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Demultiplex_Stats_aggregate.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
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Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 08, 2026 12:03 AM

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SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
1173_9C_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ATACACACCT-AGTGTGATAG 351448728 345035380 6413348 0 0.0117 0.9818 0.0182 0.0
1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TTGTGAGAAG-TTCACTGGCT 287031731 282400537 4631194 0 0.0096 0.9839 0.0161 0.0
1173_C31_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ATCATACCGC-ATGTCGTACT 104332125 102509094 1823031 0 0.0035 0.9825 0.0175 0.0
1173_C31_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 AACGCTCTGA-GAGTAACGTG 155722141 152980047 2742094 0 0.0052 0.9824 0.0176 0.0
1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 AGCGTCTCAT-CCTAGGCGAT 33722075 31223167 2498908 0 0.0011 0.9259 0.0741 0.0
1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 ATCGAGAGAC-TGGAAGCAGA 175742467 172370718 3371749 0 0.0059 0.9808 0.0192 0.0
1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 AGACGACAGA-GAGCTGGAAT 248545138 242662239 5882899 0 0.0083 0.9763 0.0237 0.0
1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GAGTAGTGAC-GCGATGCCAA 490051387 481125318 8926069 0 0.0164 0.9818 0.0182 0.0
1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GCAGAAGTCT-CTGCGTCGAA 415674567 407993556 7681011 0 0.0139 0.9815 0.0185 0.0
1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 AAGGTGTACT-AGCGCTACAG 11568905 11329006 239899 0 0.0004 0.9793 0.0207 0.0
1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CAGACTGCAG-ACCGGCCTTA 336474539 317635237 18839302 0 0.0112 0.944 0.056 0.0
1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TGTCAGGCTT-GATTCCTTAC 605243290 595714415 9528875 0 0.0202 0.9843 0.0157 0.0
1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TTGCCGTATC-ACATTAGCGG 779631836 765008415 14623421 0 0.0261 0.9812 0.0188 0.0
1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TAGCGAGGCT-TTGCTCACGG 605745434 596255714 9489720 0 0.0202 0.9843 0.0157 0.0
1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 AAGGCTCCAT-TGAAGATGGA 210385749 206970285 3415464 0 0.007 0.9838 0.0162 0.0
1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GCATAAGATC-GAGAACTGGA 383882668 376129576 7753092 0 0.0128 0.9798 0.0202 0.0
1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TACCTAGACT-GCATTCGAAT 292908053 285860776 7047277 0 0.0098 0.9759 0.0241 0.0
1173_FM_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CTTCTAACCG-TGATCAGTCT 495719859 487139731 8580128 0 0.0166 0.9827 0.0173 0.0
1173_FM_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GTTAGTGCCT-CTGCATAGCA 371342743 364617934 6724809 0 0.0124 0.9819 0.0181 0.0
1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 AGAAGATTGG-AGAAGGTACT 394768934 387409027 7359907 0 0.0132 0.9814 0.0186 0.0
1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TGTCGGTGCT-AGTTCTTCCG 165299 162498 2801 0 0.0 0.9831 0.0169 0.0
1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GTGACGCACA-CGTTGTTGCG 400365841 392820048 7545793 0 0.0134 0.9812 0.0188 0.0
1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GCGACAATAT-ATTCGTACGG 288402913 283167609 5235304 0 0.0096 0.9818 0.0182 0.0
1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CACTCGCATA-GAACGCGACA 296473801 291469160 5004641 0 0.0099 0.9831 0.0169 0.0
1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CGCACATTAC-TGGAACGTAG 247132016 242600515 4531501 0 0.0083 0.9817 0.0183 0.0
1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GTGACACGTC-CTTACACTGA 413791225 407710559 6080666 0 0.0138 0.9853 0.0147 0.0
1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TCGGTCTGTT-TGGTTGGTAC 288477360 284410814 4066546 0 0.0096 0.9859 0.0141 0.0
1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CACGTGATGG-TACAACGTGT 15652731 15370419 282312 0 0.0005 0.982 0.018 0.0
1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GATCCACTTA-GTGTTCTGTT 285417018 280292081 5124937 0 0.0095 0.982 0.018 0.0
1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CTGTATGCCA-TTCCGGCTGT 724062550 713531893 10530657 0 0.0242 0.9855 0.0145 0.0
1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CCACTCAACG-CCTGTCTAGA 419042007 410333168 8708839 0 0.014 0.9792 0.0208 0.0
1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ACCAGGAATT-AGCATGGCAT 663278038 649518608 13759430 0 0.0222 0.9793 0.0207 0.0
1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 ATAGAGTTCG-GCATAACGGC 242810737 238473442 4337295 0 0.0081 0.9821 0.0179 0.0
1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCAGCTGTCA-ACAGCTCCTG 402335540 394402719 7932821 0 0.0134 0.9803 0.0197 0.0
1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCGACCAGCA-GTTCGAACTC 264914049 260244175 4669874 0 0.0089 0.9824 0.0176 0.0
1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CGCAATAAGA-CCTACAGCGT 152920464 149696604 3223860 0 0.0051 0.9789 0.0211 0.0
1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TGGAAGCACA-TCCAACACCG 240179542 235578403 4601139 0 0.008 0.9808 0.0192 0.0
1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GATTCTTAGC-TGCTAGCGGT 178696169 175999889 2696280 0 0.006 0.9849 0.0151 0.0
1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TAACCTGAAC-TCAATTGACG 28088428 27601933 486495 0 0.0009 0.9827 0.0173 0.0
1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TGGCACTGAT-GCCATAGAAT 745236894 732901120 12335774 0 0.0249 0.9834 0.0166 0.0
1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 AATCGTGCGG-GTTCAGTAGA 572840546 563038174 9802372 0 0.0191 0.9829 0.0171 0.0
1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CATATGGTGC-ACAGATCTCA 270188602 265479786 4708816 0 0.009 0.9826 0.0174 0.0
1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TACCGGAGCA-CTTAGCAGGC 401190922 394385615 6805307 0 0.0134 0.983 0.017 0.0
1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CCAACTGTAT-GCGCTAGAGA 14445973 14129048 316925 0 0.0005 0.9781 0.0219 0.0
1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GATAGATCAG-CGTACGCCAT 149937922 146928902 3009020 0 0.005 0.9799 0.0201 0.0
1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CCATCACGTG-TCTCCTGGTT 314810355 306513341 8297014 0 0.0105 0.9736 0.0264 0.0
1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TCCGAGATGC-TGTCACCTTA 219067645 208264005 10803640 0 0.0073 0.9507 0.0493 0.0
1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CTCTTCAGCA-TTGTCTCTAC 148672125 145650750 3021375 0 0.005 0.9797 0.0203 0.0
1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CAAGACGGAC-GTACTCCGTC 301661002 296821005 4839997 0 0.0101 0.984 0.016 0.0
1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CCGAAGGTTC-TCTATCTGAC 10758509 10606092 152417 0 0.0004 0.9858 0.0142 0.0
1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCTGACTATG-TAACCAGATC 347602978 342697406 4905572 0 0.0116 0.9859 0.0141 0.0
1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 AGCCACTCGT-CCAAGAGGAT 224574149 191235653 33338496 0 0.0075 0.8515 0.1485 0.0
1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GATAGACAAC-GTGTTCACGT 46781141 45899086 882055 0 0.0016 0.9811 0.0189 0.0
1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TGTGATCGCG-AGACGAGTCT 81613010 79454263 2158747 0 0.0027 0.9735 0.0265 0.0
1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ACTCGTCCAG-TGGTCCTCGT 448430593 439918023 8512570 0 0.015 0.981 0.019 0.0
1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ATAGCCGGTT-TCTTATCCGG 545996875 531926641 14070234 0 0.0182 0.9742 0.0258 0.0
1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CACTAGACTT-TGTGGATTAG 339025373 333588923 5436450 0 0.0113 0.984 0.016 0.0
1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GATAGGTGAA-AGACGCAAGA 236584925 230067266 6517659 0 0.0079 0.9725 0.0275 0.0
1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TAGGTCCAGA-TGCTCATCCG 152303812 139641404 12662408 0 0.0051 0.9169 0.0831 0.0
1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ATCCAGCATG-AGAGCTCTAC 459330898 448427546 10903352 0 0.0154 0.9763 0.0237 0.0
1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TCTACAGCTA-AATGGAAGAC 291926864 286334727 5592137 0 0.0098 0.9808 0.0192 0.0
1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CAATGCGTGT-ATGTTCGCGC 467001291 457645700 9355591 0 0.0156 0.98 0.02 0.0
1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CTTGTTACTG-AATTCGGTGG 203663248 200402137 3261111 0 0.0068 0.984 0.016 0.0
1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCACCGTGGT-TCGCTCTGCT 239310024 235028591 4281433 0 0.008 0.9821 0.0179 0.0
1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CTCTATACTG-CGTTCAACCG 324005525 315030107 8975418 0 0.0108 0.9723 0.0277 0.0
1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CTGAACGTAT-GCCAATACAT 222466527 219060004 3406523 0 0.0074 0.9847 0.0153 0.0
1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 AATGGACGCG-AAGTGCACCG 273771686 267109194 6662492 0 0.0092 0.9757 0.0243 0.0
1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CTAGACGAGC-GAGGATGGAT 264024627 259698914 4325713 0 0.0088 0.9836 0.0164 0.0
1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 ATTCGCACTA-TCTGTATGGT 647600390 638980098 8620292 0 0.0216 0.9867 0.0133 0.0
1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GATTGGCGAT-CTGTCTCATT 609856960 596954736 12902224 0 0.0204 0.9788 0.0212 0.0
1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCGCTGAGAG-AATGCTCTAG 4457634 4348107 109527 0 0.0001 0.9754 0.0246 0.0
1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CCAGTATTCT-ACGAAGCGAT 106769183 104946415 1822768 0 0.0036 0.9829 0.0171 0.0
1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 TATACGATGC-CTCCTAATCT 235349608 229366941 5982667 0 0.0079 0.9746 0.0254 0.0
1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCTCCGTACT-AGTTGTGATC 451227269 442790558 8436711 0 0.0151 0.9813 0.0187 0.0
1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GTAATACTCG-CTCACGAATC 251971581 236983193 14988388 0 0.0084 0.9405 0.0595 0.0
1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TGCTTCCAAG-CAGATGTTAC 10424476 10231560 192916 0 0.0003 0.9815 0.0185 0.0
1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TAAGGCTCAC-GACGTTACTT 157409511 154667447 2742064 0 0.0053 0.9826 0.0174 0.0
1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GCATTCCTTC-GAGCCTGCTT 243708764 195668845 48039919 0 0.0081 0.8029 0.1971 0.0
1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GCGCCATATA-GAACCTCCTA 281663000 276277993 5385007 0 0.0094 0.9809 0.0191 0.0
1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CAACCATGAT-ATAAGGTGAC 140421959 138200586 2221373 0 0.0047 0.9842 0.0158 0.0
1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CCTACTCTGC-TGCAATTGGC 110493294 108785358 1707936 0 0.0037 0.9845 0.0155 0.0
1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TGTGACGTAT-GCAGCGTTAG 27864917 27408450 456467 0 0.0009 0.9836 0.0164 0.0
1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 GCGAAGAATT-TCACGGATGA 284668702 279172309 5496393 0 0.0095 0.9807 0.0193 0.0
1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CAACTACCGC-ATGCTGCAGG 359293847 352867276 6426571 0 0.012 0.9821 0.0179 0.0
1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 AAGGTCAATG-GCATTATAGG 274602657 270149624 4453033 0 0.0092 0.9838 0.0162 0.0
1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 ATCTAACCTG-CCTGTGGTTC 194994800 190188326 4806474 0 0.0065 0.9754 0.0246 0.0
1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TCCGGAGAAC-ATTCCTCTGG 303932819 298376911 5555908 0 0.0102 0.9817 0.0183 0.0
1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 TGAGTGTACA-ATTCGCCGGT 363150906 354724978 8425928 0 0.0121 0.9768 0.0232 0.0
1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 CGCTAATTGC-CCATCGCATT 35664157 35035346 628811 0 0.0012 0.9824 0.0176 0.0
1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GCACTACCAG-GAAGACTTAG 372836202 363300993 9535209 0 0.0125 0.9744 0.0256 0.0
1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 AGCACCAGTC-CTCGTGTAGC 208199372 202509943 5689429 0 0.007 0.9727 0.0273 0.0
1173_T46_T1_RNA_SLD_01_A23T55JLT4_1 1,2,3,4,5,6,7,8 GTTCTCATCA-CCTCCATTCT 314730154 309703859 5026295 0 0.0105 0.984 0.016 0.0
1173_T46_T1_RNA_SLD_01_A23T55JLT4_2 1,2,3,4,5,6,7,8 CGTCGCCTAT-TATCTTCTCG 278186770 257147004 21039766 0 0.0093 0.9244 0.0756 0.0
FFPE_HD789_01_RNA_13_A23T55JLT4_1 1,2,3,4,5,6,7,8 CTCTCTCTAG-ACTTGATTGG 604274477 591896430 12378047 0 0.0202 0.9795 0.0205 0.0
FFPE_V4_0002_RNA_0001_A23T55JLT4_1 1,2,3,4,5,6,7,8 AGCCTCTGCT-TTCGCCTTAG 356161534 342100926 14060608 0 0.0119 0.9605 0.0395 0.0
NTC_0001_0001_A23T55JLT4_1 1,2,3,4,5,6,7,8 CGGATCATTA-CCGTAACCTT 17452 17032 420 0 0.0 0.9759 0.0241 0.0
Undetermined 1,2,3,4,5,6,7,8 2069920921 2069920921 0 0 0.0692 1.0 0.0 0.0
98 rows