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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L002/Reports/Demultiplex_Stats.csv
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11.0 KB
Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 07, 2026 11:47 PM

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
2 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1 TAGCGAGGCT-TTGCTCACGG 76279115 75135024 1144091 0 0.0204 0.9850 0.0150 0.0000
2 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1 CCAACTGTAT-GCGCTAGAGA 1805189 1766180 39009 0 0.0005 0.9784 0.0216 0.0000
2 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1 GAGTAGTGAC-GCGATGCCAA 61398586 60315838 1082748 0 0.0164 0.9824 0.0176 0.0000
2 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1 CCAGTATTCT-ACGAAGCGAT 13437515 13216267 221248 0 0.0036 0.9835 0.0165 0.0000
2 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1 ATCATACCGC-ATGTCGTACT 13037286 12818012 219274 0 0.0035 0.9832 0.0168 0.0000
2 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1 ATTCGCACTA-TCTGTATGGT 81330002 80294695 1035307 0 0.0217 0.9873 0.0127 0.0000
2 1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1 CTCTTCAGCA-TTGTCTCTAC 18657595 18289326 368269 0 0.0050 0.9803 0.0197 0.0000
2 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1 CTGTATGCCA-TTCCGGCTGT 90838985 89570819 1268166 0 0.0243 0.9860 0.0140 0.0000
2 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1 TCTGACTATG-TAACCAGATC 43636756 43048462 588294 0 0.0117 0.9865 0.0135 0.0000
2 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1 TGTGACGTAT-GCAGCGTTAG 3500898 3445721 55177 0 0.0009 0.9842 0.0158 0.0000
2 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1 AGAAGATTGG-AGAAGGTACT 49350891 48460615 890276 0 0.0132 0.9820 0.0180 0.0000
2 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1 ATCCAGCATG-AGAGCTCTAC 57676492 56398247 1278245 0 0.0154 0.9778 0.0222 0.0000
2 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1 GCGCCATATA-GAACCTCCTA 35515135 34856948 658187 0 0.0095 0.9815 0.0185 0.0000
2 1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1 CACTCGCATA-GAACGCGACA 37475797 36866695 609102 0 0.0100 0.9837 0.0163 0.0000
2 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1 AAGGTCAATG-GCATTATAGG 34381199 33845532 535667 0 0.0092 0.9844 0.0156 0.0000
2 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1 GTGACGCACA-CGTTGTTGCG 50007352 49096808 910544 0 0.0134 0.9818 0.0182 0.0000
2 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1 TGTCAGGCTT-GATTCCTTAC 75861947 74717052 1144895 0 0.0203 0.9849 0.0151 0.0000
2 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1 CACGTGATGG-TACAACGTGT 1954763 1920496 34267 0 0.0005 0.9825 0.0175 0.0000
2 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1 CCATCACGTG-TCTCCTGGTT 39632667 38610927 1021740 0 0.0106 0.9742 0.0258 0.0000
2 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1 ACCAGGAATT-AGCATGGCAT 83129586 81451918 1677668 0 0.0222 0.9798 0.0202 0.0000
2 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1 TAAGGCTCAC-GACGTTACTT 19829895 19495013 334882 0 0.0053 0.9831 0.0169 0.0000
2 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1 TGGCACTGAT-GCCATAGAAT 93528377 92035935 1492442 0 0.0250 0.9840 0.0160 0.0000
2 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1 CATATGGTGC-ACAGATCTCA 33793260 33228425 564835 0 0.0090 0.9833 0.0167 0.0000
2 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1 GCACTACCAG-GAAGACTTAG 46725805 45551400 1174405 0 0.0125 0.9749 0.0251 0.0000
2 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1 GCATAAGATC-GAGAACTGGA 48205479 47264637 940842 0 0.0129 0.9805 0.0195 0.0000
2 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1 AAGGTGTACT-AGCGCTACAG 1450354 1420783 29571 0 0.0004 0.9796 0.0204 0.0000
2 1173_FM_T1_RNA_SLD_01_A23T55JLT4_1 CTTCTAACCG-TGATCAGTCT 61919724 60888280 1031444 0 0.0165 0.9833 0.0167 0.0000
2 1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1 TCGACCAGCA-GTTCGAACTC 33377922 32811291 566631 0 0.0089 0.9830 0.0170 0.0000
2 1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1 GTGACACGTC-CTTACACTGA 51993542 51256591 736951 0 0.0139 0.9858 0.0142 0.0000
2 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1 AATGGACGCG-AAGTGCACCG 34245394 33432800 812594 0 0.0091 0.9763 0.0237 0.0000
2 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1 TCTCCGTACT-AGTTGTGATC 56663052 55640688 1022364 0 0.0151 0.9820 0.0180 0.0000
2 1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1 TGGAAGCACA-TCCAACACCG 30224469 29662377 562092 0 0.0081 0.9814 0.0186 0.0000
2 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1 GATAGACAAC-GTGTTCACGT 5895621 5787558 108063 0 0.0016 0.9817 0.0183 0.0000
2 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1 AGCGTCTCAT-CCTAGGCGAT 4242955 3937835 305120 0 0.0011 0.9281 0.0719 0.0000
2 1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1 CTCTATACTG-CGTTCAACCG 40543945 39444359 1099586 0 0.0108 0.9729 0.0271 0.0000
2 1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1 ATAGCCGGTT-TCTTATCCGG 68697481 66940450 1757031 0 0.0184 0.9744 0.0256 0.0000
2 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1 GTTCTCATCA-CCTCCATTCT 39663011 39050221 612790 0 0.0106 0.9846 0.0154 0.0000
2 1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1 CAATGCGTGT-ATGTTCGCGC 58667021 57539156 1127865 0 0.0157 0.9808 0.0192 0.0000
2 1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1 TGAGTGTACA-ATTCGCCGGT 45562008 44533524 1028484 0 0.0122 0.9774 0.0226 0.0000
2 1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1 TGCTTCCAAG-CAGATGTTAC 1303723 1280349 23374 0 0.0003 0.9821 0.0179 0.0000
2 1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1 CCTACTCTGC-TGCAATTGGC 13877899 13672999 204900 0 0.0037 0.9852 0.0148 0.0000
2 1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1 TCGCTGAGAG-AATGCTCTAG 557969 544534 13435 0 0.0001 0.9759 0.0241 0.0000
2 1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1 CGCTAATTGC-CCATCGCATT 4453020 4377018 76002 0 0.0012 0.9829 0.0171 0.0000
2 1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1 TCAGCTGTCA-ACAGCTCCTG 50349783 49389482 960301 0 0.0135 0.9809 0.0191 0.0000
2 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1 AGACGACAGA-GAGCTGGAAT 30892296 30172938 719358 0 0.0083 0.9767 0.0233 0.0000
2 1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1 TAGGTCCAGA-TGCTCATCCG 19122594 17569881 1552713 0 0.0051 0.9188 0.0812 0.0000
2 1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1 TAACCTGAAC-TCAATTGACG 3539602 3480411 59191 0 0.0009 0.9833 0.0167 0.0000
2 1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1 GATAGGTGAA-AGACGCAAGA 29644321 28833808 810513 0 0.0079 0.9727 0.0273 0.0000
2 1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1 CTTGTTACTG-AATTCGGTGG 25483303 25090434 392869 0 0.0068 0.9846 0.0154 0.0000
2 1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1 TCACCGTGGT-TCGCTCTGCT 30129541 29604729 524812 0 0.0080 0.9826 0.0174 0.0000
2 1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1 CAACTACCGC-ATGCTGCAGG 45049578 44274683 774895 0 0.0120 0.9828 0.0172 0.0000
2 1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1 ACTCGTCCAG-TGGTCCTCGT 56026685 54994010 1032675 0 0.0150 0.9816 0.0184 0.0000
2 1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1 TCCGGAGAAC-ATTCCTCTGG 38135425 37464353 671072 0 0.0102 0.9824 0.0176 0.0000
2 1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1 TTGTGAGAAG-TTCACTGGCT 35792912 35236930 555982 0 0.0096 0.9845 0.0155 0.0000
2 1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1 CCGAAGGTTC-TCTATCTGAC 1353660 1335401 18259 0 0.0004 0.9865 0.0135 0.0000
2 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1 ATACACACCT-AGTGTGATAG 44126959 43353564 773395 0 0.0118 0.9825 0.0175 0.0000
2 FFPE_V4_0002_RNA_0001_A23T55JLT4_1 AGCCTCTGCT-TTCGCCTTAG 44233735 42452653 1781082 0 0.0118 0.9597 0.0403 0.0000
2 NTC_0001_0001_A23T55JLT4_1 CGGATCATTA-CCGTAACCTT 2195 2147 48 0 0.0000 0.9781 0.0219 0.0000
2 FFPE_HD789_01_RNA_13_A23T55JLT4_1 CTCTCTCTAG-ACTTGATTGG 75136859 73634467 1502392 0 0.0201 0.9800 0.0200 0.0000
2 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2 AAGGCTCCAT-TGAAGATGGA 26397955 25987444 410511 0 0.0071 0.9844 0.0156 0.0000
2 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2 GATAGATCAG-CGTACGCCAT 18842634 18475066 367568 0 0.0050 0.9805 0.0195 0.0000
2 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2 GCAGAAGTCT-CTGCGTCGAA 51837084 50905802 931282 0 0.0138 0.9820 0.0180 0.0000
2 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2 TATACGATGC-CTCCTAATCT 29561504 28822229 739275 0 0.0079 0.9750 0.0250 0.0000
2 1173_C31_T1_RNA_SLD_01_A23T55JLT4_2 AACGCTCTGA-GAGTAACGTG 19518760 19188549 330211 0 0.0052 0.9831 0.0169 0.0000
2 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2 GATTGGCGAT-CTGTCTCATT 76465239 74915989 1549250 0 0.0204 0.9797 0.0203 0.0000
2 1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2 CAAGACGGAC-GTACTCCGTC 37808015 37223839 584176 0 0.0101 0.9845 0.0155 0.0000
2 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2 CCACTCAACG-CCTGTCTAGA 52341446 51277153 1064293 0 0.0140 0.9797 0.0203 0.0000
2 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2 AGCCACTCGT-CCAAGAGGAT 28218935 24158179 4060756 0 0.0075 0.8561 0.1439 0.0000
2 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2 GCGAAGAATT-TCACGGATGA 35823745 35155021 668724 0 0.0096 0.9813 0.0187 0.0000
2 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2 TGTCGGTGCT-AGTTCTTCCG 20811 20472 339 0 0.0000 0.9837 0.0163 0.0000
2 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2 TCTACAGCTA-AATGGAAGAC 36718315 36033545 684770 0 0.0098 0.9814 0.0186 0.0000
2 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2 CAACCATGAT-ATAAGGTGAC 17650098 17380772 269326 0 0.0047 0.9847 0.0153 0.0000
2 1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2 CGCACATTAC-TGGAACGTAG 31076558 30524821 551737 0 0.0083 0.9822 0.0178 0.0000
2 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2 ATCTAACCTG-CCTGTGGTTC 24434485 23842960 591525 0 0.0065 0.9758 0.0242 0.0000
2 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2 GCGACAATAT-ATTCGTACGG 36272828 35638935 633893 0 0.0097 0.9825 0.0175 0.0000
2 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2 TTGCCGTATC-ACATTAGCGG 97888118 96123819 1764299 0 0.0262 0.9820 0.0180 0.0000
2 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2 GATCCACTTA-GTGTTCTGTT 35908541 35284254 624287 0 0.0096 0.9826 0.0174 0.0000
2 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2 TCCGAGATGC-TGTCACCTTA 27584655 26239528 1345127 0 0.0074 0.9512 0.0488 0.0000
2 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2 ATAGAGTTCG-GCATAACGGC 30576877 30050428 526449 0 0.0082 0.9828 0.0172 0.0000
2 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2 GCATTCCTTC-GAGCCTGCTT 30627195 24735584 5891611 0 0.0082 0.8076 0.1924 0.0000
2 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2 AATCGTGCGG-GTTCAGTAGA 71425201 70254437 1170764 0 0.0191 0.9836 0.0164 0.0000
2 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2 TACCGGAGCA-CTTAGCAGGC 50448607 49622243 826364 0 0.0135 0.9836 0.0164 0.0000
2 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2 AGCACCAGTC-CTCGTGTAGC 26119851 25410659 709192 0 0.0070 0.9728 0.0272 0.0000
2 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2 TACCTAGACT-GCATTCGAAT 36976208 36114776 861432 0 0.0099 0.9767 0.0233 0.0000
2 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2 CAGACTGCAG-ACCGGCCTTA 42203197 39936533 2266664 0 0.0113 0.9463 0.0537 0.0000
2 1173_FM_T1_RNA_SLD_01_A23T55JLT4_2 GTTAGTGCCT-CTGCATAGCA 46800357 45980603 819754 0 0.0125 0.9825 0.0175 0.0000
2 1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2 CGCAATAAGA-CCTACAGCGT 19195814 18797172 398642 0 0.0051 0.9792 0.0208 0.0000
2 1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2 TCGGTCTGTT-TGGTTGGTAC 36271339 35781215 490124 0 0.0097 0.9865 0.0135 0.0000
2 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2 CTAGACGAGC-GAGGATGGAT 33100135 32579920 520215 0 0.0088 0.9843 0.0157 0.0000
2 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2 GTAATACTCG-CTCACGAATC 31542538 29758083 1784455 0 0.0084 0.9434 0.0566 0.0000
2 1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2 GATTCTTAGC-TGCTAGCGGT 22445293 22120818 324475 0 0.0060 0.9855 0.0145 0.0000
2 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2 TGTGATCGCG-AGACGAGTCT 10231363 9967342 264021 0 0.0027 0.9742 0.0258 0.0000
2 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2 ATCGAGAGAC-TGGAAGCAGA 22070599 21659809 410790 0 0.0059 0.9814 0.0186 0.0000
2 1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2 CTGAACGTAT-GCCAATACAT 28011608 27600281 411327 0 0.0075 0.9853 0.0147 0.0000
2 1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2 CACTAGACTT-TGTGGATTAG 42617124 41963200 653924 0 0.0114 0.9847 0.0153 0.0000
2 1173_T46_T1_RNA_SLD_01_A23T55JLT4_2 CGTCGCCTAT-TATCTTCTCG 34956224 32326947 2629277 0 0.0093 0.9248 0.0752 0.0000
2 Undetermined 249916067 249916067 0 0 0.0668 1.0000 0.0000 0.0000
98 rows