File Info
- Filename
- 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2.fusions.csv
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- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/fusionreport/1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2/1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2.fusions.csv
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- Workflow Run
- dev_rna_exp0016-73d51683
- Published
- Jun 08, 2026 8:46 AM
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| MTAP--CDKN2B-AS1 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr9:21838010:+#chr9:22112320:+,junction_reads: 73,spanning_reads: 0,ffmp: 0.2477 | |
| COL1A1--SLC45A4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:50189867:-#chr8:141254178:-,junction_reads: 70,spanning_reads: 0,ffmp: 0.2376 | ||
| B4GALT6--DSC3 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr18:31684312#chr18:30994372,reading-frame: out-of-frame,type: deletion,split_reads1: 40,split_reads2: 15,discordant_mates: 0,coverage1: 1868,coverage2: 1133,confidence: high | position: chr18:31684312:-#chr18:30994372:-,junction_reads: 56,spanning_reads: 0,ffmp: 0.1901 | |
| TMEM65--ANXA13 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr8:124371854#chr8:123684722,reading-frame: in-frame,type: deletion,split_reads1: 43,split_reads2: 10,discordant_mates: 0,coverage1: 1417,coverage2: 76,confidence: high | position: chr8:124371854:-#chr8:123684722:-,junction_reads: 53,spanning_reads: 0,ffmp: 0.1799 | |
| TMEM123--PDGFD | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102448812:-#chr11:104000255:-,junction_reads: 41,spanning_reads: 0,ffmp: 0.1391 | ||
| PDCD1LG2--DYNC2H1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050:+#chr11:103114103:+,junction_reads: 40,spanning_reads: 1,ffmp: 0.138 | ||
| RPSAP52--HMGA2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr12:65826843:-#chr12:65828001:+,junction_reads: 36,spanning_reads: 0,ffmp: 0.1222 | |
| AP001021.1--YAP1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr18:5896086:+#chr11:102162456:+,junction_reads: 36,spanning_reads: 0,ffmp: 0.1222 | ||
| YAP1--PDGFD | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102162571:+#chr11:104000255:-,junction_reads: 35,spanning_reads: 1,ffmp: 0.1215 | ||
| CLTC--VMP1 | Mitelman,FusionGDB2 | 0.312 | 0.5 * (0.125) + 0.5 * (0.500 + 0.000) | position: chr17:59690711:+#chr17:59838295:+,junction_reads: 32,spanning_reads: 0,ffmp: 0.1086 | |
| TBC1D13--AL442224.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr9:128792574#chr9:93825711,reading-frame: out-of-frame,type: duplication,split_reads1: 19,split_reads2: 10,discordant_mates: 0,coverage1: 906,coverage2: 11,confidence: high | position: chr9:128792574:+#chr9:93825711:+,junction_reads: 31,spanning_reads: 0,ffmp: 0.1052 | |
| AL033504.1--SASH1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr6:147947519#chr6:148390134,reading-frame: .,type: deletion,split_reads1: 8,split_reads2: 23,discordant_mates: 1,coverage1: 13,coverage2: 705,confidence: high | position: chr6:147947519:+#chr6:148390134:+,junction_reads: 31,spanning_reads: 1,ffmp: 0.1086 | |
| CDV3--MT-RNR2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr3:133575115:+#chrM:2449:+,junction_reads: 30,spanning_reads: 0,ffmp: 0.1018 | ||
| TMEM123--DYNC2H1 | Mitelman | 0.312 | 0.5 * (0.125) + 0.5 * (0.500) | position: chr11:102448812:-#chr11:103280348:+,junction_reads: 26,spanning_reads: 0,ffmp: 0.0882 | |
| SH3BP5--AC002074.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr3:15304103#chr7:94279390,reading-frame: out-of-frame,type: translocation,split_reads1: 21,split_reads2: 2,discordant_mates: 0,coverage1: 1572,coverage2: 1,confidence: high | position: chr3:15304103:-#chr7:94279390:-,junction_reads: 26,spanning_reads: 0,ffmp: 0.0882 | |
| YAP1--MUC12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102186131:+#chr7:101018595:+,junction_reads: 25,spanning_reads: 0,ffmp: 0.0848 | ||
| TMEM123--YAP1 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr11:102448812:-#chr11:102114144:+,junction_reads: 23,spanning_reads: 0,ffmp: 0.0781 | |
| AC239859.5--AC013734.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:143419625:-#chrY:26453985:+,junction_reads: 23,spanning_reads: 0,ffmp: 0.0256 | ||
| SRGAP2C--FCGR1B | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:121324640:+#chr1:121092996:+,junction_reads: 20,spanning_reads: 0,ffmp: 0.0679 | ||
| BIRC3--PDGFD | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102317571:+#chr11:104000255:-,junction_reads: 19,spanning_reads: 0,ffmp: 0.0645 | ||
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 18,spanning_reads: 0,ffmp: 0.0573 | ||
| PTPRM--TTC39C | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr18:7567891:+#chr18:24064140:+,junction_reads: 18,spanning_reads: 0,ffmp: 0.0611 | ||
| EIF4H--COL1A2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr7:74195439:+#chr7:94412068:+,junction_reads: 15,spanning_reads: 1,ffmp: 0.0543 | ||
| TPTE--BAGE2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr21:10527412:+#chr21:10514122:+,junction_reads: 12,spanning_reads: 0,ffmp: 0.0202 | ||
| TMEFF2--TEX41 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr2:191998262:-#chr2:144667969:+,junction_reads: 11,spanning_reads: 0,ffmp: 0.0373 | ||
| PDGFD--DYNC2H1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:103926912:-#chr11:103468589:+,junction_reads: 11,spanning_reads: 1,ffmp: 0.0407 | ||
| TMEM123--PPP2R2C | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:102448812:-#chr4:6381094:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0339 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.004 | ||
| FLG-AS1--ARHGAP32 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:152251758:+#chr11:128998468:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.0305 | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * (0.000) | position: chr17:15540433#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 177,split_reads2: 92,discordant_mates: 1,coverage1: 5145,coverage2: 1107,confidence: high | position: chr17:15503098:-#chr17:15438200:-,junction_reads: 8,spanning_reads: 0,ffmp: 0.0272 |
| NUP214--AP000851.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:131130836#chr11:102657665,reading-frame: out-of-frame,type: translocation,split_reads1: 230,split_reads2: 142,discordant_mates: 4,coverage1: 1665,coverage2: 203,confidence: high | ||
| NUP214--AP000851.2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:131130836#chr11:102657665,reading-frame: out-of-frame,type: translocation,split_reads1: 230,split_reads2: 142,discordant_mates: 4,coverage1: 1665,coverage2: 203,confidence: high | ||
| AC092807.3--DDAH1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:85496166#chr1:85358847,reading-frame: .,type: deletion/read-through,split_reads1: 54,split_reads2: 152,discordant_mates: 3,coverage1: 266,coverage2: 1261,confidence: high | ||
| UGDH--UGDH | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr4:39503875#chr4:39510861,reading-frame: in-frame,type: duplication/non-canonical_splicing,split_reads1: 67,split_reads2: 98,discordant_mates: 0,coverage1: 3739,coverage2: 2493,confidence: high | ||
| RCC2--CPS1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:17438230#chr2:211081489,reading-frame: out-of-frame,type: translocation,split_reads1: 26,split_reads2: 29,discordant_mates: 0,coverage1: 2248,coverage2: 35,confidence: high | ||
| RCC2--AC012491.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:17438230#chr2:211081489,reading-frame: out-of-frame,type: translocation,split_reads1: 26,split_reads2: 29,discordant_mates: 0,coverage1: 2248,coverage2: 35,confidence: high | ||
| AC015911.9--SLFN12L | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:35522279#chr17:35480195,reading-frame: .,type: deletion/read-through,split_reads1: 7,split_reads2: 11,discordant_mates: 1,coverage1: 211,coverage2: 123,confidence: high | ||
| AC245297.3--SEC22B3P | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:149177212#chr1:148779001,reading-frame: .,type: inversion,split_reads1: 8,split_reads2: 8,discordant_mates: 0,coverage1: 644,coverage2: 400,confidence: high | ||
| PDCD1LG2--AP001830.2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050#chr11:102508782,reading-frame: out-of-frame,type: translocation,split_reads1: 15,split_reads2: 1,discordant_mates: 0,coverage1: 999,coverage2: 1,confidence: high | ||
| PDCD1LG2--MMP7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050#chr11:102508782,reading-frame: out-of-frame,type: translocation,split_reads1: 15,split_reads2: 1,discordant_mates: 0,coverage1: 999,coverage2: 1,confidence: high | ||
| LINC01429--SALL4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:51862825#chr20:51792352,reading-frame: .,type: deletion/read-through,split_reads1: 3,split_reads2: 12,discordant_mates: 0,coverage1: 18,coverage2: 203,confidence: high | ||
| AP001347.1--ANKRD20A11P | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr21:14027597#chr21:13970110,reading-frame: .,type: inversion,split_reads1: 11,split_reads2: 2,discordant_mates: 0,coverage1: 219,coverage2: 7,confidence: high | ||
| AC093815.1--UGT8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr4:114490929#chr4:114622879,reading-frame: .,type: deletion/read-through,split_reads1: 4,split_reads2: 8,discordant_mates: 0,coverage1: 15,coverage2: 158,confidence: high | ||
| UGT8--UGT8 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr4:114490929#chr4:114622879,reading-frame: .,type: deletion/read-through,split_reads1: 4,split_reads2: 8,discordant_mates: 0,coverage1: 15,coverage2: 158,confidence: high | |
| GLIS3--PDGFD | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:4286038#chr11:104193784,reading-frame: out-of-frame,type: translocation,split_reads1: 7,split_reads2: 3,discordant_mates: 1,coverage1: 753,coverage2: 24,confidence: high | ||
| GLIS3--AP003304.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:4286038#chr11:104193784,reading-frame: out-of-frame,type: translocation,split_reads1: 7,split_reads2: 3,discordant_mates: 1,coverage1: 753,coverage2: 24,confidence: high | ||
| PDGFD--MMP20 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:104001244#chr11:102579142,reading-frame: .,type: inversion/3'-3',split_reads1: 1,split_reads2: 10,discordant_mates: 0,coverage1: 2,coverage2: 123,confidence: high | ||
| PDCD1LG2--OR5AP2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050#chr11:56659462,reading-frame: out-of-frame,type: translocation,split_reads1: 9,split_reads2: 1,discordant_mates: 0,coverage1: 999,coverage2: 2,confidence: high | ||
| PDCD1LG2--OR5AR1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr9:5535050#chr11:56659462,reading-frame: out-of-frame,type: translocation,split_reads1: 9,split_reads2: 1,discordant_mates: 0,coverage1: 999,coverage2: 2,confidence: high |
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