File Info
- Filename
- 1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 9.7 KB
- Workflow Run
- dev_rna_exp0016-73d51683
- Published
- Jun 08, 2026 8:02 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| PCDHA6--PCDHAC2 | 328 | 0 | 328.00 | 0.00 | PCDHA6^ENSG00000081842.18 | 3528 | chr5:140830485:+ | PCDHAC2^ENSG00000243232.6 | 11279 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 50 | 119 | 6.45 | 2.74 | GT | 1.9219 | AG | 1.3996 | 1.2333 | 1069 | 0 |
| PCDHGB2--PCDHGA10 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA10^ENSG00000253846.2 | 12051 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 8 | 244.00 | 27.11 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1890 | 0 |
| PCDHGB2--PCDHGA11 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA11^ENSG00000253873.6 | 11222 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 86 | 244.00 | 2.80 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1018 | 0 |
| PCDHGB2--PCDHGA12 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA12^ENSG00000253159.3 | 10305 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 2 | 244.00 | 81.33 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1413 | 0 |
| PCDHGB2--PCDHGA8 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA8^ENSG00000253767.3 | 14069 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 10 | 244.00 | 22.18 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1419 | 0 |
| PCDHGB2--PCDHGA9 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGA9^ENSG00000261934.2 | 10157 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 2 | 244.00 | 81.33 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1493 | 0 |
| PCDHGB2--PCDHGC3 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC3^ENSG00000240184.7 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 286 | 244.00 | 0.85 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1210 | 0 |
| PCDHGB2--PCDHGC4 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC4^ENSG00000242419.5 | 10382 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 2 | 244.00 | 81.33 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1585 | 0 |
| PCDHGB2--PCDHGC5 | 243 | 0 | 30.38 | 0.00 | PCDHGB2^ENSG00000253910.2 | 3515 | chr5:141362556:+ | PCDHGC5^ENSG00000240764.4 | 10438 | chr5:141494807:+ | INCL_NON_REF_SPLICE | YES | 0 | 4 | 244.00 | 48.80 | GT | 1.7819 | AG | 1.3383 | 0.1142 | 1206 | 0 |
| GUSBP13--NAIP | 141 | 1 | 141.00 | 1.00 | GUSBP13^ENSG00000198237.8 | 5633 | chr5:69920867:+ | NAIP^ENSG00000249437.8 | 14552 | chr5:71003857:- | ONLY_REF_SPLICE | YES | 0 | 132 | 143.00 | 1.08 | GT | 1.9329 | AG | 1.8295 | 0.534 | 2864 | 0 |
| PCDHA11--PCDHAC1 | 116 | 1 | 116.00 | 1.00 | PCDHA11^ENSG00000249158.7 | 4312 | chr5:140871494:+ | PCDHAC1^ENSG00000248383.5 | 12566 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 108 | 59 | 1.08 | 1.97 | GT | 1.7819 | AG | 1.3996 | 0.44 | 1419 | 0 |
| PCDHA11--PCDHAC1 | 17 | 0 | 17.00 | 0.00 | PCDHA11^ENSG00000249158.7 | 3520 | chr5:140870702:+ | PCDHAC1^ENSG00000248383.5 | 12566 | chr5:140978949:+ | INCL_NON_REF_SPLICE | YES | 107 | 59 | 0.17 | 0.30 | GT | 1.9656 | AG | 1.3996 | 0.0639 | 1208 | 0 |
| TLK2P1--AC110079.1 | 108 | 0 | 108.00 | 0.00 | TLK2P1^ENSG00000226049.3 | 1830 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | 8316 | chr4:118595912:+ | INCL_NON_REF_SPLICE | YES | 58 | 34 | 1.85 | 3.11 | GT | 1.7465 | AG | 1.8892 | 0.4061 | 311 | 0 |
| POLR2F--HMGB1 | 86 | 0 | 86.00 | 0.00 | POLR2F^ENSG00000100142.16 | 12042 | chr22:37986312:+ | HMGB1^ENSG00000189403.15 | 25955 | chr13:30463694:- | ONLY_REF_SPLICE | YES | 908 | 634 | 0.10 | 0.14 | GT | 1.5329 | AG | 1.1033 | 0.3234 | 1252 | 0 |
| TTC26--HIPK2 | 85 | 0 | 85.00 | 0.00 | TTC26^ENSG00000105948.13 | 16802 | chr7:139181198:+ | HIPK2^ENSG00000064393.16 | 38974 | chr7:139584064:- | ONLY_REF_SPLICE | YES | 96 | 243 | 0.89 | 0.35 | GT | 1.9219 | AG | 1.8892 | 0.3196 | 3470 | 0 |
| CROT--DEFB123 | 75 | 2 | 75.00 | 2.00 | CROT^ENSG00000005469.12 | 1767 | chr7:87346430:+ | DEFB123^ENSG00000180424.7 | 22220 | chr20:31450029:+ | ONLY_REF_SPLICE | YES | 47 | 20 | 1.62 | 3.71 | GT | 1.7465 | AG | 1.9329 | 0.2895 | 1248 | 0 |
| STX16--NPEPL1 | 71 | 1 | 71.00 | 1.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 549 | 18 | 0.13 | 3.84 | GT | 1.7968 | AG | 1.8256 | 0.2708 | 1940 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 403 | 18 | 0.00 | 0.11 | GT | 1.8062 | AG | 1.8256 | 0.0038 | 2729 | 0 |
| TAS2R14--PRR4 | 70 | 3 | 70.00 | 2.87 | TAS2R14^ENSG00000212127.6 | 4492 | chr12:10973655:- | PRR4^ENSG00000111215.12 | 11417 | chr12:10848407:- | ONLY_REF_SPLICE | YES | 88 | 40 | 0.83 | 1.80 | GT | 1.9329 | AG | 1.8062 | 0.274 | 1599 | 0 |
| TAS2R14--PRR4 | 36 | 0 | 36.00 | 0.00 | TAS2R14^ENSG00000212127.6 | 1152 | chr12:11171422:- | PRR4^ENSG00000111215.12 | 11417 | chr12:10848407:- | ONLY_REF_SPLICE | YES | 712 | 40 | 0.05 | 0.90 | GT | 1.8256 | AG | 1.8062 | 0.1354 | 2542 | 0 |
| TAS2R14--PRR4 | 11 | 1 | 11.00 | 0.13 | TAS2R14^ENSG00000212127.6 | 3425 | chr12:11034782:- | PRR4^ENSG00000111215.12 | 11417 | chr12:10848407:- | ONLY_REF_SPLICE | YES | 59 | 40 | 0.22 | 0.32 | GT | 1.6402 | AG | 1.8062 | 0.0419 | 1181 | 0 |
| TAS2R14--PRR4 | 10 | 0 | 10.00 | 0.00 | TAS2R14^ENSG00000212127.6 | 2321 | chr12:11047020:- | PRR4^ENSG00000111215.12 | 11417 | chr12:10848407:- | ONLY_REF_SPLICE | YES | 83 | 40 | 0.13 | 0.27 | GT | 1.9086 | AG | 1.8062 | 0.0376 | 1602 | 0 |
| POLR2F--MXI1 | 51 | 0 | 51.00 | 0.00 | POLR2F^ENSG00000100142.16 | 12042 | chr22:37986312:+ | MXI1^ENSG00000119950.21 | 26543 | chr10:110228189:+ | ONLY_REF_SPLICE | YES | 909 | 1932 | 0.06 | 0.03 | GT | 1.5329 | AG | 1.9329 | 0.1918 | 593 | 0 |
| TCEAL4--MTRNR2L12 | 40 | 0 | 40.00 | 0.00 | TCEAL4^ENSG00000133142.18 | 4340 | chrX:103586848:+ | MTRNR2L12^ENSG00000269028.3 | 9006 | chr3:96617452:- | INCL_NON_REF_SPLICE | YES | 1138 | 5 | 0.04 | 6.83 | GT | 1.4295 | AG | 1.2419 | 0.1504 | 516 | 0 |
| TCEAL4--MTRNR2L12 | 3 | 0 | 3.00 | 0.00 | TCEAL4^ENSG00000133142.18 | 4212 | chrX:103586720:+ | MTRNR2L12^ENSG00000269028.3 | 8344 | chr3:96618114:- | INCL_NON_REF_SPLICE | YES | 2171 | 0 | 0.00 | 4.00 | GG | 1.8892 | AG | 1.3383 | 0.0113 | 754 | 0 |
| SKA2--RNFT1-DT | 33 | 1 | 33.00 | 1.00 | SKA2^ENSG00000182628.13 | 3425 | chr17:59131281:- | RNFT1-DT^ENSG00000267302.5 | 17018 | chr17:59995620:+ | ONLY_REF_SPLICE | YES | 709 | 33 | 0.05 | 1.03 | GT | 1.9086 | AG | 1.7465 | 0.1279 | 3655 | 0 |
| SKA2--RNFT1-DT | 4 | 0 | 4.00 | 0.00 | SKA2^ENSG00000182628.13 | 3420 | chr17:59131286:- | RNFT1-DT^ENSG00000267302.5 | 17103 | chr17:59995705:+ | INCL_NON_REF_SPLICE | YES | 734 | 602 | 0.01 | 0.01 | GT | 1.9329 | AG | 1.9656 | 0.015 | 3660 | 0 |
| CCDC169--SOHLH2 | 22 | 0 | 22.00 | 0.00 | CCDC169^ENSG00000242715.8 | 10007 | chr13:36248606:- | SOHLH2^ENSG00000120669.16 | 24280 | chr13:36202093:- | ONLY_REF_SPLICE | YES | 12 | 1 | 1.77 | 11.50 | GT | 1.8295 | AG | 1.7232 | 0.0827 | 1362 | 0 |
| AC092807.3--DDAH1 | 19 | 0 | 19.00 | 0.00 | AC092807.3^ENSG00000282057.1 | 5553 | chr1:85496166:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 19 | 20.00 | 1.00 | GT | 1.5628 | AG | 1.8062 | 0.0714 | 3011 | 0 |
| AC092807.3--DDAH1 | 2 | 0 | 2.00 | 0.00 | AC092807.3^ENSG00000282057.1 | 1267 | chr1:85577984:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 19 | 3.00 | 0.15 | GT | 1.8062 | AG | 1.8062 | 0.0075 | 2484 | 0 |
| AC092807.3--DDAH1 | 1 | 0 | 1.00 | 0.00 | AC092807.3^ENSG00000282057.1 | 9402 | chr1:85488291:- | DDAH1^ENSG00000153904.21 | 16212 | chr1:85358847:- | ONLY_REF_SPLICE | YES | 0 | 19 | 2.00 | 0.10 | GT | 1.8892 | AG | 1.8062 | 0.0038 | 2892 | 0 |
| POLR2F--GNAS | 17 | 0 | 17.00 | 0.00 | POLR2F^ENSG00000100142.16 | 12042 | chr22:37986312:+ | GNAS^ENSG00000087460.28 | 37713 | chr20:58895612:+ | ONLY_REF_SPLICE | YES | 910 | 7373 | 0.02 | 0.00 | GT | 1.5329 | AG | 1.8892 | 0.0639 | 1225 | 0 |
| RPL14--ATN1 | 9 | 0 | 9.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | ATN1^ENSG00000111676.15 | 19473 | chr12:6936765:+ | INCL_NON_REF_SPLICE | YES | 1261 | 1165 | 0.01 | 0.01 | GT | 1.6895 | AG | 1.7819 | 0.0338 | 796 | 0 |
| RPL14--ATN1 | 4 | 0 | 4.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | ATN1^ENSG00000111676.15 | 19467 | chr12:6936759:+ | INCL_NON_REF_SPLICE | YES | 1261 | 1207 | 0.00 | 0.00 | GT | 1.6895 | AG | 1.5850 | 0.015 | 796 | 0 |
| RPL14--ATN1 | 4 | 0 | 4.00 | 0.00 | RPL14^ENSG00000188846.14 | 4462 | chr3:40462003:+ | ATN1^ENSG00000111676.15 | 19467 | chr12:6936759:+ | INCL_NON_REF_SPLICE | YES | 1722 | 1207 | 0.00 | 0.00 | CA | 1.8892 | AG | 1.5850 | 0.015 | 808 | 0 |
| RPL14--ATN1 | 4 | 0 | 4.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | ATN1^ENSG00000111676.15 | 19470 | chr12:6936762:+ | INCL_NON_REF_SPLICE | YES | 1261 | 1187 | 0.00 | 0.00 | GT | 1.6895 | AG | 1.8256 | 0.015 | 798 | 0 |
| RPL14--MAML2 | 7 | 1 | 7.00 | 0.50 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | MAML2^ENSG00000184384.14 | 18165 | chr11:96092215:- | INCL_NON_REF_SPLICE | YES | 1259 | 1021 | 0.01 | 0.01 | GT | 1.6895 | AG | 1.5656 | 0.0282 | 1153 | 0 |
| RPL14--MAML2 | 4 | 1 | 4.00 | 0.29 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | MAML2^ENSG00000184384.14 | 18162 | chr11:96092218:- | INCL_NON_REF_SPLICE | YES | 1259 | 997 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.5656 | 0.0161 | 1150 | 0 |
| RPL14--MAML2 | 4 | 0 | 4.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | MAML2^ENSG00000184384.14 | 18168 | chr11:96092212:- | INCL_NON_REF_SPLICE | YES | 1259 | 1024 | 0.00 | 0.00 | GT | 1.6895 | AG | 1.5656 | 0.015 | 1156 | 0 |
| RPL14--MAML2 | 3 | 1 | 3.00 | 0.21 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | MAML2^ENSG00000184384.14 | 18159 | chr11:96092221:- | INCL_NON_REF_SPLICE | YES | 1259 | 998 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.5656 | 0.0121 | 1148 | 0 |
| RPL14--MAML2 | 3 | 0 | 3.00 | 0.00 | RPL14^ENSG00000188846.14 | 4439 | chr3:40461980:+ | MAML2^ENSG00000184384.14 | 18161 | chr11:96092219:- | INCL_NON_REF_SPLICE | YES | 2438 | 993 | 0.00 | 0.00 | GC | 1.7232 | CA | 1.5656 | 0.0113 | 1165 | 0 |
| AC134878.2--AK6 | 7 | 0 | 7.00 | 0.00 | AC134878.2^ENSG00000278212.2 | 2148 | chrY:11212744:- | AK6^ENSG00000085231.14 | 14131 | chr5:69366595:- | ONLY_REF_SPLICE | YES | 3 | 359 | 2.00 | 0.02 | GT | 1.8892 | AG | 1.9219 | 0.0263 | 2940 | 0 |
| RPL14--E2F4 | 5 | 0 | 5.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | E2F4^ENSG00000205250.9 | 17819 | chr16:67195927:+ | INCL_NON_REF_SPLICE | YES | 1261 | 709 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.7465 | 0.0188 | 1092 | 0 |
| RPL14--E2F4 | 3 | 0 | 3.00 | 0.00 | RPL14^ENSG00000188846.14 | 4439 | chr3:40461980:+ | E2F4^ENSG00000205250.9 | 17812 | chr16:67195920:+ | INCL_NON_REF_SPLICE | YES | 2439 | 713 | 0.00 | 0.01 | GC | 1.7232 | CA | 1.5656 | 0.0113 | 1127 | 0 |
| RPL14--EP400 | 5 | 0 | 5.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | EP400^ENSG00000183495.14 | 55569 | chr12:132062582:+ | INCL_NON_REF_SPLICE | YES | 1259 | 591 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.5656 | 0.0188 | 922 | 0 |
| RPL14--EP400 | 4 | 0 | 4.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | EP400^ENSG00000183495.14 | 55566 | chr12:132062579:+ | INCL_NON_REF_SPLICE | YES | 1259 | 597 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.5656 | 0.015 | 921 | 0 |
| RPL14--EP400 | 3 | 0 | 3.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | EP400^ENSG00000183495.14 | 55575 | chr12:132062588:+ | INCL_NON_REF_SPLICE | YES | 1259 | 585 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.5656 | 0.0113 | 924 | 0 |
| RPL14--MPRIP | 5 | 0 | 5.00 | 0.00 | RPL14^ENSG00000188846.14 | 4476 | chr3:40462017:+ | MPRIP^ENSG00000133030.22 | 22887 | chr17:17136278:+ | INCL_NON_REF_SPLICE | YES | 1261 | 915 | 0.00 | 0.01 | GT | 1.6895 | AG | 1.8295 | 0.0188 | 489 | 0 |
49 rows