File Info
- Filename
- 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
- Size
- 5.7 KB
- Workflow Run
- dev_rna_exp0016-73d51683
- Published
- Jun 08, 2026 5:33 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| PCDHA6--PCDHAC2 | 458 | 4 | 431.94 | 3.77 | PCDHA6^ENSG00000081842.18 | 3528 | chr5:140830485:+ | PCDHAC2^ENSG00000243232.6 | 11279 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 63 | 128 | 7.23 | 3.59 | GT | 1.9219 | AG | 1.3996 | 1.4774 | 1069 | 0 |
| PCDHA6--PCDHAC1 | 457 | 4 | 26.06 | 0.23 | PCDHA6^ENSG00000081842.18 | 3528 | chr5:140830485:+ | PCDHAC1^ENSG00000248383.5 | 12415 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 63 | 74 | 7.22 | 6.16 | GT | 1.9219 | AG | 1.3996 | 0.0892 | 1175 | 0 |
| PCDHGB2--PCDHGA10 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA10^ENSG00000253846.2 | 12051 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 9 | 331.00 | 33.10 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1890 | 0 |
| PCDHGB2--PCDHGA11 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA11^ENSG00000253873.6 | 11222 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 76 | 331.00 | 4.30 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1018 | 0 |
| PCDHGB2--PCDHGA12 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA12^ENSG00000253159.3 | 10305 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 13 | 331.00 | 23.64 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1413 | 0 |
| PCDHGB2--PCDHGA8 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA8^ENSG00000253767.3 | 14069 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 13 | 331.00 | 23.64 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1419 | 0 |
| PCDHGB2--PCDHGA9 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA9^ENSG00000261934.2 | 10157 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 3 | 331.00 | 82.75 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1493 | 0 |
| PCDHGB2--PCDHGC3 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC3^ENSG00000240184.7 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 487 | 331.00 | 0.68 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1210 | 0 |
| PCDHGB2--PCDHGC4 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC4^ENSG00000242419.5 | 10382 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 0 | 331.00 | 331.00 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1585 | 0 |
| PCDHGB2--PCDHGC5 | 330 | 0 | 41.25 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC5^ENSG00000240764.4 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 9 | 331.00 | 33.10 | GT | 1.7819 | AG | 1.3383 | 0.1399 | 1206 | 0 |
| GUSBP13--NAIP | 163 | 2 | 163.00 | 2.00 | GUSBP13^ENSG00000198237.8 | 5633 | chr5:69920867:+ | NAIP^ENSG00000249437.8 | 14552 | chr5:71003857:- | ONLY_REF_SPLICE | YES | 0 | 145 | 166.00 | 1.14 | GT | 1.9329 | AG | 1.8295 | 0.5595 | 2864 | 0 |
| TLK2P1--AC110079.1 | 120 | 0 | 112.60 | 0.00 | TLK2P1^ENSG00000226049.3 | 1830 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | 8316 | chr4:118595912:+ | INCL_NON_REF_SPLICE | YES | 48 | 32 | 2.47 | 3.67 | GT | 1.7465 | AG | 1.8892 | 0.3818 | 311 | 0 |
| POLR2F--HMGB1 | 116 | 0 | 116.00 | 0.00 | POLR2F^ENSG00000100142.16 | 12042 | chr22:37986312:+ | HMGB1^ENSG00000189403.15 | 25955 | chr13:30463694:- | ONLY_REF_SPLICE | YES | 1621 | 643 | 0.07 | 0.18 | GT | 1.5329 | AG | 1.1033 | 0.3933 | 1252 | 0 |
| CROT--DEFB123 | 101 | 0 | 101.00 | 0.00 | CROT^ENSG00000005469.12 | 1767 | chr7:87346430:+ | DEFB123^ENSG00000180424.7 | 22220 | chr20:31450029:+ | ONLY_REF_SPLICE | YES | 55 | 16 | 1.82 | 6.00 | GT | 1.7465 | AG | 1.9329 | 0.3425 | 1248 | 0 |
| STX16--NPEPL1 | 86 | 1 | 86.00 | 1.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 668 | 38 | 0.13 | 2.26 | GT | 1.7968 | AG | 1.8256 | 0.295 | 1940 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 492 | 38 | 0.00 | 0.05 | GT | 1.8062 | AG | 1.8256 | 0.0034 | 2729 | 0 |
| POLR2F--MXI1 | 80 | 0 | 80.00 | 0.00 | POLR2F^ENSG00000100142.16 | 12042 | chr22:37986312:+ | MXI1^ENSG00000119950.21 | 26543 | chr10:110228189:+ | ONLY_REF_SPLICE | YES | 1623 | 2214 | 0.05 | 0.04 | GT | 1.5329 | AG | 1.9329 | 0.2713 | 593 | 0 |
| TLK2--AC240565.1 | 68 | 1 | 52.40 | 1.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 572 | 98 | 0.12 | 0.71 | GT | 1.8892 | AG | 1.8892 | 0.1811 | 1734 | 0 |
| TTC26--HIPK2 | 68 | 0 | 68.00 | 0.00 | TTC26^ENSG00000105948.13 | 16802 | chr7:139181198:+ | HIPK2^ENSG00000064393.16 | 38974 | chr7:139584064:- | ONLY_REF_SPLICE | YES | 115 | 265 | 0.59 | 0.26 | GT | 1.9219 | AG | 1.8892 | 0.2306 | 3470 | 0 |
| CCDC169--SOHLH2 | 33 | 0 | 33.00 | 0.00 | CCDC169^ENSG00000242715.8 | 10007 | chr13:36248606:- | SOHLH2^ENSG00000120669.16 | 24280 | chr13:36202093:- | ONLY_REF_SPLICE | YES | 14 | 0 | 2.27 | 34.00 | GT | 1.8295 | AG | 1.7232 | 0.1119 | 1362 | 0 |
| POLR2F--CSNK1E | 24 | 0 | 24.00 | 0.00 | POLR2F^ENSG00000100142.16 | 12042 | chr22:37986312:+ | CSNK1E^ENSG00000213923.13 | 24204 | chr22:38314169:- | ONLY_REF_SPLICE | YES | 1624 | 309 | 0.02 | 0.08 | GT | 1.5329 | AG | 1.9086 | 0.0814 | 1041 | 0 |
| SKA2--RNFT1-DT | 21 | 0 | 21.00 | 0.00 | SKA2^ENSG00000182628.13 | 3425 | chr17:59131281:- | RNFT1-DT^ENSG00000267302.5 | 17018 | chr17:59995620:+ | ONLY_REF_SPLICE | YES | 757 | 45 | 0.03 | 0.48 | GT | 1.9086 | AG | 1.7465 | 0.0712 | 3655 | 0 |
| SKA2--RNFT1-DT | 4 | 0 | 4.00 | 0.00 | SKA2^ENSG00000182628.13 | 3420 | chr17:59131286:- | RNFT1-DT^ENSG00000267302.5 | 17103 | chr17:59995705:+ | INCL_NON_REF_SPLICE | YES | 784 | 676 | 0.01 | 0.01 | GT | 1.9329 | AG | 1.9656 | 0.0136 | 3660 | 0 |
| AC092807.3--DDAH1 | 19 | 0 | 19.00 | 0.00 | AC092807.3^ENSG00000282057.1 | 5553 | chr1:85496166:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 18 | 20.00 | 1.05 | GT | 1.5628 | AG | 1.8062 | 0.0644 | 3011 | 0 |
| AC092807.3--DDAH1 | 4 | 0 | 4.00 | 0.00 | AC092807.3^ENSG00000282057.1 | 1267 | chr1:85577984:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 18 | 5.00 | 0.26 | GT | 1.8062 | AG | 1.8062 | 0.0136 | 2484 | 0 |
| AC091132.4--AC103810.6 | 15 | 0 | 15.00 | 0.00 | AC091132.4^ENSG00000267198.1 | 1141 | chr17:45545944:+ | AC103810.6^ENSG00000272134.1 | 11048 | chr17:64881116:+ | INCL_NON_REF_SPLICE | YES | 409 | 5 | 0.04 | 2.67 | GT | 1.5329 | AG | 1.9656 | 0.0509 | 10000 | 0 |
| AC134878.2--FDFT1 | 9 | 0 | 9.00 | 0.00 | AC134878.2^ENSG00000278212.2 | 2148 | chrY:11212744:- | FDFT1^ENSG00000079459.13 | 18337 | chr8:11809667:+ | ONLY_REF_SPLICE | YES | 7 | 3260 | 1.25 | 0.00 | GT | 1.8892 | AG | 1.9899 | 0.0305 | 1777 | 0 |
28 rows