONLY_REF_SPLICE	TPTE2P4^ENSG00000215506.5	chrY:26515708:+	AC136428.3^ENSG00000282924.1	chr16:33743850:-	LH00995:25:23T55JLT4:6:2279:32397:1911	.	NO_LDAS	0.0005	GT	1.8295	AG	1.9329	"[""INTERCHROMOSOMAL[chrY--chr16]""]"	chrY:26515708-chr16:33743850	False			0	Read count too low: 1 < 8	FAIL	1
TPTE2P4--AC136428.3	1	0	0.14	0.0	ONLY_REF_SPLICE	TPTE2P4^ENSG00000215506.5	chrY:26515708:+	AC136428.3^ENSG00000282924.1	chr16:33741976:-	LH00995:25:23T55JLT4:6:2279:32397:1911	.	NO_LDAS	0.0005	GT	1.8295	AG	1.9329	"[""INTERCHROMOSOMAL[chrY--chr16]""]"	chrY:26515708-chr16:33741976	False			0	Read count too low: 1 < 8	FAIL	1
TPTE2P4--AC013734.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	TPTE2P4^ENSG00000215506.5	chrY:26534484:+	AC013734.1^ENSG00000277146.1	chrY:26453985:+	LH00995:25:23T55JLT4:5:1189:45188:17871	.	YES_LDAS	0.0011	GT	1.585	AG	1.8892	"[""INTRACHROMOSOMAL[chrY:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[54121]""]"	chrY:26534484-chrY:26453985	False			0	Read count too low: 1 < 8	FAIL	1
TPTE2P4--AC007326.5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TPTE2P4^ENSG00000215506.5	chrY:26515690:+	AC007326.5^ENSG00000284294.1	chr22:18939448:+	LH00995:25:23T55JLT4:8:1371:1113:13723	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5329	"[""INTERCHROMOSOMAL[chrY--chr22]""]"	chrY:26515690-chr22:18939448	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TNFRSF10D--AL138752.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TNFRSF10D^ENSG00000173530.6	chr8:23145067:-	AL138752.1^ENSG00000232454.2	chr9:37836277:+	LH00995:25:23T55JLT4:5:2284:33263:21626	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr9]""]"	chr8:23145067-chr9:37836277	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TAS2R14--PRR4	1	0	1.0	0.0	ONLY_REF_SPLICE	TAS2R14^ENSG00000212127.6	chr12:11034782:-	PRR4^ENSG00000111215.12	chr12:10848407:-	LH00995:25:23T55JLT4:8:1489:35552:2359	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8062	"[""INTRACHROMOSOMAL[chr12:0.09Mb]"",""NEIGHBORS[87933]""]"	chr12:11034782-chr12:10848407	False			0	Read count too low: 1 < 8	FAIL	1
TAF13--IL20RB	1	0	1.0	0.0	ONLY_REF_SPLICE	TAF13^ENSG00000197780.10	chr1:109074987:-	IL20RB^ENSG00000174564.13	chr3:136980466:+	LH00995:25:23T55JLT4:6:2352:34792:11944	.	YES_LDAS	0.0034	GT	1.5329	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:109074987-chr3:136980466	False			0	Read count too low: 1 < 8	FAIL	1
SWT1--PDE4B	1	0	1.0	0.0	ONLY_REF_SPLICE	SWT1^ENSG00000116668.13	chr1:185206763:+	PDE4B^ENSG00000184588.18	chr1:66332508:+	LH00995:25:23T55JLT4:8:1434:23264:12714	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6402	"[""INTRACHROMOSOMAL[chr1:118.78Mb]""]"	chr1:185206763-chr1:66332508	False			0	Read count too low: 1 < 8	FAIL	1
SVEP1--CDH18	1	0	1.0	0.0	ONLY_REF_SPLICE	SVEP1^ENSG00000165124.18	chr9:110496815:-	CDH18^ENSG00000145526.12	chr5:19839242:-	LH00995:25:23T55JLT4:8:2463:32672:5750	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr9--chr5]""]"	chr9:110496815-chr5:19839242	False			0	Read count too low: 1 < 8	FAIL	1
STAC--LINC01947	1	0	0.5	0.0	INCL_NON_REF_SPLICE	STAC^ENSG00000144681.11	chr3:36380754:+	LINC01947^ENSG00000254130.1	chr5:166926110:-	LH00995:25:23T55JLT4:6:1144:6364:29403	.	YES_LDAS	0.0017	GT	1.8062	AG	1.8892	"[""INTERCHROMOSOMAL[chr3--chr5]""]"	chr3:36380754-chr5:166926110	False			0	Read count too low: 1 < 8	FAIL	1
STAC--CLEC4C	1	0	0.5	0.0	INCL_NON_REF_SPLICE	STAC^ENSG00000144681.11	chr3:36380754:+	CLEC4C^ENSG00000198178.11	chr12:7751519:-	LH00995:25:23T55JLT4:6:1144:6364:29403	.	YES_LDAS	0.0017	GT	1.8062	AG	1.8892	"[""INTERCHROMOSOMAL[chr3--chr12]""]"	chr3:36380754-chr12:7751519	False			0	Read count too low: 1 < 8	FAIL	1
ST8SIA6--ATP8B5P	1	0	1.0	0.0	ONLY_REF_SPLICE	ST8SIA6^ENSG00000148488.17	chr10:17453559:-	ATP8B5P^ENSG00000179766.19	chr9:35433707:+	LH00995:25:23T55JLT4:8:1297:2634:19328	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8295	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:17453559-chr9:35433707	False			0	Read count too low: 1 < 8	FAIL	1
SRGAP2C--AC244453.1	1	0	0.5	0.0	ONLY_REF_SPLICE	SRGAP2C^ENSG00000171943.12	chr1:121324640:+	AC244453.1^ENSG00000227193.2	chr1:121120031:+	LH00995:25:23T55JLT4:6:1416:27632:12070	.	YES_LDAS	0.0017	GT	1.7968	AG	1.6729	"[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[37985]""]"	chr1:121324640-chr1:121120031	False			0	Read count too low: 1 < 8	FAIL	1
SPATA17--GULP1	1	0	1.0	0.0	ONLY_REF_SPLICE	SPATA17^ENSG00000162814.11	chr1:217737967:+	GULP1^ENSG00000144366.16	chr2:188477659:+	LH00995:25:23T55JLT4:2:1161:27875:2009	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:217737967-chr2:188477659	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
SNHG6--PTCD2	1	0	1.0	0.0	ONLY_REF_SPLICE	SNHG6^ENSG00000245910.8	chr8:66922614:-	PTCD2^ENSG00000049883.15	chr5:72322172:+	LH00995:25:23T55JLT4:5:1243:25901:2009	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chr8--chr5]""]"	chr8:66922614-chr5:72322172	False			0	Read count too low: 1 < 8	FAIL	1
SMURF2P1--LRRC37BP1	1	0	1.0	0.0	ONLY_REF_SPLICE	SMURF2P1^ENSG00000248121.8	chr17:30610942:+	LRRC37BP1^ENSG00000250462.8	chr17:30633098:+	LH00995:25:23T55JLT4:6:1292:19696:23406	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""NEIGHBORS[13700]""]"	chr17:30610942-chr17:30633098	False			0	Excluded annotation pattern: Babiceanu_Normal	FAIL	1
SLC51A--CCDC73	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC51A^ENSG00000163959.10	chr3:196232631:+	CCDC73^ENSG00000186714.12	chr11:32602439:-	LH00995:25:23T55JLT4:6:2189:11760:20001	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7232	"[""INTERCHROMOSOMAL[chr3--chr11]""]"	chr3:196232631-chr11:32602439	False			0	Read count too low: 1 < 8	FAIL	1
SLC26A7--LRRC69	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC26A7^ENSG00000147606.9	chr8:91249844:+	LRRC69^ENSG00000214954.8	chr8:91200613:+	LH00995:25:23T55JLT4:8:2253:8605:28744	.	YES_LDAS	0.0034	GT	1.8062	AG	1.6049	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS_OVERLAP:+:+:[9742]""]"	chr8:91249844-chr8:91200613	False			0	Read count too low: 1 < 8	FAIL	1
SH2D2A--AL355102.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SH2D2A^ENSG00000027869.12	chr1:156815978:-	AL355102.1^ENSG00000258412.1	chr14:96214672:+	LH00995:25:23T55JLT4:5:2326:22341:3354	.	NO_LDAS	0.0034	GT	1.5546	AG	1.6402	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:156815978-chr14:96214672	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SGPP2--AP003396.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SGPP2^ENSG00000163082.10	chr2:222558696:+	AP003396.1^ENSG00000245385.2	chr11:119337094:-	LH00995:25:23T55JLT4:6:2377:44128:2695	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr2--chr11]""]"	chr2:222558696-chr11:119337094	False			0	Read count too low: 1 < 8	FAIL	1
SGO1-AS1--PRR4	1	0	1.0	0.0	ONLY_REF_SPLICE	SGO1-AS1^ENSG00000231304.2	chr3:20905607:+	PRR4^ENSG00000111215.12	chr12:10847367:-	LH00995:25:23T55JLT4:5:2119:35302:14928	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr3--chr12]""]"	chr3:20905607-chr12:10847367	False			0	Read count too low: 1 < 8	FAIL	1
SEPTIN14--AP006222.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AP006222.1^ENSG00000228463.10	chr1:268816:-	LH00995:25:23T55JLT4:8:2468:50511:25634	.	YES_LDAS	0.0034	GT	1.5546	AG	1.6895	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:55795924-chr1:268816	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
SEPTIN14--AC139099.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AC139099.2^ENSG00000262898.3	chr17:83212368:+	LH00995:25:23T55JLT4:6:2339:18887:19762	.	YES_LDAS	0.0017	GT	1.5546	AG	1.9656	"[""INTERCHROMOSOMAL[chr7--chr17]""]"	chr7:55795924-chr17:83212368	False			0	Read count too low: 1 < 8	FAIL	1
SDR9C7--PJVK	1	0	1.0	0.0	ONLY_REF_SPLICE	SDR9C7^ENSG00000170426.2	chr12:56929390:-	PJVK^ENSG00000204311.15	chr2:178460982:+	LH00995:25:23T55JLT4:8:1468:37688:15923	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5219	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:56929390-chr2:178460982	False			0	Read count too low: 1 < 8	FAIL	1
SDHAP3--AC026412.1	1	0	1.0	0.0	ONLY_REF_SPLICE	SDHAP3^ENSG00000185986.12	chr5:1593113:-	AC026412.1^ENSG00000188002.10	chr5:1599827:-	LH00995:25:23T55JLT4:8:2311:42388:21150	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4300]""]"	chr5:1593113-chr5:1599827	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
SDHAP3--AC026412.1	1	0	1.0	0.0	ONLY_REF_SPLICE	SDHAP3^ENSG00000185986.12	chr5:1584984:-	AC026412.1^ENSG00000188002.10	chr5:1629630:-	LH00995:25:23T55JLT4:5:1161:20901:24905	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4300]""]"	chr5:1584984-chr5:1629630	False			0	Read count too low: 1 < 8	FAIL	1
SCOC-AS1--AKAP7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SCOC-AS1^ENSG00000196951.11	chr4:140291232:-	AKAP7^ENSG00000118507.17	chr6:131145285:+	LH00995:25:23T55JLT4:5:2156:11962:12224	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:140291232-chr6:131145285	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RUNDC3A--DDX59	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RUNDC3A^ENSG00000108309.14	chr17:44317125:+	DDX59^ENSG00000118197.14	chr1:200666751:-	LH00995:25:23T55JLT4:5:2247:51902:8006	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:44317125-chr1:200666751	False			0	Read count too low: 1 < 8	FAIL	1
RRP15--AC125611.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RRP15^ENSG00000067533.6	chr1:218331142:+	AC125611.2^ENSG00000257954.1	chr12:49389749:+	LH00995:25:23T55JLT4:5:2355:7601:26362	.	NO_LDAS	0.0034	GT	1.5628	AG	1.6049	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:218331142-chr12:49389749	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPL32P3--RPL32P25	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPL32P3^ENSG00000251474.6	chr3:129397040:-	RPL32P25^ENSG00000242993.1	chr11:95963312:+	LH00995:25:23T55JLT4:5:2124:49265:28576	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8256	"[""INTERCHROMOSOMAL[chr3--chr11]""]"	chr3:129397040-chr11:95963312	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPL23AP59--RPL23AP78	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPL23AP59^ENSG00000215002.2	chr10:106550150:+	RPL23AP78^ENSG00000269244.1	chr19:8729144:-	LH00995:25:23T55JLT4:8:2261:16864:20183	.	YES_LDAS	0.0034	GT	1.3383	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr19]""]"	chr10:106550150-chr19:8729144	False			0	Read count too low: 1 < 8	FAIL	1
RPL22P2--RPL22P4	1	0	0.25	0.0	INCL_NON_REF_SPLICE	RPL22P2^ENSG00000241081.1	chr14:76886533:-	RPL22P4^ENSG00000225483.1	chr1:206161088:-	LH00995:25:23T55JLT4:8:1481:7763:22187	.	NO_LDAS	0.0008	AT	1.9656	AC	1.7465	"[""INTERCHROMOSOMAL[chr14--chr1]""]"	chr14:76886533-chr1:206161088	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RNU5F-6P--CACNB2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNU5F-6P^ENSG00000199849.1	chr1:164351361:+	CACNB2^ENSG00000165995.22	chr10:18541050:+	LH00995:25:23T55JLT4:8:2368:42170:4153	.	NO_LDAS	0.0034	GT	1.5301	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:164351361-chr10:18541050	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RNFT1-DT--AC053481.3	1	0	0.25	0.0	ONLY_REF_SPLICE	RNFT1-DT^ENSG00000267302.5	chr17:59966467:+	AC053481.3^ENSG00000266365.1	chr17:62231577:-	LH00995:25:23T55JLT4:6:2189:23353:17072	.	YES_LDAS	0.0008	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr17:2.23Mb]""]"	chr17:59966467-chr17:62231577	False			0	Read count too low: 1 < 8	FAIL	1
REREP1Y--PPP1R12BP1	1	0	0.25	0.0	ONLY_REF_SPLICE	REREP1Y^ENSG00000225189.1	chrY:23472280:+	PPP1R12BP1^ENSG00000229238.3	chrY:26291137:-	LH00995:25:23T55JLT4:5:1189:4649:27161	.	YES_LDAS	0.0008	GT	1.7232	AG	1.8323	"[""INTRACHROMOSOMAL[chrY:2.81Mb]""]"	chrY:23472280-chrY:26291137	False			0	Read count too low: 1 < 8	FAIL	1
REPIN1-AS1--ZNF169	1	0	1.0	0.0	INCL_NON_REF_SPLICE	REPIN1-AS1^ENSG00000240449.1	chr7:150372340:-	ZNF169^ENSG00000175787.17	chr9:94300591:+	LH00995:25:23T55JLT4:6:1467:41830:19454	.	NO_LDAS	0.0034	GT	1.6729	AG	1.5219	"[""INTERCHROMOSOMAL[chr7--chr9]""]"	chr7:150372340-chr9:94300591	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
REPIN1-AS1--AC091390.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	REPIN1-AS1^ENSG00000240449.1	chr7:150372505:-	AC091390.1^ENSG00000170409.7	chr7:102327347:-	LH00995:25:23T55JLT4:8:2314:15797:13149	.	YES_LDAS	0.0008	GT	1.7465	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:48.03Mb]""]"	chr7:150372505-chr7:102327347	False			0	Read count too low: 1 < 8	FAIL	1
RASL12--PAAF1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RASL12^ENSG00000103710.11	chr15:65054980:-	PAAF1^ENSG00000175575.13	chr11:73927977:+	LH00995:25:23T55JLT4:8:2208:51635:12308	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTERCHROMOSOMAL[chr15--chr11]""]"	chr15:65054980-chr11:73927977	False			0	Read count too low: 1 < 8	FAIL	1
RALGPS1--STRBP	1	0	1.0	0.0	ONLY_REF_SPLICE	RALGPS1^ENSG00000136828.19	chr9:127069356:+	STRBP^ENSG00000165209.19	chr9:123184298:-	LH00995:25:23T55JLT4:5:2473:17075:18838	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr9:3.65Mb]""]"	chr9:127069356-chr9:123184298	False			0	Read count too low: 1 < 8	FAIL	1
RAB33B--AC104187.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAB33B^ENSG00000172007.7	chr4:139454306:+	AC104187.1^ENSG00000271937.1	chr3:44338529:-	LH00995:25:23T55JLT4:8:1426:47469:17787	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7465	"[""INTERCHROMOSOMAL[chr4--chr3]""]"	chr4:139454306-chr3:44338529	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PSAT1--GOLGA6L10	1	0	0.2	0.0	INCL_NON_REF_SPLICE	PSAT1^ENSG00000135069.14	chr9:78329596:+	GOLGA6L10^ENSG00000278662.5	chr15:82344767:-	LH00995:25:23T55JLT4:8:2443:6509:11271	.	YES_LDAS	0.0007	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr15]""]"	chr9:78329596-chr15:82344767	False			0	Read count too low: 1 < 8	FAIL	1
PRR16--AC114284.1	1	0	1.0	0.0	ONLY_REF_SPLICE	PRR16^ENSG00000184838.15	chr5:120481293:+	AC114284.1^ENSG00000248927.1	chr5:120789954:+	LH00995:25:23T55JLT4:8:2154:12019:7025	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.09Mb]"",""NEIGHBORS[93886]""]"	chr5:120481293-chr5:120789954	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
POU5F1--AC142116.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	POU5F1^ENSG00000204531.20	chr6:31165927:-	AC142116.2^ENSG00000286515.1	chr2:126202947:+	LH00995:25:23T55JLT4:6:1198:23385:24471	.	NO_LDAS	0.0034	GT	1.5628	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr2]""]"	chr6:31165927-chr2:126202947	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
POLE2--LINC01091	1	0	1.0	0.0	INCL_NON_REF_SPLICE	POLE2^ENSG00000100479.13	chr14:49674123:-	LINC01091^ENSG00000249464.6	chr4:123708612:+	LH00995:25:23T55JLT4:5:2256:40059:22943	.	NO_LDAS	0.0034	GT	1.9329	AG	1.5301	"[""INTERCHROMOSOMAL[chr14--chr4]""]"	chr14:49674123-chr4:123708612	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PLPP1--ZNF543	1	0	1.0	0.0	ONLY_REF_SPLICE	PLPP1^ENSG00000067113.17	chr5:55534572:-	ZNF543^ENSG00000178229.8	chr19:57323682:+	LH00995:25:23T55JLT4:5:2219:40665:16820	.	YES_LDAS	0.0034	GT	1.5219	AG	1.7465	"[""INTERCHROMOSOMAL[chr5--chr19]""]"	chr5:55534572-chr19:57323682	False			0	Read count too low: 1 < 8	FAIL	1
PLGLB1--AL109933.1	1	0	0.25	0.0	ONLY_REF_SPLICE	PLGLB1^ENSG00000183281.15	chr2:87016302:-	AL109933.1^ENSG00000224477.5	chr6:160700554:+	LH00995:25:23T55JLT4:6:1195:45244:15839	.	NO_LDAS	0.0008	GT	1.3996	AG	1.9219	"[""INTERCHROMOSOMAL[chr2--chr6]""]"	chr2:87016302-chr6:160700554	False			0	Read count too low: 1 < 8	FAIL	1
PLEKHS1--UPK3BL2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PLEKHS1^ENSG00000148735.15	chr10:113782760:+	UPK3BL2^ENSG00000284981.1	chr7:102541662:-	LH00995:25:23T55JLT4:6:1321:13968:15166	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:113782760-chr7:102541662	False			0	Read count too low: 1 < 8	FAIL	1
PINX1--RP1L1	1	0	1.0	0.0	ONLY_REF_SPLICE	PINX1^ENSG00000254093.9	chr8:10826152:-	RP1L1^ENSG00000183638.6	chr8:10623220:-	LH00995:25:23T55JLT4:5:1442:46911:23938	.	YES_LDAS	0.0034	GT	1.7232	AG	1.4566	"[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]"	chr8:10826152-chr8:10623220	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
PINX1--RP1L1	1	0	1.0	0.0	ONLY_REF_SPLICE	PINX1^ENSG00000254093.9	chr8:10820193:-	RP1L1^ENSG00000183638.6	chr8:10623220:-	LH00995:25:23T55JLT4:5:1396:15101:3032	.	YES_LDAS	0.0034	GT	1.8062	AG	1.4566	"[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]"	chr8:10820193-chr8:10623220	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
PGM2L1--SORBS2	1	0	1.0	0.0	ONLY_REF_SPLICE	PGM2L1^ENSG00000165434.8	chr11:74398051:-	SORBS2^ENSG00000154556.18	chr4:185662242:-	LH00995:25:23T55JLT4:6:1417:23328:12294	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr4]""]"	chr11:74398051-chr4:185662242	False			0	Read count too low: 1 < 8	FAIL	1
PEX11B--AC087500.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PEX11B^ENSG00000131779.11	chr1:145916817:-	AC087500.1^ENSG00000261879.7	chr17:5234119:+	LH00995:25:23T55JLT4:5:2128:34023:25858	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:145916817-chr17:5234119	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PDRG1--BMS1P10	1	0	1.0	0.0	ONLY_REF_SPLICE	PDRG1^ENSG00000088356.6	chr20:31948808:-	BMS1P10^ENSG00000237238.3	chr9:63309312:-	LH00995:25:23T55JLT4:8:2359:12455:12854	.	YES_LDAS	0.0034	GT	1.371	AG	1.6402	"[""INTERCHROMOSOMAL[chr20--chr9]""]"	chr20:31948808-chr9:63309312	False			0	Read count too low: 1 < 8	FAIL	1
PCLAF--CDKL3	1	0	1.0	0.0	ONLY_REF_SPLICE	PCLAF^ENSG00000166803.14	chr15:64376743:-	CDKL3^ENSG00000006837.12	chr5:134312380:-	LH00995:25:23T55JLT4:6:1316:36515:18684	.	YES_LDAS	0.0034	GT	1.053	AG	1.7968	"[""INTERCHROMOSOMAL[chr15--chr5]""]"	chr15:64376743-chr5:134312380	False			0	Read count too low: 1 < 8	FAIL	1
PCDHGA9--PCDHGB5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PCDHGA9^ENSG00000261934.2	chr5:141405376:+	PCDHGB5^ENSG00000276547.1	chr5:141398677:+	LH00995:25:23T55JLT4:8:2226:39735:12406	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7056	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2276]""]"	chr5:141405376-chr5:141398677	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
PCDH18--AL109615.1	1	0	0.17	0.0	INCL_NON_REF_SPLICE	PCDH18^ENSG00000189184.12	chr4:137531230:-	AL109615.1^ENSG00000183239.5	chr6:44089457:-	LH00995:25:23T55JLT4:5:2485:34654:2597	.	YES_LDAS	0.0006	GT	1.8062	AG	1.9899	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:137531230-chr6:44089457	False			0	Read count too low: 1 < 8	FAIL	1
PAXIP1-AS2--VNN2	1	0	1.0	0.0	ONLY_REF_SPLICE	PAXIP1-AS2^ENSG00000214106.9	chr7:154944398:+	VNN2^ENSG00000112303.14	chr6:132757759:-	LH00995:25:23T55JLT4:5:1360:39711:1715	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr7--chr6]""]"	chr7:154944398-chr6:132757759	False			0	Read count too low: 1 < 8	FAIL	1
PADI1--NEDD8P1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PADI1^ENSG00000142623.11	chr1:17245946:+	NEDD8P1^ENSG00000226970.2	chr1:84244494:+	LH00995:25:23T55JLT4:8:2311:7933:14550	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:67.00Mb]""]"	chr1:17245946-chr1:84244494	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PACC1--LINC02608	1	0	1.0	0.0	ONLY_REF_SPLICE	PACC1^ENSG00000065600.13	chr1:212377562:-	LINC02608^ENSG00000226251.6	chr1:212230259:-	LH00995:25:23T55JLT4:6:1181:26055:9758	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.12Mb]""]"	chr1:212377562-chr1:212230259	False			0	Read count too low: 1 < 8	FAIL	1
OR2B11--AL358334.3	1	0	0.25	0.0	INCL_NON_REF_SPLICE	OR2B11^ENSG00000177535.8	chr1:247453769:-	AL358334.3^ENSG00000258745.1	chr14:50912995:+	LH00995:25:23T55JLT4:6:1238:25707:26755	.	NO_LDAS	0.0008	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:247453769-chr14:50912995	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NVL--MMP10	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NVL^ENSG00000143748.18	chr1:224317888:-	MMP10^ENSG00000166670.10	chr11:102770861:-	LH00995:25:23T55JLT4:8:1422:39581:26488	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:224317888-chr11:102770861	False			0	Read count too low: 1 < 8	FAIL	1
NTF6A--CGB1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	NTF6A^ENSG00000267019.1	chr19:49025643:-	CGB1^ENSG00000267631.5	chr19:49048372:-	LH00995:25:23T55JLT4:8:2309:45099:24274	.	YES_LDAS	0.0011	GT	1.5546	AG	1.5058	"[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9549]""]"	chr19:49025643-chr19:49048372	False			0	Read count too low: 1 < 8	FAIL	1
NTF6A--CGB1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	NTF6A^ENSG00000267019.1	chr19:49025643:-	CGB1^ENSG00000267631.5	chr19:49036303:-	LH00995:25:23T55JLT4:8:2309:45099:24274	.	YES_LDAS	0.0011	GT	1.5546	AG	1.7819	"[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9549]""]"	chr19:49025643-chr19:49036303	False			0	Read count too low: 1 < 8	FAIL	1
NT5M--AC004846.2	1	0	0.17	0.0	INCL_NON_REF_SPLICE	NT5M^ENSG00000205309.14	chr17:17303823:+	AC004846.2^ENSG00000258944.1	chr14:73272621:-	LH00995:25:23T55JLT4:5:1240:44637:11705	.	NO_LDAS	0.0006	GT	1.7232	AG	1.8256	"[""INTERCHROMOSOMAL[chr17--chr14]""]"	chr17:17303823-chr14:73272621	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NSUN5P2--CORO6	1	0	0.5	0.0	INCL_NON_REF_SPLICE	NSUN5P2^ENSG00000106133.18	chr7:72948528:-	CORO6^ENSG00000167549.18	chr17:29616776:-	LH00995:25:23T55JLT4:8:1219:21888:17955	.	NO_LDAS	0.0017	GC	0.9183	AG	1.5656	"[""INTERCHROMOSOMAL[chr7--chr17]""]"	chr7:72948528-chr17:29616776	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
NPM1P12--NPM1P11	1	0	0.5	0.0	INCL_NON_REF_SPLICE	NPM1P12^ENSG00000215311.3	chr7:149334345:+	NPM1P11^ENSG00000226827.1	chr7:11258217:-	LH00995:25:23T55JLT4:5:1438:3281:20841	.	NO_LDAS	0.0017	GT	1.9899	AG	1.9656	"[""INTRACHROMOSOMAL[chr7:138.08Mb]""]"	chr7:149334345-chr7:11258217	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NPIPB14P--CDH18	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NPIPB14P^ENSG00000226232.8	chr16:69996065:-	CDH18^ENSG00000145526.12	chr5:19473575:-	LH00995:25:23T55JLT4:5:2271:50284:26082	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr5]""]"	chr16:69996065-chr5:19473575	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NLRP14--ZNF215	1	0	1.0	0.0	ONLY_REF_SPLICE	NLRP14^ENSG00000158077.5	chr11:7070456:+	ZNF215^ENSG00000149054.16	chr11:6943546:+	LH00995:25:23T55JLT4:5:1398:45746:27357	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5656	"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19475]""]"	chr11:7070456-chr11:6943546	False			0	Read count too low: 1 < 8	FAIL	1
NKX2-5--CALHM5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NKX2-5^ENSG00000183072.10	chr5:173233062:-	CALHM5^ENSG00000178033.6	chr6:116517928:+	LH00995:25:23T55JLT4:6:2157:52064:23364	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr5--chr6]""]"	chr5:173233062-chr6:116517928	False			0	Read count too low: 1 < 8	FAIL	1
NKX2-2--AL133325.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NKX2-2^ENSG00000125820.6	chr20:21512349:-	AL133325.3^ENSG00000278041.1	chr20:21502309:-	LH00995:25:23T55JLT4:8:1206:23320:19230	.	YES_LDAS	0.0034	GT	1.5219	AG	1.7968	"[""INTRACHROMOSOMAL[chr20:0.01Mb]"",""NEIGHBORS[8083]""]"	chr20:21512349-chr20:21502309	False			0	Read count too low: 1 < 8	FAIL	1
NIFK-AS1--AC079305.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NIFK-AS1^ENSG00000236859.7	chr2:121651919:+	AC079305.1^ENSG00000222043.2	chr2:177264525:+	LH00995:25:23T55JLT4:5:2326:7399:8833	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""INTRACHROMOSOMAL[chr2:55.54Mb]""]"	chr2:121651919-chr2:177264525	False			0	Read count too low: 1 < 8	FAIL	1
NDUFS4--RWDD1	1	0	1.0	0.0	ONLY_REF_SPLICE	NDUFS4^ENSG00000164258.12	chr5:53604895:+	RWDD1^ENSG00000111832.13	chr6:116580295:+	LH00995:25:23T55JLT4:5:1135:47776:8847	.	YES_LDAS	0.0034	GT	1.8062	AG	1.6895	"[""INTERCHROMOSOMAL[chr5--chr6]""]"	chr5:53604895-chr6:116580295	False			0	Read count too low: 1 < 8	FAIL	1
MRPL40--NSUN6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPL40^ENSG00000185608.9	chr22:19436042:+	NSUN6^ENSG00000241058.4	chr10:18546091:-	LH00995:25:23T55JLT4:5:2128:16654:2920	.	YES_LDAS	0.0034	GC	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr22--chr10]""]"	chr22:19436042-chr10:18546091	False			0	Read count too low: 1 < 8	FAIL	1
MORN2--CYP2U1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MORN2^ENSG00000188010.15	chr2:38881480:+	CYP2U1^ENSG00000155016.18	chr4:107949416:+	LH00995:25:23T55JLT4:8:2401:14640:12770	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:38881480-chr4:107949416	False			0	Read count too low: 1 < 8	FAIL	1
MMP3--SGK2	1	0	1.0	0.0	ONLY_REF_SPLICE	MMP3^ENSG00000149968.12	chr11:102843442:-	SGK2^ENSG00000101049.17	chr20:43566473:+	LH00995:25:23T55JLT4:8:1119:38934:22565	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr11--chr20]""]"	chr11:102843442-chr20:43566473	False			0	Read count too low: 1 < 8	FAIL	1
MIR548XHG--TMPRSS15	1	0	1.0	0.0	ONLY_REF_SPLICE	MIR548XHG^ENSG00000224141.6	chr21:18737924:-	TMPRSS15^ENSG00000154646.9	chr21:18398329:-	LH00995:25:23T55JLT4:6:1263:45099:25311	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr21:0.08Mb]"",""NEIGHBORS[75386]""]"	chr21:18737924-chr21:18398329	False			0	Read count too low: 1 < 8	FAIL	1
MCUB--C5orf64	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MCUB^ENSG00000005059.16	chr4:109560436:+	C5orf64^ENSG00000178722.13	chr5:61757477:+	LH00995:25:23T55JLT4:6:2341:10198:9646	.	NO_LDAS	0.0034	GT	1.3753	AG	1.5329	"[""INTERCHROMOSOMAL[chr4--chr5]""]"	chr4:109560436-chr5:61757477	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MCIDAS--SMIM32	1	0	0.5	0.0	INCL_NON_REF_SPLICE	MCIDAS^ENSG00000234602.9	chr5:55222252:-	SMIM32^ENSG00000271824.2	chr5:136192929:-	LH00995:25:23T55JLT4:6:2458:28182:3242	.	NO_LDAS	0.0017	GC	1.7232	AG	1.371	"[""INTRACHROMOSOMAL[chr5:80.96Mb]""]"	chr5:55222252-chr5:136192929	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LYPLAL1--NOX4	1	0	1.0	0.0	ONLY_REF_SPLICE	LYPLAL1^ENSG00000143353.12	chr1:219193251:+	NOX4^ENSG00000086991.13	chr11:89355043:-	LH00995:25:23T55JLT4:8:2330:35560:7165	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:219193251-chr11:89355043	False			0	Read count too low: 1 < 8	FAIL	1
LYPLA1P3--CDKL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LYPLA1P3^ENSG00000218350.1	chr6:71165176:+	CDKL1^ENSG00000100490.10	chr14:50359149:-	LH00995:25:23T55JLT4:5:1160:48375:27315	.	YES_LDAS	0.0034	GC	1.8062	AG	1.6895	"[""INTERCHROMOSOMAL[chr6--chr14]""]"	chr6:71165176-chr14:50359149	False			0	Read count too low: 1 < 8	FAIL	1
LYPD6B--AC016682.1	1	0	1.0	0.0	ONLY_REF_SPLICE	LYPD6B^ENSG00000150556.17	chr2:149130953:+	AC016682.1^ENSG00000286081.1	chr2:150152832:-	LH00995:25:23T55JLT4:8:1494:37915:1406	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9219	"[""INTRACHROMOSOMAL[chr2:0.94Mb]""]"	chr2:149130953-chr2:150152832	False			0	Read count too low: 1 < 8	FAIL	1
LRRC49--CHORDC1P4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LRRC49^ENSG00000137821.12	chr15:70911598:+	CHORDC1P4^ENSG00000263606.1	chr18:2946422:-	LH00995:25:23T55JLT4:8:1188:39476:9015	.	YES_LDAS	0.0034	GT	1.9656	AG	1.4295	"[""INTERCHROMOSOMAL[chr15--chr18]""]"	chr15:70911598-chr18:2946422	False			0	Read count too low: 1 < 8	FAIL	1
LRIT3--RRH	1	0	1.0	0.0	ONLY_REF_SPLICE	LRIT3^ENSG00000183423.12	chr4:109851976:+	RRH^ENSG00000180245.7	chr4:109833139:+	LH00995:25:23T55JLT4:5:2116:30650:12588	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5219	"[""INTRACHROMOSOMAL[chr4:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[1016]""]"	chr4:109851976-chr4:109833139	False			0	Read count too low: 1 < 8	FAIL	1
LINC02109--HENMT1	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02109^ENSG00000259786.7	chr5:29193115:+	HENMT1^ENSG00000162639.16	chr1:108659962:-	LH00995:25:23T55JLT4:5:1132:5126:2990	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:29193115-chr1:108659962	False			0	Read count too low: 1 < 8	FAIL	1
LINC01297--POTEH	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01297^ENSG00000274827.4	chr14:19381177:-	POTEH^ENSG00000198062.15	chr22:15698662:+	LH00995:25:23T55JLT4:8:2271:35180:20295	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7968	"[""INTERCHROMOSOMAL[chr14--chr22]""]"	chr14:19381177-chr22:15698662	False			0	Read count too low: 1 < 8	FAIL	1
LINC00311--ADCY4	1	0	0.5	0.0	INCL_NON_REF_SPLICE	LINC00311^ENSG00000179219.5	chr16:85283485:+	ADCY4^ENSG00000129467.14	chr14:24325887:-	LH00995:25:23T55JLT4:6:1385:3023:11145	.	NO_LDAS	0.0017	GC	1.7056	AG	1.9086	"[""INTERCHROMOSOMAL[chr16--chr14]""]"	chr16:85283485-chr14:24325887	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KYNU--ARHGAP15	1	0	1.0	0.0	ONLY_REF_SPLICE	KYNU^ENSG00000115919.15	chr2:142986021:+	ARHGAP15^ENSG00000075884.14	chr2:143155477:+	LH00995:25:23T55JLT4:6:1285:24744:5890	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7968	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.04Mb]"",""NEIGHBORS[35529]""]"	chr2:142986021-chr2:143155477	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
KLHL20--AC093515.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KLHL20^ENSG00000076321.11	chr1:173716066:+	AC093515.1^ENSG00000260289.2	chr16:8112494:-	LH00995:25:23T55JLT4:8:2171:13968:23686	.	NO_LDAS	0.0034	GT	1.8062	AG	1.7056	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:173716066-chr16:8112494	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KLF3-AS1--AL157400.5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KLF3-AS1^ENSG00000231160.10	chr4:38664440:-	AL157400.5^ENSG00000249962.1	chr10:89644935:-	LH00995:25:23T55JLT4:6:2128:15303:25269	.	NO_LDAS	0.0034	GC	1.4716	AG	1.5628	"[""INTERCHROMOSOMAL[chr4--chr10]""]"	chr4:38664440-chr10:89644935	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KCTD6--CARF	1	0	0.5	0.0	ONLY_REF_SPLICE	KCTD6^ENSG00000168301.13	chr3:58500403:+	CARF^ENSG00000138380.18	chr2:202952559:+	LH00995:25:23T55JLT4:8:1473:4204:3438	.	NO_LDAS	0.0017	GT	1.9329	AG	1.9899	"[""INTERCHROMOSOMAL[chr3--chr2]""]"	chr3:58500403-chr2:202952559	False			0	Read count too low: 1 < 8	FAIL	1
KANTR--AL158151.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	KANTR^ENSG00000232593.7	chrX:53143269:+	AL158151.1^ENSG00000204055.5	chr9:129176874:+	LH00995:25:23T55JLT4:5:1278:13653:9547	.	YES_LDAS	0.0017	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chrX--chr9]""]"	chrX:53143269-chr9:129176874	False			0	Read count too low: 1 < 8	FAIL	1
ITGA9--C3orf35	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ITGA9^ENSG00000144668.12	chr3:37542585:+	C3orf35^ENSG00000198590.12	chr3:37383226:+	LH00995:25:23T55JLT4:5:1155:47008:26012	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11929]""]"	chr3:37542585-chr3:37383226	False			0	Read count too low: 1 < 8	FAIL	1
IRAK1BP1--OR10U1P	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IRAK1BP1^ENSG00000146243.14	chr6:78867891:+	OR10U1P^ENSG00000227423.2	chr12:55194013:-	LH00995:25:23T55JLT4:5:2447:6040:8188	.	NO_LDAS	0.0034	GT	1.7465	AG	1.6895	"[""INTERCHROMOSOMAL[chr6--chr12]""]"	chr6:78867891-chr12:55194013	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
INTS12--RBPMS2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	INTS12^ENSG00000138785.15	chr4:105686788:-	RBPMS2^ENSG00000166831.9	chr15:64748493:-	LH00995:25:23T55JLT4:5:2196:4018:11523	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7232	"[""INTERCHROMOSOMAL[chr4--chr15]""]"	chr4:105686788-chr15:64748493	False			0	Read count too low: 1 < 8	FAIL	1
IL12RB2--SKAP1	1	0	1.0	0.0	ONLY_REF_SPLICE	IL12RB2^ENSG00000081985.13	chr1:67314000:+	SKAP1^ENSG00000141293.16	chr17:48189500:-	LH00995:25:23T55JLT4:5:2363:3249:1028	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:67314000-chr17:48189500	False			0	Read count too low: 1 < 8	FAIL	1
IFTAP--LINC02408	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IFTAP^ENSG00000166352.18	chr11:36659208:+	LINC02408^ENSG00000203585.4	chr12:67567064:+	LH00995:25:23T55JLT4:5:1354:14357:19454	.	NO_LDAS	0.0034	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr12]""]"	chr11:36659208-chr12:67567064	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IFT43--GPR65	1	0	1.0	0.0	ONLY_REF_SPLICE	IFT43^ENSG00000119650.13	chr14:75988977:+	GPR65^ENSG00000140030.6	chr14:88010389:+	LH00995:25:23T55JLT4:2:1151:41369:12546	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5301	"[""INTRACHROMOSOMAL[chr14:11.92Mb]""]"	chr14:75988977-chr14:88010389	False			0	Read count too low: 1 < 8	FAIL	1
HULC--C5orf46	1	0	1.0	0.0	ONLY_REF_SPLICE	HULC^ENSG00000285219.2	chr6:8965457:+	C5orf46^ENSG00000178776.5	chr5:147901773:-	LH00995:25:23T55JLT4:6:1126:33562:2639	.	YES_LDAS	0.0034	GT	1.9329	AG	1.3996	"[""INTERCHROMOSOMAL[chr6--chr5]""]"	chr6:8965457-chr5:147901773	False			0	Read count too low: 1 < 8	FAIL	1
HSPD1P2--AC024937.2	1	0	0.11	0.0	INCL_NON_REF_SPLICE	HSPD1P2^ENSG00000254543.1	chr8:7891468:-	AC024937.2^ENSG00000231464.1	chr3:195996676:+	LH00995:25:23T55JLT4:6:1284:14235:2794	.	NO_LDAS	0.0004	GT	1.8062	AG	1.7465	"[""INTERCHROMOSOMAL[chr8--chr3]""]"	chr8:7891468-chr3:195996676	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HSPA2--SMIM10	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HSPA2^ENSG00000126803.9	chr14:64542429:+	SMIM10^ENSG00000184785.6	chrX:134991350:+	LH00995:25:23T55JLT4:6:1498:35277:8609	.	YES_LDAS	0.0034	GT	1.371	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chrX]""]"	chr14:64542429-chrX:134991350	False			0	Read count too low: 1 < 8	FAIL	1
HROB--QPRT	1	0	1.0	0.0	ONLY_REF_SPLICE	HROB^ENSG00000125319.15	chr17:44142145:+	QPRT^ENSG00000103485.19	chr16:29694664:+	LH00995:25:23T55JLT4:6:2253:43384:13289	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5219	"[""INTERCHROMOSOMAL[chr17--chr16]""]"	chr17:44142145-chr16:29694664	False			0	Read count too low: 1 < 8	FAIL	1
HMSD--AL139395.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	HMSD^ENSG00000221887.6	chr18:63981838:+	AL139395.1^ENSG00000271589.1	chrX:74769705:+	LH00995:25:23T55JLT4:5:1318:44370:16203	.	YES_LDAS	0.0017	GT	1.6895	AG	1.9329	"[""INTERCHROMOSOMAL[chr18--chrX]""]"	chr18:63981838-chrX:74769705	False			0	Read count too low: 1 < 8	FAIL	1
HLA-G--ANKRD11P1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HLA-G^ENSG00000204632.12	chr6:29830600:+	ANKRD11P1^ENSG00000234429.1	chr2:81199669:-	LH00995:25:23T55JLT4:5:1123:20740:4503	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7232	"[""INTERCHROMOSOMAL[chr6--chr2]""]"	chr6:29830600-chr2:81199669	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HGF--RPL18P11	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HGF^ENSG00000019991.18	chr7:81769920:-	RPL18P11^ENSG00000213307.4	chr15:78661160:-	LH00995:25:23T55JLT4:8:1107:39614:8413	.	YES_LDAS	0.0034	AT	1.8892	AC	1.9656	"[""INTERCHROMOSOMAL[chr7--chr15]""]"	chr7:81769920-chr15:78661160	False			0	Read count too low: 1 < 8	FAIL	1
GYG2--ARSFP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GYG2^ENSG00000056998.20	chrX:2843354:+	ARSFP1^ENSG00000232226.2	chrY:12258031:-	LH00995:25:23T55JLT4:8:1216:47582:10556	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chrX--chrY]""]"	chrX:2843354-chrY:12258031	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
GTF2IP20--SEPTIN14	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GTF2IP20^ENSG00000272645.3	chr1:223951400:-	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	LH00995:25:23T55JLT4:6:1135:33473:2709	.	NO_LDAS	0.0034	GT	1.6402	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:223951400-chr7:55796092	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
GTF2IP14--AC073210.1	1	0	0.5	0.0	ONLY_REF_SPLICE	GTF2IP14^ENSG00000226002.1	chr7:65091952:+	AC073210.1^ENSG00000227113.2	chr7:65078624:+	LH00995:25:23T55JLT4:6:1126:17318:6227	.	NO_LDAS	0.0017	GT	1.7968	AG	1.8323	"[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5323]""]"	chr7:65091952-chr7:65078624	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
GTF2A1L--STON1	1	0	1.0	0.0	ONLY_REF_SPLICE	GTF2A1L^ENSG00000242441.8	chr2:48671680:+	STON1^ENSG00000243244.7	chr2:48580587:+	LH00995:25:23T55JLT4:8:2247:19372:18866	.	NO_LDAS	0.0034	GT	1.8256	AG	1.9086	"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19285]""]"	chr2:48671680-chr2:48580587	False			0	Read count too low: 1 < 8	FAIL	1
GPR1--LINC02418	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GPR1^ENSG00000183671.12	chr2:206176319:-	LINC02418^ENSG00000214039.9	chr12:130036222:-	LH00995:25:23T55JLT4:8:2240:48618:29613	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8062	"[""INTERCHROMOSOMAL[chr2--chr12]""]"	chr2:206176319-chr12:130036222	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GLYATL2--GLYAT	1	0	1.0	0.0	ONLY_REF_SPLICE	GLYATL2^ENSG00000156689.7	chr11:58904156:-	GLYAT^ENSG00000149124.11	chr11:58724511:-	LH00995:25:23T55JLT4:8:1383:27802:9646	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.10Mb]""]"	chr11:58904156-chr11:58724511	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
GLYATL2--GLYAT	1	0	1.0	0.0	ONLY_REF_SPLICE	GLYATL2^ENSG00000156689.7	chr11:58904156:-	GLYAT^ENSG00000149124.11	chr11:58715423:-	LH00995:25:23T55JLT4:6:2389:51829:12868	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.10Mb]""]"	chr11:58904156-chr11:58715423	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
FUT7--P2RX5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FUT7^ENSG00000180549.8	chr9:137030554:-	P2RX5^ENSG00000083454.22	chr17:3688089:-	LH00995:25:23T55JLT4:5:1132:8119:9407	.	YES_LDAS	0.0034	AT	1.7232	AC	1.5058	"[""INTERCHROMOSOMAL[chr9--chr17]""]"	chr9:137030554-chr17:3688089	False			0	Read count too low: 1 < 8	FAIL	1
FTH1P3--IMMP1L	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FTH1P3^ENSG00000213453.3	chr2:27392910:-	IMMP1L^ENSG00000148950.11	chr11:31433528:-	LH00995:25:23T55JLT4:5:2290:38117:26811	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8256	"[""INTERCHROMOSOMAL[chr2--chr11]""]"	chr2:27392910-chr11:31433528	False			0	Read count too low: 1 < 8	FAIL	1
FRK--GRK7	1	0	1.0	0.0	ONLY_REF_SPLICE	FRK^ENSG00000111816.8	chr6:116059968:-	GRK7^ENSG00000114124.2	chr3:141780374:+	LH00995:25:23T55JLT4:8:2254:33845:29613	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:116059968-chr3:141780374	False			0	Read count too low: 1 < 8	FAIL	1
FBXO36--IFT81	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FBXO36^ENSG00000153832.12	chr2:229996923:+	IFT81^ENSG00000122970.16	chr12:110167873:+	LH00995:25:23T55JLT4:6:2174:46361:9730	.	NO_LDAS	0.0034	GT	1.9219	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr12]""]"	chr2:229996923-chr12:110167873	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FAM181B--CDHR2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM181B^ENSG00000182103.5	chr11:82733026:-	CDHR2^ENSG00000074276.10	chr5:176577537:+	LH00995:25:23T55JLT4:8:1405:40876:20351	.	NO_LDAS	0.0034	GT	1.8892	AG	1.7232	"[""INTERCHROMOSOMAL[chr11--chr5]""]"	chr11:82733026-chr5:176577537	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
F8--BX571846.1	1	0	1.0	0.0	ONLY_REF_SPLICE	F8^ENSG00000185010.15	chrX:154886134:-	BX571846.1^ENSG00000225393.1	chrX:155486583:+	LH00995:25:23T55JLT4:5:2396:49904:14354	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7465	"[""INTRACHROMOSOMAL[chrX:0.44Mb]""]"	chrX:154886134-chrX:155486583	False			0	Read count too low: 1 < 8	FAIL	1
EME1--DTD2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EME1^ENSG00000154920.15	chr17:50381488:+	DTD2^ENSG00000129480.13	chr14:31448330:-	LH00995:25:23T55JLT4:8:2496:19380:23139	.	NO_LDAS	0.0034	GT	1.6402	AG	1.6729	"[""INTERCHROMOSOMAL[chr17--chr14]""]"	chr17:50381488-chr14:31448330	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DPH5--LDHAL6EP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DPH5^ENSG00000117543.21	chr1:100992637:-	LDHAL6EP^ENSG00000270098.1	chr4:71436985:-	LH00995:25:23T55JLT4:5:1290:1558:22537	.	NO_LDAS	0.0034	GT	1.4295	AG	1.1589	"[""INTERCHROMOSOMAL[chr1--chr4]""]"	chr1:100992637-chr4:71436985	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DMRTA1--LINC01239	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DMRTA1^ENSG00000176399.4	chr9:22447732:+	LINC01239^ENSG00000234840.2	chr9:22646223:+	LH00995:25:23T55JLT4:6:1179:17787:24611	.	YES_LDAS	0.0034	GT	1.6402	AG	1.3996	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr9:0.19Mb]""]"	chr9:22447732-chr9:22646223	False			0	Read count too low: 1 < 8	FAIL	1
DLG2--TMEM126A	1	0	1.0	0.0	ONLY_REF_SPLICE	DLG2^ENSG00000150672.18	chr11:85598657:-	TMEM126A^ENSG00000171202.7	chr11:85654063:+	LH00995:25:23T55JLT4:6:1336:41531:10192	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7968	"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""LOCAL_INVERSION:-:+:[20045]""]"	chr11:85598657-chr11:85654063	False			0	Read count too low: 1 < 8	FAIL	1
DIP2C-AS1--KCP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DIP2C-AS1^ENSG00000180525.13	chr10:663867:+	KCP^ENSG00000135253.15	chr7:128863062:-	LH00995:25:23T55JLT4:8:1381:35213:25928	.	YES_LDAS	0.0034	AT	1.3753	AC	1.9656	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:663867-chr7:128863062	False			0	Read count too low: 1 < 8	FAIL	1
CYP2E1--SCART1	1	0	1.0	0.0	ONLY_REF_SPLICE	CYP2E1^ENSG00000130649.10	chr10:133527572:+	SCART1^ENSG00000214279.13	chr10:133491222:+	LH00995:25:23T55JLT4:8:2293:38578:27721	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[3152]""]"	chr10:133527572-chr10:133491222	False			0	Read count too low: 1 < 8	FAIL	1
CYP2D6--PRR15	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CYP2D6^ENSG00000100197.23	chr22:42126631:-	PRR15^ENSG00000176532.4	chr7:29566681:+	LH00995:25:23T55JLT4:6:2269:21759:17619	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8256	"[""INTERCHROMOSOMAL[chr22--chr7]""]"	chr22:42126631-chr7:29566681	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CYB5D1--CFAP251	1	0	1.0	0.0	ONLY_REF_SPLICE	CYB5D1^ENSG00000182224.12	chr17:7858824:+	CFAP251^ENSG00000158023.10	chr12:121954120:+	LH00995:25:23T55JLT4:5:2311:35827:23658	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8256	"[""INTERCHROMOSOMAL[chr17--chr12]""]"	chr17:7858824-chr12:121954120	False			0	Read count too low: 1 < 8	FAIL	1
CXorf56--AL137786.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CXorf56^ENSG00000018610.15	chrX:119560305:-	AL137786.1^ENSG00000258702.3	chr14:96605425:+	LH00995:25:23T55JLT4:5:1318:36895:6367	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr14]""]"	chrX:119560305-chr14:96605425	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CX3CR1--AC009630.3	1	0	0.2	0.0	INCL_NON_REF_SPLICE	CX3CR1^ENSG00000168329.14	chr3:39266502:-	AC009630.3^ENSG00000264578.1	chr8:41609937:-	LH00995:25:23T55JLT4:5:2463:19801:4083	.	NO_LDAS	0.0007	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr8]""]"	chr3:39266502-chr8:41609937	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CRYM-AS1--AC008740.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CRYM-AS1^ENSG00000189149.12	chr16:21342586:+	AC008740.1^ENSG00000257403.2	chr16:21347155:+	LH00995:25:23T55JLT4:6:2464:18539:19748	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[8102]""]"	chr16:21342586-chr16:21347155	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
CPS1--HBE1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CPS1^ENSG00000021826.17	chr2:210592956:+	HBE1^ENSG00000213931.7	chr11:5268477:-	LH00995:25:23T55JLT4:6:2456:38190:12924	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr2--chr11]""]"	chr2:210592956-chr11:5268477	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CNTNAP3C--BX005040.4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CNTNAP3C^ENSG00000283378.1	chr9:61453030:+	BX005040.4^ENSG00000283541.1	chr9:61097036:-	LH00995:25:23T55JLT4:6:2192:40892:27329	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8323	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61453030-chr9:61097036	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CFAP20DC--GABRQ	1	0	0.33	0.0	INCL_NON_REF_SPLICE	CFAP20DC^ENSG00000163689.20	chr3:59047177:-	GABRQ^ENSG00000268089.3	chrX:152653125:+	LH00995:25:23T55JLT4:6:2368:31742:29193	.	NO_LDAS	0.0011	GT	1.8892	AG	1.6049	"[""INTERCHROMOSOMAL[chr3--chrX]""]"	chr3:59047177-chrX:152653125	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CEACAM4--PSG5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CEACAM4^ENSG00000105352.10	chr19:41627061:-	PSG5^ENSG00000204941.14	chr19:43186609:-	LH00995:25:23T55JLT4:5:2113:31143:13527	.	NO_LDAS	0.0034	GT	1.4295	AG	1.3996	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:1.54Mb]""]"	chr19:41627061-chr19:43186609	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
CD58--INKA2-AS1	1	0	1.0	0.0	ONLY_REF_SPLICE	CD58^ENSG00000116815.16	chr1:116570903:-	INKA2-AS1^ENSG00000227811.3	chr1:111746060:+	LH00995:25:23T55JLT4:5:2274:38489:20421	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:4.77Mb]""]"	chr1:116570903-chr1:111746060	False			0	Read count too low: 1 < 8	FAIL	1
CCL11--RAD51AP2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CCL11^ENSG00000172156.4	chr17:34288083:+	RAD51AP2^ENSG00000214842.5	chr2:17515906:-	LH00995:25:23T55JLT4:5:2304:31119:10234	.	NO_LDAS	0.0017	GT	1.7968	AG	1.9219	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:34288083-chr2:17515906	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CCL11--KRT18P61	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CCL11^ENSG00000172156.4	chr17:34288083:+	KRT18P61^ENSG00000267083.1	chr17:60810827:+	LH00995:25:23T55JLT4:5:2304:31119:10234	.	NO_LDAS	0.0017	GT	1.7968	AG	1.8295	"[""INTRACHROMOSOMAL[chr17:26.52Mb]""]"	chr17:34288083-chr17:60810827	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CCDC74A--NOMO3	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CCDC74A^ENSG00000163040.15	chr2:131532781:+	NOMO3^ENSG00000103226.19	chr16:16275187:+	LH00995:25:23T55JLT4:6:1307:47938:5736	.	YES_LDAS	0.0017	GT	1.8256	AG	1.9899	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:131532781-chr16:16275187	False			0	Read count too low: 1 < 8	FAIL	1
CCDC62--AL035458.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	CCDC62^ENSG00000130783.14	chr12:122813419:+	AL035458.1^ENSG00000236456.1	chr20:34246332:-	LH00995:25:23T55JLT4:8:2410:34889:14410	.	NO_LDAS	0.0011	GT	1.9329	AG	1.3996	"[""INTERCHROMOSOMAL[chr12--chr20]""]"	chr12:122813419-chr20:34246332	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CAPS2--SLAMF6	1	0	1.0	0.0	ONLY_REF_SPLICE	CAPS2^ENSG00000180881.19	chr12:75390322:-	SLAMF6^ENSG00000162739.14	chr1:160496393:-	LH00995:25:23T55JLT4:6:1124:40309:23798	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:75390322-chr1:160496393	False			0	Read count too low: 1 < 8	FAIL	1
CAPN10-DT--IQCB1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CAPN10-DT^ENSG00000260942.1	chr2:240585141:-	IQCB1^ENSG00000173226.17	chr3:121770488:-	LH00995:25:23T55JLT4:6:1489:44605:11733	.	YES_LDAS	0.0034	GT	1.9656	AG	1.6402	"[""INTERCHROMOSOMAL[chr2--chr3]""]"	chr2:240585141-chr3:121770488	False			0	Read count too low: 1 < 8	FAIL	1
CALR4P--CARF	1	0	0.5	0.0	ONLY_REF_SPLICE	CALR4P^ENSG00000227742.2	chr1:51582824:-	CARF^ENSG00000138380.18	chr2:202952559:+	LH00995:25:23T55JLT4:8:1473:4204:3438	.	NO_LDAS	0.0017	GT	1.9329	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:51582824-chr2:202952559	False			0	Read count too low: 1 < 8	FAIL	1
C3orf33--RPS15AP9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	C3orf33^ENSG00000174928.16	chr3:155806139:-	RPS15AP9^ENSG00000228453.1	chr1:117138256:+	LH00995:25:23T55JLT4:6:1242:25238:21766	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7968	"[""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:155806139-chr1:117138256	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
C1D--SPAG16	1	0	1.0	0.0	ONLY_REF_SPLICE	C1D^ENSG00000197223.12	chr2:68046344:-	SPAG16^ENSG00000144451.19	chr2:213297262:+	LH00995:25:23T55JLT4:6:2335:49928:23280	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8295	"[""INTRACHROMOSOMAL[chr2:145.17Mb]""]"	chr2:68046344-chr2:213297262	False			0	Read count too low: 1 < 8	FAIL	1
C11orf21--AP002784.1	1	0	1.0	0.0	ONLY_REF_SPLICE	C11orf21^ENSG00000110665.12	chr11:2301756:-	AP002784.1^ENSG00000250519.7	chr11:94276957:+	LH00995:25:23T55JLT4:8:1159:9244:26825	.	YES_LDAS	0.0034	GT	1.371	AG	1.6729	"[""INTRACHROMOSOMAL[chr11:91.88Mb]""]"	chr11:2301756-chr11:94276957	False			0	Read count too low: 1 < 8	FAIL	1
BX119927.1--LMTK3	1	0	0.25	0.0	INCL_NON_REF_SPLICE	BX119927.1^ENSG00000283178.1	chrX:71869762:-	LMTK3^ENSG00000142235.12	chr19:48497589:-	LH00995:25:23T55JLT4:6:1282:41668:19006	.	NO_LDAS	0.0008	GT	1.9899	AG	1.7056	"[""INTERCHROMOSOMAL[chrX--chr19]""]"	chrX:71869762-chr19:48497589	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BRICD5--AC096915.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	BRICD5^ENSG00000182685.7	chr16:2209249:-	AC096915.1^ENSG00000226082.2	chr3:62926422:+	LH00995:25:23T55JLT4:8:2427:49411:15405	.	YES_LDAS	0.0017	GT	1.8892	AG	1.6729	"[""INTERCHROMOSOMAL[chr16--chr3]""]"	chr16:2209249-chr3:62926422	False			0	Read count too low: 1 < 8	FAIL	1
BFSP1--INO80C	1	0	1.0	0.0	ONLY_REF_SPLICE	BFSP1^ENSG00000125864.14	chr20:17524848:-	INO80C^ENSG00000153391.16	chr18:35478349:-	LH00995:25:23T55JLT4:5:1294:31135:4741	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr20--chr18]""]"	chr20:17524848-chr18:35478349	False			0	Read count too low: 1 < 8	FAIL	1
B3GNT2--AL031666.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	B3GNT2^ENSG00000170340.11	chr2:62222426:+	AL031666.2^ENSG00000267882.2	chr20:47318549:+	LH00995:25:23T55JLT4:6:2111:26799:13877	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr20]""]"	chr2:62222426-chr20:47318549	False			0	Read count too low: 1 < 8	FAIL	1
ATOH8--HLA-DOB	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ATOH8^ENSG00000168874.13	chr2:85764165:+	HLA-DOB^ENSG00000241106.8	chr6:32820529:-	LH00995:25:23T55JLT4:6:2412:23320:10178	.	YES_LDAS	0.0034	GT	1.7465	AG	1.231	"[""INTERCHROMOSOMAL[chr2--chr6]""]"	chr2:85764165-chr6:32820529	False			0	Read count too low: 1 < 8	FAIL	1
ASGR1--PPP1R14BP4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ASGR1^ENSG00000141505.12	chr17:7178040:-	PPP1R14BP4^ENSG00000270889.1	chr7:35971447:-	LH00995:25:23T55JLT4:5:1321:43748:28997	.	NO_LDAS	0.0034	GT	1.2366	AG	1.7819	"[""INTERCHROMOSOMAL[chr17--chr7]""]"	chr17:7178040-chr7:35971447	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ASB7--AC087762.1	1	0	1.0	0.0	ONLY_REF_SPLICE	ASB7^ENSG00000183475.13	chr15:100630042:+	AC087762.1^ENSG00000259579.1	chr15:100819414:+	LH00995:25:23T55JLT4:8:1262:31224:24288	.	YES_LDAS	0.0034	GT	1.7232	AG	1.8323	"[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[64548]""]"	chr15:100630042-chr15:100819414	False			0	Read count too low: 1 < 8	FAIL	1
ARMC4--COMMD8	1	0	1.0	0.0	ONLY_REF_SPLICE	ARMC4^ENSG00000169126.16	chr10:27853242:-	COMMD8^ENSG00000169019.11	chr4:47453214:-	LH00995:25:23T55JLT4:5:2353:31119:9169	.	YES_LDAS	0.0034	GC	1.9329	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr4]""]"	chr10:27853242-chr4:47453214	False			0	Read count too low: 1 < 8	FAIL	1
AP006623.1--AC120114.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP006623.1^ENSG00000250397.2	chr11:857426:-	AC120114.2^ENSG00000278713.1	chr16:29862999:+	LH00995:25:23T55JLT4:6:1188:19502:9898	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr11--chr16]""]"	chr11:857426-chr16:29862999	False			0	Read count too low: 1 < 8	FAIL	1
AP001107.2--LEO1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP001107.2^ENSG00000254452.1	chr11:66276799:-	LEO1^ENSG00000166477.13	chr15:51949874:-	LH00995:25:23T55JLT4:5:2261:11452:21934	.	NO_LDAS	0.0034	GT	1.7968	AG	1.231	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:66276799-chr15:51949874	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AP000879.1--SUSD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP000879.1^ENSG00000254721.1	chr11:70206190:-	SUSD1^ENSG00000106868.17	chr9:112142358:-	LH00995:25:23T55JLT4:5:1250:15012:17366	.	NO_LDAS	0.0034	GC	1.9329	AG	1.7968	"[""INTERCHROMOSOMAL[chr11--chr9]""]"	chr11:70206190-chr9:112142358	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AP000851.1--CCDC28A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP000851.1^ENSG00000256916.1	chr11:102607824:+	CCDC28A^ENSG00000024862.18	chr6:138776147:+	LH00995:25:23T55JLT4:6:2407:31216:18445	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9219	"[""INTERCHROMOSOMAL[chr11--chr6]""]"	chr11:102607824-chr6:138776147	False			0	Read count too low: 1 < 8	FAIL	1
AP000695.1--CRYZL1	1	0	1.0	0.0	ONLY_REF_SPLICE	AP000695.1^ENSG00000230479.1	chr21:36430412:+	CRYZL1^ENSG00000205758.12	chr21:33616750:-	LH00995:25:23T55JLT4:6:1265:26443:6647	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8256	"[""INTRACHROMOSOMAL[chr21:2.79Mb]""]"	chr21:36430412-chr21:33616750	False			0	Read count too low: 1 < 8	FAIL	1
ANKRD18B--CTSV	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ANKRD18B^ENSG00000230453.9	chr9:33572369:+	CTSV^ENSG00000136943.12	chr9:97153738:-	LH00995:25:23T55JLT4:5:2273:30399:12266	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTRACHROMOSOMAL[chr9:63.46Mb]""]"	chr9:33572369-chr9:97153738	False			0	Read count too low: 1 < 8	FAIL	1
AL589935.1--GPALPP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL589935.1^ENSG00000232295.7	chr6:71302954:-	GPALPP1^ENSG00000133114.18	chr13:45027838:+	LH00995:25:23T55JLT4:8:1324:47429:10542	.	NO_LDAS	0.0034	GC	1.6895	AG	1.9086	"[""INTERCHROMOSOMAL[chr6--chr13]""]"	chr6:71302954-chr13:45027838	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL589765.5--SLAMF1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL589765.5^ENSG00000268288.1	chr1:151766710:-	SLAMF1^ENSG00000117090.15	chr1:160637218:-	LH00995:25:23T55JLT4:6:1225:8904:10402	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8256	"[""INTRACHROMOSOMAL[chr1:8.84Mb]""]"	chr1:151766710-chr1:160637218	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL513323.1--OR10J3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL513323.1^ENSG00000228560.1	chr1:159468842:-	OR10J3^ENSG00000196266.5	chr1:159314684:-	LH00995:25:23T55JLT4:5:1374:26354:14844	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[31507]""]"	chr1:159468842-chr1:159314684	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL391560.2--AP001271.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AL391560.2^ENSG00000287887.1	chr13:24752283:+	AP001271.2^ENSG00000279459.1	chr11:70604435:+	LH00995:25:23T55JLT4:6:1264:40576:21010	.	NO_LDAS	0.0017	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr13--chr11]""]"	chr13:24752283-chr11:70604435	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL359771.1--NPM1P40	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL359771.1^ENSG00000237445.2	chr1:13657302:-	NPM1P40^ENSG00000236523.2	chr1:203256068:+	LH00995:25:23T55JLT4:8:1383:42138:13793	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7056	"[""INTRACHROMOSOMAL[chr1:189.60Mb]""]"	chr1:13657302-chr1:203256068	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL359258.2--AC104134.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AL359258.2^ENSG00000260879.1	chr1:108200042:+	AC104134.1^ENSG00000225420.1	chr2:88574861:+	LH00995:25:23T55JLT4:8:1368:23725:27273	.	YES_LDAS	0.0017	GT	1.7465	AG	1.1589	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:108200042-chr2:88574861	False			0	Read count too low: 1 < 8	FAIL	1
AL162231.5--AL589645.1	1	0	1.0	0.0	ONLY_REF_SPLICE	AL162231.5^ENSG00000288583.1	chr9:34703038:+	AL589645.1^ENSG00000287368.1	chr9:34889579:+	LH00995:25:23T55JLT4:2:1116:39266:13611	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9899	"[""INTRACHROMOSOMAL[chr9:0.04Mb]"",""NEIGHBORS[35554]""]"	chr9:34703038-chr9:34889579	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AL139353.1--ZNF675	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL139353.1^ENSG00000203546.7	chr14:31453275:-	ZNF675^ENSG00000197372.10	chr19:23534298:-	LH00995:25:23T55JLT4:6:1296:6210:19748	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr19]""]"	chr14:31453275-chr19:23534298	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AL139220.2--KLF17	1	0	1.0	0.0	ONLY_REF_SPLICE	AL139220.2^ENSG00000230615.7	chr1:44051531:+	KLF17^ENSG00000171872.5	chr1:44129353:+	LH00995:25:23T55JLT4:8:1439:31888:20925	.	YES_LDAS	0.0034	GT	1.7056	AG	1.8295	"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[2908]""]"	chr1:44051531-chr1:44129353	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AL139220.2--KLF17	1	0	1.0	0.0	ONLY_REF_SPLICE	AL139220.2^ENSG00000230615.7	chr1:44051494:+	KLF17^ENSG00000171872.5	chr1:44129353:+	LH00995:25:23T55JLT4:6:1124:26629:18207	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[2908]""]"	chr1:44051494-chr1:44129353	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AL139042.1--CNR1	1	0	1.0	0.0	ONLY_REF_SPLICE	AL139042.1^ENSG00000234426.3	chr6:88420944:-	CNR1^ENSG00000118432.12	chr6:88145337:-	LH00995:25:23T55JLT4:6:1248:22050:27988	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[11445]""]"	chr6:88420944-chr6:88145337	False			0	Read count too low: 1 < 8	FAIL	1
AL139042.1--CNR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL139042.1^ENSG00000234426.3	chr6:88304040:-	CNR1^ENSG00000118432.12	chr6:88145337:-	LH00995:25:23T55JLT4:6:1396:20012:16722	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8256	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[11445]""]"	chr6:88304040-chr6:88145337	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AL137139.2--RIC3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL137139.2^ENSG00000286757.2	chr13:99842570:-	RIC3^ENSG00000166405.15	chr11:8140193:-	LH00995:25:23T55JLT4:5:2140:39589:24709	.	NO_LDAS	0.0034	GT	1.7465	AG	1.9086	"[""INTERCHROMOSOMAL[chr13--chr11]""]"	chr13:99842570-chr11:8140193	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL135910.1--AL009176.1	1	0	1.0	0.0	ONLY_REF_SPLICE	AL135910.1^ENSG00000272848.2	chr6:169430641:-	AL009176.1^ENSG00000285887.1	chr6:169421174:-	LH00995:25:23T55JLT4:5:2319:26953:5932	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7819	"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[1264]""]"	chr6:169430641-chr6:169421174	False			0	Read count too low: 1 < 8	FAIL	1
AL035587.1--GNMT	1	0	1.0	0.0	ONLY_REF_SPLICE	AL035587.1^ENSG00000231113.2	chr6:42943970:+	GNMT^ENSG00000124713.6	chr6:42962212:+	LH00995:25:23T55JLT4:5:2481:41329:4797	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[12394]""]"	chr6:42943970-chr6:42962212	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AKR1C1--AKR1E2	1	0	0.33	0.0	ONLY_REF_SPLICE	AKR1C1^ENSG00000187134.14	chr10:4972749:+	AKR1E2^ENSG00000165568.18	chr10:4830675:+	LH00995:25:23T55JLT4:5:1464:11250:9057	.	YES_LDAS	0.0011	GT	1.7819	AG	1.9899	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr10:0.12Mb]""]"	chr10:4972749-chr10:4830675	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
AF279873.3--TOX	1	0	1.0	0.0	ONLY_REF_SPLICE	AF279873.3^ENSG00000253642.6	chr8:33796436:+	TOX^ENSG00000198846.6	chr8:58960008:-	LH00995:25:23T55JLT4:5:1114:22544:8889	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9329	"[""INTRACHROMOSOMAL[chr8:24.77Mb]""]"	chr8:33796436-chr8:58960008	False			0	Read count too low: 1 < 8	FAIL	1
ADAMTS8--RAB29	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ADAMTS8^ENSG00000134917.10	chr11:130411455:-	RAB29^ENSG00000117280.13	chr1:205768467:-	LH00995:25:23T55JLT4:6:1385:6881:12532	.	YES_LDAS	0.0034	GT	1.7465	AG	1.3996	"[""INTERCHROMOSOMAL[chr11--chr1]""]"	chr11:130411455-chr1:205768467	False			0	Read count too low: 1 < 8	FAIL	1
ACTR3C--AC092681.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACTR3C^ENSG00000106526.10	chr7:150293312:-	AC092681.1^ENSG00000224016.2	chr7:149909705:-	LH00995:25:23T55JLT4:8:1283:7860:21094	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9899	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]"	chr7:150293312-chr7:149909705	False			0	Read count too low: 1 < 8	FAIL	1
ACP6--NDP-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACP6^ENSG00000162836.12	chr1:147648246:-	NDP-AS1^ENSG00000236276.2	chrX:43969926:+	LH00995:25:23T55JLT4:5:1287:38999:10682	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chrX]""]"	chr1:147648246-chrX:43969926	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC245100.7--AC239800.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	AC245100.7^ENSG00000285062.1	chr1:148459602:-	AC239800.1^ENSG00000223779.6	chr1:143745217:+	LH00995:25:23T55JLT4:6:1321:2019:17450	.	NO_LDAS	0.0008	GT	1.9329	AG	1.8295	"[""INTRACHROMOSOMAL[chr1:4.70Mb]""]"	chr1:148459602-chr1:143745217	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC244034.1--RPL7AP51	1	0	0.25	0.0	INCL_NON_REF_SPLICE	AC244034.1^ENSG00000234981.1	chr1:206529243:+	RPL7AP51^ENSG00000226448.1	chr10:67334430:+	LH00995:25:23T55JLT4:6:1342:47129:13639	.	NO_LDAS	0.0008	GC	1.2729	AG	1.3383	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:206529243-chr10:67334430	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC242842.2--TRIM36	1	0	0.17	0.0	ONLY_REF_SPLICE	AC242842.2^ENSG00000284964.1	chr1:149607554:+	TRIM36^ENSG00000152503.10	chr5:115171222:-	LH00995:25:23T55JLT4:8:1491:23070:4279	.	YES_LDAS	0.0006	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:149607554-chr5:115171222	False			0	Read count too low: 1 < 8	FAIL	1
AC116667.2--CERS4	1	0	1.0	0.0	ONLY_REF_SPLICE	AC116667.2^ENSG00000284675.1	chr16:73134612:+	CERS4^ENSG00000090661.12	chr19:8254499:+	LH00995:25:23T55JLT4:6:2284:20238:9519	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr16--chr19]""]"	chr16:73134612-chr19:8254499	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AC116036.1--KCTD6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC116036.1^ENSG00000236722.1	chr3:58511668:+	KCTD6^ENSG00000168301.13	chr3:58498713:+	LH00995:25:23T55JLT4:5:1176:52113:21794	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8950]""]"	chr3:58511668-chr3:58498713	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC110794.1--COL22A1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC110794.1^ENSG00000248249.1	chr4:175962300:+	COL22A1^ENSG00000169436.17	chr8:138676594:-	LH00995:25:23T55JLT4:6:2434:14057:5960	.	YES_LDAS	0.0017	GT	1.5546	AG	1.8323	"[""INTERCHROMOSOMAL[chr4--chr8]""]"	chr4:175962300-chr8:138676594	False			0	Read count too low: 1 < 8	FAIL	1
AC108161.1--GMNN	1	0	0.2	0.0	INCL_NON_REF_SPLICE	AC108161.1^ENSG00000226439.3	chr4:61775614:-	GMNN^ENSG00000112312.10	chr6:24781477:+	LH00995:25:23T55JLT4:8:2142:17932:10935	.	YES_LDAS	0.0007	GT	1.7465	AG	1.8256	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:61775614-chr6:24781477	False			0	Read count too low: 1 < 8	FAIL	1
AC106791.1--KLHL3	1	0	1.0	0.0	ONLY_REF_SPLICE	AC106791.1^ENSG00000250159.7	chr5:137858428:-	KLHL3^ENSG00000146021.15	chr5:137709856:-	LH00995:25:23T55JLT4:5:1202:6461:19398	.	YES_LDAS	0.0034	GT	1.7232	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.07Mb]"",""NEIGHBORS[73691]""]"	chr5:137858428-chr5:137709856	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC106782.3--AC026468.1	1	0	0.1	0.0	ONLY_REF_SPLICE	AC106782.3^ENSG00000261444.1	chr16:30214438:+	AC026468.1^ENSG00000277003.1	chr16:69975238:+	LH00995:25:23T55JLT4:6:2309:44370:24330	.	NO_LDAS	0.0003	GT	1.9899	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:39.76Mb]""]"	chr16:30214438-chr16:69975238	False			0	Read count too low: 1 < 8	FAIL	1
AC100797.4--GPRIN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC100797.4^ENSG00000282375.1	chr8:739014:+	GPRIN1^ENSG00000169258.7	chr5:176597677:-	LH00995:25:23T55JLT4:5:2289:16444:9085	.	NO_LDAS	0.0034	GT	0.9183	AG	1.1589	"[""INTERCHROMOSOMAL[chr8--chr5]""]"	chr8:739014-chr5:176597677	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AC093909.1--ACTBP8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC093909.1^ENSG00000180015.12	chr4:188738766:+	ACTBP8^ENSG00000220267.1	chr6:88275923:-	LH00995:25:23T55JLT4:6:1303:49936:26096	.	NO_LDAS	0.0034	GT	1.8295	AG	1.6895	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:188738766-chr6:88275923	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC092969.1--EPHB1	1	0	1.0	0.0	ONLY_REF_SPLICE	AC092969.1^ENSG00000240086.7	chr3:135379262:-	EPHB1^ENSG00000154928.18	chr3:135106448:+	LH00995:25:23T55JLT4:6:2184:5223:13947	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:0.12Mb]""]"	chr3:135379262-chr3:135106448	False			0	Read count too low: 1 < 8	FAIL	1
AC092747.2--MED21	1	0	1.0	0.0	ONLY_REF_SPLICE	AC092747.2^ENSG00000256625.1	chr12:27123381:+	MED21^ENSG00000152944.9	chr12:27030158:+	LH00995:25:23T55JLT4:8:2379:6833:25788	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[55567]""]"	chr12:27123381-chr12:27030158	False			0	Read count too low: 1 < 8	FAIL	1
AC092691.1--LSAMP	1	0	1.0	0.0	ONLY_REF_SPLICE	AC092691.1^ENSG00000239268.3	chr3:117997182:-	LSAMP^ENSG00000185565.12	chr3:116086556:-	LH00995:25:23T55JLT4:6:2347:20618:11972	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.53Mb]""]"	chr3:117997182-chr3:116086556	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC092666.2--AC092681.1	1	0	0.5	0.0	ONLY_REF_SPLICE	AC092666.2^ENSG00000276538.1	chr7:150047609:-	AC092681.1^ENSG00000224016.2	chr7:149891301:-	LH00995:25:23T55JLT4:8:2316:18944:24905	.	YES_LDAS	0.0017	GT	1.6895	AG	1.9899	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.14Mb]""]"	chr7:150047609-chr7:149891301	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC092473.2--LRRC20	1	0	1.0	0.0	ONLY_REF_SPLICE	AC092473.2^ENSG00000287098.1	chrX:40620701:-	LRRC20^ENSG00000172731.14	chr10:70340702:-	LH00995:25:23T55JLT4:5:1349:48699:4167	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chrX--chr10]""]"	chrX:40620701-chr10:70340702	False			0	Read count too low: 1 < 8	FAIL	1
AC091564.2--AC097381.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	AC091564.2^ENSG00000254400.1	chr11:6604281:-	AC097381.1^ENSG00000228919.5	chr4:7939661:+	LH00995:25:23T55JLT4:6:2277:36790:15096	.	NO_LDAS	0.0008	GT	1.8892	AG	1.6402	"[""INTERCHROMOSOMAL[chr11--chr4]""]"	chr11:6604281-chr4:7939661	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC091564.2--AC092069.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091564.2^ENSG00000254400.1	chr11:6604281:-	AC092069.1^ENSG00000267458.1	chr19:12944159:-	LH00995:25:23T55JLT4:5:2480:27228:10921	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr11--chr19]""]"	chr11:6604281-chr19:12944159	False			0	Read count too low: 1 < 8	FAIL	1
AC091180.3--RANBP20P	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091180.3^ENSG00000250186.3	chr17:49405063:+	RANBP20P^ENSG00000259144.2	chr14:20722114:-	LH00995:25:23T55JLT4:6:1146:38408:22355	.	YES_LDAS	0.0017	GT	1.7968	AG	1.7056	"[""INTERCHROMOSOMAL[chr17--chr14]""]"	chr17:49405063-chr14:20722114	False			0	Read count too low: 1 < 8	FAIL	1
AC091042.1--AC018695.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC091042.1^ENSG00000265936.1	chr18:67375292:+	AC018695.1^ENSG00000214259.3	chr16:85815884:-	LH00995:25:23T55JLT4:8:2469:50074:24288	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr18--chr16]""]"	chr18:67375292-chr16:85815884	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AC087620.1--AC116913.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC087620.1^ENSG00000253754.1	chr8:108227484:+	AC116913.1^ENSG00000261351.2	chr15:66490680:-	LH00995:25:23T55JLT4:6:2298:51061:17815	.	YES_LDAS	0.0017	GT	1.6895	AG	1.5656	"[""INTERCHROMOSOMAL[chr8--chr15]""]"	chr8:108227484-chr15:66490680	False			0	Read count too low: 1 < 8	FAIL	1
AC087280.2--OR2AG2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC087280.2^ENSG00000283415.2	chr11:6924498:-	OR2AG2^ENSG00000188124.3	chr11:6768976:-	LH00995:25:23T55JLT4:5:1195:51207:19973	.	YES_LDAS	0.0034	GT	1.6895	AG	1.3753	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.05Mb]"",""NEIGHBORS[49966]""]"	chr11:6924498-chr11:6768976	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
AC087280.2--EOGT	1	0	1.0	0.0	ONLY_REF_SPLICE	AC087280.2^ENSG00000283415.2	chr11:6850754:-	EOGT^ENSG00000163378.14	chr3:68989017:-	LH00995:25:23T55JLT4:8:1338:18256:17801	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:6850754-chr3:68989017	False			0	Read count too low: 1 < 8	FAIL	1
AC068700.2--IL7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC068700.2^ENSG00000286675.1	chr8:78630314:-	IL7^ENSG00000104432.14	chr8:78740082:-	LH00995:25:23T55JLT4:5:2155:38384:17380	.	YES_LDAS	0.0034	GT	1.6049	AG	1.6402	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9761]""]"	chr8:78630314-chr8:78740082	False			0	Read count too low: 1 < 8	FAIL	1
AC027097.1--MS4A14	1	0	1.0	0.0	ONLY_REF_SPLICE	AC027097.1^ENSG00000267040.6	chr18:57642052:+	MS4A14^ENSG00000166928.11	chr11:60415437:+	LH00995:25:23T55JLT4:8:2324:22212:10220	.	NO_LDAS	0.0034	GT	1.7232	AG	1.2419	"[""INTERCHROMOSOMAL[chr18--chr11]""]"	chr18:57642052-chr11:60415437	False			0	Read count too low: 1 < 8	FAIL	1
AC025259.1--SNRK-AS1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC025259.1^ENSG00000257663.1	chr12:52077124:-	SNRK-AS1^ENSG00000234617.2	chr3:43347775:-	LH00995:25:23T55JLT4:6:1188:45940:5246	.	YES_LDAS	0.0017	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:52077124-chr3:43347775	False			0	Read count too low: 1 < 8	FAIL	1
AC023908.3--FAM122C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC023908.3^ENSG00000261136.1	chr15:39783065:+	FAM122C^ENSG00000156500.15	chrX:134845205:+	LH00995:25:23T55JLT4:8:1463:2820:2107	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""INTERCHROMOSOMAL[chr15--chrX]""]"	chr15:39783065-chrX:134845205	False			0	Read count too low: 1 < 8	FAIL	1
AC021851.1--NUP35	1	0	1.0	0.0	ONLY_REF_SPLICE	AC021851.1^ENSG00000272800.3	chr2:183182680:+	NUP35^ENSG00000163002.13	chr2:183151508:+	LH00995:25:23T55JLT4:6:1145:36790:2794	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]"	chr2:183182680-chr2:183151508	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC019186.1--ACVR1C	1	0	1.0	0.0	ONLY_REF_SPLICE	AC019186.1^ENSG00000234584.1	chr2:157735944:-	ACVR1C^ENSG00000123612.16	chr2:157587417:-	LH00995:25:23T55JLT4:5:1197:48383:4069	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.10Mb]"",""NEIGHBORS[96844]""]"	chr2:157735944-chr2:157587417	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC019077.1--STPG2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC019077.1^ENSG00000214559.3	chr4:98261525:-	STPG2^ENSG00000163116.10	chr4:97981318:-	LH00995:25:23T55JLT4:8:2155:50398:21122	.	YES_LDAS	0.0034	GT	1.371	AG	1.7968	"[""INTRACHROMOSOMAL[chr4:0.11Mb]""]"	chr4:98261525-chr4:97981318	False			0	Read count too low: 1 < 8	FAIL	1
AC016629.1--RPL23AP82	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC016629.1^ENSG00000269032.1	chr19:58589114:+	RPL23AP82^ENSG00000184319.16	chr22:50788895:+	LH00995:25:23T55JLT4:6:2468:19979:29221	.	NO_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr22]""]"	chr19:58589114-chr22:50788895	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC016405.3--SH2D2A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC016405.3^ENSG00000272384.1	chr8:122780084:-	SH2D2A^ENSG00000027869.12	chr1:156809490:-	LH00995:25:23T55JLT4:5:2277:49111:6871	.	NO_LDAS	0.0034	GT	1.3996	AG	1.5546	"[""INTERCHROMOSOMAL[chr8--chr1]""]"	chr8:122780084-chr1:156809490	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC010307.1--RPL6P27	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC010307.1^ENSG00000240611.1	chr5:133172977:-	RPL6P27^ENSG00000235552.4	chr18:6463003:-	LH00995:25:23T55JLT4:6:1128:33643:20968	.	YES_LDAS	0.0034	GT	1.8295	AG	1.5058	"[""INTERCHROMOSOMAL[chr5--chr18]""]"	chr5:133172977-chr18:6463003	False			0	Read count too low: 1 < 8	FAIL	1
AC009315.1--FSIP2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC009315.1^ENSG00000286797.1	chr2:185434191:+	FSIP2^ENSG00000188738.15	chr2:185739346:+	LH00995:25:23T55JLT4:6:1386:3912:17899	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.23Mb]""]"	chr2:185434191-chr2:185739346	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC009220.2--IL3RA	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC009220.2^ENSG00000239254.1	chr7:139172613:-	IL3RA^ENSG00000185291.12	chrX:1341731:+	LH00995:25:23T55JLT4:5:1103:5021:6871	.	NO_LDAS	0.0034	GT	1.8295	AG	1.7465	"[""INTERCHROMOSOMAL[chr7--chrY]""]"	chr7:139172613-chrX:1341731	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC008802.1--AL353691.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC008802.1^ENSG00000254170.1	chr5:78708776:-	AL353691.1^ENSG00000237875.1	chrX:41790238:-	LH00995:25:23T55JLT4:6:1178:37462:28366	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9329	"[""INTERCHROMOSOMAL[chr5--chrX]""]"	chr5:78708776-chrX:41790238	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC008522.1--AC079760.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC008522.1^ENSG00000279232.2	chr5:98793600:-	AC079760.2^ENSG00000243144.7	chr7:91320878:+	LH00995:25:23T55JLT4:6:2260:4349:29305	.	NO_LDAS	0.0017	GC	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr5--chr7]""]"	chr5:98793600-chr7:91320878	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC007216.5--CRYM-AS1	1	0	0.06	0.0	INCL_NON_REF_SPLICE	AC007216.5^ENSG00000277458.1	chr16:11926304:+	CRYM-AS1^ENSG00000189149.12	chr16:21338921:+	LH00995:25:23T55JLT4:6:2131:19599:25395	.	YES_LDAS	0.0002	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:9.37Mb]""]"	chr16:11926304-chr16:21338921	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC007115.1--AC096533.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC007115.1^ENSG00000258148.2	chr12:91193881:+	AC096533.1^ENSG00000236942.1	chr1:205625980:+	LH00995:25:23T55JLT4:6:2154:48796:11285	.	NO_LDAS	0.0017	GT	1.9086	AG	1.6402	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:91193881-chr1:205625980	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC005786.3--ARL15	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC005786.3^ENSG00000267436.1	chr19:3544708:+	ARL15^ENSG00000185305.11	chr5:54310535:-	LH00995:25:23T55JLT4:8:1403:10740:24877	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8295	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:3544708-chr5:54310535	False			0	Read count too low: 1 < 8	FAIL	1
AC005323.2--AC005323.1	1	0	1.0	0.0	ONLY_REF_SPLICE	AC005323.2^ENSG00000272736.5	chr17:10406238:+	AC005323.1^ENSG00000214970.8	chr17:10608354:+	LH00995:25:23T55JLT4:6:1387:22843:7838	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.04Mb]"",""NEIGHBORS[41178]""]"	chr17:10406238-chr17:10608354	False			0	Read count too low: 1 < 8	FAIL	1
AC005255.1--AC108174.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC005255.1^ENSG00000256210.3	chr19:14792465:+	AC108174.1^ENSG00000248112.1	chr5:82921113:-	LH00995:25:23T55JLT4:5:2243:23814:17030	.	YES_LDAS	0.0017	GT	1.9329	AG	1.9899	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:14792465-chr5:82921113	False			0	Read count too low: 1 < 8	FAIL	1
AC004923.1--FAM86B3P	1	0	0.08	0.0	ONLY_REF_SPLICE	AC004923.1^ENSG00000254610.3	chr11:67955482:-	FAM86B3P^ENSG00000173295.8	chr8:8235816:+	LH00995:25:23T55JLT4:8:2143:33231:27091	.	YES_LDAS	0.0003	GT	1.4566	AG	1.7056	"[""INTERCHROMOSOMAL[chr11--chr8]""]"	chr11:67955482-chr8:8235816	False			0	Read count too low: 1 < 8	FAIL	1
AC003035.1--GPM6B	1	0	1.0	0.0	ONLY_REF_SPLICE	AC003035.1^ENSG00000212663.2	chrX:13988690:-	GPM6B^ENSG00000046653.15	chrX:13785808:-	LH00995:25:23T55JLT4:6:1447:51045:18123	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chrX:0.04Mb]"",""NEIGHBORS[41428]""]"	chrX:13988690-chrX:13785808	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ABITRAM--AC021097.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ABITRAM^ENSG00000119328.12	chr9:108936437:+	AC021097.1^ENSG00000272661.1	chr7:151240403:+	LH00995:25:23T55JLT4:5:2444:19413:27735	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8062	"[""INTERCHROMOSOMAL[chr9--chr7]""]"	chr9:108936437-chr7:151240403	False			0	Read count too low: 1 < 8	FAIL	1
ABHD16B--AC092338.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ABHD16B^ENSG00000183260.7	chr20:63861870:+	AC092338.2^ENSG00000260790.1	chr16:22375451:+	LH00995:25:23T55JLT4:6:2145:33732:12686	.	YES_LDAS	0.0034	GT	1.5219	AG	1.8256	"[""INTERCHROMOSOMAL[chr20--chr16]""]"	chr20:63861870-chr16:22375451	False			0	Read count too low: 1 < 8	FAIL	1
ABCA3--RDH5	1	0	1.0	0.0	ONLY_REF_SPLICE	ABCA3^ENSG00000167972.14	chr16:2283186:-	RDH5^ENSG00000135437.10	chr12:55723886:+	LH00995:25:23T55JLT4:2:1150:23304:2499	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9219	"[""INTERCHROMOSOMAL[chr16--chr12]""]"	chr16:2283186-chr12:55723886	False			0	Read count too low: 1 < 8	FAIL	1