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1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/starfusion/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 08, 2026 6:56 AM

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 265
Pass (CALL=1): 16 (6.0%)
Fail (CALL=0): 249 (94.0%)

Blacklist Flagging:
  Total blacklisted: 82
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 8: 99
  Excluded SpliceType: INCL_NON_REF_SPLICE: 55
  Blacklisted: 38
  aih_curated_blacklist score(3): 22
  Blacklisted; aih_curated_blacklist score(3): 20
  Read count too low: 6 < 8: 7
  Read count too low: 7 < 8: 3
  Read count too low: 2 < 8: 3
  aih_curated_blacklist score(6): 1
  aih_curated_blacklist score(5): 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 7 pass, 137 fail (total: 144)
  ONLY_REF_SPLICE: 9 pass, 112 fail (total: 121)