File Info
- Filename
- 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
- Size
- 6.6 KB
- Workflow Run
- dev_rna_exp0016-73d51683
- Published
- Jun 08, 2026 5:33 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| RIMKLB--AP000442.1 | 372 | 2 | 372.00 | 1.93 | RIMKLB^ENSG00000166532.16 | 10111 | chr12:8754093:+ | AP000442.1^ENSG00000255139.2 | 26032 | chr11:59620415:+ | ONLY_REF_SPLICE | YES | 679 | 1 | 0.55 | 187.50 | GT | 1.9899 | AG | 1.8062 | 1.2691 | 1518 | 0 |
| RIMKLB--AP000442.1 | 17 | 1 | 17.00 | 0.04 | RIMKLB^ENSG00000166532.16 | 10111 | chr12:8754093:+ | AP000442.1^ENSG00000255139.2 | 28749 | chr11:59639320:+ | ONLY_REF_SPLICE | YES | 679 | 272 | 0.03 | 0.07 | GT | 1.9899 | AG | 1.9899 | 0.0578 | 1943 | 0 |
| RIMKLB--AP000442.1 | 9 | 1 | 9.00 | 0.02 | RIMKLB^ENSG00000166532.16 | 10111 | chr12:8754093:+ | AP000442.1^ENSG00000255139.2 | 27632 | chr11:59635420:+ | ONLY_REF_SPLICE | YES | 679 | 12 | 0.02 | 0.85 | GT | 1.9899 | AG | 1.9086 | 0.0306 | 2019 | 0 |
| TVP23C--CDRT4 | 254 | 0 | 254.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 553 | 26 | 0.46 | 9.44 | GT | 1.8323 | AG | 1.9899 | 0.862 | 2126 | 0 |
| TVP23C--CDRT4 | 169 | 1 | 169.00 | 1.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 129 | 26 | 1.32 | 6.33 | GT | 1.9329 | AG | 1.9899 | 0.577 | 1215 | 0 |
| TVP23C--CDRT4 | 72 | 0 | 72.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 129 | 101 | 0.56 | 0.72 | GT | 1.9329 | AG | 1.6402 | 0.2444 | 137 | 0 |
| TVP23C--CDRT4 | 69 | 0 | 69.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 553 | 101 | 0.13 | 0.69 | GT | 1.8323 | AG | 1.6402 | 0.2342 | 1363 | 0 |
| TVP23C--CDRT4 | 33 | 0 | 33.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 55 | 26 | 0.61 | 1.26 | GT | 1.8892 | AG | 1.9899 | 0.112 | 1949 | 0 |
| TVP23C--CDRT4 | 3 | 0 | 3.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 55 | 101 | 0.07 | 0.04 | GT | 1.8892 | AG | 1.6402 | 0.0102 | 873 | 0 |
| TVP23C--CDRT4 | 2 | 0 | 2.00 | 0.00 | TVP23C^ENSG00000175106.17 | 6853 | chr17:15545785:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 414 | 101 | 0.01 | 0.03 | GT | 1.9086 | AG | 1.6402 | 0.0068 | 697 | 0 |
| TVP23C--CDRT4 | 1 | 0 | 1.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 21051 | chr17:15453085:- | ONLY_REF_SPLICE | YES | 553 | 0 | 0.00 | 2.00 | GT | 1.8323 | AG | 1.8892 | 0.0034 | 1044 | 0 |
| STX16--NPEPL1 | 198 | 1 | 198.00 | 1.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 865 | 100 | 0.23 | 1.98 | GT | 1.7968 | AG | 1.8256 | 0.6754 | 1940 | 0 |
| STX16--NPEPL1 | 3 | 0 | 3.00 | 0.00 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 733 | 100 | 0.01 | 0.04 | GT | 1.8062 | AG | 1.8256 | 0.0102 | 2729 | 0 |
| STX16--NPEPL1 | 2 | 0 | 2.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 19290 | chr20:58693737:+ | ONLY_REF_SPLICE | YES | 865 | 1434 | 0.00 | 0.00 | GT | 1.7968 | AG | 1.7819 | 0.0068 | 1248 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 1835 | chr20:58652087:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1062 | 100 | 0.00 | 0.02 | GT | 1.9899 | AG | 1.8256 | 0.0034 | 1258 | 0 |
| AC015911.9--SLFN12L | 106 | 1 | 106.00 | 0.68 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 6142 | chr17:35480195:- | ONLY_REF_SPLICE | YES | 0 | 71 | 108.00 | 1.50 | GT | 1.9329 | AG | 1.8892 | 0.3621 | 533 | 0 |
| AC015911.9--SLFN12L | 51 | 1 | 51.00 | 0.32 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000286065.2 | 8152 | chr17:35478185:- | ONLY_REF_SPLICE | YES | 0 | 137 | 53.00 | 0.38 | GT | 1.9329 | AG | 1.9329 | 0.1742 | 1380 | 0 |
| AC015911.9--SLFN12L | 3 | 0 | 3.00 | 0.00 | AC015911.9^ENSG00000286030.2 | 1691 | chr17:35522279:- | SLFN12L^ENSG00000205045.11 | 9263 | chr17:35475485:- | ONLY_REF_SPLICE | YES | 0 | 145 | 4.00 | 0.03 | GT | 1.9329 | AG | 1.7968 | 0.0102 | 508 | 0 |
| ZPR1--APOA1 | 103 | 1 | 103.00 | 1.00 | ZPR1^ENSG00000109917.11 | 6882 | chr11:116782158:- | APOA1^ENSG00000118137.10 | 17137 | chr11:116837407:- | ONLY_REF_SPLICE | YES | 186 | 14 | 0.56 | 7.00 | GT | 1.7819 | AG | 1.5546 | 0.353 | 1295 | 0 |
| TLK2P1--AC110079.1 | 103 | 0 | 95.21 | 0.00 | TLK2P1^ENSG00000226049.3 | 1830 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | 8316 | chr4:118595912:+ | INCL_NON_REF_SPLICE | YES | 39 | 20 | 2.60 | 4.95 | GT | 1.7465 | AG | 1.8892 | 0.3231 | 311 | 0 |
| LTBP3--GANAB | 80 | 0 | 80.00 | 0.00 | LTBP3^ENSG00000168056.17 | 6557 | chr11:65551126:- | GANAB^ENSG00000089597.18 | 31022 | chr11:62627353:- | ONLY_REF_SPLICE | YES | 308 | 803 | 0.26 | 0.10 | GT | 1.8892 | AG | 1.7819 | 0.2715 | 605 | 0 |
| TLK2--AC240565.1 | 73 | 0 | 60.79 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 504 | 18 | 0.15 | 3.89 | GT | 1.8892 | AG | 1.8892 | 0.2063 | 1734 | 0 |
| PDXDC2P--NPIPB3 | 67 | 0 | 67.00 | 0.00 | PDXDC2P^ENSG00000255185.6 | 19579 | chr16:70010751:- | NPIPB3^ENSG00000169246.16 | 27289 | chr16:21425378:- | ONLY_REF_SPLICE | YES | 0 | 166 | 68.00 | 0.41 | GT | 1.9329 | AG | 1.9329 | 0.2274 | 5040 | 0 |
| KLRC4--KLRK1 | 53 | 1 | 53.00 | 0.82 | KLRC4^ENSG00000183542.5 | 3122 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | 8583 | chr12:10388875:- | INCL_NON_REF_SPLICE | YES | 29 | 111 | 1.83 | 0.49 | GT | 1.3996 | AG | 1.9219 | 0.1827 | 1207 | 0 |
| KLRC4--KLRK1 | 9 | 1 | 9.00 | 0.14 | KLRC4^ENSG00000183542.5 | 3122 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | 6360 | chr12:10391891:- | INCL_NON_REF_SPLICE | YES | 29 | 0 | 0.37 | 11.00 | GT | 1.3996 | AG | 1.6895 | 0.031 | 3430 | 0 |
| KLRC4--KLRK1 | 3 | 1 | 3.00 | 0.05 | KLRC4^ENSG00000183542.5 | 3122 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | 7431 | chr12:10390027:- | INCL_NON_REF_SPLICE | YES | 29 | 12 | 0.17 | 0.38 | GT | 1.3996 | AG | 1.8323 | 0.0104 | 2359 | 0 |
| IQGAP1--SEMA4B | 38 | 0 | 38.00 | 0.00 | IQGAP1^ENSG00000140575.13 | 20634 | chr15:90467592:+ | SEMA4B^ENSG00000185033.14 | 53459 | chr15:90217439:+ | ONLY_REF_SPLICE | YES | 552 | 513 | 0.07 | 0.08 | GT | 1.7465 | AG | 1.8892 | 0.129 | 1760 | 0 |
| IQGAP1--SEMA4B | 4 | 0 | 4.00 | 0.00 | IQGAP1^ENSG00000140575.13 | 19146 | chr15:90466091:+ | SEMA4B^ENSG00000185033.14 | 53459 | chr15:90217439:+ | ONLY_REF_SPLICE | YES | 1349 | 513 | 0.00 | 0.01 | GT | 1.6402 | AG | 1.8892 | 0.0136 | 1987 | 0 |
| SLC22A20P--EGILA | 17 | 0 | 17.00 | 0.00 | SLC22A20P^ENSG00000197847.12 | 12322 | chr11:65239480:+ | EGILA^ENSG00000258451.1 | 18465 | chr14:20699498:- | ONLY_REF_SPLICE | YES | 0 | 361 | 18.00 | 0.05 | GT | 1.8892 | AG | 1.8062 | 0.0577 | 2712 | 0 |
| SLC22A20P--EGILA | 6 | 0 | 6.00 | 0.00 | SLC22A20P^ENSG00000197847.12 | 12282 | chr11:65239440:+ | EGILA^ENSG00000258451.1 | 18465 | chr14:20699498:- | INCL_NON_REF_SPLICE | YES | 0 | 361 | 7.00 | 0.02 | GT | 1.9656 | AG | 1.8062 | 0.0204 | 2679 | 0 |
| PCDHA6--PCDHAC1 | 13 | 0 | 6.50 | 0.00 | PCDHA6^ENSG00000081842.18 | 3528 | chr5:140830485:+ | PCDHAC1^ENSG00000248383.5 | 12415 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 0 | 0 | 14.00 | 14.00 | GT | 1.9219 | AG | 1.3996 | 0.0221 | 1175 | 0 |
| PCDHA6--PCDHAC2 | 13 | 0 | 6.50 | 0.00 | PCDHA6^ENSG00000081842.18 | 3528 | chr5:140830485:+ | PCDHAC2^ENSG00000243232.6 | 11279 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 0 | 4 | 14.00 | 2.80 | GT | 1.9219 | AG | 1.3996 | 0.0221 | 1069 | 0 |
33 rows