Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
2,1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1,TAGCGAGGCT-TTGCTCACGG,76279115,75135024,1144091,0,0.0204,0.9850,0.0150,0.0000
2,1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1,CCAACTGTAT-GCGCTAGAGA,1805189,1766180,39009,0,0.0005,0.9784,0.0216,0.0000
2,1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1,GAGTAGTGAC-GCGATGCCAA,61398586,60315838,1082748,0,0.0164,0.9824,0.0176,0.0000
2,1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1,CCAGTATTCT-ACGAAGCGAT,13437515,13216267,221248,0,0.0036,0.9835,0.0165,0.0000
2,1173_C31_T1_RNA_SLD_01_A23T55JLT4_1,ATCATACCGC-ATGTCGTACT,13037286,12818012,219274,0,0.0035,0.9832,0.0168,0.0000
2,1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1,ATTCGCACTA-TCTGTATGGT,81330002,80294695,1035307,0,0.0217,0.9873,0.0127,0.0000
2,1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1,CTCTTCAGCA-TTGTCTCTAC,18657595,18289326,368269,0,0.0050,0.9803,0.0197,0.0000
2,1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1,CTGTATGCCA-TTCCGGCTGT,90838985,89570819,1268166,0,0.0243,0.9860,0.0140,0.0000
2,1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1,TCTGACTATG-TAACCAGATC,43636756,43048462,588294,0,0.0117,0.9865,0.0135,0.0000
2,1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1,TGTGACGTAT-GCAGCGTTAG,3500898,3445721,55177,0,0.0009,0.9842,0.0158,0.0000
2,1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1,AGAAGATTGG-AGAAGGTACT,49350891,48460615,890276,0,0.0132,0.9820,0.0180,0.0000
2,1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1,ATCCAGCATG-AGAGCTCTAC,57676492,56398247,1278245,0,0.0154,0.9778,0.0222,0.0000
2,1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1,GCGCCATATA-GAACCTCCTA,35515135,34856948,658187,0,0.0095,0.9815,0.0185,0.0000
2,1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1,CACTCGCATA-GAACGCGACA,37475797,36866695,609102,0,0.0100,0.9837,0.0163,0.0000
2,1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1,AAGGTCAATG-GCATTATAGG,34381199,33845532,535667,0,0.0092,0.9844,0.0156,0.0000
2,1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1,GTGACGCACA-CGTTGTTGCG,50007352,49096808,910544,0,0.0134,0.9818,0.0182,0.0000
2,1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1,TGTCAGGCTT-GATTCCTTAC,75861947,74717052,1144895,0,0.0203,0.9849,0.0151,0.0000
2,1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1,CACGTGATGG-TACAACGTGT,1954763,1920496,34267,0,0.0005,0.9825,0.0175,0.0000
2,1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1,CCATCACGTG-TCTCCTGGTT,39632667,38610927,1021740,0,0.0106,0.9742,0.0258,0.0000
2,1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1,ACCAGGAATT-AGCATGGCAT,83129586,81451918,1677668,0,0.0222,0.9798,0.0202,0.0000
2,1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1,TAAGGCTCAC-GACGTTACTT,19829895,19495013,334882,0,0.0053,0.9831,0.0169,0.0000
2,1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1,TGGCACTGAT-GCCATAGAAT,93528377,92035935,1492442,0,0.0250,0.9840,0.0160,0.0000
2,1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1,CATATGGTGC-ACAGATCTCA,33793260,33228425,564835,0,0.0090,0.9833,0.0167,0.0000
2,1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1,GCACTACCAG-GAAGACTTAG,46725805,45551400,1174405,0,0.0125,0.9749,0.0251,0.0000
2,1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1,GCATAAGATC-GAGAACTGGA,48205479,47264637,940842,0,0.0129,0.9805,0.0195,0.0000
2,1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1,AAGGTGTACT-AGCGCTACAG,1450354,1420783,29571,0,0.0004,0.9796,0.0204,0.0000
2,1173_FM_T1_RNA_SLD_01_A23T55JLT4_1,CTTCTAACCG-TGATCAGTCT,61919724,60888280,1031444,0,0.0165,0.9833,0.0167,0.0000
2,1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1,TCGACCAGCA-GTTCGAACTC,33377922,32811291,566631,0,0.0089,0.9830,0.0170,0.0000
2,1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1,GTGACACGTC-CTTACACTGA,51993542,51256591,736951,0,0.0139,0.9858,0.0142,0.0000
2,1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1,AATGGACGCG-AAGTGCACCG,34245394,33432800,812594,0,0.0091,0.9763,0.0237,0.0000
2,1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1,TCTCCGTACT-AGTTGTGATC,56663052,55640688,1022364,0,0.0151,0.9820,0.0180,0.0000
2,1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1,TGGAAGCACA-TCCAACACCG,30224469,29662377,562092,0,0.0081,0.9814,0.0186,0.0000
2,1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1,GATAGACAAC-GTGTTCACGT,5895621,5787558,108063,0,0.0016,0.9817,0.0183,0.0000
2,1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1,AGCGTCTCAT-CCTAGGCGAT,4242955,3937835,305120,0,0.0011,0.9281,0.0719,0.0000
2,1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1,CTCTATACTG-CGTTCAACCG,40543945,39444359,1099586,0,0.0108,0.9729,0.0271,0.0000
2,1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1,ATAGCCGGTT-TCTTATCCGG,68697481,66940450,1757031,0,0.0184,0.9744,0.0256,0.0000
2,1173_T46_T1_RNA_SLD_01_A23T55JLT4_1,GTTCTCATCA-CCTCCATTCT,39663011,39050221,612790,0,0.0106,0.9846,0.0154,0.0000
2,1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1,CAATGCGTGT-ATGTTCGCGC,58667021,57539156,1127865,0,0.0157,0.9808,0.0192,0.0000
2,1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1,TGAGTGTACA-ATTCGCCGGT,45562008,44533524,1028484,0,0.0122,0.9774,0.0226,0.0000
2,1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1,TGCTTCCAAG-CAGATGTTAC,1303723,1280349,23374,0,0.0003,0.9821,0.0179,0.0000
2,1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1,CCTACTCTGC-TGCAATTGGC,13877899,13672999,204900,0,0.0037,0.9852,0.0148,0.0000
2,1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1,TCGCTGAGAG-AATGCTCTAG,557969,544534,13435,0,0.0001,0.9759,0.0241,0.0000
2,1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1,CGCTAATTGC-CCATCGCATT,4453020,4377018,76002,0,0.0012,0.9829,0.0171,0.0000
2,1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1,TCAGCTGTCA-ACAGCTCCTG,50349783,49389482,960301,0,0.0135,0.9809,0.0191,0.0000
2,1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1,AGACGACAGA-GAGCTGGAAT,30892296,30172938,719358,0,0.0083,0.9767,0.0233,0.0000
2,1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1,TAGGTCCAGA-TGCTCATCCG,19122594,17569881,1552713,0,0.0051,0.9188,0.0812,0.0000
2,1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1,TAACCTGAAC-TCAATTGACG,3539602,3480411,59191,0,0.0009,0.9833,0.0167,0.0000
2,1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1,GATAGGTGAA-AGACGCAAGA,29644321,28833808,810513,0,0.0079,0.9727,0.0273,0.0000
2,1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1,CTTGTTACTG-AATTCGGTGG,25483303,25090434,392869,0,0.0068,0.9846,0.0154,0.0000
2,1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1,TCACCGTGGT-TCGCTCTGCT,30129541,29604729,524812,0,0.0080,0.9826,0.0174,0.0000
2,1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1,CAACTACCGC-ATGCTGCAGG,45049578,44274683,774895,0,0.0120,0.9828,0.0172,0.0000
2,1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1,ACTCGTCCAG-TGGTCCTCGT,56026685,54994010,1032675,0,0.0150,0.9816,0.0184,0.0000
2,1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1,TCCGGAGAAC-ATTCCTCTGG,38135425,37464353,671072,0,0.0102,0.9824,0.0176,0.0000
2,1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1,TTGTGAGAAG-TTCACTGGCT,35792912,35236930,555982,0,0.0096,0.9845,0.0155,0.0000
2,1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1,CCGAAGGTTC-TCTATCTGAC,1353660,1335401,18259,0,0.0004,0.9865,0.0135,0.0000
2,1173_9C_T1_RNA_SLD_01_A23T55JLT4_1,ATACACACCT-AGTGTGATAG,44126959,43353564,773395,0,0.0118,0.9825,0.0175,0.0000
2,FFPE_V4_0002_RNA_0001_A23T55JLT4_1,AGCCTCTGCT-TTCGCCTTAG,44233735,42452653,1781082,0,0.0118,0.9597,0.0403,0.0000
2,NTC_0001_0001_A23T55JLT4_1,CGGATCATTA-CCGTAACCTT,2195,2147,48,0,0.0000,0.9781,0.0219,0.0000
2,FFPE_HD789_01_RNA_13_A23T55JLT4_1,CTCTCTCTAG-ACTTGATTGG,75136859,73634467,1502392,0,0.0201,0.9800,0.0200,0.0000
2,1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2,AAGGCTCCAT-TGAAGATGGA,26397955,25987444,410511,0,0.0071,0.9844,0.0156,0.0000
2,1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2,GATAGATCAG-CGTACGCCAT,18842634,18475066,367568,0,0.0050,0.9805,0.0195,0.0000
2,1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2,GCAGAAGTCT-CTGCGTCGAA,51837084,50905802,931282,0,0.0138,0.9820,0.0180,0.0000
2,1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2,TATACGATGC-CTCCTAATCT,29561504,28822229,739275,0,0.0079,0.9750,0.0250,0.0000
2,1173_C31_T1_RNA_SLD_01_A23T55JLT4_2,AACGCTCTGA-GAGTAACGTG,19518760,19188549,330211,0,0.0052,0.9831,0.0169,0.0000
2,1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2,GATTGGCGAT-CTGTCTCATT,76465239,74915989,1549250,0,0.0204,0.9797,0.0203,0.0000
2,1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2,CAAGACGGAC-GTACTCCGTC,37808015,37223839,584176,0,0.0101,0.9845,0.0155,0.0000
2,1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2,CCACTCAACG-CCTGTCTAGA,52341446,51277153,1064293,0,0.0140,0.9797,0.0203,0.0000
2,1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2,AGCCACTCGT-CCAAGAGGAT,28218935,24158179,4060756,0,0.0075,0.8561,0.1439,0.0000
2,1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2,GCGAAGAATT-TCACGGATGA,35823745,35155021,668724,0,0.0096,0.9813,0.0187,0.0000
2,1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2,TGTCGGTGCT-AGTTCTTCCG,20811,20472,339,0,0.0000,0.9837,0.0163,0.0000
2,1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2,TCTACAGCTA-AATGGAAGAC,36718315,36033545,684770,0,0.0098,0.9814,0.0186,0.0000
2,1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2,CAACCATGAT-ATAAGGTGAC,17650098,17380772,269326,0,0.0047,0.9847,0.0153,0.0000
2,1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2,CGCACATTAC-TGGAACGTAG,31076558,30524821,551737,0,0.0083,0.9822,0.0178,0.0000
2,1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2,ATCTAACCTG-CCTGTGGTTC,24434485,23842960,591525,0,0.0065,0.9758,0.0242,0.0000
2,1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2,GCGACAATAT-ATTCGTACGG,36272828,35638935,633893,0,0.0097,0.9825,0.0175,0.0000
2,1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2,TTGCCGTATC-ACATTAGCGG,97888118,96123819,1764299,0,0.0262,0.9820,0.0180,0.0000
2,1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2,GATCCACTTA-GTGTTCTGTT,35908541,35284254,624287,0,0.0096,0.9826,0.0174,0.0000
2,1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2,TCCGAGATGC-TGTCACCTTA,27584655,26239528,1345127,0,0.0074,0.9512,0.0488,0.0000
2,1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2,ATAGAGTTCG-GCATAACGGC,30576877,30050428,526449,0,0.0082,0.9828,0.0172,0.0000
2,1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2,GCATTCCTTC-GAGCCTGCTT,30627195,24735584,5891611,0,0.0082,0.8076,0.1924,0.0000
2,1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2,AATCGTGCGG-GTTCAGTAGA,71425201,70254437,1170764,0,0.0191,0.9836,0.0164,0.0000
2,1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2,TACCGGAGCA-CTTAGCAGGC,50448607,49622243,826364,0,0.0135,0.9836,0.0164,0.0000
2,1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2,AGCACCAGTC-CTCGTGTAGC,26119851,25410659,709192,0,0.0070,0.9728,0.0272,0.0000
2,1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2,TACCTAGACT-GCATTCGAAT,36976208,36114776,861432,0,0.0099,0.9767,0.0233,0.0000
2,1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2,CAGACTGCAG-ACCGGCCTTA,42203197,39936533,2266664,0,0.0113,0.9463,0.0537,0.0000
2,1173_FM_T1_RNA_SLD_01_A23T55JLT4_2,GTTAGTGCCT-CTGCATAGCA,46800357,45980603,819754,0,0.0125,0.9825,0.0175,0.0000
2,1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2,CGCAATAAGA-CCTACAGCGT,19195814,18797172,398642,0,0.0051,0.9792,0.0208,0.0000
2,1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2,TCGGTCTGTT-TGGTTGGTAC,36271339,35781215,490124,0,0.0097,0.9865,0.0135,0.0000
2,1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2,CTAGACGAGC-GAGGATGGAT,33100135,32579920,520215,0,0.0088,0.9843,0.0157,0.0000
2,1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2,GTAATACTCG-CTCACGAATC,31542538,29758083,1784455,0,0.0084,0.9434,0.0566,0.0000
2,1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2,GATTCTTAGC-TGCTAGCGGT,22445293,22120818,324475,0,0.0060,0.9855,0.0145,0.0000
2,1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2,TGTGATCGCG-AGACGAGTCT,10231363,9967342,264021,0,0.0027,0.9742,0.0258,0.0000
2,1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2,ATCGAGAGAC-TGGAAGCAGA,22070599,21659809,410790,0,0.0059,0.9814,0.0186,0.0000
2,1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2,CTGAACGTAT-GCCAATACAT,28011608,27600281,411327,0,0.0075,0.9853,0.0147,0.0000
2,1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2,CACTAGACTT-TGTGGATTAG,42617124,41963200,653924,0,0.0114,0.9847,0.0153,0.0000
2,1173_T46_T1_RNA_SLD_01_A23T55JLT4_2,CGTCGCCTAT-TATCTTCTCG,34956224,32326947,2629277,0,0.0093,0.9248,0.0752,0.0000
2,Undetermined,,249916067,249916067,0,0,0.0668,1.0000,0.0000,0.0000