Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads 8,1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1,TAGCGAGGCT-TTGCTCACGG,76610333,75367601,1242732,0,0.0203,0.9838,0.0162,0.0000 8,1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1,CCAACTGTAT-GCGCTAGAGA,1813286,1772959,40327,0,0.0005,0.9778,0.0222,0.0000 8,1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1,GAGTAGTGAC-GCGATGCCAA,61720427,60563653,1156774,0,0.0163,0.9813,0.0187,0.0000 8,1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1,CCAGTATTCT-ACGAAGCGAT,13500174,13263860,236314,0,0.0036,0.9825,0.0175,0.0000 8,1173_C31_T1_RNA_SLD_01_A23T55JLT4_1,ATCATACCGC-ATGTCGTACT,13112239,12874234,238005,0,0.0035,0.9818,0.0182,0.0000 8,1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1,ATTCGCACTA-TCTGTATGGT,81879260,80744660,1134600,0,0.0217,0.9861,0.0139,0.0000 8,1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1,CTCTTCAGCA-TTGTCTCTAC,18808986,18432163,376823,0,0.0050,0.9800,0.0200,0.0000 8,1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1,CTGTATGCCA-TTCCGGCTGT,91726486,90348125,1378361,0,0.0243,0.9850,0.0150,0.0000 8,1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1,TCTGACTATG-TAACCAGATC,43897366,43256881,640485,0,0.0116,0.9854,0.0146,0.0000 8,1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1,TGTGACGTAT-GCAGCGTTAG,3523413,3463745,59668,0,0.0009,0.9831,0.0169,0.0000 8,1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1,AGAAGATTGG-AGAAGGTACT,49991283,49037831,953452,0,0.0132,0.9809,0.0191,0.0000 8,1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1,ATCCAGCATG-AGAGCTCTAC,57868970,56499480,1369490,0,0.0153,0.9763,0.0237,0.0000 8,1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1,GCGCCATATA-GAACCTCCTA,35635994,34936339,699655,0,0.0094,0.9804,0.0196,0.0000 8,1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1,CACTCGCATA-GAACGCGACA,37562290,36914360,647930,0,0.0100,0.9828,0.0172,0.0000 8,1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1,AAGGTCAATG-GCATTATAGG,34676707,34094578,582129,0,0.0092,0.9832,0.0168,0.0000 8,1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1,GTGACGCACA-CGTTGTTGCG,50314815,49330933,983882,0,0.0133,0.9804,0.0196,0.0000 8,1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1,TGTCAGGCTT-GATTCCTTAC,76546222,75285899,1260323,0,0.0203,0.9835,0.0165,0.0000 8,1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1,CACGTGATGG-TACAACGTGT,1974724,1938240,36484,0,0.0005,0.9815,0.0185,0.0000 8,1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1,CCATCACGTG-TCTCCTGGTT,39918908,38850186,1068722,0,0.0106,0.9732,0.0268,0.0000 8,1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1,ACCAGGAATT-AGCATGGCAT,83533277,81755190,1778087,0,0.0221,0.9787,0.0213,0.0000 8,1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1,TAAGGCTCAC-GACGTTACTT,19909918,19551114,358804,0,0.0053,0.9820,0.0180,0.0000 8,1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1,TGGCACTGAT-GCCATAGAAT,94142790,92529720,1613070,0,0.0249,0.9829,0.0171,0.0000 8,1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1,CATATGGTGC-ACAGATCTCA,34080350,33469452,610898,0,0.0090,0.9821,0.0179,0.0000 8,1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1,GCACTACCAG-GAAGACTTAG,47236460,46014338,1222122,0,0.0125,0.9741,0.0259,0.0000 8,1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1,GCATAAGATC-GAGAACTGGA,48435382,47447298,988084,0,0.0128,0.9796,0.0204,0.0000 8,1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1,AAGGTGTACT-AGCGCTACAG,1459482,1428347,31135,0,0.0004,0.9787,0.0213,0.0000 8,1173_FM_T1_RNA_SLD_01_A23T55JLT4_1,CTTCTAACCG-TGATCAGTCT,62486759,61376254,1110505,0,0.0166,0.9822,0.0178,0.0000 8,1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1,TCGACCAGCA-GTTCGAACTC,33554081,32946407,607674,0,0.0089,0.9819,0.0181,0.0000 8,1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1,GTGACACGTC-CTTACACTGA,52229069,51433902,795167,0,0.0138,0.9848,0.0152,0.0000 8,1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1,AATGGACGCG-AAGTGCACCG,34551974,33690171,861803,0,0.0092,0.9751,0.0249,0.0000 8,1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1,TCTCCGTACT-AGTTGTGATC,56998071,55915276,1082795,0,0.0151,0.9810,0.0190,0.0000 8,1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1,TGGAAGCACA-TCCAACACCG,30318395,29719085,599310,0,0.0080,0.9802,0.0198,0.0000 8,1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1,GATAGACAAC-GTGTTCACGT,5897398,5783776,113622,0,0.0016,0.9807,0.0193,0.0000 8,1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1,AGCGTCTCAT-CCTAGGCGAT,4270634,3967470,303164,0,0.0011,0.9290,0.0710,0.0000 8,1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1,CTCTATACTG-CGTTCAACCG,40778095,39619227,1158868,0,0.0108,0.9716,0.0284,0.0000 8,1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1,ATAGCCGGTT-TCTTATCCGG,69095619,67287228,1808391,0,0.0183,0.9738,0.0262,0.0000 8,1173_T46_T1_RNA_SLD_01_A23T55JLT4_1,GTTCTCATCA-CCTCCATTCT,39920456,39265373,655083,0,0.0106,0.9836,0.0164,0.0000 8,1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1,CAATGCGTGT-ATGTTCGCGC,59216920,58014136,1202784,0,0.0157,0.9797,0.0203,0.0000 8,1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1,TGAGTGTACA-ATTCGCCGGT,45813648,44688689,1124959,0,0.0121,0.9754,0.0246,0.0000 8,1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1,TGCTTCCAAG-CAGATGTTAC,1316213,1291678,24535,0,0.0003,0.9814,0.0186,0.0000 8,1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1,CCTACTCTGC-TGCAATTGGC,13932080,13710042,222038,0,0.0037,0.9841,0.0159,0.0000 8,1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1,TCGCTGAGAG-AATGCTCTAG,560964,547070,13894,0,0.0001,0.9752,0.0248,0.0000 8,1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1,CGCTAATTGC-CCATCGCATT,4509459,4425219,84240,0,0.0012,0.9813,0.0187,0.0000 8,1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1,TCAGCTGTCA-ACAGCTCCTG,50604261,49566231,1038030,0,0.0134,0.9795,0.0205,0.0000 8,1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1,AGACGACAGA-GAGCTGGAAT,31135669,30377849,757820,0,0.0082,0.9757,0.0243,0.0000 8,1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1,TAGGTCCAGA-TGCTCATCCG,19234876,17495867,1739009,0,0.0051,0.9096,0.0904,0.0000 8,1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1,TAACCTGAAC-TCAATTGACG,3543533,3480412,63121,0,0.0009,0.9822,0.0178,0.0000 8,1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1,GATAGGTGAA-AGACGCAAGA,29851887,28999274,852613,0,0.0079,0.9714,0.0286,0.0000 8,1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1,CTTGTTACTG-AATTCGGTGG,25633313,25206659,426654,0,0.0068,0.9834,0.0166,0.0000 8,1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1,TCACCGTGGT-TCGCTCTGCT,30268808,29710002,558806,0,0.0080,0.9815,0.0185,0.0000 8,1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1,CAACTACCGC-ATGCTGCAGG,45335047,44495622,839425,0,0.0120,0.9815,0.0185,0.0000 8,1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1,ACTCGTCCAG-TGGTCCTCGT,56609936,55504089,1105847,0,0.0150,0.9805,0.0195,0.0000 8,1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1,TCCGGAGAAC-ATTCCTCTGG,38391425,37671680,719745,0,0.0102,0.9813,0.0187,0.0000 8,1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1,TTGTGAGAAG-TTCACTGGCT,36158263,35558172,600091,0,0.0096,0.9834,0.0166,0.0000 8,1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1,CCGAAGGTTC-TCTATCTGAC,1359032,1338987,20045,0,0.0004,0.9853,0.0147,0.0000 8,1173_9C_T1_RNA_SLD_01_A23T55JLT4_1,ATACACACCT-AGTGTGATAG,44320351,43493875,826476,0,0.0117,0.9814,0.0186,0.0000 8,FFPE_V4_0002_RNA_0001_A23T55JLT4_1,AGCCTCTGCT-TTCGCCTTAG,44864148,43066486,1797662,0,0.0119,0.9599,0.0401,0.0000 8,NTC_0001_0001_A23T55JLT4_1,CGGATCATTA-CCGTAACCTT,2193,2145,48,0,0.0000,0.9781,0.0219,0.0000 8,FFPE_HD789_01_RNA_13_A23T55JLT4_1,CTCTCTCTAG-ACTTGATTGG,76672001,75068337,1603664,0,0.0203,0.9791,0.0209,0.0000 8,1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2,AAGGCTCCAT-TGAAGATGGA,26597375,26157078,440297,0,0.0070,0.9834,0.0166,0.0000 8,1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2,GATAGATCAG-CGTACGCCAT,18978311,18587690,390621,0,0.0050,0.9794,0.0206,0.0000 8,1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2,GCAGAAGTCT-CTGCGTCGAA,52386027,51385338,1000689,0,0.0139,0.9809,0.0191,0.0000 8,1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2,TATACGATGC-CTCCTAATCT,29728863,29003205,725658,0,0.0079,0.9756,0.0244,0.0000 8,1173_C31_T1_RNA_SLD_01_A23T55JLT4_2,AACGCTCTGA-GAGTAACGTG,19655480,19298879,356601,0,0.0052,0.9819,0.0181,0.0000 8,1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2,GATTGGCGAT-CTGTCTCATT,77338828,75715012,1623816,0,0.0205,0.9790,0.0210,0.0000 8,1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2,CAAGACGGAC-GTACTCCGTC,38118255,37483062,635193,0,0.0101,0.9833,0.0167,0.0000 8,1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2,CCACTCAACG-CCTGTCTAGA,53040666,51904346,1136320,0,0.0141,0.9786,0.0214,0.0000 8,1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2,AGCCACTCGT-CCAAGAGGAT,28382117,24113908,4268209,0,0.0075,0.8496,0.1504,0.0000 8,1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2,GCGAAGAATT-TCACGGATGA,36042395,35333441,708954,0,0.0095,0.9803,0.0197,0.0000 8,1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2,TGTCGGTGCT-AGTTCTTCCG,20812,20422,390,0,0.0000,0.9813,0.0187,0.0000 8,1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2,TCTACAGCTA-AATGGAAGAC,36912808,36193047,719761,0,0.0098,0.9805,0.0195,0.0000 8,1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2,CAACCATGAT-ATAAGGTGAC,17725509,17436086,289423,0,0.0047,0.9837,0.0163,0.0000 8,1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2,CGCACATTAC-TGGAACGTAG,31289390,30708160,581230,0,0.0083,0.9814,0.0186,0.0000 8,1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2,ATCTAACCTG-CCTGTGGTTC,24654044,24019711,634333,0,0.0065,0.9743,0.0257,0.0000 8,1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2,GCGACAATAT-ATTCGTACGG,36435659,35761920,673739,0,0.0097,0.9815,0.0185,0.0000 8,1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2,TTGCCGTATC-ACATTAGCGG,98588324,96689082,1899242,0,0.0261,0.9807,0.0193,0.0000 8,1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2,GATCCACTTA-GTGTTCTGTT,36100286,35429378,670908,0,0.0096,0.9814,0.0186,0.0000 8,1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2,TCCGAGATGC-TGTCACCTTA,27672345,26332525,1339820,0,0.0073,0.9516,0.0484,0.0000 8,1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2,ATAGAGTTCG-GCATAACGGC,30793373,30222140,571233,0,0.0082,0.9814,0.0186,0.0000 8,1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2,GCATTCCTTC-GAGCCTGCTT,30840327,24984593,5855734,0,0.0082,0.8101,0.1899,0.0000 8,1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2,AATCGTGCGG-GTTCAGTAGA,72439865,71150895,1288970,0,0.0192,0.9822,0.0178,0.0000 8,1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2,TACCGGAGCA-CTTAGCAGGC,50832583,49949167,883416,0,0.0135,0.9826,0.0174,0.0000 8,1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2,AGCACCAGTC-CTCGTGTAGC,26325997,25627443,698554,0,0.0070,0.9735,0.0265,0.0000 8,1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2,TACCTAGACT-GCATTCGAAT,37081429,36162644,918785,0,0.0098,0.9752,0.0248,0.0000 8,1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2,CAGACTGCAG-ACCGGCCTTA,42661446,40133122,2528324,0,0.0113,0.9407,0.0593,0.0000 8,1173_FM_T1_RNA_SLD_01_A23T55JLT4_2,GTTAGTGCCT-CTGCATAGCA,46928251,46044414,883837,0,0.0124,0.9812,0.0188,0.0000 8,1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2,CGCAATAAGA-CCTACAGCGT,19322710,18908012,414698,0,0.0051,0.9785,0.0215,0.0000 8,1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2,TCGGTCTGTT-TGGTTGGTAC,36543133,36005838,537295,0,0.0097,0.9853,0.0147,0.0000 8,1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2,CTAGACGAGC-GAGGATGGAT,33356881,32795471,561410,0,0.0088,0.9832,0.0168,0.0000 8,1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2,GTAATACTCG-CTCACGAATC,31837257,30052990,1784267,0,0.0084,0.9440,0.0560,0.0000 8,1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2,GATTCTTAGC-TGCTAGCGGT,22552658,22202472,350186,0,0.0060,0.9845,0.0155,0.0000 8,1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2,TGTGATCGCG-AGACGAGTCT,10288699,10011342,277357,0,0.0027,0.9730,0.0270,0.0000 8,1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2,ATCGAGAGAC-TGGAAGCAGA,22147449,21712682,434767,0,0.0059,0.9804,0.0196,0.0000 8,1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2,CTGAACGTAT-GCCAATACAT,28163024,27716442,446582,0,0.0075,0.9841,0.0159,0.0000 8,1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2,CACTAGACTT-TGTGGATTAG,42791540,42082184,709356,0,0.0113,0.9834,0.0166,0.0000 8,1173_T46_T1_RNA_SLD_01_A23T55JLT4_2,CGTCGCCTAT-TATCTTCTCG,35117883,32509263,2608620,0,0.0093,0.9257,0.0743,0.0000 8,Undetermined,,255971636,255971636,0,0,0.0678,1.0000,0.0000,0.0000