SampleID,Lanes,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
1173_9C_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ATACACACCT-AGTGTGATAG,351448728,345035380,6413348,0,0.0117,0.9818,0.0182,0.0
1173_BEE_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TTGTGAGAAG-TTCACTGGCT,287031731,282400537,4631194,0,0.0096,0.9839,0.0161,0.0
1173_C31_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ATCATACCGC-ATGTCGTACT,104332125,102509094,1823031,0,0.0035,0.9825,0.0175,0.0
1173_C31_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",AACGCTCTGA-GAGTAACGTG,155722141,152980047,2742094,0,0.0052,0.9824,0.0176,0.0
1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AGCGTCTCAT-CCTAGGCGAT,33722075,31223167,2498908,0,0.0011,0.9259,0.0741,0.0
1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",ATCGAGAGAC-TGGAAGCAGA,175742467,172370718,3371749,0,0.0059,0.9808,0.0192,0.0
1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AGACGACAGA-GAGCTGGAAT,248545138,242662239,5882899,0,0.0083,0.9763,0.0237,0.0
1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GAGTAGTGAC-GCGATGCCAA,490051387,481125318,8926069,0,0.0164,0.9818,0.0182,0.0
1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GCAGAAGTCT-CTGCGTCGAA,415674567,407993556,7681011,0,0.0139,0.9815,0.0185,0.0
1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AAGGTGTACT-AGCGCTACAG,11568905,11329006,239899,0,0.0004,0.9793,0.0207,0.0
1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CAGACTGCAG-ACCGGCCTTA,336474539,317635237,18839302,0,0.0112,0.944,0.056,0.0
1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TGTCAGGCTT-GATTCCTTAC,605243290,595714415,9528875,0,0.0202,0.9843,0.0157,0.0
1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TTGCCGTATC-ACATTAGCGG,779631836,765008415,14623421,0,0.0261,0.9812,0.0188,0.0
1173_DSO_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TAGCGAGGCT-TTGCTCACGG,605745434,596255714,9489720,0,0.0202,0.9843,0.0157,0.0
1173_DSO_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",AAGGCTCCAT-TGAAGATGGA,210385749,206970285,3415464,0,0.007,0.9838,0.0162,0.0
1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GCATAAGATC-GAGAACTGGA,383882668,376129576,7753092,0,0.0128,0.9798,0.0202,0.0
1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TACCTAGACT-GCATTCGAAT,292908053,285860776,7047277,0,0.0098,0.9759,0.0241,0.0
1173_FM_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CTTCTAACCG-TGATCAGTCT,495719859,487139731,8580128,0,0.0166,0.9827,0.0173,0.0
1173_FM_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GTTAGTGCCT-CTGCATAGCA,371342743,364617934,6724809,0,0.0124,0.9819,0.0181,0.0
1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AGAAGATTGG-AGAAGGTACT,394768934,387409027,7359907,0,0.0132,0.9814,0.0186,0.0
1173_FWA_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TGTCGGTGCT-AGTTCTTCCG,165299,162498,2801,0,0.0,0.9831,0.0169,0.0
1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GTGACGCACA-CGTTGTTGCG,400365841,392820048,7545793,0,0.0134,0.9812,0.0188,0.0
1173_G2E_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GCGACAATAT-ATTCGTACGG,288402913,283167609,5235304,0,0.0096,0.9818,0.0182,0.0
1173_GFO_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CACTCGCATA-GAACGCGACA,296473801,291469160,5004641,0,0.0099,0.9831,0.0169,0.0
1173_GFO_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CGCACATTAC-TGGAACGTAG,247132016,242600515,4531501,0,0.0083,0.9817,0.0183,0.0
1173_GXL_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GTGACACGTC-CTTACACTGA,413791225,407710559,6080666,0,0.0138,0.9853,0.0147,0.0
1173_GXL_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TCGGTCTGTT-TGGTTGGTAC,288477360,284410814,4066546,0,0.0096,0.9859,0.0141,0.0
1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CACGTGATGG-TACAACGTGT,15652731,15370419,282312,0,0.0005,0.982,0.018,0.0
1173_GZ1_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GATCCACTTA-GTGTTCTGTT,285417018,280292081,5124937,0,0.0095,0.982,0.018,0.0
1173_H2E_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CTGTATGCCA-TTCCGGCTGT,724062550,713531893,10530657,0,0.0242,0.9855,0.0145,0.0
1173_H2E_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CCACTCAACG-CCTGTCTAGA,419042007,410333168,8708839,0,0.014,0.9792,0.0208,0.0
1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ACCAGGAATT-AGCATGGCAT,663278038,649518608,13759430,0,0.0222,0.9793,0.0207,0.0
1173_HOB_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",ATAGAGTTCG-GCATAACGGC,242810737,238473442,4337295,0,0.0081,0.9821,0.0179,0.0
1173_HRO_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCAGCTGTCA-ACAGCTCCTG,402335540,394402719,7932821,0,0.0134,0.9803,0.0197,0.0
1173_IT6_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCGACCAGCA-GTTCGAACTC,264914049,260244175,4669874,0,0.0089,0.9824,0.0176,0.0
1173_IT6_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CGCAATAAGA-CCTACAGCGT,152920464,149696604,3223860,0,0.0051,0.9789,0.0211,0.0
1173_J3R_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TGGAAGCACA-TCCAACACCG,240179542,235578403,4601139,0,0.008,0.9808,0.0192,0.0
1173_J3R_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GATTCTTAGC-TGCTAGCGGT,178696169,175999889,2696280,0,0.006,0.9849,0.0151,0.0
1173_JIG_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TAACCTGAAC-TCAATTGACG,28088428,27601933,486495,0,0.0009,0.9827,0.0173,0.0
1173_JLC_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TGGCACTGAT-GCCATAGAAT,745236894,732901120,12335774,0,0.0249,0.9834,0.0166,0.0
1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",AATCGTGCGG-GTTCAGTAGA,572840546,563038174,9802372,0,0.0191,0.9829,0.0171,0.0
1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CATATGGTGC-ACAGATCTCA,270188602,265479786,4708816,0,0.009,0.9826,0.0174,0.0
1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TACCGGAGCA-CTTAGCAGGC,401190922,394385615,6805307,0,0.0134,0.983,0.017,0.0
1173_K3O_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CCAACTGTAT-GCGCTAGAGA,14445973,14129048,316925,0,0.0005,0.9781,0.0219,0.0
1173_K3O_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GATAGATCAG-CGTACGCCAT,149937922,146928902,3009020,0,0.005,0.9799,0.0201,0.0
1173_K7E_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CCATCACGTG-TCTCCTGGTT,314810355,306513341,8297014,0,0.0105,0.9736,0.0264,0.0
1173_K7E_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TCCGAGATGC-TGTCACCTTA,219067645,208264005,10803640,0,0.0073,0.9507,0.0493,0.0
1173_KQG_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CTCTTCAGCA-TTGTCTCTAC,148672125,145650750,3021375,0,0.005,0.9797,0.0203,0.0
1173_KQG_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CAAGACGGAC-GTACTCCGTC,301661002,296821005,4839997,0,0.0101,0.984,0.016,0.0
1173_KRT_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CCGAAGGTTC-TCTATCTGAC,10758509,10606092,152417,0,0.0004,0.9858,0.0142,0.0
1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCTGACTATG-TAACCAGATC,347602978,342697406,4905572,0,0.0116,0.9859,0.0141,0.0
1173_KTN_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",AGCCACTCGT-CCAAGAGGAT,224574149,191235653,33338496,0,0.0075,0.8515,0.1485,0.0
1173_LAF_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GATAGACAAC-GTGTTCACGT,46781141,45899086,882055,0,0.0016,0.9811,0.0189,0.0
1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TGTGATCGCG-AGACGAGTCT,81613010,79454263,2158747,0,0.0027,0.9735,0.0265,0.0
1173_LQD_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ACTCGTCCAG-TGGTCCTCGT,448430593,439918023,8512570,0,0.015,0.981,0.019,0.0
1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ATAGCCGGTT-TCTTATCCGG,545996875,531926641,14070234,0,0.0182,0.9742,0.0258,0.0
1173_LV7_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CACTAGACTT-TGTGGATTAG,339025373,333588923,5436450,0,0.0113,0.984,0.016,0.0
1173_M2F_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GATAGGTGAA-AGACGCAAGA,236584925,230067266,6517659,0,0.0079,0.9725,0.0275,0.0
1173_M4Y_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TAGGTCCAGA-TGCTCATCCG,152303812,139641404,12662408,0,0.0051,0.9169,0.0831,0.0
1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ATCCAGCATG-AGAGCTCTAC,459330898,448427546,10903352,0,0.0154,0.9763,0.0237,0.0
1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TCTACAGCTA-AATGGAAGAC,291926864,286334727,5592137,0,0.0098,0.9808,0.0192,0.0
1173_MHK_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CAATGCGTGT-ATGTTCGCGC,467001291,457645700,9355591,0,0.0156,0.98,0.02,0.0
1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CTTGTTACTG-AATTCGGTGG,203663248,200402137,3261111,0,0.0068,0.984,0.016,0.0
1173_NBF_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCACCGTGGT-TCGCTCTGCT,239310024,235028591,4281433,0,0.008,0.9821,0.0179,0.0
1173_NFO_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CTCTATACTG-CGTTCAACCG,324005525,315030107,8975418,0,0.0108,0.9723,0.0277,0.0
1173_NFO_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CTGAACGTAT-GCCAATACAT,222466527,219060004,3406523,0,0.0074,0.9847,0.0153,0.0
1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AATGGACGCG-AAGTGCACCG,273771686,267109194,6662492,0,0.0092,0.9757,0.0243,0.0
1173_NMN_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CTAGACGAGC-GAGGATGGAT,264024627,259698914,4325713,0,0.0088,0.9836,0.0164,0.0
1173_NWE_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",ATTCGCACTA-TCTGTATGGT,647600390,638980098,8620292,0,0.0216,0.9867,0.0133,0.0
1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GATTGGCGAT-CTGTCTCATT,609856960,596954736,12902224,0,0.0204,0.9788,0.0212,0.0
1173_OHF_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCGCTGAGAG-AATGCTCTAG,4457634,4348107,109527,0,0.0001,0.9754,0.0246,0.0
1173_PCB_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CCAGTATTCT-ACGAAGCGAT,106769183,104946415,1822768,0,0.0036,0.9829,0.0171,0.0
1173_PCB_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",TATACGATGC-CTCCTAATCT,235349608,229366941,5982667,0,0.0079,0.9746,0.0254,0.0
1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCTCCGTACT-AGTTGTGATC,451227269,442790558,8436711,0,0.0151,0.9813,0.0187,0.0
1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GTAATACTCG-CTCACGAATC,251971581,236983193,14988388,0,0.0084,0.9405,0.0595,0.0
1173_QEV_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TGCTTCCAAG-CAGATGTTAC,10424476,10231560,192916,0,0.0003,0.9815,0.0185,0.0
1173_QJL_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TAAGGCTCAC-GACGTTACTT,157409511,154667447,2742064,0,0.0053,0.9826,0.0174,0.0
1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GCATTCCTTC-GAGCCTGCTT,243708764,195668845,48039919,0,0.0081,0.8029,0.1971,0.0
1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GCGCCATATA-GAACCTCCTA,281663000,276277993,5385007,0,0.0094,0.9809,0.0191,0.0
1173_RDM_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CAACCATGAT-ATAAGGTGAC,140421959,138200586,2221373,0,0.0047,0.9842,0.0158,0.0
1173_RGW_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CCTACTCTGC-TGCAATTGGC,110493294,108785358,1707936,0,0.0037,0.9845,0.0155,0.0
1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TGTGACGTAT-GCAGCGTTAG,27864917,27408450,456467,0,0.0009,0.9836,0.0164,0.0
1173_RPC_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",GCGAAGAATT-TCACGGATGA,284668702,279172309,5496393,0,0.0095,0.9807,0.0193,0.0
1173_RPX_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CAACTACCGC-ATGCTGCAGG,359293847,352867276,6426571,0,0.012,0.9821,0.0179,0.0
1173_RQT_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AAGGTCAATG-GCATTATAGG,274602657,270149624,4453033,0,0.0092,0.9838,0.0162,0.0
1173_RQT_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",ATCTAACCTG-CCTGTGGTTC,194994800,190188326,4806474,0,0.0065,0.9754,0.0246,0.0
1173_S9Q_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TCCGGAGAAC-ATTCCTCTGG,303932819,298376911,5555908,0,0.0102,0.9817,0.0183,0.0
1173_SDP_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",TGAGTGTACA-ATTCGCCGGT,363150906,354724978,8425928,0,0.0121,0.9768,0.0232,0.0
1173_SFA_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CGCTAATTGC-CCATCGCATT,35664157,35035346,628811,0,0.0012,0.9824,0.0176,0.0
1173_SK8_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GCACTACCAG-GAAGACTTAG,372836202,363300993,9535209,0,0.0125,0.9744,0.0256,0.0
1173_SK8_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",AGCACCAGTC-CTCGTGTAGC,208199372,202509943,5689429,0,0.007,0.9727,0.0273,0.0
1173_T46_T1_RNA_SLD_01_A23T55JLT4_1,"1,2,3,4,5,6,7,8",GTTCTCATCA-CCTCCATTCT,314730154,309703859,5026295,0,0.0105,0.984,0.016,0.0
1173_T46_T1_RNA_SLD_01_A23T55JLT4_2,"1,2,3,4,5,6,7,8",CGTCGCCTAT-TATCTTCTCG,278186770,257147004,21039766,0,0.0093,0.9244,0.0756,0.0
FFPE_HD789_01_RNA_13_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CTCTCTCTAG-ACTTGATTGG,604274477,591896430,12378047,0,0.0202,0.9795,0.0205,0.0
FFPE_V4_0002_RNA_0001_A23T55JLT4_1,"1,2,3,4,5,6,7,8",AGCCTCTGCT-TTCGCCTTAG,356161534,342100926,14060608,0,0.0119,0.9605,0.0395,0.0
NTC_0001_0001_A23T55JLT4_1,"1,2,3,4,5,6,7,8",CGGATCATTA-CCGTAACCTT,17452,17032,420,0,0.0,0.9759,0.0241,0.0
Undetermined,"1,2,3,4,5,6,7,8",,2069920921,2069920921,0,0,0.0692,1.0,0.0,0.0