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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Demultiplex_Stats.csv
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11.0 KB
Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 07, 2026 11:42 PM

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
4 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1 TAGCGAGGCT-TTGCTCACGG 73870716 72685653 1185063 0 0.0199 0.9840 0.0160 0.0000
4 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1 CCAACTGTAT-GCGCTAGAGA 1817099 1776429 40670 0 0.0005 0.9776 0.0224 0.0000
4 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1 GAGTAGTGAC-GCGATGCCAA 60906193 59771114 1135079 0 0.0164 0.9814 0.0186 0.0000
4 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1 CCAGTATTCT-ACGAAGCGAT 13100222 12870096 230126 0 0.0035 0.9824 0.0176 0.0000
4 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1 ATCATACCGC-ATGTCGTACT 13050340 12819645 230695 0 0.0035 0.9823 0.0177 0.0000
4 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1 ATTCGCACTA-TCTGTATGGT 79447298 78369585 1077713 0 0.0214 0.9864 0.0136 0.0000
4 1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1 CTCTTCAGCA-TTGTCTCTAC 18209007 17799299 409708 0 0.0049 0.9775 0.0225 0.0000
4 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1 CTGTATGCCA-TTCCGGCTGT 88506257 87191480 1314777 0 0.0239 0.9851 0.0149 0.0000
4 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1 TCTGACTATG-TAACCAGATC 43208329 42586494 621835 0 0.0117 0.9856 0.0144 0.0000
4 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1 TGTGACGTAT-GCAGCGTTAG 3429250 3370784 58466 0 0.0009 0.9830 0.0170 0.0000
4 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1 AGAAGATTGG-AGAAGGTACT 48468378 47545568 922810 0 0.0131 0.9810 0.0190 0.0000
4 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1 ATCCAGCATG-AGAGCTCTAC 57750613 56394131 1356482 0 0.0156 0.9765 0.0235 0.0000
4 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1 GCGCCATATA-GAACCTCCTA 34131618 33460899 670719 0 0.0092 0.9803 0.0197 0.0000
4 1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1 CACTCGCATA-GAACGCGACA 35912386 35288750 623636 0 0.0097 0.9826 0.0174 0.0000
4 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1 AAGGTCAATG-GCATTATAGG 33857850 33294078 563772 0 0.0091 0.9833 0.0167 0.0000
4 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1 GTGACGCACA-CGTTGTTGCG 49897025 48948425 948600 0 0.0135 0.9810 0.0190 0.0000
4 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1 TGTCAGGCTT-GATTCCTTAC 74764015 73564985 1199030 0 0.0202 0.9840 0.0160 0.0000
4 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1 CACGTGATGG-TACAACGTGT 1949129 1913227 35902 0 0.0005 0.9816 0.0184 0.0000
4 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1 CCATCACGTG-TCTCCTGGTT 38232485 37168321 1064164 0 0.0103 0.9722 0.0278 0.0000
4 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1 ACCAGGAATT-AGCATGGCAT 82578539 80835462 1743077 0 0.0223 0.9789 0.0211 0.0000
4 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1 TAAGGCTCAC-GACGTTACTT 19177916 18836538 341378 0 0.0052 0.9822 0.0178 0.0000
4 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1 TGGCACTGAT-GCCATAGAAT 91896608 90338080 1558528 0 0.0248 0.9830 0.0170 0.0000
4 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1 CATATGGTGC-ACAGATCTCA 33679142 33080146 598996 0 0.0091 0.9822 0.0178 0.0000
4 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1 GCACTACCAG-GAAGACTTAG 45874700 44643331 1231369 0 0.0124 0.9732 0.0268 0.0000
4 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1 GCATAAGATC-GAGAACTGGA 47102113 46120294 981819 0 0.0127 0.9792 0.0208 0.0000
4 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1 AAGGTGTACT-AGCGCTACAG 1445108 1414212 30896 0 0.0004 0.9786 0.0214 0.0000
4 1173_FM_T1_RNA_SLD_01_A23T55JLT4_1 CTTCTAACCG-TGATCAGTCT 61565449 60479232 1086217 0 0.0166 0.9824 0.0176 0.0000
4 1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1 TCGACCAGCA-GTTCGAACTC 32182433 31594602 587831 0 0.0087 0.9817 0.0183 0.0000
4 1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1 GTGACACGTC-CTTACACTGA 50763118 50003453 759665 0 0.0137 0.9850 0.0150 0.0000
4 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1 AATGGACGCG-AAGTGCACCG 33844708 33008658 836050 0 0.0091 0.9753 0.0247 0.0000
4 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1 TCTCCGTACT-AGTTGTGATC 55946048 54862483 1083565 0 0.0151 0.9806 0.0194 0.0000
4 1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1 TGGAAGCACA-TCCAACACCG 29345814 28772281 573533 0 0.0079 0.9805 0.0195 0.0000
4 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1 GATAGACAAC-GTGTTCACGT 5761250 5650262 110988 0 0.0016 0.9807 0.0193 0.0000
4 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1 AGCGTCTCAT-CCTAGGCGAT 4104524 3771970 332554 0 0.0011 0.9190 0.0810 0.0000
4 1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1 CTCTATACTG-CGTTCAACCG 40549395 39413236 1136159 0 0.0109 0.9720 0.0280 0.0000
4 1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1 ATAGCCGGTT-TCTTATCCGG 66915702 65112688 1803014 0 0.0181 0.9731 0.0269 0.0000
4 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1 GTTCTCATCA-CCTCCATTCT 38044143 37417966 626177 0 0.0103 0.9835 0.0165 0.0000
4 1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1 CAATGCGTGT-ATGTTCGCGC 57448855 56268784 1180071 0 0.0155 0.9795 0.0205 0.0000
4 1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1 TGAGTGTACA-ATTCGCCGGT 44895179 43850603 1044576 0 0.0121 0.9767 0.0233 0.0000
4 1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1 TGCTTCCAAG-CAGATGTTAC 1293951 1268023 25928 0 0.0003 0.9800 0.0200 0.0000
4 1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1 CCTACTCTGC-TGCAATTGGC 13611617 13395822 215795 0 0.0037 0.9841 0.0159 0.0000
4 1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1 TCGCTGAGAG-AATGCTCTAG 553454 539525 13929 0 0.0001 0.9748 0.0252 0.0000
4 1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1 CGCTAATTGC-CCATCGCATT 4395642 4316440 79202 0 0.0012 0.9820 0.0180 0.0000
4 1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1 TCAGCTGTCA-ACAGCTCCTG 50274004 49257938 1016066 0 0.0136 0.9798 0.0202 0.0000
4 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1 AGACGACAGA-GAGCTGGAAT 31335884 30583203 752681 0 0.0085 0.9760 0.0240 0.0000
4 1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1 TAGGTCCAGA-TGCTCATCCG 18678543 17230434 1448109 0 0.0050 0.9225 0.0775 0.0000
4 1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1 TAACCTGAAC-TCAATTGACG 3455936 3394963 60973 0 0.0009 0.9824 0.0176 0.0000
4 1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1 GATAGGTGAA-AGACGCAAGA 29171779 28358445 813334 0 0.0079 0.9721 0.0279 0.0000
4 1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1 CTTGTTACTG-AATTCGGTGG 25655020 25240377 414643 0 0.0069 0.9838 0.0162 0.0000
4 1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1 TCACCGTGGT-TCGCTCTGCT 29300036 28764076 535960 0 0.0079 0.9817 0.0183 0.0000
4 1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1 CAACTACCGC-ATGCTGCAGG 44206467 43396841 809626 0 0.0119 0.9817 0.0183 0.0000
4 1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1 ACTCGTCCAG-TGGTCCTCGT 55970923 54887493 1083430 0 0.0151 0.9806 0.0194 0.0000
4 1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1 TCCGGAGAAC-ATTCCTCTGG 37195449 36496929 698520 0 0.0100 0.9812 0.0188 0.0000
4 1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1 TTGTGAGAAG-TTCACTGGCT 35928367 35338046 590321 0 0.0097 0.9836 0.0164 0.0000
4 1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1 CCGAAGGTTC-TCTATCTGAC 1312466 1293476 18990 0 0.0004 0.9855 0.0145 0.0000
4 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1 ATACACACCT-AGTGTGATAG 43515582 42700630 814952 0 0.0117 0.9813 0.0187 0.0000
4 FFPE_V4_0002_RNA_0001_A23T55JLT4_1 AGCCTCTGCT-TTCGCCTTAG 45059753 43260293 1799460 0 0.0122 0.9601 0.0399 0.0000
4 NTC_0001_0001_A23T55JLT4_1 CGGATCATTA-CCGTAACCTT 2147 2090 57 0 0.0000 0.9735 0.0265 0.0000
4 FFPE_HD789_01_RNA_13_A23T55JLT4_1 CTCTCTCTAG-ACTTGATTGG 75420704 73845954 1574750 0 0.0203 0.9791 0.0209 0.0000
4 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2 AAGGCTCCAT-TGAAGATGGA 25901206 25466834 434372 0 0.0070 0.9832 0.0168 0.0000
4 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2 GATAGATCAG-CGTACGCCAT 18368922 17991883 377039 0 0.0050 0.9795 0.0205 0.0000
4 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2 GCAGAAGTCT-CTGCGTCGAA 52202222 51218551 983671 0 0.0141 0.9812 0.0188 0.0000
4 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2 TATACGATGC-CTCCTAATCT 28920399 28126454 793945 0 0.0078 0.9725 0.0275 0.0000
4 1173_C31_T1_RNA_SLD_01_A23T55JLT4_2 AACGCTCTGA-GAGTAACGTG 19268622 18921625 346997 0 0.0052 0.9820 0.0180 0.0000
4 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2 GATTGGCGAT-CTGTCTCATT 74860213 73181654 1678559 0 0.0202 0.9776 0.0224 0.0000
4 1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2 CAAGACGGAC-GTACTCCGTC 37025716 36417310 608406 0 0.0100 0.9836 0.0164 0.0000
4 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2 CCACTCAACG-CCTGTCTAGA 51827653 50714725 1112928 0 0.0140 0.9785 0.0215 0.0000
4 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2 AGCCACTCGT-CCAAGAGGAT 27594230 23373958 4220272 0 0.0074 0.8471 0.1529 0.0000
4 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2 GCGAAGAATT-TCACGGATGA 34856477 34160245 696232 0 0.0094 0.9800 0.0200 0.0000
4 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2 TGTCGGTGCT-AGTTCTTCCG 20141 19790 351 0 0.0000 0.9826 0.0174 0.0000
4 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2 TCTACAGCTA-AATGGAAGAC 36021903 35303339 718564 0 0.0097 0.9801 0.0199 0.0000
4 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2 CAACCATGAT-ATAAGGTGAC 17260575 16981460 279115 0 0.0047 0.9838 0.0162 0.0000
4 1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2 CGCACATTAC-TGGAACGTAG 30138015 29551488 586527 0 0.0081 0.9805 0.0195 0.0000
4 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2 ATCTAACCTG-CCTGTGGTTC 24010937 23400693 610244 0 0.0065 0.9746 0.0254 0.0000
4 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2 GCGACAATAT-ATTCGTACGG 35609139 34944023 665116 0 0.0096 0.9813 0.0187 0.0000
4 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2 TTGCCGTATC-ACATTAGCGG 96087074 94257230 1829844 0 0.0259 0.9810 0.0190 0.0000
4 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2 GATCCACTTA-GTGTTCTGTT 34877869 34242035 635834 0 0.0094 0.9818 0.0182 0.0000
4 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2 TCCGAGATGC-TGTCACCTTA 26743988 25361718 1382270 0 0.0072 0.9483 0.0517 0.0000
4 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2 ATAGAGTTCG-GCATAACGGC 29325126 28791602 533524 0 0.0079 0.9818 0.0182 0.0000
4 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2 GCATTCCTTC-GAGCCTGCTT 29694497 23648592 6045905 0 0.0080 0.7964 0.2036 0.0000
4 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2 AATCGTGCGG-GTTCAGTAGA 70934248 69689375 1244873 0 0.0191 0.9825 0.0175 0.0000
4 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2 TACCGGAGCA-CTTAGCAGGC 48740116 47887998 852118 0 0.0131 0.9825 0.0175 0.0000
4 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2 AGCACCAGTC-CTCGTGTAGC 25552772 24815119 737653 0 0.0069 0.9711 0.0289 0.0000
4 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2 TACCTAGACT-GCATTCGAAT 35526444 34653845 872599 0 0.0096 0.9754 0.0246 0.0000
4 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2 CAGACTGCAG-ACCGGCCTTA 40913620 38737147 2176473 0 0.0110 0.9468 0.0532 0.0000
4 1173_FM_T1_RNA_SLD_01_A23T55JLT4_2 GTTAGTGCCT-CTGCATAGCA 45519540 44677783 841757 0 0.0123 0.9815 0.0185 0.0000
4 1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2 CGCAATAAGA-CCTACAGCGT 18769297 18353402 415895 0 0.0051 0.9778 0.0222 0.0000
4 1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2 TCGGTCTGTT-TGGTTGGTAC 35278572 34766944 511628 0 0.0095 0.9855 0.0145 0.0000
4 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2 CTAGACGAGC-GAGGATGGAT 32456362 31910346 546016 0 0.0088 0.9832 0.0168 0.0000
4 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2 GTAATACTCG-CTCACGAATC 31344658 29342687 2001971 0 0.0085 0.9361 0.0639 0.0000
4 1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2 GATTCTTAGC-TGCTAGCGGT 22080776 21739774 341002 0 0.0060 0.9846 0.0154 0.0000
4 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2 TGTGATCGCG-AGACGAGTCT 10145618 9872596 273022 0 0.0027 0.9731 0.0269 0.0000
4 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2 ATCGAGAGAC-TGGAAGCAGA 21643002 21214023 428979 0 0.0058 0.9802 0.0198 0.0000
4 1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2 CTGAACGTAT-GCCAATACAT 27124741 26697605 427136 0 0.0073 0.9843 0.0157 0.0000
4 1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2 CACTAGACTT-TGTGGATTAG 41799321 41114965 684356 0 0.0113 0.9836 0.0164 0.0000
4 1173_T46_T1_RNA_SLD_01_A23T55JLT4_2 CGTCGCCTAT-TATCTTCTCG 34371596 31643973 2727623 0 0.0093 0.9206 0.0794 0.0000
4 Undetermined 273892746 273892746 0 0 0.0739 1.0000 0.0000 0.0000
98 rows