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1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_1.FusionInspector.fusions.abridged.tsv
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12.3 KB
Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 08, 2026 5:56 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
TLK2--AC018638.8 816 0 813.50 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC018638.8^ENSG00000281896.1 40049 chr7:128617868:+ INCL_NON_REF_SPLICE YES 379 18 2.15 43.00 GT 1.8892 AG 1.8892 2.7587 2733 0
MCM9--CCDC162P 666 0 666.00 0.00 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 39824 chr6:109227059:+ ONLY_REF_SPLICE YES 98 0 6.74 667.00 GT 1.8323 AG 1.8892 2.2585 2138 0
MCM9--CCDC162P 70 0 70.00 0.00 MCM9^ENSG00000111877.18 13708 chr6:118911650:- CCDC162P^ENSG00000203799.13 39824 chr6:109227059:+ ONLY_REF_SPLICE YES 333 0 0.21 71.00 GT 1.9899 AG 1.8892 0.2374 773 0
MCM9--CCDC162P 16 0 16.00 0.00 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 39331 chr6:109226566:+ ONLY_REF_SPLICE YES 98 1 0.17 8.50 GT 1.8323 AG 1.0530 0.0543 2220 0
MCM9--CCDC162P 11 0 11.00 0.00 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 43775 chr6:109242179:+ ONLY_REF_SPLICE YES 98 1 0.12 6.00 GT 1.8323 AG 1.9086 0.0373 1265 0
MCM9--CCDC162P 6 0 6.00 0.00 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 42582 chr6:109239328:+ ONLY_REF_SPLICE YES 98 0 0.07 7.00 GT 1.8323 AG 1.8892 0.0203 1745 0
MCM9--CCDC162P 4 0 4.00 0.00 MCM9^ENSG00000111877.18 16091 chr6:118894027:- CCDC162P^ENSG00000203799.13 39824 chr6:109227059:+ ONLY_REF_SPLICE YES 319 0 0.02 5.00 GT 1.3996 AG 1.8892 0.0136 1617 0
MCM9--CCDC162P 1 0 1.00 0.00 MCM9^ENSG00000111877.18 13708 chr6:118911650:- CCDC162P^ENSG00000203799.13 43775 chr6:109242179:+ ONLY_REF_SPLICE YES 333 1 0.01 1.00 GT 1.9899 AG 1.9086 0.0034 2284 0
STX16--NPEPL1 192 0 192.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 336 16 0.57 11.35 GT 1.7968 AG 1.8256 0.6511 1940 0
STX16--NPEPL1 5 0 5.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 336 622 0.02 0.01 GT 1.7968 AG 1.7819 0.017 1248 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 250 16 0.01 0.18 GT 1.8062 AG 1.8256 0.0068 2729 0
HBS1L--LINC01312 168 0 168.00 0.00 HBS1L^ENSG00000112339.15 13372 chr6:134996777:- LINC01312^ENSG00000223586.6 33372 chr6:133821547:+ INCL_NON_REF_SPLICE YES 262 0 0.64 169.00 GT 1.2729 AG 1.9329 0.5697 791 0
HBS1L--LINC01312 6 0 6.00 0.00 HBS1L^ENSG00000112339.15 12752 chr6:134997397:- LINC01312^ENSG00000223586.6 33372 chr6:133821547:+ INCL_NON_REF_SPLICE YES 509 0 0.01 7.00 GT 1.8892 AG 1.9329 0.0203 312 0
TVP23C--CDRT4 162 0 162.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 126 19 1.28 8.15 GT 1.9329 AG 1.9899 0.5494 1215 0
TVP23C--CDRT4 130 0 130.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 387 19 0.34 6.55 GT 1.8323 AG 1.9899 0.4409 2126 0
TVP23C--CDRT4 59 0 59.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 126 127 0.47 0.47 GT 1.9329 AG 1.6402 0.2001 137 0
TVP23C--CDRT4 46 0 46.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 387 127 0.12 0.37 GT 1.8323 AG 1.6402 0.156 1363 0
TVP23C--CDRT4 19 0 19.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 22 19 0.87 1.00 GT 1.8892 AG 1.9899 0.0644 1949 0
TVP23C--CDRT4 13 0 13.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 190 19 0.07 0.70 GT 1.9086 AG 1.9899 0.0441 1774 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 190 127 0.03 0.04 GT 1.9086 AG 1.6402 0.0136 697 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 387 0 0.01 2.00 GT 1.8323 AG 1.8892 0.0034 1044 0
HSP90AB1--SLC35B2 133 0 133.00 0.00 HSP90AB1^ENSG00000096384.20 8098 chr6:44253263:+ SLC35B2^ENSG00000157593.19 13970 chr6:44255644:- INCL_NON_REF_SPLICE YES 1004 277 0.13 0.48 GT 1.6402 AG 1.8295 0.451 282 0
HSP90AB1--SLC35B2 9 0 9.00 0.00 HSP90AB1^ENSG00000096384.20 8096 chr6:44253261:+ SLC35B2^ENSG00000157593.19 13967 chr6:44255647:- INCL_NON_REF_SPLICE YES 1013 262 0.01 0.04 CA 1.6402 AA 1.8892 0.0305 285 0
HSP90AB1--SLC35B2 6 0 6.00 0.00 HSP90AB1^ENSG00000096384.20 8095 chr6:44253260:+ SLC35B2^ENSG00000157593.19 13970 chr6:44255644:- INCL_NON_REF_SPLICE YES 974 277 0.01 0.03 GC 1.6402 AG 1.8295 0.0203 284 0
HNRNPUL1--LIPE-AS1 132 0 132.00 0.00 HNRNPUL1^ENSG00000105323.17 10612 chr19:41279176:+ LIPE-AS1^ENSG00000213904.9 34347 chr19:42485096:+ ONLY_REF_SPLICE YES 255 189 0.52 0.70 GT 1.8062 AG 1.8323 0.4476 1766 0
HNRNPUL1--LIPE-AS1 78 0 78.00 0.00 HNRNPUL1^ENSG00000105323.17 10612 chr19:41279176:+ LIPE-AS1^ENSG00000213904.9 34386 chr19:42485135:+ ONLY_REF_SPLICE YES 255 223 0.31 0.35 GT 1.8062 AG 1.7232 0.2645 1791 0
HNRNPUL1--LIPE-AS1 34 0 34.00 0.00 HNRNPUL1^ENSG00000105323.17 10612 chr19:41279176:+ LIPE-AS1^ENSG00000213904.9 39283 chr19:42651087:+ ONLY_REF_SPLICE YES 255 2 0.14 11.67 GT 1.8062 AG 1.6729 0.1153 2414 0
TLK2P1--AC110079.1 95 0 62.50 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 50 22 1.88 4.17 GT 1.7465 AG 1.8892 0.2119 311 0
ANKRD12--RAB31 78 0 78.00 0.00 ANKRD12^ENSG00000101745.17 1869 chr18:9137096:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ ONLY_REF_SPLICE YES 70 347 1.11 0.23 GT 1.7465 AG 1.7232 0.2645 3319 0
ANKRD12--RAB31 45 0 45.00 0.00 ANKRD12^ENSG00000101745.17 1738 chr18:9136965:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ ONLY_REF_SPLICE YES 43 347 1.05 0.13 GT 1.5058 AG 1.7232 0.1526 3311 0
ANKRD12--RAB31 6 0 6.00 0.00 ANKRD12^ENSG00000101745.17 2646 chr18:9137873:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ ONLY_REF_SPLICE YES 94 347 0.07 0.02 GT 1.9086 AG 1.7232 0.0203 3470 0
ANKRD12--RAB31 3 0 3.00 0.00 ANKRD12^ENSG00000101745.17 1738 chr18:9136965:+ RAB31^ENSG00000168461.13 38677 chr18:9792154:+ ONLY_REF_SPLICE YES 43 313 0.09 0.01 GT 1.5058 AG 1.9219 0.0102 4391 0
ANKRD12--RAB31 3 0 3.00 0.00 ANKRD12^ENSG00000101745.17 1748 chr18:9136975:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ INCL_NON_REF_SPLICE YES 43 347 0.09 0.01 GT 1.7819 AG 1.7232 0.0102 3311 0
ANKRD12--RAB31 1 0 1.00 0.00 ANKRD12^ENSG00000101745.17 1738 chr18:9136965:+ RAB31^ENSG00000168461.13 40908 chr18:9814020:+ ONLY_REF_SPLICE YES 43 305 0.05 0.01 GT 1.5058 AG 1.7232 0.0034 5591 0
LAMA2--CDK19 77 0 77.00 0.00 LAMA2^ENSG00000196569.13 1220 chr6:128883357:+ CDK19^ENSG00000155111.15 83405 chr6:110670541:- ONLY_REF_SPLICE YES 117 433 0.66 0.18 GT 1.7465 AG 1.8892 0.2611 2575 0
PCDHA11--PCDHAC1 77 0 38.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC1^ENSG00000248383.5 12566 chr5:140978949:+ INCL_NON_REF_SPLICE YES 9 4 7.80 15.60 GT 1.7819 AG 1.3996 0.1306 1419 0
PCDHA11--PCDHAC2 77 0 38.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 9 11 7.80 6.50 GT 1.7819 AG 1.3996 0.1306 1466 0
AC092807.3--DDAH1 64 0 64.00 0.00 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 57 65.00 1.12 GT 1.5628 AG 1.8062 0.217 3011 0
AC092807.3--DDAH1 11 0 11.00 0.00 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 57 12.00 0.21 GT 1.8062 AG 1.8062 0.0373 2484 0
AC092807.3--DDAH1 1 0 1.00 0.00 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 19477 chr1:85324883:- ONLY_REF_SPLICE YES 0 139 2.00 0.01 GT 1.5628 AG 1.9219 0.0034 1988 0
AC092807.3--DDAH1 1 0 1.00 0.00 AC092807.3^ENSG00000282057.1 2469 chr1:85576657:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 57 2.00 0.03 GT 1.8892 AG 1.8062 0.0034 2786 0
FNDC3B--SLC7A14-AS1 62 0 62.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 62716 chr3:170708044:+ ONLY_REF_SPLICE YES 3444 5 0.02 10.50 GT 1.9656 AG 1.7465 0.2103 3137 0
FNDC3B--SLC7A14-AS1 15 0 15.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 54893 chr3:170591114:+ ONLY_REF_SPLICE YES 3444 0 0.00 16.00 GT 1.9656 AG 1.9656 0.0509 3328 0
FNDC3B--SLC7A14-AS1 9 0 9.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 68087 chr3:170859983:+ ONLY_REF_SPLICE YES 3444 6 0.00 1.43 GT 1.9656 AG 1.8892 0.0305 2151 0
FNDC3B--SLC7A14-AS1 4 0 4.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 63867 chr3:170725560:+ ONLY_REF_SPLICE YES 3444 5 0.00 0.83 GT 1.9656 AG 1.9329 0.0136 3373 0
SESN1--CLVS2 54 0 54.00 0.00 SESN1^ENSG00000080546.13 2025 chr6:109093795:- CLVS2^ENSG00000146352.13 27066 chr6:123063674:+ ONLY_REF_SPLICE YES 96 14 0.57 3.67 GT 1.9329 AG 1.9086 0.1831 1257 0
NKAIN2--LAMA2 39 0 39.00 0.00 NKAIN2^ENSG00000188580.15 1390 chr6:123804254:+ LAMA2^ENSG00000196569.13 20595 chr6:129049918:+ ONLY_REF_SPLICE YES 6 123 5.71 0.32 GT 1.9656 AG 1.7465 0.1323 2216 0
CCDC162P--AL137009.1 27 0 27.00 0.00 CCDC162P^ENSG00000203799.13 52641 chr6:109348547:+ AL137009.1^ENSG00000253194.2 59892 chr6:119006483:+ ONLY_REF_SPLICE YES 0 80 28.00 0.35 GT 1.7465 AG 1.9219 0.0916 1132 0
CCDC162P--AL137009.1 2 0 2.00 0.00 CCDC162P^ENSG00000203799.13 45127 chr6:109336517:+ AL137009.1^ENSG00000253194.2 59892 chr6:119006483:+ ONLY_REF_SPLICE YES 1 80 1.50 0.04 GT 1.4566 AG 1.9219 0.0068 3523 0
USP49--MDFI 25 0 25.00 0.00 USP49^ENSG00000164663.14 8705 chr6:41871564:- MDFI^ENSG00000112559.15 28195 chr6:41638739:+ ONLY_REF_SPLICE YES 21 2150 1.18 0.01 GT 1.7819 AG 1.7465 0.0848 1330 0
AC136431.1--PKD1P5 24 0 24.00 0.00 AC136431.1^ENSG00000260126.2 1087 chr16:16499619:+ PKD1P5^ENSG00000254681.6 10372 chr16:18395957:- ONLY_REF_SPLICE YES 0 571 25.00 0.04 GT 1.9899 AG 1.8323 0.0814 4688 0
AC136431.1--PKD1P5 4 0 4.00 0.00 AC136431.1^ENSG00000260126.2 1132 chr16:16499664:+ PKD1P5^ENSG00000254681.6 10372 chr16:18395957:- INCL_NON_REF_SPLICE YES 0 571 5.00 0.01 GT 1.9656 AG 1.8323 0.0136 4645 0
LARP4B--LAMA2 21 0 21.00 0.00 LARP4B^ENSG00000107929.15 8420 chr10:863743:- LAMA2^ENSG00000196569.13 34965 chr6:129049918:+ ONLY_REF_SPLICE YES 609 123 0.04 0.18 GT 1.6402 AG 1.7465 0.0712 2349 0
CEP57L1--FIG4 14 0 14.00 0.00 CEP57L1^ENSG00000183137.15 1466 chr6:109095575:+ FIG4^ENSG00000112367.12 81641 chr6:109825088:+ ONLY_REF_SPLICE YES 71 221 0.21 0.07 GT 1.8892 AG 1.7968 0.0475 1290 0
CEP57L1--FIG4 5 0 5.00 0.00 CEP57L1^ENSG00000183137.15 3617 chr6:109106090:+ FIG4^ENSG00000112367.12 81641 chr6:109825088:+ ONLY_REF_SPLICE YES 110 221 0.05 0.03 GT 1.8295 AG 1.7968 0.017 1326 0
KCNK5--SLC2A12 14 0 14.00 0.00 KCNK5^ENSG00000164626.9 4254 chr6:39194169:- SLC2A12^ENSG00000146411.6 16884 chr6:133991308:- ONLY_REF_SPLICE YES 171 217 0.09 0.07 GT 1.7819 AG 1.6729 0.0475 1783 0
PTPRK--PDE7B 13 0 13.00 0.00 PTPRK^ENSG00000152894.15 5860 chr6:128397566:- PDE7B^ENSG00000171408.14 57795 chr6:136147351:+ ONLY_REF_SPLICE YES 515 10 0.03 1.27 GT 1.8062 AG 1.8892 0.0441 4711 0
LINC01524--CDH22 10 0 10.00 0.00 LINC01524^ENSG00000234948.2 28527 chr20:52550127:+ CDH22^ENSG00000149654.11 63601 chr20:46178197:- ONLY_REF_SPLICE YES 0 1 11.00 5.50 GT 1.6402 AG 1.7819 0.0339 2382 0
RPL23AP53--ATP8A2 9 0 9.00 0.00 RPL23AP53^ENSG00000223508.5 1103 chr8:232129:- ATP8A2^ENSG00000132932.18 37085 chr13:25699173:+ ONLY_REF_SPLICE YES 1 2 5.00 3.33 GT 1.9086 AG 1.5656 0.0305 4939 0
RPL23AP53--ATP8A2 4 0 4.00 0.00 RPL23AP53^ENSG00000223508.5 4131 chr8:219290:- ATP8A2^ENSG00000132932.18 37085 chr13:25699173:+ ONLY_REF_SPLICE YES 2 2 1.67 1.67 GT 1.8323 AG 1.5656 0.0136 2558 0
RPL23AP53--ATP8A2 2 0 2.00 0.00 RPL23AP53^ENSG00000223508.5 2207 chr8:230804:- ATP8A2^ENSG00000132932.18 37085 chr13:25699173:+ ONLY_REF_SPLICE YES 1 2 1.50 1.00 GT 1.9329 AG 1.5656 0.0068 3970 0
62 rows