Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
3,1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1,TAGCGAGGCT-TTGCTCACGG,74779420,73640825,1138595,0,0.0201,0.9848,0.0152,0.0000
3,1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1,CCAACTGTAT-GCGCTAGAGA,1795147,1756726,38421,0,0.0005,0.9786,0.0214,0.0000
3,1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1,GAGTAGTGAC-GCGATGCCAA,60825382,59744934,1080448,0,0.0164,0.9822,0.0178,0.0000
3,1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1,CCAGTATTCT-ACGAAGCGAT,13238393,13017028,221365,0,0.0036,0.9833,0.0167,0.0000
3,1173_C31_T1_RNA_SLD_01_A23T55JLT4_1,ATCATACCGC-ATGTCGTACT,12983344,12763124,220220,0,0.0035,0.9830,0.0170,0.0000
3,1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1,ATTCGCACTA-TCTGTATGGT,80278100,79255504,1022596,0,0.0216,0.9873,0.0127,0.0000
3,1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1,CTCTTCAGCA-TTGTCTCTAC,18460616,18069747,390869,0,0.0050,0.9788,0.0212,0.0000
3,1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1,CTGTATGCCA-TTCCGGCTGT,90022093,88760796,1261297,0,0.0242,0.9860,0.0140,0.0000
3,1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1,TCTGACTATG-TAACCAGATC,43113794,42525129,588665,0,0.0116,0.9863,0.0137,0.0000
3,1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1,TGTGACGTAT-GCAGCGTTAG,3453869,3398930,54939,0,0.0009,0.9841,0.0159,0.0000
3,1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1,AGAAGATTGG-AGAAGGTACT,49083575,48192650,890925,0,0.0132,0.9818,0.0182,0.0000
3,1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1,ATCCAGCATG-AGAGCTCTAC,56891375,55522469,1368906,0,0.0153,0.9759,0.0241,0.0000
3,1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1,GCGCCATATA-GAACCTCCTA,34902956,34247328,655628,0,0.0094,0.9812,0.0188,0.0000
3,1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1,CACTCGCATA-GAACGCGACA,36650247,36047296,602951,0,0.0099,0.9835,0.0165,0.0000
3,1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1,AAGGTCAATG-GCATTATAGG,34180640,33643960,536680,0,0.0092,0.9843,0.0157,0.0000
3,1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1,GTGACGCACA-CGTTGTTGCG,49874011,48965532,908479,0,0.0134,0.9818,0.0182,0.0000
3,1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1,TGTCAGGCTT-GATTCCTTAC,74925210,73776913,1148297,0,0.0202,0.9847,0.0153,0.0000
3,1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1,CACGTGATGG-TACAACGTGT,1946272,1912032,34240,0,0.0005,0.9824,0.0176,0.0000
3,1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1,CCATCACGTG-TCTCCTGGTT,39046681,38023015,1023666,0,0.0105,0.9738,0.0262,0.0000
3,1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1,ACCAGGAATT-AGCATGGCAT,82336081,80667543,1668538,0,0.0222,0.9797,0.0203,0.0000
3,1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1,TAAGGCTCAC-GACGTTACTT,19537636,19208158,329478,0,0.0053,0.9831,0.0169,0.0000
3,1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1,TGGCACTGAT-GCCATAGAAT,92207675,90718059,1489616,0,0.0248,0.9838,0.0162,0.0000
3,1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1,CATATGGTGC-ACAGATCTCA,33535134,32959257,575877,0,0.0090,0.9828,0.0172,0.0000
3,1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1,GCACTACCAG-GAAGACTTAG,46273662,45101899,1171763,0,0.0125,0.9747,0.0253,0.0000
3,1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1,GCATAAGATC-GAGAACTGGA,47750859,46804192,946667,0,0.0129,0.9802,0.0198,0.0000
3,1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1,AAGGTGTACT-AGCGCTACAG,1437322,1407878,29444,0,0.0004,0.9795,0.0205,0.0000
3,1173_FM_T1_RNA_SLD_01_A23T55JLT4_1,CTTCTAACCG-TGATCAGTCT,61776813,60738262,1038551,0,0.0166,0.9832,0.0168,0.0000
3,1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1,TCGACCAGCA-GTTCGAACTC,32845615,32274668,570947,0,0.0088,0.9826,0.0174,0.0000
3,1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1,GTGACACGTC-CTTACACTGA,51348838,50619857,728981,0,0.0138,0.9858,0.0142,0.0000
3,1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1,AATGGACGCG-AAGTGCACCG,34063854,33255290,808564,0,0.0092,0.9763,0.0237,0.0000
3,1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1,TCTCCGTACT-AGTTGTGATC,55951127,54914513,1036614,0,0.0151,0.9815,0.0185,0.0000
3,1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1,TGGAAGCACA-TCCAACACCG,29828254,29272883,555371,0,0.0080,0.9814,0.0186,0.0000
3,1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1,GATAGACAAC-GTGTTCACGT,5802703,5695577,107126,0,0.0016,0.9815,0.0185,0.0000
3,1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1,AGCGTCTCAT-CCTAGGCGAT,4179794,3862564,317230,0,0.0011,0.9241,0.0759,0.0000
3,1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1,CTCTATACTG-CGTTCAACCG,40264616,39173794,1090822,0,0.0108,0.9729,0.0271,0.0000
3,1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1,ATAGCCGGTT-TCTTATCCGG,67600950,65884283,1716667,0,0.0182,0.9746,0.0254,0.0000
3,1173_T46_T1_RNA_SLD_01_A23T55JLT4_1,GTTCTCATCA-CCTCCATTCT,39025081,38415647,609434,0,0.0105,0.9844,0.0156,0.0000
3,1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1,CAATGCGTGT-ATGTTCGCGC,57848454,56717934,1130520,0,0.0156,0.9805,0.0195,0.0000
3,1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1,TGAGTGTACA-ATTCGCCGGT,45100154,44084965,1015189,0,0.0121,0.9775,0.0225,0.0000
3,1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1,TGCTTCCAAG-CAGATGTTAC,1295314,1271383,23931,0,0.0003,0.9815,0.0185,0.0000
3,1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1,CCTACTCTGC-TGCAATTGGC,13736025,13529320,206705,0,0.0037,0.9850,0.0150,0.0000
3,1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1,TCGCTGAGAG-AATGCTCTAG,554551,541098,13453,0,0.0001,0.9757,0.0243,0.0000
3,1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1,CGCTAATTGC-CCATCGCATT,4431250,4354245,77005,0,0.0012,0.9826,0.0174,0.0000
3,1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1,TCAGCTGTCA-ACAGCTCCTG,49993644,49028820,964824,0,0.0135,0.9807,0.0193,0.0000
3,1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1,AGACGACAGA-GAGCTGGAAT,31071807,30354472,717335,0,0.0084,0.9769,0.0231,0.0000
3,1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1,TAGGTCCAGA-TGCTCATCCG,18918618,17438177,1480441,0,0.0051,0.9217,0.0783,0.0000
3,1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1,TAACCTGAAC-TCAATTGACG,3486616,3427785,58831,0,0.0009,0.9831,0.0169,0.0000
3,1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1,GATAGGTGAA-AGACGCAAGA,29461870,28668868,793002,0,0.0079,0.9731,0.0269,0.0000
3,1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1,CTTGTTACTG-AATTCGGTGG,25376686,24982181,394505,0,0.0068,0.9845,0.0155,0.0000
3,1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1,TCACCGTGGT-TCGCTCTGCT,29605865,29089726,516139,0,0.0080,0.9826,0.0174,0.0000
3,1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1,CAACTACCGC-ATGCTGCAGG,44667865,43891694,776171,0,0.0120,0.9826,0.0174,0.0000
3,1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1,ACTCGTCCAG-TGGTCCTCGT,55667758,54633696,1034062,0,0.0150,0.9814,0.0186,0.0000
3,1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1,TCCGGAGAAC-ATTCCTCTGG,37731850,37047919,683931,0,0.0102,0.9819,0.0181,0.0000
3,1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1,TTGTGAGAAG-TTCACTGGCT,35708592,35149479,559113,0,0.0096,0.9843,0.0157,0.0000
3,1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1,CCGAAGGTTC-TCTATCTGAC,1333588,1315490,18098,0,0.0004,0.9864,0.0136,0.0000
3,1173_9C_T1_RNA_SLD_01_A23T55JLT4_1,ATACACACCT-AGTGTGATAG,43656016,42876106,779910,0,0.0118,0.9821,0.0179,0.0000
3,FFPE_V4_0002_RNA_0001_A23T55JLT4_1,AGCCTCTGCT-TTCGCCTTAG,44083426,42341792,1741634,0,0.0119,0.9605,0.0395,0.0000
3,NTC_0001_0001_A23T55JLT4_1,CGGATCATTA-CCGTAACCTT,2142,2085,57,0,0.0000,0.9734,0.0266,0.0000
3,FFPE_HD789_01_RNA_13_A23T55JLT4_1,CTCTCTCTAG-ACTTGATTGG,74660081,73155791,1504290,0,0.0201,0.9799,0.0201,0.0000
3,1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2,AAGGCTCCAT-TGAAGATGGA,26106327,25692160,414167,0,0.0070,0.9841,0.0159,0.0000
3,1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2,GATAGATCAG-CGTACGCCAT,18618909,18255270,363639,0,0.0050,0.9805,0.0195,0.0000
3,1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2,GCAGAAGTCT-CTGCGTCGAA,51563938,50637521,926417,0,0.0139,0.9820,0.0180,0.0000
3,1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2,TATACGATGC-CTCCTAATCT,29108120,28289437,818683,0,0.0078,0.9719,0.0281,0.0000
3,1173_C31_T1_RNA_SLD_01_A23T55JLT4_2,AACGCTCTGA-GAGTAACGTG,19349670,19017627,332043,0,0.0052,0.9828,0.0172,0.0000
3,1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2,GATTGGCGAT-CTGTCTCATT,75428069,73807839,1620230,0,0.0203,0.9785,0.0215,0.0000
3,1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2,CAAGACGGAC-GTACTCCGTC,37434530,36852895,581635,0,0.0101,0.9845,0.0155,0.0000
3,1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2,CCACTCAACG-CCTGTCTAGA,51996720,50934452,1062268,0,0.0140,0.9796,0.0204,0.0000
3,1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2,AGCCACTCGT-CCAAGAGGAT,27817481,23667061,4150420,0,0.0075,0.8508,0.1492,0.0000
3,1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2,GCGAAGAATT-TCACGGATGA,35268381,34599712,668669,0,0.0095,0.9810,0.0190,0.0000
3,1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2,TGTCGGTGCT-AGTTCTTCCG,20558,20221,337,0,0.0000,0.9836,0.0164,0.0000
3,1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2,TCTACAGCTA-AATGGAAGAC,36236449,35549101,687348,0,0.0098,0.9810,0.0190,0.0000
3,1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2,CAACCATGAT-ATAAGGTGAC,17440912,17171326,269586,0,0.0047,0.9845,0.0155,0.0000
3,1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2,CGCACATTAC-TGGAACGTAG,30641984,30091627,550357,0,0.0083,0.9820,0.0180,0.0000
3,1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2,ATCTAACCTG-CCTGTGGTTC,24224526,23631808,592718,0,0.0065,0.9755,0.0245,0.0000
3,1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2,GCGACAATAT-ATTCGTACGG,35687564,35051774,635790,0,0.0096,0.9822,0.0178,0.0000
3,1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2,TTGCCGTATC-ACATTAGCGG,96431159,94662002,1769157,0,0.0260,0.9817,0.0183,0.0000
3,1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2,GATCCACTTA-GTGTTCTGTT,35380723,34764728,615995,0,0.0095,0.9826,0.0174,0.0000
3,1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2,TCCGAGATGC-TGTCACCTTA,27044132,25704037,1340095,0,0.0073,0.9504,0.0496,0.0000
3,1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2,ATAGAGTTCG-GCATAACGGC,30045734,29525554,520180,0,0.0081,0.9827,0.0173,0.0000
3,1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2,GCATTCCTTC-GAGCCTGCTT,30230749,24182501,6048248,0,0.0081,0.7999,0.2001,0.0000
3,1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2,AATCGTGCGG-GTTCAGTAGA,71215875,70039428,1176447,0,0.0192,0.9835,0.0165,0.0000
3,1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2,TACCGGAGCA-CTTAGCAGGC,49739467,48914250,825217,0,0.0134,0.9834,0.0166,0.0000
3,1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2,AGCACCAGTC-CTCGTGTAGC,25781455,25022575,758880,0,0.0069,0.9706,0.0294,0.0000
3,1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2,TACCTAGACT-GCATTCGAAT,36277095,35428508,848587,0,0.0098,0.9766,0.0234,0.0000
3,1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2,CAGACTGCAG-ACCGGCCTTA,41786736,39588315,2198421,0,0.0113,0.9474,0.0526,0.0000
3,1173_FM_T1_RNA_SLD_01_A23T55JLT4_2,GTTAGTGCCT-CTGCATAGCA,45937271,45124358,812913,0,0.0124,0.9823,0.0177,0.0000
3,1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2,CGCAATAAGA-CCTACAGCGT,19009077,18608381,400696,0,0.0051,0.9789,0.0211,0.0000
3,1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2,TCGGTCTGTT-TGGTTGGTAC,35766036,35281002,485034,0,0.0096,0.9864,0.0136,0.0000
3,1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2,CTAGACGAGC-GAGGATGGAT,32809623,32285131,524492,0,0.0088,0.9840,0.0160,0.0000
3,1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2,GTAATACTCG-CTCACGAATC,31261807,29387109,1874698,0,0.0084,0.9400,0.0600,0.0000
3,1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2,GATTCTTAGC-TGCTAGCGGT,22180273,21855048,325225,0,0.0060,0.9853,0.0147,0.0000
3,1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2,TGTGATCGCG-AGACGAGTCT,10146962,9883989,262973,0,0.0027,0.9741,0.0259,0.0000
3,1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2,ATCGAGAGAC-TGGAAGCAGA,21745368,21337571,407797,0,0.0059,0.9812,0.0188,0.0000
3,1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2,CTGAACGTAT-GCCAATACAT,27547370,27138164,409206,0,0.0074,0.9851,0.0149,0.0000
3,1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2,CACTAGACTT-TGTGGATTAG,42047291,41391811,655480,0,0.0113,0.9844,0.0156,0.0000
3,1173_T46_T1_RNA_SLD_01_A23T55JLT4_2,CGTCGCCTAT-TATCTTCTCG,34406173,31763167,2643006,0,0.0093,0.9232,0.0768,0.0000
3,Undetermined,,259502348,259502348,0,0,0.0699,1.0000,0.0000,0.0000