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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Demultiplex_Stats.csv
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11.0 KB
Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 07, 2026 11:54 PM

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
3 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1 TAGCGAGGCT-TTGCTCACGG 74779420 73640825 1138595 0 0.0201 0.9848 0.0152 0.0000
3 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1 CCAACTGTAT-GCGCTAGAGA 1795147 1756726 38421 0 0.0005 0.9786 0.0214 0.0000
3 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1 GAGTAGTGAC-GCGATGCCAA 60825382 59744934 1080448 0 0.0164 0.9822 0.0178 0.0000
3 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1 CCAGTATTCT-ACGAAGCGAT 13238393 13017028 221365 0 0.0036 0.9833 0.0167 0.0000
3 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1 ATCATACCGC-ATGTCGTACT 12983344 12763124 220220 0 0.0035 0.9830 0.0170 0.0000
3 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1 ATTCGCACTA-TCTGTATGGT 80278100 79255504 1022596 0 0.0216 0.9873 0.0127 0.0000
3 1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1 CTCTTCAGCA-TTGTCTCTAC 18460616 18069747 390869 0 0.0050 0.9788 0.0212 0.0000
3 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1 CTGTATGCCA-TTCCGGCTGT 90022093 88760796 1261297 0 0.0242 0.9860 0.0140 0.0000
3 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1 TCTGACTATG-TAACCAGATC 43113794 42525129 588665 0 0.0116 0.9863 0.0137 0.0000
3 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1 TGTGACGTAT-GCAGCGTTAG 3453869 3398930 54939 0 0.0009 0.9841 0.0159 0.0000
3 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1 AGAAGATTGG-AGAAGGTACT 49083575 48192650 890925 0 0.0132 0.9818 0.0182 0.0000
3 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1 ATCCAGCATG-AGAGCTCTAC 56891375 55522469 1368906 0 0.0153 0.9759 0.0241 0.0000
3 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1 GCGCCATATA-GAACCTCCTA 34902956 34247328 655628 0 0.0094 0.9812 0.0188 0.0000
3 1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1 CACTCGCATA-GAACGCGACA 36650247 36047296 602951 0 0.0099 0.9835 0.0165 0.0000
3 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1 AAGGTCAATG-GCATTATAGG 34180640 33643960 536680 0 0.0092 0.9843 0.0157 0.0000
3 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1 GTGACGCACA-CGTTGTTGCG 49874011 48965532 908479 0 0.0134 0.9818 0.0182 0.0000
3 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1 TGTCAGGCTT-GATTCCTTAC 74925210 73776913 1148297 0 0.0202 0.9847 0.0153 0.0000
3 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1 CACGTGATGG-TACAACGTGT 1946272 1912032 34240 0 0.0005 0.9824 0.0176 0.0000
3 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1 CCATCACGTG-TCTCCTGGTT 39046681 38023015 1023666 0 0.0105 0.9738 0.0262 0.0000
3 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1 ACCAGGAATT-AGCATGGCAT 82336081 80667543 1668538 0 0.0222 0.9797 0.0203 0.0000
3 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1 TAAGGCTCAC-GACGTTACTT 19537636 19208158 329478 0 0.0053 0.9831 0.0169 0.0000
3 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1 TGGCACTGAT-GCCATAGAAT 92207675 90718059 1489616 0 0.0248 0.9838 0.0162 0.0000
3 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1 CATATGGTGC-ACAGATCTCA 33535134 32959257 575877 0 0.0090 0.9828 0.0172 0.0000
3 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1 GCACTACCAG-GAAGACTTAG 46273662 45101899 1171763 0 0.0125 0.9747 0.0253 0.0000
3 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1 GCATAAGATC-GAGAACTGGA 47750859 46804192 946667 0 0.0129 0.9802 0.0198 0.0000
3 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1 AAGGTGTACT-AGCGCTACAG 1437322 1407878 29444 0 0.0004 0.9795 0.0205 0.0000
3 1173_FM_T1_RNA_SLD_01_A23T55JLT4_1 CTTCTAACCG-TGATCAGTCT 61776813 60738262 1038551 0 0.0166 0.9832 0.0168 0.0000
3 1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1 TCGACCAGCA-GTTCGAACTC 32845615 32274668 570947 0 0.0088 0.9826 0.0174 0.0000
3 1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1 GTGACACGTC-CTTACACTGA 51348838 50619857 728981 0 0.0138 0.9858 0.0142 0.0000
3 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1 AATGGACGCG-AAGTGCACCG 34063854 33255290 808564 0 0.0092 0.9763 0.0237 0.0000
3 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1 TCTCCGTACT-AGTTGTGATC 55951127 54914513 1036614 0 0.0151 0.9815 0.0185 0.0000
3 1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1 TGGAAGCACA-TCCAACACCG 29828254 29272883 555371 0 0.0080 0.9814 0.0186 0.0000
3 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1 GATAGACAAC-GTGTTCACGT 5802703 5695577 107126 0 0.0016 0.9815 0.0185 0.0000
3 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1 AGCGTCTCAT-CCTAGGCGAT 4179794 3862564 317230 0 0.0011 0.9241 0.0759 0.0000
3 1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1 CTCTATACTG-CGTTCAACCG 40264616 39173794 1090822 0 0.0108 0.9729 0.0271 0.0000
3 1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1 ATAGCCGGTT-TCTTATCCGG 67600950 65884283 1716667 0 0.0182 0.9746 0.0254 0.0000
3 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1 GTTCTCATCA-CCTCCATTCT 39025081 38415647 609434 0 0.0105 0.9844 0.0156 0.0000
3 1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1 CAATGCGTGT-ATGTTCGCGC 57848454 56717934 1130520 0 0.0156 0.9805 0.0195 0.0000
3 1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1 TGAGTGTACA-ATTCGCCGGT 45100154 44084965 1015189 0 0.0121 0.9775 0.0225 0.0000
3 1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1 TGCTTCCAAG-CAGATGTTAC 1295314 1271383 23931 0 0.0003 0.9815 0.0185 0.0000
3 1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1 CCTACTCTGC-TGCAATTGGC 13736025 13529320 206705 0 0.0037 0.9850 0.0150 0.0000
3 1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1 TCGCTGAGAG-AATGCTCTAG 554551 541098 13453 0 0.0001 0.9757 0.0243 0.0000
3 1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1 CGCTAATTGC-CCATCGCATT 4431250 4354245 77005 0 0.0012 0.9826 0.0174 0.0000
3 1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1 TCAGCTGTCA-ACAGCTCCTG 49993644 49028820 964824 0 0.0135 0.9807 0.0193 0.0000
3 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1 AGACGACAGA-GAGCTGGAAT 31071807 30354472 717335 0 0.0084 0.9769 0.0231 0.0000
3 1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1 TAGGTCCAGA-TGCTCATCCG 18918618 17438177 1480441 0 0.0051 0.9217 0.0783 0.0000
3 1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1 TAACCTGAAC-TCAATTGACG 3486616 3427785 58831 0 0.0009 0.9831 0.0169 0.0000
3 1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1 GATAGGTGAA-AGACGCAAGA 29461870 28668868 793002 0 0.0079 0.9731 0.0269 0.0000
3 1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1 CTTGTTACTG-AATTCGGTGG 25376686 24982181 394505 0 0.0068 0.9845 0.0155 0.0000
3 1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1 TCACCGTGGT-TCGCTCTGCT 29605865 29089726 516139 0 0.0080 0.9826 0.0174 0.0000
3 1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1 CAACTACCGC-ATGCTGCAGG 44667865 43891694 776171 0 0.0120 0.9826 0.0174 0.0000
3 1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1 ACTCGTCCAG-TGGTCCTCGT 55667758 54633696 1034062 0 0.0150 0.9814 0.0186 0.0000
3 1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1 TCCGGAGAAC-ATTCCTCTGG 37731850 37047919 683931 0 0.0102 0.9819 0.0181 0.0000
3 1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1 TTGTGAGAAG-TTCACTGGCT 35708592 35149479 559113 0 0.0096 0.9843 0.0157 0.0000
3 1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1 CCGAAGGTTC-TCTATCTGAC 1333588 1315490 18098 0 0.0004 0.9864 0.0136 0.0000
3 1173_9C_T1_RNA_SLD_01_A23T55JLT4_1 ATACACACCT-AGTGTGATAG 43656016 42876106 779910 0 0.0118 0.9821 0.0179 0.0000
3 FFPE_V4_0002_RNA_0001_A23T55JLT4_1 AGCCTCTGCT-TTCGCCTTAG 44083426 42341792 1741634 0 0.0119 0.9605 0.0395 0.0000
3 NTC_0001_0001_A23T55JLT4_1 CGGATCATTA-CCGTAACCTT 2142 2085 57 0 0.0000 0.9734 0.0266 0.0000
3 FFPE_HD789_01_RNA_13_A23T55JLT4_1 CTCTCTCTAG-ACTTGATTGG 74660081 73155791 1504290 0 0.0201 0.9799 0.0201 0.0000
3 1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2 AAGGCTCCAT-TGAAGATGGA 26106327 25692160 414167 0 0.0070 0.9841 0.0159 0.0000
3 1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2 GATAGATCAG-CGTACGCCAT 18618909 18255270 363639 0 0.0050 0.9805 0.0195 0.0000
3 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2 GCAGAAGTCT-CTGCGTCGAA 51563938 50637521 926417 0 0.0139 0.9820 0.0180 0.0000
3 1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2 TATACGATGC-CTCCTAATCT 29108120 28289437 818683 0 0.0078 0.9719 0.0281 0.0000
3 1173_C31_T1_RNA_SLD_01_A23T55JLT4_2 AACGCTCTGA-GAGTAACGTG 19349670 19017627 332043 0 0.0052 0.9828 0.0172 0.0000
3 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2 GATTGGCGAT-CTGTCTCATT 75428069 73807839 1620230 0 0.0203 0.9785 0.0215 0.0000
3 1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2 CAAGACGGAC-GTACTCCGTC 37434530 36852895 581635 0 0.0101 0.9845 0.0155 0.0000
3 1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2 CCACTCAACG-CCTGTCTAGA 51996720 50934452 1062268 0 0.0140 0.9796 0.0204 0.0000
3 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2 AGCCACTCGT-CCAAGAGGAT 27817481 23667061 4150420 0 0.0075 0.8508 0.1492 0.0000
3 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2 GCGAAGAATT-TCACGGATGA 35268381 34599712 668669 0 0.0095 0.9810 0.0190 0.0000
3 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2 TGTCGGTGCT-AGTTCTTCCG 20558 20221 337 0 0.0000 0.9836 0.0164 0.0000
3 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2 TCTACAGCTA-AATGGAAGAC 36236449 35549101 687348 0 0.0098 0.9810 0.0190 0.0000
3 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2 CAACCATGAT-ATAAGGTGAC 17440912 17171326 269586 0 0.0047 0.9845 0.0155 0.0000
3 1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2 CGCACATTAC-TGGAACGTAG 30641984 30091627 550357 0 0.0083 0.9820 0.0180 0.0000
3 1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2 ATCTAACCTG-CCTGTGGTTC 24224526 23631808 592718 0 0.0065 0.9755 0.0245 0.0000
3 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2 GCGACAATAT-ATTCGTACGG 35687564 35051774 635790 0 0.0096 0.9822 0.0178 0.0000
3 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2 TTGCCGTATC-ACATTAGCGG 96431159 94662002 1769157 0 0.0260 0.9817 0.0183 0.0000
3 1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2 GATCCACTTA-GTGTTCTGTT 35380723 34764728 615995 0 0.0095 0.9826 0.0174 0.0000
3 1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2 TCCGAGATGC-TGTCACCTTA 27044132 25704037 1340095 0 0.0073 0.9504 0.0496 0.0000
3 1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2 ATAGAGTTCG-GCATAACGGC 30045734 29525554 520180 0 0.0081 0.9827 0.0173 0.0000
3 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2 GCATTCCTTC-GAGCCTGCTT 30230749 24182501 6048248 0 0.0081 0.7999 0.2001 0.0000
3 1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2 AATCGTGCGG-GTTCAGTAGA 71215875 70039428 1176447 0 0.0192 0.9835 0.0165 0.0000
3 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2 TACCGGAGCA-CTTAGCAGGC 49739467 48914250 825217 0 0.0134 0.9834 0.0166 0.0000
3 1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2 AGCACCAGTC-CTCGTGTAGC 25781455 25022575 758880 0 0.0069 0.9706 0.0294 0.0000
3 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2 TACCTAGACT-GCATTCGAAT 36277095 35428508 848587 0 0.0098 0.9766 0.0234 0.0000
3 1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2 CAGACTGCAG-ACCGGCCTTA 41786736 39588315 2198421 0 0.0113 0.9474 0.0526 0.0000
3 1173_FM_T1_RNA_SLD_01_A23T55JLT4_2 GTTAGTGCCT-CTGCATAGCA 45937271 45124358 812913 0 0.0124 0.9823 0.0177 0.0000
3 1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2 CGCAATAAGA-CCTACAGCGT 19009077 18608381 400696 0 0.0051 0.9789 0.0211 0.0000
3 1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2 TCGGTCTGTT-TGGTTGGTAC 35766036 35281002 485034 0 0.0096 0.9864 0.0136 0.0000
3 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2 CTAGACGAGC-GAGGATGGAT 32809623 32285131 524492 0 0.0088 0.9840 0.0160 0.0000
3 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2 GTAATACTCG-CTCACGAATC 31261807 29387109 1874698 0 0.0084 0.9400 0.0600 0.0000
3 1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2 GATTCTTAGC-TGCTAGCGGT 22180273 21855048 325225 0 0.0060 0.9853 0.0147 0.0000
3 1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2 TGTGATCGCG-AGACGAGTCT 10146962 9883989 262973 0 0.0027 0.9741 0.0259 0.0000
3 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2 ATCGAGAGAC-TGGAAGCAGA 21745368 21337571 407797 0 0.0059 0.9812 0.0188 0.0000
3 1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2 CTGAACGTAT-GCCAATACAT 27547370 27138164 409206 0 0.0074 0.9851 0.0149 0.0000
3 1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2 CACTAGACTT-TGTGGATTAG 42047291 41391811 655480 0 0.0113 0.9844 0.0156 0.0000
3 1173_T46_T1_RNA_SLD_01_A23T55JLT4_2 CGTCGCCTAT-TATCTTCTCG 34406173 31763167 2643006 0 0.0093 0.9232 0.0768 0.0000
3 Undetermined 259502348 259502348 0 0 0.0699 1.0000 0.0000 0.0000
98 rows